Guide to the Human Genome
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Search of human proteins with 33286444

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33286444 mastermind-like 2 [Homo sapiens]
         (1156 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33286444 mastermind-like 2 [Homo sapiens]                         2323   0.0  
gi|38158015 mastermind-like 3 [Homo sapiens]                          252   2e-66
gi|7661990 mastermind-like 1 [Homo sapiens]                           184   4e-46
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...   142   2e-33
gi|110347429 mediator complex subunit 12 [Homo sapiens]               139   2e-32
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]      127   8e-29
gi|221139761 zinc finger protein 853 [Homo sapiens]                   117   6e-26
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]      114   5e-25
gi|17017963 forkhead box P2 isoform I [Homo sapiens]                  113   9e-25
gi|22538413 forkhead box P2 isoform III [Homo sapiens]                113   9e-25
gi|149999352 forkhead box P2 isoform II [Homo sapiens]                113   9e-25
gi|120952764 mastermind-like domain containing 1 [Homo sapiens]       107   5e-23
gi|93141033 PAX interacting protein 1 [Homo sapiens]                   99   3e-20
gi|226246533 TOX high mobility group box family member 3 isoform...    97   7e-20
gi|226054295 TOX high mobility group box family member 3 isoform...    97   7e-20
gi|4507379 TATA box binding protein [Homo sapiens]                     94   6e-19
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]              91   5e-18
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     90   1e-17
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     90   1e-17
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]    87   7e-17
gi|119943102 CREB binding protein isoform b [Homo sapiens]             87   7e-17
gi|119943104 CREB binding protein isoform a [Homo sapiens]             87   7e-17
gi|148277037 AP2 associated kinase 1 [Homo sapiens]                    87   9e-17
gi|114431248 hypothetical protein LOC205717 [Homo sapiens]             87   1e-16
gi|56549696 E1A binding protein p400 [Homo sapiens]                    85   3e-16
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom...    84   1e-15
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo...    84   1e-15
gi|164419746 nuclear factor of activated T-cells 5 isoform d [Ho...    84   1e-15
gi|164419744 nuclear factor of activated T-cells 5 isoform b [Ho...    84   1e-15
gi|27886524 nuclear factor of activated T-cells 5 isoform a [Hom...    84   1e-15

>gi|33286444 mastermind-like 2 [Homo sapiens]
          Length = 1156

 Score = 2323 bits (6019), Expect = 0.0
 Identities = 1156/1156 (100%), Positives = 1156/1156 (100%)

Query: 1    MGDTAPPQAPAGGLGGASGAGLLGGGSVTPRVHSAIVERLRARIAVCRQHHLSCEGRYER 60
            MGDTAPPQAPAGGLGGASGAGLLGGGSVTPRVHSAIVERLRARIAVCRQHHLSCEGRYER
Sbjct: 1    MGDTAPPQAPAGGLGGASGAGLLGGGSVTPRVHSAIVERLRARIAVCRQHHLSCEGRYER 60

Query: 61   GRAESSDRERESTLQLLSLVQHGQGARKAGKHTKATATAATTTAPPPPPAAPPAASQAAA 120
            GRAESSDRERESTLQLLSLVQHGQGARKAGKHTKATATAATTTAPPPPPAAPPAASQAAA
Sbjct: 61   GRAESSDRERESTLQLLSLVQHGQGARKAGKHTKATATAATTTAPPPPPAAPPAASQAAA 120

Query: 121  TAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQRNSALIALQGSLKRKQ 180
            TAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQRNSALIALQGSLKRKQ
Sbjct: 121  TAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQRNSALIALQGSLKRKQ 180

Query: 181  VVNLSPANSKRPNGFVDNSFLDIKRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQAPL 240
            VVNLSPANSKRPNGFVDNSFLDIKRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQAPL
Sbjct: 181  VVNLSPANSKRPNGFVDNSFLDIKRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQAPL 240

Query: 241  RKTNTLPSHTHSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQ 300
            RKTNTLPSHTHSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQ
Sbjct: 241  RKTNTLPSHTHSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQ 300

Query: 301  LMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPME 360
            LMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPME
Sbjct: 301  LMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPME 360

Query: 361  KIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGA 420
            KIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGA
Sbjct: 361  KIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGA 420

Query: 421  SRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKI 480
            SRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKI
Sbjct: 421  SRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKI 480

Query: 481  PSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRS 540
            PSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRS
Sbjct: 481  PSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRS 540

Query: 541  FINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQ 600
            FINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQ
Sbjct: 541  FINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQ 600

Query: 601  QQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQ 660
            QQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQ
Sbjct: 601  QQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQ 660

Query: 661  QQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVG 720
            QQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVG
Sbjct: 661  QQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVG 720

Query: 721  QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLAD 780
            QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLAD
Sbjct: 721  QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLAD 780

Query: 781  AEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHT 840
            AEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHT
Sbjct: 781  AEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHT 840

Query: 841  ILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLL 900
            ILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLL
Sbjct: 841  ILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLL 900

Query: 901  ANQNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSN 960
            ANQNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSN
Sbjct: 901  ANQNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSN 960

Query: 961  TTAPNWASQEGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQL 1020
            TTAPNWASQEGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQL
Sbjct: 961  TTAPNWASQEGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQL 1020

Query: 1021 TPAVQMRPMNQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPP 1080
            TPAVQMRPMNQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPP
Sbjct: 1021 TPAVQMRPMNQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPP 1080

Query: 1081 SLTPSNFPSPNQSSRAFQGTDHSSDLAFDFLSQQNDNMGPALNSDADFIDSLLKTEPGND 1140
            SLTPSNFPSPNQSSRAFQGTDHSSDLAFDFLSQQNDNMGPALNSDADFIDSLLKTEPGND
Sbjct: 1081 SLTPSNFPSPNQSSRAFQGTDHSSDLAFDFLSQQNDNMGPALNSDADFIDSLLKTEPGND 1140

Query: 1141 DWMKDINLDEILGNNS 1156
            DWMKDINLDEILGNNS
Sbjct: 1141 DWMKDINLDEILGNNS 1156


>gi|38158015 mastermind-like 3 [Homo sapiens]
          Length = 1133

 Score =  252 bits (643), Expect = 2e-66
 Identities = 323/1267 (25%), Positives = 483/1267 (38%), Gaps = 293/1267 (23%)

Query: 5    APPQAPAGGLGGASGAGLLGGGSVTPRVHSAIVERLRARIAVCRQHHLSCEGRYERGRAE 64
            A P +     GG  G+G  GGGS     HS +VERLR RI  CR+HH++CE RY++ + E
Sbjct: 42   AAPSSNHPAAGGCGGSGGPGGGSAAVPKHSTVVERLRQRIEGCRRHHVNCENRYQQAQVE 101

Query: 65   SSDRERESTLQLLSLVQHGQGARKAGKHTKATATAATTTAPPPPPAAPPAASQAAATAAP 124
              + ER  T+ L       Q A+K+G            T     P+ P   ++AA+    
Sbjct: 102  QLELERRDTVSLYQRTLE-QRAKKSG----------AGTGKQQHPSKPQQDAEAAS---- 146

Query: 125  PPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQRNSALIALQGSLKRKQVVNL 184
                                                  +QRN  LI LQ ++KRK     
Sbjct: 147  -------------------------------------AEQRNHTLIMLQETVKRKLEGAR 169

Query: 185  SPANSKRPNGFVDNSFLDIKRIRVGENLSAGQGGLQINNGQSQI-MSGTLPMSQAPLRKT 243
            SP N  + NG  D +F    + R+ +++SAG     INN  S + +    P+ Q  L+ +
Sbjct: 170  SPLNGDQQNGACDGNFSPTSK-RIRKDISAGMEA--INNLPSNMPLPSASPLHQLDLKPS 226

Query: 244  NTLP-SHTHSPG------------------NGLFN-------MGLKEVKKEPGETLSCSK 277
              L  S TH+PG                  NG  +       +  K++K+EP +  +C  
Sbjct: 227  LPLQNSGTHTPGLLEDLSKNGRLPEIKLPVNGCSDLEDSFTILQSKDLKQEPLDDPTCID 286

Query: 278  HMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIKQD 337
              +  ++ +N     + D     L D E QEL +EL N    P  D++            
Sbjct: 287  TSETSLSNQN---KLFSD---INLNDQEWQELIDELAN--TVPEDDIQ------------ 326

Query: 338  DPFNIDLGQQSQRSTPRPS----LPMEKIVIKSE--YSPGLTQGPSGSPQLRPPSAGPAF 391
            D FN D  ++ +    +P+    L  E   +KS+  +SP       GSPQ RP S+GP F
Sbjct: 327  DLFNEDFEEKKEPEFSQPATETPLSQESASVKSDPSHSP-FAHVSMGSPQARPSSSGPPF 385

Query: 392  SMANSALS-------------TSSPIPSVPQS-----------QAQPQTGSG-------- 419
            S  ++A S              SSP     QS           QA P+ G+G        
Sbjct: 386  STVSTATSLPSVASTPAAPNPASSPANCAVQSPQTPNQAHTPGQAPPRPGNGYLLNPAAV 445

Query: 420  -------ASRALPSWQEVSHAQQLKQIAANRQQHARM-------------------QQHQ 453
                      A+PS  ++S A+QLKQ+AA +QQ A++                   QQ Q
Sbjct: 446  TVAGSASGPVAVPS-SDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQ 504

Query: 454  QQH--QPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMA 511
            QQH  Q +NWS L   + P    F  EK  SP    Q F+ Q+  +P +A    Q   M 
Sbjct: 505  QQHSNQTSNWSPLGPPSSPYGAAFTAEKPNSPMMYPQAFNNQNPIVPPMANNL-QKTTMN 563

Query: 512  NYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQM 571
            NY+ +        H++++ QQ P +L  + +N  H  +    GNTKPL HFN+D + +  
Sbjct: 564  NYLPQ-------NHMNMINQQ-PNNLGTNSLNKQHNIL--TYGNTKPLTHFNADLSQRMT 613

Query: 572  PSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQ 631
            P V      P + +  QQQQQQQQQQQQQQQQQ    Q Q  +    + Q  +   +Q+ 
Sbjct: 614  PPVANPNKNPLMPYIQQQQQQQQQQQQQQQQQQPPPPQLQAPRAHLSEDQKRLLLMKQKG 673

Query: 632  QQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQP------------------SSQPAQS 673
              +   A        Q+Q      +     Q   P                   SQP  +
Sbjct: 674  VMNQPMAYAALPSHGQEQHPVGLPRTTGPMQSSVPPGSGGMVSGASPAGPGFLGSQPQAA 733

Query: 674  LPSQPLL--RSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNP 731
            +  Q L+  R+ L  QQK    + Q Q        +++QQ Q  H +  Q+  P  +P P
Sbjct: 734  IMKQMLIDQRAQLIEQQKQQFLREQRQQQQQQQQILAEQQLQQSH-LPRQHLQPQRNPYP 792

Query: 732  CSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQIN 791
                N   G      ++ +Q  +   +T +          +   Q        A Q ++ 
Sbjct: 793  VQQVNQFQGSPQDIAAVRSQAALQSMRTSRLMAQNAGMMGIGPSQNPGTMATAAAQSEM- 851

Query: 792  RHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLST 851
                            +     T     G   +S    Q L +P  +   +T N      
Sbjct: 852  ---------------GLAPYSTTPTSQPGMYNMSTGMTQMLQHPNQSGMSITHNQ----- 891

Query: 852  SHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQNNPMMPRP 911
            + G R P+    V  +  +G        +  V S    +TQQ    +    Q  P    P
Sbjct: 892  AQGPRQPASGQGVGMVSGFG-------QSMLVNSA---ITQQHPQMKGPVGQALPRPQAP 941

Query: 912  PTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTA--PNWASQ 969
            P L               +G  QQ   +         P RTS  +   N  A  P  A Q
Sbjct: 942  PRL------------QSLMGTVQQGAQSWQQRSLQGMPGRTSGELGPFNNGASYPLQAGQ 989

Query: 970  EGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRPM 1029
               +KQ          FP G                SQ            L PA   R  
Sbjct: 990  PRLTKQ---------HFPQGL---------------SQSVVDANTGTVRTLNPAAMGR-- 1023

Query: 1030 NQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPPS--LTPSNF 1087
             QM  +L GQ            +Q    ++  L+Q   G+       +QPP+    PS  
Sbjct: 1024 -QMMPSLPGQQ---------GTSQARPMVMSGLSQGVPGM----PAFSQPPAQQQIPSGS 1069

Query: 1088 PSPNQSSRAFQGTDHSSDLAFDFLSQQNDNMGPALNSDADFIDSLLKTEPGNDDWMKDIN 1147
             +P+  S+A++  +   D+++++         P L   AD +DS++K  PG D+WM++  
Sbjct: 1070 FAPSSQSQAYE-RNAPQDVSYNYSGDGAGGSFPGLPDGADLVDSIIKGGPG-DEWMQE-- 1125

Query: 1148 LDEILGN 1154
            LDE+ GN
Sbjct: 1126 LDELFGN 1132


>gi|7661990 mastermind-like 1 [Homo sapiens]
          Length = 1016

 Score =  184 bits (467), Expect = 4e-46
 Identities = 274/974 (28%), Positives = 387/974 (39%), Gaps = 194/974 (19%)

