Guide to the Human Genome
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Name: MCM8 Sequence: fasta or formatted (840aa) NCBI GI: 19923727
Description:

minichromosome maintenance complex component 8 isoform 1

Referenced in:

Replication Proteins

Other entries for this name:
alt prot [824aa] minichromosome maintenance complex component 8 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         56           3
 C cysteine            1.8         15           1
 D aspartate           5.0         42           2
 E glutamate           7.0         59           2
 F phenylalanine       3.6         30           2
 G glycine             7.3         61           3
 H histidine           2.3         19           2
 I isoleucine          5.8         49           2
 K lysine              6.2         52           2
 L leucine            10.1         85           2
 M methionine          2.3         19           1
 N asparagine          4.3         36           2
 P proline             3.9         33           1
 Q glutamine           4.9         41           2
 R arginine            6.1         51           1
 S serine              7.9         66           3
 T threonine           5.7         48           4
 V valine              5.7         48           2
 W tryptophan          0.5          4           1
 Y tyrosine            3.1         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   minichromosome maintenance complex component 8 isofo... 
MCM8                  0.973   minichromosome maintenance complex component 8 isofo...
MCM2                  0.171   minichromosome maintenance complex component 2 [Homo...
MCM4                  0.164   minichromosome maintenance complex component 4 [Homo...
MCM4                  0.164   minichromosome maintenance complex component 4 [Homo...
MCM7                  0.144   minichromosome maintenance complex component 7 isofo...
MCM6                  0.140   minichromosome maintenance complex component 6 
MCM5                  0.134   minichromosome maintenance complex component 5 [Homo...
MCM3                  0.130   minichromosome maintenance complex component 3 
MCM7                  0.129   minichromosome maintenance complex component 7 isofo...
MCM9                  0.060   minichromosome maintenance complex component 9 [Homo...
C8orf45               0.007   minichromosome maintenance complex component-like i...
C8orf45               0.007   minichromosome maintenance complex component-like i...
PLCD1                 0.006   phospholipase C, delta 1 isoform 2 
PLCD1                 0.006   phospholipase C, delta 1 isoform 1 
OPA1                  0.004   optic atrophy 1 isoform 8 
OPA1                  0.004   optic atrophy 1 isoform 7 
OPA1                  0.004   optic atrophy 1 isoform 6 
OPA1                  0.004   optic atrophy 1 isoform 5 
OPA1                  0.004   optic atrophy 1 isoform 4 
OPA1                  0.004   optic atrophy 1 isoform 3 
OPA1                  0.004   optic atrophy 1 isoform 2 
OPA1                  0.004   optic atrophy 1 isoform 1 
LARP1B                0.004   La ribonucleoprotein domain family member 2 isoform ...
LARP1B                0.004   La ribonucleoprotein domain family member 2 isoform ...
LARP1B                0.004   La ribonucleoprotein domain family member 2 isoform ...
DNAH9                 0.004   dynein, axonemal, heavy chain 9 isoform 2 
CLPX                  0.004   ClpX caseinolytic protease X homolog 
RASEF                 0.004   RAS and EF-hand domain containing 
DNAJC12               0.004   J domain containing protein 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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