Guide to the Human Genome
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Name: MCM5 Sequence: fasta or formatted (734aa) NCBI GI: 23510448
Description:

minichromosome maintenance complex component 5

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         58           3
 C cysteine            1.9         14           1
 D aspartate           6.5         48           2
 E glutamate           6.9         51           4
 F phenylalanine       3.8         28           1
 G glycine             6.9         51           2
 H histidine           1.9         14           1
 I isoleucine          6.7         49           3
 K lysine              6.4         47           2
 L leucine             8.6         63           2
 M methionine          3.4         25           2
 N asparagine          1.8         13           1
 P proline             3.8         28           1
 Q glutamine           4.5         33           2
 R arginine            8.2         60           2
 S serine              7.5         55           2
 T threonine           4.5         33           3
 V valine              5.9         43           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   minichromosome maintenance complex component 5 [Homo... 
MCM4                  0.212   minichromosome maintenance complex component 4 [Homo...
MCM4                  0.212   minichromosome maintenance complex component 4 [Homo...
MCM2                  0.210   minichromosome maintenance complex component 2 [Homo...
MCM7                  0.200   minichromosome maintenance complex component 7 isofo...
MCM6                  0.187   minichromosome maintenance complex component 6 
MCM3                  0.186   minichromosome maintenance complex component 3 
MCM7                  0.181   minichromosome maintenance complex component 7 isofo...
MCM8                  0.156   minichromosome maintenance complex component 8 isofo...
MCM8                  0.155   minichromosome maintenance complex component 8 isofo...
MCM9                  0.058   minichromosome maintenance complex component 9 [Homo...
SLIT1                 0.007   slit homolog 1 
COG7                  0.006   component of oligomeric golgi complex 7 
TOP2B                 0.006   DNA topoisomerase II, beta isozyme 
DST                   0.006   dystonin isoform 4 
DST                   0.006   dystonin isoform 3 
DST                   0.006   dystonin isoform 2 
DST                   0.006   dystonin isoform 1 
DST                   0.006   dystonin isoform 1eA precursor 
CARD10                0.006   caspase recruitment domain protein 10 
TRIM47                0.005   tripartite motif-containing 47 
MACROD1               0.005   MACRO domain containing 1 
STAG2                 0.005   stromal antigen 2 isoform b 
STAG2                 0.005   stromal antigen 2 isoform b 
STAG2                 0.005   stromal antigen 2 isoform a 
STAG2                 0.005   stromal antigen 2 isoform a 
CWF19L2               0.005   CWF19-like 2, cell cycle control 
SDHAF1                0.004   succinate dehydrogenase complex assembly factor 1 [...
SPAST                 0.004   spastin isoform 2 
SPAST                 0.004   spastin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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