Query: 33  HSAIVERLRARIAVCRQHHLSCEGRYERGRAESSDRERESTLQLLSLVQHGQGARKAGKH 92
           HSA++ERLR RI +CR+HH +CE RYE    E  + ER+ T  L       + A++AGKH
Sbjct: 16  HSAVMERLRRRIELCRRHHSTCEARYEAVSPERLELERQHTFALHQRCIQAK-AKRAGKH 74

Query: 93  TKATATAATTTAPPPPPAAPPAASQAAATAAPPPPPDYHHHHQQHLLNSSNNGGSGGING 152
            +  A  A      P PAAP     AA       P  + H   +  L+S+ +  +     
Sbjct: 75  RQPPAATA------PAPAAPAPRLDAADGPEHGRPATHLHDTVKRNLDSATSPQN----- 123

Query: 153 EQQPPASTPGDQRNSALIALQGSLKRKQVVNLSPANSKRPNGFVDNSFLDIKRIRVGENL 212
                    GDQ+N       G  K ++   L  A S   NG    S L         + 
Sbjct: 124 ---------GDQQNGYGDLFPGHKKTRREAPLGVAISS--NGLPPASPLG------QSDK 166

Query: 213 SAGQGGLQINNGQSQIMSGTLPMSQAPLRKTNTLPSHTHSPGNG----LFNMGL-KEVKK 267
            +G   LQ         SG   +    L K     S  H  G       F + L KE+K+
Sbjct: 167 PSGADALQ--------SSGKHSLGLDSLNKKRLADSSLHLNGGSNPSESFPLSLNKELKQ 218

Query: 268 EPGETLSCS-KHMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLEL 326
           EP E L C      G ++Q N+ P+         L + E +EL  EL N SVP   D ++
Sbjct: 219 EPVEDLPCMITGTVGSISQSNLMPDL-------NLNEQEWKELIEEL-NRSVP---DEDM 267

Query: 327 ENMINATIKQ-DDPFNIDLGQQSQRSTPRPSLPMEKIVIKSEYSP-GLTQGPSGSPQLRP 384
           +++ N   ++  DP      + S  +T  P    + I IK+E+SP    Q   GSPQ+R 
Sbjct: 268 KDLFNEDFEEKKDP------ESSGSATQTPL--AQDINIKTEFSPAAFEQEQLGSPQVRA 319

Query: 385 PSAGPAFSMANSA-LSTSS--------------------PIPSVPQSQAQPQTGSG--AS 421
            SAG  F   +SA +ST S                    P P++  + AQ Q      A 
Sbjct: 320 GSAGQTFLGPSSAPVSTDSPSLGGSQTLFHTSGQPRADNPSPNLMPASAQAQNAQRALAG 379

Query: 422 RALPSW-----QEVSHAQQLKQIAANRQQHARMQQHQQQHQP-------TNWSALPSSAG 469
             LPS       E+S A QL+QIAA +Q+  +M Q+ QQ  P       + W     S  
Sbjct: 380 VVLPSQGPGGASELSSAHQLQQIAA-KQKREQMLQNPQQATPAPAPGQMSTWQQTGPSHS 438

Query: 470 PSPGPFGQEKIPSPSFGQQTF-SPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDV 528
               P+  EK  SPS  +Q F + +   MP V   S +           GP  Q  H+++
Sbjct: 439 SLDVPYPMEKPASPSSYKQDFTNSKLLMMPSVNKSSPR---------PGGPYLQPSHVNL 489

Query: 529 LMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQ 588
           L  Q P +L+++  NN    ++   GNTKPL H+ +D   Q  P     Q+KP+L+ Y  
Sbjct: 490 LSHQPPSNLNQNSANNQGSVLD--YGNTKPLSHYKAD-CGQGSPG--SGQSKPALMAYLP 544

Query: 589 QQQQQQQQQQQQ--------------------QQQQQQQQQQQQQQQQQQQQQSSISAQQ 628
           QQ      +Q                      Q+Q       Q Q      Q  ++S   
Sbjct: 545 QQLSHISHEQNSLFLMKPKPGNMPFRSLVPPGQEQNPSSVPVQAQATSVGTQPPAVSVAS 604

Query: 629 QQQQQSSISAQQQ------------QQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPS 676
                  +S+QQQ            QQ+Q++QQQ+  QQQQ  Q+QQ   + Q  Q    
Sbjct: 605 SHNSSPYLSSQQQAAVMKQHQLLLDQQKQREQQQKHLQQQQFLQRQQHLLAEQEKQQF-- 662

Query: 677 QPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNT-GPSPSPNPCSNP 735
           Q  L  P P  Q          P  G   Q   Q      +V G NT GPS S  P   P
Sbjct: 663 QRHLTRPPPQYQ---------DPTQGSFPQQVGQFTGSSAAVPGMNTLGPSNSSCPRVFP 713

Query: 736 NTGS--------GYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQ 787
             G+          ++S  +   QQ  G  Q    Q M Q     +   +     +  PQ
Sbjct: 714 QAGNLMPMGPGHASVSSLPTNSGQQDRGVAQFPGSQNMPQSSLYGMASGITQIVAQPPPQ 773

Query: 788 DQINRHLSRPPPDYKDQRRNVG-NMQPTAQY---SGGSSTISLNSNQALANPVSTHTILT 843
              N H   P      ++ NVG N   +A Y   S GSS +S   N+   NP  T     
Sbjct: 774 -ATNGHAHIP------RQTNVGQNTSVSAAYGQNSLGSSGLSQQHNKGTLNPGLT----K 822

Query: 844 PNSSLLSTSHGTRMPSLSTAVQNMGM---YGNLPCN---QPNTYSVTSGMNQLT--QQRN 895
           P    +S + G +    +++ Q+ GM    G  P N    P T + +  M Q    +  +
Sbjct: 823 PPVPRVSPAMGGQ----NSSWQHQGMPNLSGQTPGNSNVSPFTAASSFHMQQQAHLKMSS 878

Query: 896 PKQLLANQNNPMMP 909
           P+   A  N PM P
Sbjct: 879 PQFSQAVPNRPMAP 892



 Score = 31.6 bits (70), Expect = 4.6
 Identities = 28/111 (25%), Positives = 39/111 (35%), Gaps = 12/111 (10%)

Query: 63  AESSDRERESTLQLLSLVQHGQGARKAGKHTKATATAATTTAPP---------PPPAAPP 113
           A SS   ++     +S  Q  Q          ++A A  +  PP         P PA PP
Sbjct: 862 AASSFHMQQQAHLKMSSPQFSQAVPNRPMAPMSSAAAVGSLLPPVSAQQRTSAPAPAPPP 921

Query: 114 AASQAAATAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQ 164
            A Q       P  P+     Q     +S  GG  G++  Q  P  T G +
Sbjct: 922 TAPQQGLPGLSPAGPELGAFSQS---PASQMGGRAGLHCTQAYPVRTAGQE 969


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score =  142 bits (358), Expect = 2e-33
 Identities = 188/614 (30%), Positives = 231/614 (37%), Gaps = 121/614 (19%)

Query: 374  QGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQS-QAQPQTGSGASRALPSWQEVSH 432
            Q   G+  L  PS G  F   N AL +  P   + Q  Q Q Q            Q +  
Sbjct: 3684 QHSGGAGSLAGPSGG--FFPGNLALRSLGPDSRLLQERQLQLQQ-----------QRMQL 3730

Query: 433  AQQLKQIAANRQQHARMQQH-------QQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSF 485
            AQ+L+Q    +QQ  + QQH       QQQ Q         + GP P     + +  PS 
Sbjct: 3731 AQKLQQ----QQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKP-----QGLMPPSS 3781

Query: 486  GQQTFSPQSSPMP--GVAGGSGQSKVMANYMYKAGP-SAQGGHLDVLMQQKPQDLSRSFI 542
             Q     Q SP P  G  G  G ++V        G    QG H  VLM Q     S    
Sbjct: 3782 HQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQSRVLSSPQLA 3841

Query: 543  NNPHPAMEPR---------------QGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYT 587
                  M  R               QG+   L H      +      L +Q   SL    
Sbjct: 3842 QQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQ 3901

Query: 588  QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQ 647
            QQQQ QQQQQ QQQQQQQ QQQQQ QQQQ QQQQ     QQQQQQQ     QQQQQQ QQ
Sbjct: 3902 QQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQ----LQQQQQQLQQ 3957

Query: 648  QQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQV 707
            QQQQQQQQ QQQQQQQQ      +++L S                QQ Q Q   G G   
Sbjct: 3958 QQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQ--------------QQQQQQVALGPGMPA 4003

Query: 708  SQQQRQDQHSVVG---------QNT-GPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKK 757
               Q       +G         QNT  P+ S      P+T  G   +      + +  + 
Sbjct: 4004 KPLQHFSSPGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLA-IGTTPESMATEP 4062

Query: 758  QTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQY 817
              ++  +    Q LL+Q Q         PQ Q +    +PP     Q++   ++  TA  
Sbjct: 4063 GEVKPSLSGDSQLLLVQPQ---------PQPQPSSLQLQPPLRLPGQQQQQVSLLHTA-- 4111

Query: 818  SGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQ 877
             GG S   L S                +S   S  H    PS+S   Q   M  NL    
Sbjct: 4112 -GGGSHGQLGSGS--------------SSEASSVPHLLAQPSVSLGDQPGSMTQNL---- 4152

Query: 878  PNTYSVTSGMNQLTQQRNPKQLLANQNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLR 937
                    G  Q   +R P Q      N   P+PP  GP   +     G G +    QLR
Sbjct: 4153 -------LGPQQPMLER-PMQ------NNTGPQPPKPGPVLQSGQGLPGVGIMPTVGQLR 4198

Query: 938  PNLTHSMASMPPQR 951
              L   +A  P  R
Sbjct: 4199 AQLQGVLAKNPQLR 4212



 Score = 95.5 bits (236), Expect = 3e-19
 Identities = 114/420 (27%), Positives = 162/420 (38%), Gaps = 57/420 (13%)

Query: 428  QEVSHAQQLKQIAANRQQHARM---------QQHQQQHQPTNWSALPSSAGPSPGPFGQE 478
            Q+    +QL Q+   +++H  +         QQ QQQ Q     +   +  PS  P    
Sbjct: 3570 QQSKIQKQLDQVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLT 3629

Query: 479  KIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHL--DVLMQQKPQD 536
            K+P          P   P  G AGG    ++    M  A P   GG      L QQ+ Q 
Sbjct: 3630 KLPGQLLPGHGLQPPQGPPGGQAGG---LRLTPGGM--ALPGQPGGPFLNTALAQQQQQQ 3684

Query: 537  LSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQ 596
             S    +   P+     G   P         N  + S+ P      LL   Q Q QQQ+ 
Sbjct: 3685 HSGGAGSLAGPS-----GGFFP--------GNLALRSLGPDSR---LLQERQLQLQQQRM 3728

Query: 597  QQQQQQQQQQQQQQQQQQ-------QQQQQQQSSISAQQ----------QQQQQSSISAQ 639
            Q  Q+ QQQQQQQQQQQ        QQQQQQ   +   Q                 +  Q
Sbjct: 3729 QLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKPQGLMPPSSHQGLLVQ 3788

Query: 640  QQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQP 699
            Q   Q  Q  Q      Q    QQQ P +   Q    Q L+     L    L QQ Q   
Sbjct: 3789 QLSPQPPQGPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQSRVLSSPQLAQQGQGL- 3847

Query: 700  IAGMGYQV---SQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGK 756
               MG+++    QQQ+Q QH   G   G S       + ++G   +++Q     QQL  +
Sbjct: 3848 ---MGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMS-HSGQPKLSAQPMGSLQQLQQQ 3903

Query: 757  KQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQ 816
            +Q  Q+Q ++Q+QQ  LQQQ     +++  Q Q  +   +     + Q++ +   Q   Q
Sbjct: 3904 QQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQ 3963



 Score = 70.9 bits (172), Expect = 7e-12
 Identities = 135/560 (24%), Positives = 205/560 (36%), Gaps = 92/560 (16%)

Query: 319  PPMSDLELENMINATIKQDDPFNI-DLGQQSQRSTPRPSLPMEKIVIKSEYSPGLTQGPS 377
            P  S  EL+ M ++ +  + P  I DL +  ++   +      K  + ++  P   Q   
Sbjct: 3226 PAASGDELDKMESSLVASELPLLIEDLLEHEKKELQK------KQQLSAQLQPAQQQQQQ 3279

Query: 378  GSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRA------LPSWQEVS 431
                    + GPA +M+   L      PS+  SQ Q   G   +R       L   Q  +
Sbjct: 3280 QQQHSLLSAPGPAQAMS---LPHEGSSPSLAGSQQQLSLGLAGARQPGLPQPLMPTQPPA 3336

Query: 432  HAQQLK----QIAANRQQHARMQQH--------QQQHQPT----NWSALPSSAGPSPGPF 475
            HA Q +        + Q H    QH        QQ  QP         +P S    P   
Sbjct: 3337 HALQQRLAPSMAMVSNQGHMLSGQHGGQAGLVPQQSSQPVLSQKPMGTMPPSMCMKPQQL 3396

Query: 476  GQEKIPSPSFGQQT----FSPQSSPMP----GVAGGSGQSKVMANYMYKAGPSAQGGHLD 527
              ++  + SF   T    F+ +    P     +    G  KVMA       P      + 
Sbjct: 3397 AMQQQLANSFFPDTDLDKFAAEDIIDPIAKAKMVALKGIKKVMAQGSIGVAPGMNRQQVS 3456

Query: 528  VLMQQKPQDLSRSFINN-------PHPAMEPRQGNTKP-------------------LFH 561
            +L Q+     S    N+          A +P Q    P                   LFH
Sbjct: 3457 LLAQRLSGGPSSDLQNHVAAGSGQERSAGDPSQPRPNPPTFAQGVINEADQRQYEEWLFH 3516

Query: 562  FNSDQANQQMPSVLPSQ---NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 618
              + Q  Q    VL  Q   ++ S      +Q+  ++  ++  +   ++ +   +QQ + 
Sbjct: 3517 --TQQLLQMQLKVLEEQIGVHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKI 3574

Query: 619  QQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQ-------PA 671
            Q+Q     ++QQ++ +++ A+ + +QQQQQQQQQQQQQQ        PS         P 
Sbjct: 3575 QKQLD-QVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLTKLPG 3633

Query: 672  QSLPS---QPLLRSPLPLQQKLLL----QQMQNQPIAGMGYQVSQQQRQDQHS-VVGQNT 723
            Q LP    QP    P      L L      +  QP          QQ+Q QHS   G   
Sbjct: 3634 QLLPGHGLQPPQGPPGGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGSLA 3693

Query: 724  GPS----PSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQL-LLQQQML 778
            GPS    P      +    S  +  +Q  L QQ M   Q LQ+Q  +Q+QQ  LL Q  +
Sbjct: 3694 GPSGGFFPGNLALRSLGPDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAI 3753

Query: 779  ADAEKIAPQDQINRHLSRPP 798
               ++  P  Q N+ L   P
Sbjct: 3754 QQQQQQGPGVQTNQALGPKP 3773



 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 68/312 (21%), Positives = 101/312 (32%), Gaps = 46/312 (14%)

Query: 409  QSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPT----NWSAL 464
            Q Q Q Q      +     Q+    QQ +Q+    Q    +   QQQ Q         A 
Sbjct: 3945 QQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAK 4004

Query: 465  PSSAGPSPGPFG--------QEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYK 516
            P     SPG  G        ++    P+   +     S+   G        + MA    +
Sbjct: 4005 PLQHFSSPGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPESMATEPGE 4064

Query: 517  AGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLP 576
              PS  G    +L+Q +PQ    S    P   +  +Q     L H     ++ Q+ S   
Sbjct: 4065 VKPSLSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSS 4124

Query: 577  SQN--------KPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQ------------- 615
            S+         +PS+    Q     Q     QQ   ++  Q     Q             
Sbjct: 4125 SEASSVPHLLAQPSVSLGDQPGSMTQNLLGPQQPMLERPMQNNTGPQPPKPGPVLQSGQG 4184

Query: 616  -----------QQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQ 664
                       Q + Q   + A+  Q +  S   QQQ Q    Q+Q QQ Q  +Q    Q
Sbjct: 4185 LPGVGIMPTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQ 4244

Query: 665  QPSSQ--PAQSL 674
            +P +Q  P Q L
Sbjct: 4245 EPGTQTSPLQGL 4256



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 69/255 (27%), Positives = 96/255 (37%), Gaps = 30/255 (11%)

Query: 384  PPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANR 443
            P + GP   +     +T  P  S   ++  P T  G   A+ +  E S A +  ++  + 
Sbjct: 4012 PGALGPTLLLTGKEQNTVDPAVSSEATEG-PSTHQGGPLAIGTTPE-SMATEPGEVKPSL 4069

Query: 444  QQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAG- 502
               +++   Q Q QP      PSS    P       +  P   QQ  S   +   G  G 
Sbjct: 4070 SGDSQLLLVQPQPQPQ-----PSSLQLQP------PLRLPGQQQQQVSLLHTAGGGSHGQ 4118

Query: 503  -GSGQSKVMANYMYK-AGPSAQGGHLDVLMQQK---PQD--LSRSFINN-------PHPA 548
             GSG S   ++  +  A PS   G     M Q    PQ   L R   NN       P P 
Sbjct: 4119 LGSGSSSEASSVPHLLAQPSVSLGDQPGSMTQNLLGPQQPMLERPMQNNTGPQPPKPGPV 4178

Query: 549  MEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQ 608
            ++  QG           Q   Q+  VL     P L H + QQQQQ Q    Q+Q QQ Q 
Sbjct: 4179 LQSGQGLPGVGIMPTVGQLRAQLQGVLAKN--PQLRHLSPQQQQQLQALLMQRQLQQSQA 4236

Query: 609  QQQQQQQQQQQQQSS 623
             +Q    Q+   Q+S
Sbjct: 4237 VRQTPPYQEPGTQTS 4251



 Score = 42.7 bits (99), Expect = 0.002
 Identities = 156/732 (21%), Positives = 247/732 (33%), Gaps = 153/732 (20%)

Query: 105  PPPPPAAPPAASQAAATAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQ 164
            P  PP  PP  S   A A PP            +L +S+  G+G        P  TP  Q
Sbjct: 2190 PTAPPTYPPYPSPTGAPAQPP------------MLGASSRPGAGQPGEFHTTPPGTPRHQ 2237

Query: 165  RNSALIALQG---SLKRKQVVNL---------SPANSKRPNGFVDNSFLDIKRIRVGENL 212
             ++    L+    SL    V             P  S  P G      L++K+  +G + 
Sbjct: 2238 PSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFG-ESRKALEVKKEELGASS 2296

Query: 213  -SAGQGGLQ-INNGQSQIMSGTLPMSQAPLRKTNTLPSHTH----SPGNGLFNMGLKEVK 266
             S G   L  +++  S    G L +    + K    P  +     SPG     +GL+  +
Sbjct: 2297 PSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPG-----LGLRPQE 2351

Query: 267  KEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLEL 326
              P + L+ S      + +   + + Y   P      P   E    L   S+P       
Sbjct: 2352 PPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLP------- 2404

Query: 327  ENMINATIKQDDPFN-IDLGQQSQRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSPQLRPP 385
                       DPF+ +    QSQ S+  P  P          SP   +  S  P  RPP
Sbjct: 2405 ----------SDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPP 2454

Query: 386  SAGPAFSMANSALSTSSPIPSVPQ------SQAQPQTGSGASRALPSWQEVSHAQQLKQI 439
            S     S    A     P P  P+      S A    G+G     P+      A +L   
Sbjct: 2455 SRPQ--SRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGG---FPAALPAGPAGEL--- 2506

Query: 440  AANRQQHARMQQHQQQHQPTNWSALPSSAG----PSPGPFGQEKIPSPSFGQQTFSPQSS 495
                  HA++   Q    P N+   P +      PSP  F   +    + G+ +  P   
Sbjct: 2507 ------HAKVPSGQ----PPNFVRSPGTGAFVGTPSPMRFTFPQ----AVGEPSLKPPV- 2551

Query: 496  PMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFIN-NPHPA---MEP 551
            P PG+    G      N  +  GP+            KPQ  + +    N HP+   + P
Sbjct: 2552 PQPGLPPPHG-----INSHFGPGPTLG----------KPQSTNYTVATGNFHPSGSPLGP 2596

Query: 552  RQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQ 611
              G+T   +  +  +    +P   P  + P L H   Q+       ++++          
Sbjct: 2597 SSGSTGESYGLSPLRPPSVLPPPAPDGSLPYLSHGASQRSGITSPVEKREDPGTGMGS-- 2654

Query: 612  QQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQ------QQQQQQQQQQQQQ 665
                      S  +A+    Q   +S   Q + ++Q+Q+Q+      +QQ Q+   +Q++
Sbjct: 2655 ----------SLATAELPGTQDPGMSGLSQTELEKQRQRQRLRELLIRQQIQRNTLRQEK 2704

Query: 666  PSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVG----- 720
             ++  A      P      P             P AG          QD+ S+VG     
Sbjct: 2705 ETAAAAAGAVGPPGSWGAEPSSPAFEQLSRGQTPFAG---------TQDKSSLVGLPPSK 2755

Query: 721  -----QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQ--------IMEQ 767
                    G  PS +  S P   +    S   + ++QL+G  Q   ++        + +Q
Sbjct: 2756 LSGPILGPGSFPSDDRLSRPPPPA--TPSSMDVNSRQLVGGSQAFYQRAPYPGSLPLQQQ 2813

Query: 768  KQQLLLQQQMLA 779
            +QQL  QQQ  A
Sbjct: 2814 QQQLWQQQQATA 2825



 Score = 36.6 bits (83), Expect = 0.14
 Identities = 178/882 (20%), Positives = 280/882 (31%), Gaps = 156/882 (17%)

Query: 371  GLTQGPSGSPQLRPPSAGPA-------FSMANSALSTSSPIPSVPQSQAQPQTGSGASRA 423
            G T GP        P +GP        F + + AL+     P+    +      S  +  
Sbjct: 3186 GATGGPPAHLLTPSPLSGPGGSSLLEKFELESGALTLPGG-PAASGDELDKMESSLVASE 3244

Query: 424  LPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSP 483
            LP   E     + K++   +Q  A++Q  QQQ Q     +L S+ GP+            
Sbjct: 3245 LPLLIEDLLEHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAPGPA------------ 3292

Query: 484  SFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFIN 543
               Q    P     P +AG   Q  +          + Q G    LM  +P   +     
Sbjct: 3293 ---QAMSLPHEGSSPSLAGSQQQLSL------GLAGARQPGLPQPLMPTQPPAHALQQRL 3343

Query: 544  NPHPAMEPRQGNTKPLFHFNS-----DQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQ 598
             P  AM   QG+     H         Q++Q + S  P    P  +    QQ   QQQ  
Sbjct: 3344 APSMAMVSNQGHMLSGQHGGQAGLVPQQSSQPVLSQKPMGTMPPSMCMKPQQLAMQQQLA 3403

Query: 599  QQQQQQQQQQQQQQQQ----------------QQQQQQQSSISAQQQQQQQSSISAQQQQ 642
                      +   +                 ++   Q S   A    +QQ S+ AQ+  
Sbjct: 3404 NSFFPDTDLDKFAAEDIIDPIAKAKMVALKGIKKVMAQGSIGVAPGMNRQQVSLLAQRLS 3463

Query: 643  QQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLP--SQPLLRSPLPLQQKLLL---QQMQN 697
                   Q        Q++    P SQP  + P  +Q ++      Q +  L   QQ+  
Sbjct: 3464 GGPSSDLQNHVAAGSGQERSAGDP-SQPRPNPPTFAQGVINEADQRQYEEWLFHTQQLLQ 3522

Query: 698  QPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQL--MG 755
              +  +  Q+   ++  +     Q T                  +  QQS + +QL  + 
Sbjct: 3523 MQLKVLEEQIGVHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKIQKQLDQVR 3582

Query: 756  KKQTLQRQIM-------EQKQQLLLQQQMLADAEKIAPQDQINRHLSRPP----PDYKDQ 804
            K+Q     +M       +Q+QQ   QQQ    A       Q  R L++ P    P +  Q
Sbjct: 3583 KQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLTKLPGQLLPGHGLQ 3642

Query: 805  -------------RRNVGNM-----------------QPTAQYSGGSSTISLNSNQALAN 834
                         R   G M                 Q   Q+SGG+ +++  S      
Sbjct: 3643 PPQGPPGGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGSLAGPSGGFFPG 3702

Query: 835  PVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQR 894
             ++  + L P+S LL          L    Q M +   L   Q         + Q+  Q+
Sbjct: 3703 NLALRS-LGPDSRLLQER------QLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQ 3755

Query: 895  NPKQLLANQNNPMM-PRPPTLGPSNNNN---------------VATFGAGSVGNSQQLRP 938
              +Q    Q N  + P+P  L P +++                    G   V   QQ  P
Sbjct: 3756 QQQQGPGVQTNQALGPKPQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHP 3815

Query: 939  N------------LTHSMASMPP---QRTSNVMITSNTTAPNWASQE---------GTSK 974
                         +T S     P   Q+   +M     TA     Q+         G S 
Sbjct: 3816 GALGPQGPHRQVLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSH 3875

Query: 975  QQEALTSAGVR-----FPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQL--TPAVQMR 1027
             Q++L S   +      P G+       Q LQQ    QQ  Q+ +    QL      Q +
Sbjct: 3876 LQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQ 3935

Query: 1028 PMNQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTG-LNQSRTGINQPPSLTPSN 1086
               Q+ Q    Q     + L  +  Q   Q      Q   G LNQSRT ++         
Sbjct: 3936 QQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQV 3995

Query: 1087 FPSPNQSSRAFQGTDHSSDLAFDFL--SQQNDNMGPALNSDA 1126
               P   ++  Q       L    L   ++ + + PA++S+A
Sbjct: 3996 ALGPGMPAKPLQHFSSPGALGPTLLLTGKEQNTVDPAVSSEA 4037



 Score = 36.2 bits (82), Expect = 0.19
 Identities = 43/181 (23%), Positives = 66/181 (36%), Gaps = 27/181 (14%)

Query: 355  PSLPMEKIVIKSEYSP----GLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVP-- 408
            P  P+   ++++  SP      T      P + PPS G     A+  L    P    P  
Sbjct: 969  PESPLAAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLL 1028

Query: 409  QSQAQPQTGSGASRALPSWQEVSHAQQL----KQIAANRQQHARMQQHQQQHQPTNWSAL 464
            Q    PQ  S  S+  P    +S    L    K +  + +      + ++  +P   +  
Sbjct: 1029 QHSLVPQN-SPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALE 1087

Query: 465  PSSAGPSPGPFGQEKIPSPS----------FGQQTF------SPQSSPMPGVAGGSGQSK 508
            PS+  P P P G    P+PS           G+ T       +P S P PG   GS  S+
Sbjct: 1088 PSATSPLPSPMGDLSCPAPSPAPALDDFSGLGEDTAPLDGIDAPGSQPEPGQTPGSLASE 1147

Query: 509  V 509
            +
Sbjct: 1148 L 1148


>gi|110347429 mediator complex subunit 12 [Homo sapiens]
          Length = 2177

 Score =  139 bits (350), Expect = 2e-32
 Identities = 132/373 (35%), Positives = 168/373 (45%), Gaps = 76/373 (20%)

Query: 385  PSAGPAFSMANSALSTSSPIPSVPQSQAQ-PQTGSGASRALPSWQEVSHAQQLKQIAANR 443
            P+ GP              +P+ P      P T +G     PS  + S  +Q +Q A  +
Sbjct: 1849 PAGGPRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTGVMGLEPSSYKTSVYRQ-QQPAVPQ 1907

Query: 444  QQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKI----PSPSFGQQT---FSPQSSP 496
             Q  R Q  Q Q                 G  GQ  +    PS S+G QT   ++P  S 
Sbjct: 1908 GQRLRQQLQQSQ-----------------GMLGQSSVHQMTPSSSYGLQTSQGYTPYVSH 1950

Query: 497  MPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVL---------MQQKPQDLSRSFINNPHP 547
            + G+   +G +  M    Y + P  Q  H             +QQ+P      +++   P
Sbjct: 1951 V-GLQQHTGPAGTMVPPSYSSQPY-QSTHPSTNPTLVDPTRHLQQRPS----GYVHQQAP 2004

Query: 548  AMEPRQGNTKPLFHFNSDQANQQMPSV-----LPSQNKPSLLHYT-----QQQQQQQQQQ 597
                   +T+   H    Q  QQ P +     + +Q   + +  T     QQQQQQQQQQ
Sbjct: 2005 TYGHGLTSTQRFSH----QTLQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQ 2060

Query: 598  QQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQ 657
            QQQQQQQQQQQQQQQQ   +QQQQ  I  QQQQQQQ     QQQQQQQQQQQQQQQQQQQ
Sbjct: 2061 QQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQ-----QQQQQQQQQQQQQQQQQQQ 2115

Query: 658  QQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHS 717
             QQQQQQ       Q+ P QP  +S    Q++ L Q  Q Q  A +  Q+ QQ       
Sbjct: 2116 HQQQQQQ-------QAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQL------ 2162

Query: 718  VVGQNTGPSPSPN 730
                NT P PS N
Sbjct: 2163 ---SNTQPQPSTN 2172



 Score =  101 bits (251), Expect = 5e-21
 Identities = 105/341 (30%), Positives = 135/341 (39%), Gaps = 53/341 (15%)

Query: 357  LPMEKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQA---- 412
            LPM+K+  +  Y   L    +G   L P S   +              P+VPQ Q     
Sbjct: 1863 LPMQKLPTRPTYPGVLPTTMTGVMGLEPSSYKTSVYRQQQ--------PAVPQGQRLRQQ 1914

Query: 413  --QPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQH-------------QQQHQ 457
              Q Q   G S         S+  Q  Q       H  +QQH              Q +Q
Sbjct: 1915 LQQSQGMLGQSSVHQMTPSSSYGLQTSQGYTPYVSHVGLQQHTGPAGTMVPPSYSSQPYQ 1974

Query: 458  PTNWSALPSSAGPS----PGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANY 513
             T+ S  P+   P+      P G     +P++G    S Q      +     Q   M + 
Sbjct: 1975 STHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTL-----QQTPMIST 2029

Query: 514  MYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPS 573
            M     SAQG    V          RS    P    + +Q   +        Q  QQ   
Sbjct: 2030 MTPM--SAQGVQAGV----------RSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQY 2077

Query: 574  VLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQ 633
             +  Q +  +L     +QQQQQQQQQQQQQQQQQQQQQQQQQQ QQQQ   +A  Q Q Q
Sbjct: 2078 HIRQQQQQQIL-----RQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQ 2132

Query: 634  SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSL 674
            S    Q+Q  QQ QQQQQ     +Q QQQ      QP+ ++
Sbjct: 2133 SQPQFQRQGLQQTQQQQQTAALVRQLQQQLSNTQPQPSTNI 2173



 Score = 92.0 bits (227), Expect = 3e-18
 Identities = 115/419 (27%), Positives = 160/419 (38%), Gaps = 45/419 (10%)

Query: 380  PQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQI 439
            P+   P A P  +      ST     S P ++ +   G G  R+ P    V     L   
Sbjct: 1767 PKTDKPGAAPPSTEERKKKSTKGKKRSQPATKTEDY-GMGPGRSGPYGVTVP-PDLLHHP 1824

Query: 440  AANRQQHARMQQHQ----QQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSS 495
                  H   +Q       Q+QP     LP+  GP   P+   ++P      +   P   
Sbjct: 1825 NPGSITHLNYRQGSIGLYTQNQP-----LPAG-GPRVDPYRPVRLPMQKLPTRPTYPGVL 1878

Query: 496  P--MPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPA----M 549
            P  M GV G    S   + Y  +     QG  L   +QQ    L +S ++   P+    +
Sbjct: 1879 PTTMTGVMGLEPSSYKTSVYRQQQPAVPQGQRLRQQLQQSQGMLGQSSVHQMTPSSSYGL 1938

Query: 550  EPRQGNTKPLFHFNSDQ-------------ANQQMPSVLPSQNKPSLLHYTQQQQQQQQQ 596
            +  QG T  + H    Q             ++Q   S  PS N P+L+  T+  QQ+   
Sbjct: 1939 QTSQGYTPYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPSTN-PTLVDPTRHLQQRPSG 1997

Query: 597  QQQQQQQQQ-----QQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQ 651
               QQ           Q+   Q  QQ    S+++    Q  Q+ +  +      +QQQQQ
Sbjct: 1998 YVHQQAPTYGHGLTSTQRFSHQTLQQTPMISTMTPMSAQGVQAGV--RSTAILPEQQQQQ 2055

Query: 652  QQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQ 711
            QQQQQQQQQQQQQQ   Q  Q    Q   +  L  QQ+   QQ Q Q       Q  QQQ
Sbjct: 2056 QQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQ----QQQQQQQQQ 2111

Query: 712  RQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQ 770
            +Q QH    Q     P P P S P         QQ+   QQ     + LQ+Q+   + Q
Sbjct: 2112 QQQQHQQQQQQQAAPPQPQPQSQPQFQR--QGLQQTQQQQQTAALVRQLQQQLSNTQPQ 2168



 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 78/325 (24%), Positives = 103/325 (31%), Gaps = 72/325 (22%)

Query: 543  NNPHPAMEPRQGNTKPL-FHFNSDQANQQMPSVLP-----------SQNKPSLLHYTQQQ 590
            N P PA  PR    +P+             P VLP           S  K S+  Y QQQ
Sbjct: 1845 NQPLPAGGPRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTGVMGLEPSSYKTSV--YRQQQ 1902

Query: 591  QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQ 650
                Q Q+ +QQ QQ Q    Q    Q    SS   Q  Q     +S    QQ       
Sbjct: 1903 PAVPQGQRLRQQLQQSQGMLGQSSVHQMTPSSSYGLQTSQGYTPYVSHVGLQQHTGPAGT 1962

Query: 651  QQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP--------------LPLQQKLLLQQMQ 696
                    Q  Q   PS+ P    P++ L + P              L   Q+   Q +Q
Sbjct: 1963 MVPPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQ 2022

Query: 697  NQPI-------AGMGYQVS---------QQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSG 740
              P+       +  G Q           QQQ+Q Q     Q                   
Sbjct: 2023 QTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQ------------------ 2064

Query: 741  YMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLS----- 795
                QQ    QQ    +Q  Q+QI+ Q+QQ   QQQ     ++   Q Q  +H       
Sbjct: 2065 -QQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 2123

Query: 796  ----RPPPDYKDQRRNVGNMQPTAQ 816
                +P P  + Q +  G  Q   Q
Sbjct: 2124 AAPPQPQPQSQPQFQRQGLQQTQQQ 2148


>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
          Length = 748

 Score =  127 bits (318), Expect = 8e-29
 Identities = 123/357 (34%), Positives = 151/357 (42%), Gaps = 45/357 (12%)

Query: 573 SVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQ----- 627
           S    Q +  L     QQQQQQQQ QQQQQ   QQQQQQQQQQQ Q QQS++  Q     
Sbjct: 145 STATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVV 204

Query: 628 --------QQQQQQSSISAQQQQQQQQQQQQQQ----------QQQQQQQQQQQQQPSSQ 669
                   QQQQQQ  I    Q QQQ QQQQQQ          QQQQQQQQQQQQQ  + 
Sbjct: 205 QQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQAL 264

Query: 670 PAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSP 729
            AQ    QP ++ P P   + L QQ+Q         Q  Q   Q Q   V QN      P
Sbjct: 265 QAQPPIQQPPMQQPQPPPSQALPQQLQQMHHT----QHHQPPPQPQQPPVAQNQPSQLPP 320

Query: 730 NPCSNPNTGSGYMNSQQSLLNQQ----LMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIA 785
              + P          Q L  Q     +       Q  +  Q QQ     Q    A+ +A
Sbjct: 321 QSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVA 380

Query: 786 PQDQINRH----LSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHTI 841
           P  Q+++     LS P P  + Q        P      G  +   NSN      VS+   
Sbjct: 381 PGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSN------VSSGPA 434

Query: 842 LTPNSSLLSTS-HGTRMPSLSTAVQNMGMYGNLPCNQP-NTYSVTS--GMNQLTQQR 894
            +P+S L S S   ++ P  +   QN  +    P N P N  SV S  G +Q  +Q+
Sbjct: 435 PSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQ 491



 Score = 95.1 bits (235), Expect = 3e-19
 Identities = 118/413 (28%), Positives = 148/413 (35%), Gaps = 107/413 (25%)

Query: 372 LTQGPS-GSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGA-------SRA 423
           LT GP+ G+  +  P  GP  S+       +   P     Q  P T   A       S A
Sbjct: 88  LTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTA 147

Query: 424 LPSWQ----EVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEK 479
            P  Q    +V+  QQ +Q    +QQ A +QQ QQQ Q                      
Sbjct: 148 TPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQ---------------------- 185

Query: 480 IPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSR 539
                  QQ F  Q S M        Q +  A                  + Q+ Q L +
Sbjct: 186 -------QQQFQAQQSAM--------QQQFQA------------------VVQQQQQLQQ 212

Query: 540 SFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQ 599
                     + +Q +   L H N  Q  QQ   +     + + L   QQQQQQQQQQQQ
Sbjct: 213 ---------QQQQQQHLIKLHHQNQQQIQQQQQQL----QRIAQLQLQQQQQQQQQQQQQ 259

Query: 600 QQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQ 659
           QQQ  Q Q   QQ   QQ Q   S +  QQ QQ       Q   Q QQ    Q Q  Q  
Sbjct: 260 QQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLP 319

Query: 660 QQQQQQPSSQPAQSLPSQPL--------LRSPLPLQQKLLLQQMQNQPIA---------- 701
            Q Q QP    AQ+LP Q L        +R+P+ +QQ  +  Q+Q Q  A          
Sbjct: 320 PQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMV 379

Query: 702 GMGYQVSQQQ-------RQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQS 747
             G QVSQ            Q     Q+  P P P+P   P   S   NS  S
Sbjct: 380 APGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSP--QPGQPSSQPNSNVS 430



 Score = 32.3 bits (72), Expect = 2.7
 Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 969  QEGTSKQQEALTSAG-VRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAP----------- 1016
            Q+   +QQ+AL +   ++ P        P+Q+L Q +     +Q    P           
Sbjct: 254  QQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQN 313

Query: 1017 -PNQLTPAVQMRPMNQMSQTLNGQ---TMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQS 1072
             P+QL P  Q +P+   +Q L GQ   T  PL+ +          + P + Q  T +  +
Sbjct: 314  QPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTA 373

Query: 1073 RTGINQPPSLTPSNFPSPNQSS 1094
            +      P +  S    P  SS
Sbjct: 374  QAAQMVAPGVQVSQSSLPMLSS 395



 Score = 31.2 bits (69), Expect = 6.0
 Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 3/106 (2%)

Query: 369 SPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTG-SGASRALPSW 427
           +PG+    S  P L  PS G       S      P P   Q  +QP +  S      PS 
Sbjct: 380 APGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSS 439

Query: 428 QEVSHAQQLKQ--IAANRQQHARMQQHQQQHQPTNWSALPSSAGPS 471
              S + Q  Q  + A   Q+  +      + P N S++ S AG S
Sbjct: 440 FLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSS 485


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score =  117 bits (293), Expect = 6e-26
 Identities = 117/345 (33%), Positives = 159/345 (46%), Gaps = 31/345 (8%)

Query: 472 PGPFGQEKIPSPSFGQQTFSPQ---SSPM-PGVAGGSGQSKVMANYMYKAGPSAQGGHLD 527
           PGP         S  Q+   PQ   SSP  P V+   G S++      +  P  +   L 
Sbjct: 37  PGPDTLSGGSGGSESQEEEEPQERNSSPQRPAVSAPVGASEIAE----ETRPGQRELQLQ 92

Query: 528 VLMQQKP--QDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLH 585
            L QQ    Q      +  P P +E +Q   +      S    ++  SV   + KP L  
Sbjct: 93  QLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQSVHHQELKPELQL 152

Query: 586 YTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---QQSSISAQQQ-----QQQQSSIS 637
             QQQQ Q QQ Q+QQ+ QQQQ+Q Q QQ Q+QQ   QQ  +  Q Q     QQQQ  + 
Sbjct: 153 MHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQ 212

Query: 638 AQQQQQQQQQQQQQQQQQQQQQ-QQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQ--- 693
            QQ  QQQ+Q QQQQ QQQQ+Q QQQQQ    Q    L  Q L +    LQQ+LL Q   
Sbjct: 213 QQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQA 272

Query: 694 QMQNQPIAGMGYQVSQQQR----QDQHSVVGQNTGPSPSPNPCSNPNTGSGYM----NSQ 745
           Q+Q Q +     Q+ QQQ+    Q Q   + Q     P   P          M     S+
Sbjct: 273 QLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSE 332

Query: 746 QSLLNQ-QLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQ 789
           Q L  Q Q + ++Q L+RQ  +++ QL LQ+++    +++  Q Q
Sbjct: 333 QELEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQ 377



 Score =  107 bits (267), Expect = 7e-23
 Identities = 92/278 (33%), Positives = 131/278 (47%), Gaps = 33/278 (11%)

Query: 550 EPRQGNTKPLFHFNSDQ--ANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQ 607
           EP++ N+ P     S    A++      P Q +  L    QQ + QQQ Q +Q QQ Q  
Sbjct: 56  EPQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQQPEPQQQPQHEQLQQPQPH 115

Query: 608 QQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQ---------QQQQQQQQQQQQQQQQQQ 658
            + QQQ QQ  QQQ S   Q QQ++  S+  Q+         QQQQ Q QQ Q+QQ+ QQ
Sbjct: 116 LELQQQPQQDGQQQLS---QLQQEKHQSVHHQELKPELQLMHQQQQLQPQQVQEQQRLQQ 172

Query: 659 QQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQ--MQNQPIAGMGYQVSQQQRQDQH 716
           QQ+Q Q   +Q  Q L  Q  L+  +  QQ L  QQ  +Q Q +     Q+ QQQ Q Q 
Sbjct: 173 QQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQ 232

Query: 717 SVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQT-LQRQIMEQKQQLLLQQ 775
             + Q                    +  QQ  L QQL+ ++Q  LQ+Q++EQ QQ  LQQ
Sbjct: 233 EQLQQQQ---------------QLLLLQQQGQLQQQLLQQQQAQLQQQLLEQ-QQAQLQQ 276

Query: 776 QMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQP 813
           Q+L   ++   Q Q  + L +     + Q+     ++P
Sbjct: 277 QLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEP 314



 Score = 80.9 bits (198), Expect = 7e-15
 Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 38/211 (18%)

Query: 529 LMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQ 588
           L+QQ+ + L +  +      ++ +Q      F    +Q  QQ   +L  Q         Q
Sbjct: 203 LLQQQQEQLQQQQLLQQQEQLQQQQ------FQQQQEQLQQQQQLLLLQQQGQLQQQLLQ 256

Query: 589 QQQQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQSSISAQQQQQQQSSI--------- 636
           QQQ Q QQQ  +QQQ Q QQQ   QQQ+Q QQQQQQ  +  QQ+Q QQ  +         
Sbjct: 257 QQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEE 316

Query: 637 --------------SAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRS 682
                         S Q+ +QQ+Q+ ++QQ+ ++QQ+Q+Q Q    +  Q L  Q     
Sbjct: 317 EEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQQ----- 371

Query: 683 PLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQ 713
            L  QQ+ L QQ     +  +     QQ+ Q
Sbjct: 372 -LEQQQQQLEQQEVQLELTPVELGAQQQEVQ 401



 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 33/294 (11%)

Query: 425 PSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPS 484
           P  Q +   QQL+      QQ  + QQ Q Q Q      +            QE++    
Sbjct: 148 PELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQ---------QEQLQQQV 198

Query: 485 FGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINN 544
             QQ    Q   +        Q ++      +     Q     +L+QQ+ Q L +  +  
Sbjct: 199 QEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQ-LQQQLLQQ 257

Query: 545 PHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQ 604
               ++ +      L      Q  QQ+      Q +        QQQQ+Q QQQQ Q   
Sbjct: 258 QQAQLQQQ------LLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPP 311

Query: 605 QQQQQQQQ-----------QQQQQQQQQSSISAQQQ---QQQQSSISAQQQQQQQQQQQQ 650
            + +++++            +Q+ +QQ+  +  QQ+   QQ+Q  +  + Q++ QQ +QQ
Sbjct: 312 LEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQQ 371

Query: 651 QQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMG 704
            +QQQQQ +QQ+ Q   +        Q +     P+Q +L   Q++  P AG G
Sbjct: 372 LEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPEL---QLELVPAAGGG 422



 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 88/404 (21%), Positives = 148/404 (36%), Gaps = 54/404 (13%)

Query: 281 GQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPF 340
           G  +QE   P      P    +   +    +E+   + P   +L+L+ +      Q  P 
Sbjct: 48  GSESQEEEEPQERNSSPQRPAVSAPVGA--SEIAEETRPGQRELQLQQLEQQPEPQQQP- 104

Query: 341 NIDLGQQSQRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALST 400
                Q  Q   P+P L +++                G  QL         S+ +  L  
Sbjct: 105 -----QHEQLQQPQPHLELQQ-----------QPQQDGQQQLSQLQQEKHQSVHHQELKP 148

Query: 401 SSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQ-------HQ 453
              +    Q Q QPQ      R L   QE    QQ ++    +QQ    QQ        Q
Sbjct: 149 ELQLMH-QQQQLQPQQVQEQQR-LQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQ 206

Query: 454 QQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANY 513
           QQ Q      L            QE++    F QQ    Q      +    GQ +     
Sbjct: 207 QQEQLQQQQLLQQ----------QEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQ 256

Query: 514 MYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQM-- 571
             +A    Q      L++Q+   L +  +      ++ +Q   + L     +Q  QQ   
Sbjct: 257 QQQAQLQQQ------LLEQQQAQLQQQLLLQQQEQLQQQQ--QQQLLQQQQEQLQQQQLQ 308

Query: 572 -PSVLPSQNKPSLLHYT-----QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSIS 625
            P + P + +   L         +Q+ +QQ+Q+ ++QQ+ ++QQ+Q+Q Q + Q++    
Sbjct: 309 PPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQL 368

Query: 626 AQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQ 669
            QQ +QQQ  +  Q+ Q +    +   QQQ+ Q +    QP  Q
Sbjct: 369 EQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQ 412


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score =  114 bits (285), Expect = 5e-25
 Identities = 93/245 (37%), Positives = 107/245 (43%), Gaps = 31/245 (12%)

Query: 573 SVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQ----- 627
           S    Q +  L     QQQQQQQQ QQQQQ   QQQQQQQQQQQ Q QQS++  Q     
Sbjct: 145 STATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVV 204

Query: 628 --------QQQQQQSSISAQQQQQQQQQQQQQQ----------QQQQQQQQQQQQQPSSQ 669
                   QQQQQQ  I    Q QQQ QQQQQQ          QQQQQQQQQQQQQ  + 
Sbjct: 205 QQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQAL 264

Query: 670 PAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSP 729
            AQ    QP ++ P P   + L QQ+Q         Q  Q   Q Q   V QN      P
Sbjct: 265 QAQPPIQQPPMQQPQPPPSQALPQQLQQMHHT----QHHQPPPQPQQPPVAQNQPSQLPP 320

Query: 730 NPCSNPNTGSGYMNSQQSLLNQQ----LMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIA 785
              + P          Q L  Q     +       Q  +  Q QQ     Q    A+ +A
Sbjct: 321 QSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVA 380

Query: 786 PQDQI 790
           P  Q+
Sbjct: 381 PGVQM 385



 Score = 98.6 bits (244), Expect = 3e-20
 Identities = 129/494 (26%), Positives = 171/494 (34%), Gaps = 109/494 (22%)

Query: 372 LTQGPS-GSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGA-------SRA 423
           LT GP+ G+  +  P  GP  S+       +   P     Q  P T   A       S A
Sbjct: 88  LTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTA 147

Query: 424 LPSWQ----EVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEK 479
            P  Q    +V+  QQ +Q    +QQ A +QQ QQQ Q                      
Sbjct: 148 TPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQ---------------------- 185

Query: 480 IPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSR 539
                  QQ F  Q S M        Q +  A                  + Q+ Q L +
Sbjct: 186 -------QQQFQAQQSAM--------QQQFQA------------------VVQQQQQLQQ 212

Query: 540 SFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQ 599
                     + +Q +   L H N  Q  QQ   +     + + L   QQQQQQQQQQQQ
Sbjct: 213 ---------QQQQQQHLIKLHHQNQQQIQQQQQQL----QRIAQLQLQQQQQQQQQQQQQ 259

Query: 600 QQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQ 659
           QQQ  Q Q   QQ   QQ Q   S +  QQ QQ       Q   Q QQ    Q Q  Q  
Sbjct: 260 QQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLP 319

Query: 660 QQQQQQPSSQPAQSLPSQPL--------LRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQ 711
            Q Q QP    AQ+LP Q L        +R+P+ +QQ  +  Q+Q Q  A    Q +Q  
Sbjct: 320 PQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMV 379

Query: 712 RQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQL 771
                 +                P T    + S    L +Q M +               
Sbjct: 380 APGVQMITEALAQGGMHIRARFPPTTAVSAIPSSSIPLGRQPMAQ--------------- 424

Query: 772 LLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGG-----SSTISL 826
            + Q  L      +P  Q+    S PPP     +    + QP +  S G     SS +  
Sbjct: 425 -VSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPS 483

Query: 827 NSNQALANPVSTHT 840
            S Q   +PV+  T
Sbjct: 484 PSPQPSQSPVTART 497


>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
          Length = 715

 Score =  113 bits (283), Expect = 9e-25
 Identities = 82/184 (44%), Positives = 99/184 (53%), Gaps = 21/184 (11%)

Query: 584 LHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQ 643
           LH    QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ     QQQQQQ     A++QQQ
Sbjct: 146 LHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---QQQQQQHPGKQAKEQQQ 202

Query: 644 QQQQQQQ--------QQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQ-------Q 688
           QQQQQQQ        QQQ  Q QQ QQQQ   S   Q L S P  ++ LP+Q        
Sbjct: 203 QQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLS 262

Query: 689 KLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPN--PCSNPNTGSGYMNSQQ 746
              +QQ+  + + G+        +     +   N+  + S N    S P T    +N Q 
Sbjct: 263 PAEIQQLWKE-VTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKASPPITHHSIVNGQS 321

Query: 747 SLLN 750
           S+L+
Sbjct: 322 SVLS 325



 Score =  107 bits (266), Expect = 9e-23
 Identities = 100/335 (29%), Positives = 144/335 (42%), Gaps = 55/335 (16%)

Query: 572 PSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQ--QQQQQQQQSSISAQQQ 629
           P V+  Q    +L       QQ Q   QQQQ    QQQQ Q+  ++QQ+Q    +  QQQ
Sbjct: 96  PQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 155

Query: 630 QQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQK 689
           QQQQ     QQQQQQQQQQQQQQQQQQQQQQQQQQQ   + A+    Q   +  L  QQ 
Sbjct: 156 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 215

Query: 690 LLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLL 749
           +  QQ+             QQ +Q QH +  Q  G    P                Q+ L
Sbjct: 216 VFQQQLLQM----------QQLQQQQHLLSLQRQGLISIP--------------PGQAAL 251

Query: 750 NQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG 809
             Q + +      +I +  +++     M         +D   +H               G
Sbjct: 252 PVQSLPQAGLSPAEIQQLWKEVTGVHSM---------EDNGIKH---------------G 287

Query: 810 NMQPTAQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGM 869
            +  T   S  SST S N+++A + P++ H+I+   SS+LS    +     + A     +
Sbjct: 288 GLDLTTNNS--SSTTSSNTSKA-SPPITHHSIVNGQSSVLSARRDSSSHEETGASHT--L 342

Query: 870 YGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQN 904
           YG+  C  P   S+     Q  +  N +  L +++
Sbjct: 343 YGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRS 377



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 115/549 (20%), Positives = 194/549 (35%), Gaps = 65/549 (11%)

Query: 392 SMANSALSTSSPIPSVPQSQAQPQTG--SGASRALPSWQEVSHAQQLKQIAANRQQHARM 449
           +++NS+++ +       Q  A  + G  SG + +  S  E+ H QQ + + A RQ   + 
Sbjct: 9   TISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQALQAARQLLLQQ 68

Query: 450 QQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQS-SPMPGVAGGSGQSK 508
           Q    +   ++    P     S      + I +P   QQ    Q  SP    A    Q  
Sbjct: 69  QTSGLKSPKSSDKQRPLQVPVSVAMMTPQVI-TPQQMQQILQQQVLSPQQLQALLQQQQA 127

Query: 509 VMANYM-----YKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFN 563
           VM         YK     +  HL +L QQ+ Q   +          + +Q          
Sbjct: 128 VMLQQQQLQEFYKK--QQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ---------- 175

Query: 564 SDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQQ 620
             Q  QQ       Q  P       ++QQQQQQQQQQ   QQ   QQQ  Q QQ QQQQ 
Sbjct: 176 QQQQQQQQQQQQQQQQHPGK---QAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQH 232

Query: 621 QSSISAQ-------------QQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPS 667
             S+  Q              Q   Q+ +S  + QQ  ++       +    +      +
Sbjct: 233 LLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLT 292

Query: 668 SQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSP 727
           +  + S  S    ++  P+    ++   Q+  ++      S ++    H++ G      P
Sbjct: 293 TNNSSSTTSSNTSKASPPITHHSIVNG-QSSVLSARRDSSSHEETGASHTLYGHGVCKWP 351

Query: 728 SPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQ 787
               C +     G     + L N+  +  + T Q ++  Q  Q  L+ Q+  + E++   
Sbjct: 352 G---CESICEDFGQF--LKHLNNEHALDDRSTAQCRVQMQVVQ-QLEIQLSKERERL--- 402

Query: 788 DQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHTILT---- 843
             +  HL   P + K   + +  +           T   +  Q    P +  T +T    
Sbjct: 403 QAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPS 462

Query: 844 -------PNSSLLSTSHGTR--MPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQR 894
                  PN   +   H  +  +P  S    N   Y N     P TY+    + Q   + 
Sbjct: 463 VITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPPFTYATL--IRQAIMES 520

Query: 895 NPKQLLANQ 903
           + +QL  N+
Sbjct: 521 SDRQLTLNE 529


>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
          Length = 623

 Score =  113 bits (283), Expect = 9e-25
 Identities = 82/184 (44%), Positives = 99/184 (53%), Gaps = 21/184 (11%)

Query: 584 LHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQ 643
           LH    QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ     QQQQQQ     A++QQQ
Sbjct: 54  LHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---QQQQQQHPGKQAKEQQQ 110

Query: 644 QQQQQQQ--------QQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQ-------Q 688
           QQQQQQQ        QQQ  Q QQ QQQQ   S   Q L S P  ++ LP+Q        
Sbjct: 111 QQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLS 170

Query: 689 KLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPN--PCSNPNTGSGYMNSQQ 746
              +QQ+  + + G+        +     +   N+  + S N    S P T    +N Q 
Sbjct: 171 PAEIQQLWKE-VTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKASPPITHHSIVNGQS 229

Query: 747 SLLN 750
           S+L+
Sbjct: 230 SVLS 233



 Score =  107 bits (266), Expect = 9e-23
 Identities = 100/335 (29%), Positives = 144/335 (42%), Gaps = 55/335 (16%)

Query: 572 PSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQ--QQQQQQQQSSISAQQQ 629
           P V+  Q    +L       QQ Q   QQQQ    QQQQ Q+  ++QQ+Q    +  QQQ
Sbjct: 4   PQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 63

Query: 630 QQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQK 689
           QQQQ     QQQQQQQQQQQQQQQQQQQQQQQQQQQ   + A+    Q   +  L  QQ 
Sbjct: 64  QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 123

Query: 690 LLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLL 749
           +  QQ+             QQ +Q QH +  Q  G    P                Q+ L
Sbjct: 124 VFQQQLLQM----------QQLQQQQHLLSLQRQGLISIP--------------PGQAAL 159

Query: 750 NQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG 809
             Q + +      +I +  +++     M         +D   +H               G
Sbjct: 160 PVQSLPQAGLSPAEIQQLWKEVTGVHSM---------EDNGIKH---------------G 195

Query: 810 NMQPTAQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGM 869
            +  T   S  SST S N+++A + P++ H+I+   SS+LS    +     + A     +
Sbjct: 196 GLDLTTNNS--SSTTSSNTSKA-SPPITHHSIVNGQSSVLSARRDSSSHEETGASHT--L 250

Query: 870 YGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQN 904
           YG+  C  P   S+     Q  +  N +  L +++
Sbjct: 251 YGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRS 285



 Score =  106 bits (265), Expect = 1e-22
 Identities = 70/130 (53%), Positives = 81/130 (62%), Gaps = 13/130 (10%)

Query: 569 QQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQ 628
           QQ  +V+  Q +    +  QQ+Q   Q  QQQQQQQQQQQQQQQQQQQQQQQQ     QQ
Sbjct: 31  QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ-----QQ 85

Query: 629 QQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQ 688
           QQQQQ     QQQQQQQQQ   +Q ++QQQQQQQQQQ +   AQ L  Q  L     LQQ
Sbjct: 86  QQQQQ-----QQQQQQQQQHPGKQAKEQQQQQQQQQQLA---AQQLVFQQQLLQMQQLQQ 137

Query: 689 KLLLQQMQNQ 698
           +  L  +Q Q
Sbjct: 138 QQHLLSLQRQ 147



 Score =  104 bits (260), Expect = 4e-22
 Identities = 72/139 (51%), Positives = 82/139 (58%), Gaps = 19/139 (13%)

Query: 569 QQMPSVLPSQ--NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQ------QQQQQQQQQQ 620
           QQM  +L  Q  +   L    QQQQ    QQQQ Q+  ++QQ+Q      QQQQQQQQQQ
Sbjct: 10  QQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQ 69

Query: 621 QSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLL 680
           Q     QQQQQQQ     QQQQQQQQQQQQQQQQQQQQQQ   +Q   Q  Q    Q L 
Sbjct: 70  Q-----QQQQQQQ-----QQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLA 119

Query: 681 RSPLPLQQKLL-LQQMQNQ 698
              L  QQ+LL +QQ+Q Q
Sbjct: 120 AQQLVFQQQLLQMQQLQQQ 138



 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 84/408 (20%), Positives = 143/408 (35%), Gaps = 54/408 (13%)

Query: 525 HLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLL 584
           HL +L QQ+ Q   +          + +Q            Q  QQ       Q  P   
Sbjct: 55  HLQLLQQQQQQQQQQQQQQQQQQQQQQQQ----------QQQQQQQQQQQQQQQQHPGK- 103

Query: 585 HYTQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQQQSSISAQ-------------Q 628
               ++QQQQQQQQQQ   QQ   QQQ  Q QQ QQQQ   S+  Q              
Sbjct: 104 --QAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPV 161

Query: 629 QQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQ 688
           Q   Q+ +S  + QQ  ++       +    +      ++  + S  S    ++  P+  
Sbjct: 162 QSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKASPPITH 221

Query: 689 KLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSL 748
             ++   Q+  ++      S ++    H++ G      P    C +     G     + L
Sbjct: 222 HSIVNG-QSSVLSARRDSSSHEETGASHTLYGHGVCKWPG---CESICEDFGQF--LKHL 275

Query: 749 LNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNV 808
            N+  +  + T Q ++  Q  Q  L+ Q+  + E++     +  HL   P + K   + +
Sbjct: 276 NNEHALDDRSTAQCRVQMQVVQ-QLEIQLSKERERL---QAMMTHLHMRPSEPKPSPKPL 331

Query: 809 GNMQPTAQYSGGSSTISLNSNQALANPVSTHTILT-----------PNSSLLSTSHGTR- 856
             +           T   +  Q    P +  T +T           PN   +   H  + 
Sbjct: 332 NLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKY 391

Query: 857 -MPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQ 903
            +P  S    N   Y N     P TY+    + Q   + + +QL  N+
Sbjct: 392 NIPMSSEIAPNYEFYKNADVRPPFTYATL--IRQAIMESSDRQLTLNE 437


>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
          Length = 740

 Score =  113 bits (283), Expect = 9e-25
 Identities = 82/184 (44%), Positives = 99/184 (53%), Gaps = 21/184 (11%)

Query: 584 LHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQ 643
           LH    QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ     QQQQQQ     A++QQQ
Sbjct: 171 LHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---QQQQQQHPGKQAKEQQQ 227

Query: 644 QQQQQQQ--------QQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQ-------Q 688
           QQQQQQQ        QQQ  Q QQ QQQQ   S   Q L S P  ++ LP+Q        
Sbjct: 228 QQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLS 287

Query: 689 KLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPN--PCSNPNTGSGYMNSQQ 746
              +QQ+  + + G+        +     +   N+  + S N    S P T    +N Q 
Sbjct: 288 PAEIQQLWKE-VTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKASPPITHHSIVNGQS 346

Query: 747 SLLN 750
           S+L+
Sbjct: 347 SVLS 350



 Score =  107 bits (266), Expect = 9e-23
 Identities = 100/335 (29%), Positives = 144/335 (42%), Gaps = 55/335 (16%)

Query: 572 PSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQ--QQQQQQQQSSISAQQQ 629
           P V+  Q    +L       QQ Q   QQQQ    QQQQ Q+  ++QQ+Q    +  QQQ
Sbjct: 121 PQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 180

Query: 630 QQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQK 689
           QQQQ     QQQQQQQQQQQQQQQQQQQQQQQQQQQ   + A+    Q   +  L  QQ 
Sbjct: 181 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 240

Query: 690 LLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLL 749
           +  QQ+             QQ +Q QH +  Q  G    P                Q+ L
Sbjct: 241 VFQQQLLQM----------QQLQQQQHLLSLQRQGLISIP--------------PGQAAL 276

Query: 750 NQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG 809
             Q + +      +I +  +++     M         +D   +H               G
Sbjct: 277 PVQSLPQAGLSPAEIQQLWKEVTGVHSM---------EDNGIKH---------------G 312

Query: 810 NMQPTAQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGM 869
            +  T   S  SST S N+++A + P++ H+I+   SS+LS    +     + A     +
Sbjct: 313 GLDLTTNNS--SSTTSSNTSKA-SPPITHHSIVNGQSSVLSARRDSSSHEETGASHT--L 367

Query: 870 YGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQN 904
           YG+  C  P   S+     Q  +  N +  L +++
Sbjct: 368 YGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRS 402



 Score =  106 bits (265), Expect = 1e-22
 Identities = 70/130 (53%), Positives = 81/130 (62%), Gaps = 13/130 (10%)

Query: 569 QQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQ 628
           QQ  +V+  Q +    +  QQ+Q   Q  QQQQQQQQQQQQQQQQQQQQQQQQ     QQ
Sbjct: 148 QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ-----QQ 202

Query: 629 QQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQ 688
           QQQQQ     QQQQQQQQQ   +Q ++QQQQQQQQQQ +   AQ L  Q  L     LQQ
Sbjct: 203 QQQQQ-----QQQQQQQQQHPGKQAKEQQQQQQQQQQLA---AQQLVFQQQLLQMQQLQQ 254

Query: 689 KLLLQQMQNQ 698
           +  L  +Q Q
Sbjct: 255 QQHLLSLQRQ 264



 Score =  104 bits (260), Expect = 4e-22
 Identities = 72/139 (51%), Positives = 82/139 (58%), Gaps = 19/139 (13%)

Query: 569 QQMPSVLPSQ--NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQ------QQQQQQQQQQ 620
           QQM  +L  Q  +   L    QQQQ    QQQQ Q+  ++QQ+Q      QQQQQQQQQQ
Sbjct: 127 QQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQ 186

Query: 621 QSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLL 680
           Q     QQQQQQQ     QQQQQQQQQQQQQQQQQQQQQQ   +Q   Q  Q    Q L 
Sbjct: 187 Q-----QQQQQQQ-----QQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLA 236

Query: 681 RSPLPLQQKLL-LQQMQNQ 698
              L  QQ+LL +QQ+Q Q
Sbjct: 237 AQQLVFQQQLLQMQQLQQQ 255



 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 84/408 (20%), Positives = 143/408 (35%), Gaps = 54/408 (13%)

Query: 525 HLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLL 584
           HL +L QQ+ Q   +          + +Q            Q  QQ       Q  P   
Sbjct: 172 HLQLLQQQQQQQQQQQQQQQQQQQQQQQQ----------QQQQQQQQQQQQQQQQHPGK- 220

Query: 585 HYTQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQQQSSISAQ-------------Q 628
               ++QQQQQQQQQQ   QQ   QQQ  Q QQ QQQQ   S+  Q              
Sbjct: 221 --QAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPV 278

Query: 629 QQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQ 688
           Q   Q+ +S  + QQ  ++       +    +      ++  + S  S    ++  P+  
Sbjct: 279 QSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKASPPITH 338

Query: 689 KLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSL 748
             ++   Q+  ++      S ++    H++ G      P    C +     G     + L
Sbjct: 339 HSIVNG-QSSVLSARRDSSSHEETGASHTLYGHGVCKWPG---CESICEDFGQF--LKHL 392

Query: 749 LNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNV 808
            N+  +  + T Q ++  Q  Q  L+ Q+  + E++     +  HL   P + K   + +
Sbjct: 393 NNEHALDDRSTAQCRVQMQVVQ-QLEIQLSKERERL---QAMMTHLHMRPSEPKPSPKPL 448

Query: 809 GNMQPTAQYSGGSSTISLNSNQALANPVSTHTILT-----------PNSSLLSTSHGTR- 856
             +           T   +  Q    P +  T +T           PN   +   H  + 
Sbjct: 449 NLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKY 508

Query: 857 -MPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQ 903
            +P  S    N   Y N     P TY+    + Q   + + +QL  N+
Sbjct: 509 NIPMSSEIAPNYEFYKNADVRPPFTYATL--IRQAIMESSDRQLTLNE 554



 Score = 33.9 bits (76), Expect = 0.92
 Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 18/213 (8%)

Query: 604 QQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQ 663
           Q+   +        Q   S++S+Q     +   S+     +    +    QQQQ  Q  +
Sbjct: 3   QESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQALQAAR 62

Query: 664 QQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNT 723
           Q    Q    L S        PLQ+ L   ++           +      D H     NT
Sbjct: 63  QLLLQQQTSGLKSPKSSDKQRPLQELLPETKL----------CICGHSSGDGHP---HNT 109

Query: 724 GPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEK 783
              P       P   +      Q +L QQ++  +Q   + +++Q+Q ++LQQQ L +  K
Sbjct: 110 FAVPVSVAMMTPQVIT--PQQMQQILQQQVLSPQQL--QALLQQQQAVMLQQQQLQEFYK 165

Query: 784 IAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQ 816
              Q+Q++  L +     + Q++     Q   Q
Sbjct: 166 -KQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQ 197


>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
          Length = 774

 Score =  107 bits (268), Expect = 5e-23
 Identities = 122/487 (25%), Positives = 186/487 (38%), Gaps = 72/487 (14%)

Query: 302 MDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPM-- 359
           +D ELQEL  ELT I  P  ++L+LE ++    K ++P  +D  Q +  +TP+PS+ M  
Sbjct: 172 VDQELQELLEELTKIQDPSPNELDLEKILGT--KPEEPLVLDHPQATLSTTPKPSVQMSH 229

Query: 360 -EKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGS 418
            E +    E++   +Q    S Q+   S G ++S+ +++    SP  S+ QS++Q Q   
Sbjct: 230 LESLASSKEFASSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAML 289

Query: 419 GAS---RALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSA------- 468
             +     +P W    HA QLK +AA++Q  A     +QQ    +WS LP          
Sbjct: 290 PVALPPLPVPQWH---HAHQLKALAASKQGSAT----KQQGPTPSWSGLPPPGLSPPYRP 342

Query: 469 --GPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVM---ANYMYKAGPSAQG 523
              P P P      P P      FSPQS  +  ++  +     +    N +  +  S+  
Sbjct: 343 VPSPHPPPLPLPPPPPP------FSPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSN 396

Query: 524 GHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSL 583
             L   M   P+ L    +    P   P+      L           + S LP+ N    
Sbjct: 397 AALGPAMPYAPEKLPSPALTQ-QPQFGPQSSILANLMSSTIKTPQGHLMSALPASNPGPS 455

Query: 584 LHYTQQQQQQQQQQQQQQQQQ--------------QQQQQQQQQQQQQQQQQSSISA--- 626
             Y  ++       QQ    Q               QQQQQQQQQQQ       IS+   
Sbjct: 456 PPYRPEKLSSPGLPQQSFTPQCSLIRSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSS 515

Query: 627 ------QQQQQQQSSISAQQ---------------QQQQQQQQQQQQQQQQQQQQQQQQQ 665
                  QQ    SS  A +               +   Q+        +Q       QQ
Sbjct: 516 KTLSMIMQQGMASSSPGATEPFTFGNTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQ 575

Query: 666 PSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGP 725
           P+   A S  +     + L LQQ+   QQ Q    + +  Q+ QQ ++ Q SV   +   
Sbjct: 576 PTPTQASSATASSTATATLQLQQQQQQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPA 635

Query: 726 SPSPNPC 732
            P    C
Sbjct: 636 LPRQGCC 642



 Score = 38.1 bits (87), Expect = 0.049
 Identities = 101/464 (21%), Positives = 160/464 (34%), Gaps = 80/464 (17%)

Query: 86  ARKAGKHTKATATAATTTAPPPPPAAPP----AASQAAATAAPPPPPDYHHHHQQHLLNS 141
           A K G  TK      + +  PPP  +PP     +        PPPPP +          S
Sbjct: 312 ASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPFSPQSLMVSCMS 371

Query: 142 SNNGGSGGINGEQQPPASTPGDQRNSALIALQGSLKRKQVVNLSPANSKRPNGFVDNSFL 201
           SN      + G      S+     N+AL         K     SPA +++P     +S L
Sbjct: 372 SNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLP---SPALTQQPQFGPQSSIL 428

Query: 202 DIKRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQAPLRKTNTLPSHTHSPGNGLFNMG 261
                    NL +      I   Q  +MS  LP S       N  PS  + P   L + G
Sbjct: 429 --------ANLMSS----TIKTPQGHLMS-ALPAS-------NPGPSPPYRP-EKLSSPG 467

Query: 262 LKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPM 321
           L +    P     CS       T      N       +Q    +   +F  +++ S   +
Sbjct: 468 LPQQSFTP----QCSLIRSLTPTS-----NLLSQQQQQQQQQQQANVIFKPISSNSSKTL 518

Query: 322 SDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSPQ 381
           S +  + M +++    +PF          + P      E    K    P  ++ PS    
Sbjct: 519 SMIMQQGMASSSPGATEPFTFG------NTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHY 572

Query: 382 LRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAA 441
           L+ P+  P  + + +A ST++    + Q Q Q Q     S  L   Q +   Q+ ++  A
Sbjct: 573 LQQPT--PTQASSATASSTATATLQLQQQQQQQQQQPDHSSFLLQ-QMMQQPQRFQRSVA 629

Query: 442 NRQQHARMQQH--------------QQQHQPTNWSALPSSAGPSPG-------------- 473
           +    A  +Q               + QHQ  N  +  S   P PG              
Sbjct: 630 SDSMPALPRQGCCHLFAWTSAASSVKPQHQHGN--SFTSRQDPQPGDVSPSNITHVDKAC 687

Query: 474 PFGQEKIPSPSFGQQTFSPQS----SPMPGVAGGSGQSKVMANY 513
             G+ + P  S G+Q  S Q+    S +PG +     ++V ++Y
Sbjct: 688 KLGEARHPQVSLGRQPPSCQALGSESFLPGSSFAHELARVTSSY 731


>gi|93141033 PAX interacting protein 1 [Homo sapiens]
          Length = 1069

 Score = 98.6 bits (244), Expect = 3e-20
 Identities = 86/248 (34%), Positives = 106/248 (42%), Gaps = 29/248 (11%)

Query: 563 NSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQS 622
           +S Q +    +VL SQ K  +   T   QQQQQ QQQQQQ      Q QQ  Q QQQQQ 
Sbjct: 376 HSQQGHTNANAVLFSQVK--VTPETHMLQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQ 433

Query: 623 SISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRS 682
            IS Q   QQ     +QQQQQQQQ    Q  QQQ Q  QQQ  P  Q  +  P Q L   
Sbjct: 434 QISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHR--PQQQL--- 488

Query: 683 PLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYM 742
             P QQ+  LQQ  +Q       Q    Q Q QHS++ Q                     
Sbjct: 489 -QPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQ--------------------- 526

Query: 743 NSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYK 802
             QQ +  QQL    Q  Q+Q M+ +    L Q   A   ++ PQ    +   + PP   
Sbjct: 527 QQQQQIQQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQQQPPPSP 586

Query: 803 DQRRNVGN 810
            Q +  G+
Sbjct: 587 QQHQLFGH 594



 Score = 93.6 bits (231), Expect = 1e-18
 Identities = 70/180 (38%), Positives = 85/180 (47%), Gaps = 16/180 (8%)

Query: 529 LMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQ 588
           L QQ+ Q +S+     P+P   P   +          Q  QQ     P Q     L + Q
Sbjct: 427 LQQQQQQQISQQ----PYPQQPPHPFS----------QQQQQQQQAHPHQFSQQQLQFPQ 472

Query: 589 QQQQQQQQQQQQQQQQQQQQQQQQQQQQ-QQQQQSSISAQQQQQQQSSISAQQQQQQQQQ 647
           QQ    QQ  + QQQ Q  QQQ   QQQ  Q QQ  +  QQ  Q Q   S  QQQQQQQ 
Sbjct: 473 QQLHPPQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQI 532

Query: 648 QQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQV 707
           QQQQ Q+  QQQQQQQ Q  + P  S  SQ  L+  +P QQ    QQ Q  P +   +Q+
Sbjct: 533 QQQQLQRMHQQQQQQQMQSQTAPHLSQTSQ-ALQHQVPPQQPPQQQQQQQPPPSPQQHQL 591



 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 79/269 (29%), Positives = 98/269 (36%), Gaps = 52/269 (19%)

Query: 428 QEVSHAQQ---------LKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQE 478
           Q+V+H+QQ           Q+    + H   QQ Q Q Q      L            Q+
Sbjct: 372 QQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQHPVLHLQP--------QQ 423

Query: 479 KIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLS 538
            +      QQ  S Q  P       S Q +                      Q  P   S
Sbjct: 424 IMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQ-------------------QQAHPHQFS 464

Query: 539 RSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQ 598
           +  +  P   + P Q            Q ++    + P Q + +L     Q QQ Q QQQ
Sbjct: 465 QQQLQFPQQQLHPPQ------------QLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQ 512

Query: 599 QQQQQQQQ----QQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQ 654
           Q  Q QQQ    QQQQQQQ QQQQ Q+     QQQQ Q  +     Q  Q  Q Q   QQ
Sbjct: 513 QLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQHQVPPQQ 572

Query: 655 QQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683
             QQQQQQQ  PS Q  Q     P +  P
Sbjct: 573 PPQQQQQQQPPPSPQQHQLFGHDPAVEIP 601



 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 73/258 (28%), Positives = 99/258 (38%), Gaps = 33/258 (12%)

Query: 575 LPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQS 634
           +   N+PS + +  Q      +  +QQ    QQ           Q + +      QQQQ 
Sbjct: 347 IQQMNRPSNVAHILQTLSAPTKNLEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQ 406

Query: 635 SISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQ 694
           +   QQQ      Q QQ  Q QQQQQQQ  Q      Q  P QP    P P  Q+   QQ
Sbjct: 407 AQQQQQQHPVLHLQPQQIMQLQQQQQQQISQ------QPYPQQP----PHPFSQQ---QQ 453

Query: 695 MQNQPIAGMGYQVSQQQ---RQDQHSVVGQNTGPSPSPNPCSNPNT-GSGYMNSQQSLLN 750
            Q Q      +Q SQQQ    Q Q     Q   P     P    +     +   QQ  L 
Sbjct: 454 QQQQ---AHPHQFSQQQLQFPQQQLHPPQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQ 510

Query: 751 QQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINR----HLSRP--------P 798
           QQ + + Q  Q  +++Q+QQ  +QQQ L    +   Q Q+      HLS+         P
Sbjct: 511 QQQLAQLQQ-QHSLLQQQQQQQIQQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQHQVP 569

Query: 799 PDYKDQRRNVGNMQPTAQ 816
           P    Q++      P+ Q
Sbjct: 570 PQQPPQQQQQQQPPPSPQ 587



 Score = 35.0 bits (79), Expect = 0.41
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 974  KQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVA-PPNQLTPAVQMRPMNQM 1032
            +QQ+    +   +P   P  ++  Q  QQ     QFSQ+ +  P  QL P  Q+    Q 
Sbjct: 428  QQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQ 487

Query: 1033 SQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSR 1073
             Q    Q     +   L+ +QL  Q L  L Q  + L Q +
Sbjct: 488  LQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQ 528



 Score = 33.1 bits (74), Expect = 1.6
 Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 16/105 (15%)

Query: 408 PQSQAQP-QTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQ----------H 456
           PQ Q QP Q      +     Q+  H  Q +Q+A  +QQH+ +QQ QQQ          H
Sbjct: 484 PQQQLQPFQQQHALQQQFHQLQQ--HQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMH 541

Query: 457 QPTNWSALPSSAGPSPGPFG---QEKIPSPSFGQQTFSPQSSPMP 498
           Q      + S   P         Q ++P     QQ    Q  P P
Sbjct: 542 QQQQQQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQQQPPPSP 586


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score = 97.4 bits (241), Expect = 7e-20
 Identities = 68/158 (43%), Positives = 77/158 (48%), Gaps = 11/158 (6%)

Query: 564 SDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSS 623
           S  + Q  PSV   Q++  L    QQQQQQ QQ QQQQ QQ Q  QQ QQQ QQQ  Q  
Sbjct: 421 SAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQHFQHH 480

Query: 624 ISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683
           +    QQQQQ       QQQ QQQ QQ+ Q QQ Q  Q Q QPS  P Q  P    + SP
Sbjct: 481 MQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPS--PRQHSPVASQITSP 538

Query: 684 LPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQ 721
           +P          Q+Q         SQ Q Q Q  V+ Q
Sbjct: 539 IPAIGSPQPASQQHQ---------SQIQSQTQTQVLSQ 567



 Score = 93.6 bits (231), Expect = 1e-18
 Identities = 67/153 (43%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 564 SDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSS 623
           S      + S   +Q  PS+     Q Q QQQQQQQQQQ QQ QQQQ QQ Q  QQ Q  
Sbjct: 412 SSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQ-- 469

Query: 624 ISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683
              QQ QQQ      QQ  QQQQQ  QQQ  QQQ QQQ QQ+   Q  Q +  Q     P
Sbjct: 470 ---QQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQ---SQP 523

Query: 684 LPLQQKLLLQQMQNQPIAGMGY-QVSQQQRQDQ 715
            P Q   +  Q+   PI  +G  Q + QQ Q Q
Sbjct: 524 SPRQHSPVASQI-TSPIPAIGSPQPASQQHQSQ 555



 Score = 77.0 bits (188), Expect = 9e-14
 Identities = 82/253 (32%), Positives = 96/253 (37%), Gaps = 61/253 (24%)

Query: 519 PSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQ 578
           P +Q G +    Q   Q L RS    P     P                NQ + SV  + 
Sbjct: 356 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPM---------------NQIVTSVTIAA 400

Query: 579 NKPSLLH----------YTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQ 628
           N PS +                   Q     Q QQ Q Q QQQQQQQQQQ QQ       
Sbjct: 401 NMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQM------ 454

Query: 629 QQQQQSSISAQQQQQQQQQQQQQQQQQQQQQ------QQQQQQPSSQPAQSLPSQPLLRS 682
                     QQQQ QQ Q  QQ QQQ QQQ      QQ  QQ      Q +  Q L + 
Sbjct: 455 ----------QQQQLQQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQ 504

Query: 683 PLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHS-VVGQNTGPSP---SPNPCSNPNTG 738
              LQQ+L LQQ+Q+        Q   Q    QHS V  Q T P P   SP P S  +  
Sbjct: 505 ---LQQRLQLQQLQHM-------QHQSQPSPRQHSPVASQITSPIPAIGSPQPASQQHQS 554

Query: 739 SGYMNSQQSLLNQ 751
                +Q  +L+Q
Sbjct: 555 QIQSQTQTQVLSQ 567



 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 54/167 (32%), Positives = 66/167 (39%), Gaps = 67/167 (40%)

Query: 633 QSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLL 692
           Q S S Q QQ Q Q QQQQQQQQQQ QQ QQQQ                    LQQ  + 
Sbjct: 426 QVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQ--------------------LQQHQMH 465

Query: 693 QQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQ 752
           QQ+Q             QQ Q QH                             Q  + Q 
Sbjct: 466 QQIQ-------------QQMQQQHF----------------------------QHHMQQH 484

Query: 753 LMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPP 799
           L  ++Q LQ+QI +Q+ Q  LQQ++         Q Q  +H S+P P
Sbjct: 485 LQQQQQHLQQQINQQQLQQQLQQRLQLQ------QLQHMQHQSQPSP 525



 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 40/146 (27%), Positives = 54/146 (36%), Gaps = 4/146 (2%)

Query: 516 KAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVL 575
           +  PS Q     + +QQ+ Q   +         ++  Q + +             M   L
Sbjct: 426 QVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQHFQHHMQQHL 485

Query: 576 PSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSS 635
             Q +       QQQ QQQ QQ+ Q QQ Q  Q Q Q   +Q     S  A Q      +
Sbjct: 486 QQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQH----SPVASQITSPIPA 541

Query: 636 ISAQQQQQQQQQQQQQQQQQQQQQQQ 661
           I + Q   QQ Q Q Q Q Q Q   Q
Sbjct: 542 IGSPQPASQQHQSQIQSQTQTQVLSQ 567



 Score = 31.2 bits (69), Expect = 6.0
 Identities = 35/200 (17%), Positives = 73/200 (36%), Gaps = 15/200 (7%)

Query: 603 QQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQ 662
           ++Q+Q  +++ +  +++   +++A +      + +   + Q  +  QQ            
Sbjct: 293 EEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLL 352

Query: 663 QQQPSSQPAQSLPSQPLLRSPLPLQ---QKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVV 719
              P SQ      S   L+  LP     + L ++   NQ +  +    +         + 
Sbjct: 353 LNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLIS 412

Query: 720 GQNT---GPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQ 776
              T   G +PS     +  T    M  QQ         ++Q  Q+Q+ + +QQ L Q Q
Sbjct: 413 SMGTTMVGSAPSTQVSPSVQTQQHQMQLQQ---------QQQQQQQQMQQMQQQQLQQHQ 463

Query: 777 MLADAEKIAPQDQINRHLSR 796
           M    ++   Q     H+ +
Sbjct: 464 MHQQIQQQMQQQHFQHHMQQ 483


>gi|226054295 TOX high mobility group box family member 3 isoform 1
           [Homo sapiens]
          Length = 576

 Score = 97.4 bits (241), Expect = 7e-20
 Identities = 68/158 (43%), Positives = 77/158 (48%), Gaps = 11/158 (6%)

Query: 564 SDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSS 623
           S  + Q  PSV   Q++  L    QQQQQQ QQ QQQQ QQ Q  QQ QQQ QQQ  Q  
Sbjct: 426 SAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQHFQHH 485

Query: 624 ISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683
           +    QQQQQ       QQQ QQQ QQ+ Q QQ Q  Q Q QPS  P Q  P    + SP
Sbjct: 486 MQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPS--PRQHSPVASQITSP 543

Query: 684 LPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQ 721
           +P          Q+Q         SQ Q Q Q  V+ Q
Sbjct: 544 IPAIGSPQPASQQHQ---------SQIQSQTQTQVLSQ 572



 Score = 93.6 bits (231), Expect = 1e-18
 Identities = 67/153 (43%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 564 SDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSS 623
           S      + S   +Q  PS+     Q Q QQQQQQQQQQ QQ QQQQ QQ Q  QQ Q  
Sbjct: 417 SSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQ-- 474

Query: 624 ISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683
              QQ QQQ      QQ  QQQQQ  QQQ  QQQ QQQ QQ+   Q  Q +  Q     P
Sbjct: 475 ---QQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQ---SQP 528

Query: 684 LPLQQKLLLQQMQNQPIAGMGY-QVSQQQRQDQ 715
            P Q   +  Q+   PI  +G  Q + QQ Q Q
Sbjct: 529 SPRQHSPVASQI-TSPIPAIGSPQPASQQHQSQ 560



 Score = 77.0 bits (188), Expect = 9e-14
 Identities = 82/253 (32%), Positives = 96/253 (37%), Gaps = 61/253 (24%)

Query: 519 PSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQ 578
           P +Q G +    Q   Q L RS    P     P                NQ + SV  + 
Sbjct: 361 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPM---------------NQIVTSVTIAA 405

Query: 579 NKPSLLH----------YTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQ 628
           N PS +                   Q     Q QQ Q Q QQQQQQQQQQ QQ       
Sbjct: 406 NMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQM------ 459

Query: 629 QQQQQSSISAQQQQQQQQQQQQQQQQQQQQQ------QQQQQQPSSQPAQSLPSQPLLRS 682
                     QQQQ QQ Q  QQ QQQ QQQ      QQ  QQ      Q +  Q L + 
Sbjct: 460 ----------QQQQLQQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQ 509

Query: 683 PLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHS-VVGQNTGPSP---SPNPCSNPNTG 738
              LQQ+L LQQ+Q+        Q   Q    QHS V  Q T P P   SP P S  +  
Sbjct: 510 ---LQQRLQLQQLQHM-------QHQSQPSPRQHSPVASQITSPIPAIGSPQPASQQHQS 559

Query: 739 SGYMNSQQSLLNQ 751
                +Q  +L+Q
Sbjct: 560 QIQSQTQTQVLSQ 572



 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 54/167 (32%), Positives = 66/167 (39%), Gaps = 67/167 (40%)

Query: 633 QSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLL 692
           Q S S Q QQ Q Q QQQQQQQQQQ QQ QQQQ                    LQQ  + 
Sbjct: 431 QVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQ--------------------LQQHQMH 470

Query: 693 QQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQ 752
           QQ+Q             QQ Q QH                             Q  + Q 
Sbjct: 471 QQIQ-------------QQMQQQHF----------------------------QHHMQQH 489

Query: 753 LMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPP 799
           L  ++Q LQ+QI +Q+ Q  LQQ++         Q Q  +H S+P P
Sbjct: 490 LQQQQQHLQQQINQQQLQQQLQQRLQLQ------QLQHMQHQSQPSP 530



 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 40/146 (27%), Positives = 54/146 (36%), Gaps = 4/146 (2%)

Query: 516 KAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVL 575
           +  PS Q     + +QQ+ Q   +         ++  Q + +             M   L
Sbjct: 431 QVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQHFQHHMQQHL 490

Query: 576 PSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSS 635
             Q +       QQQ QQQ QQ+ Q QQ Q  Q Q Q   +Q     S  A Q      +
Sbjct: 491 QQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQH----SPVASQITSPIPA 546

Query: 636 ISAQQQQQQQQQQQQQQQQQQQQQQQ 661
           I + Q   QQ Q Q Q Q Q Q   Q
Sbjct: 547 IGSPQPASQQHQSQIQSQTQTQVLSQ 572



 Score = 31.2 bits (69), Expect = 6.0
 Identities = 35/200 (17%), Positives = 73/200 (36%), Gaps = 15/200 (7%)

Query: 603 QQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQ 662
           ++Q+Q  +++ +  +++   +++A +      + +   + Q  +  QQ            
Sbjct: 298 EEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLL 357

Query: 663 QQQPSSQPAQSLPSQPLLRSPLPLQ---QKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVV 719
              P SQ      S   L+  LP     + L ++   NQ +  +    +         + 
Sbjct: 358 LNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLIS 417

Query: 720 GQNT---GPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQ 776
              T   G +PS     +  T    M  QQ         ++Q  Q+Q+ + +QQ L Q Q
Sbjct: 418 SMGTTMVGSAPSTQVSPSVQTQQHQMQLQQ---------QQQQQQQQMQQMQQQQLQQHQ 468

Query: 777 MLADAEKIAPQDQINRHLSR 796
           M    ++   Q     H+ +
Sbjct: 469 MHQQIQQQMQQQHFQHHMQQ 488


>gi|4507379 TATA box binding protein [Homo sapiens]
          Length = 339

 Score = 94.4 bits (233), Expect = 6e-19
 Identities = 65/142 (45%), Positives = 73/142 (51%), Gaps = 24/142 (16%)

Query: 544 NPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQ 603
           +P  AM P      P+  + +    Q      P QN  SL    ++QQ+QQQQQQQQQQQ
Sbjct: 16  SPQGAMTPGIPIFSPMMPYGTGLTPQ------PIQNTNSL-SILEEQQRQQQQQQQQQQQ 68

Query: 604 QQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQ 663
           QQQQQQQQQQQQQQQQQQ                 QQQQQQQQQ       QQ   QQ  
Sbjct: 69  QQQQQQQQQQQQQQQQQQ-----------------QQQQQQQQQAVAAAAVQQSTSQQAT 111

Query: 664 QQPSSQPAQSLPSQPLLRSPLP 685
           Q  S Q  Q   SQ L  +PLP
Sbjct: 112 QGTSGQAPQLFHSQTLTTAPLP 133



 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 50/141 (35%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 628 QQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQ 687
           Q     S +  QQ+QQQQQQQQQQQQQQQQQQQQQQQQ   Q  Q    Q    +   +Q
Sbjct: 44  QNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQ 103

Query: 688 QKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSP-------NPCSNPNTGSG 740
           Q     Q   Q  +G   Q+   Q      + G  T   PSP        P +  +  SG
Sbjct: 104 QS--TSQQATQGTSGQAPQLFHSQTLTTAPLPG-TTPLYPSPMTPMTPITPATPASESSG 160

Query: 741 YMNSQQSLLNQQLMGKKQTLQ 761
            +   Q++++   +G K  L+
Sbjct: 161 IVPQLQNIVSTVNLGCKLDLK 181



 Score = 32.7 bits (73), Expect = 2.0
 Identities = 53/212 (25%), Positives = 81/212 (38%), Gaps = 16/212 (7%)

Query: 724 GPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEK 783
           G   +P P  N N+ S     Q+    QQ   ++Q  Q+Q  +Q+QQ   QQQ     ++
Sbjct: 35  GTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ-----QQ 89

Query: 784 IAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQAL-ANPVSTHTIL 842
              Q Q     +      +   +      P   +S   +T  L     L  +P++  T +
Sbjct: 90  QQQQQQAVAAAAVQQSTSQQATQGTSGQAPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPI 149

Query: 843 TPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLAN 902
           TP ++  S S G  +P L   V  +    NL C        T  +     + NPK+  A 
Sbjct: 150 TP-ATPASESSGI-VPQLQNIVSTV----NLGCKLD---LKTIALRARNAEYNPKRFAAV 200

Query: 903 QNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQ 934
                 PR   L  S+   V T GA S   S+
Sbjct: 201 IMRIREPRTTALIFSSGKMVCT-GAKSEEQSR 231


>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
          Length = 2063

 Score = 91.3 bits (225), Expect = 5e-18
 Identities = 168/696 (24%), Positives = 232/696 (33%), Gaps = 128/696 (18%)

Query: 493  QSSPMPGVAGGSGQSKVMANYMYKAGPSA--QGGHLDVLMQQKPQDLSRSFINNPHPAME 550
            Q   M G  G     ++ A +   +GP          V++       S      P+P ++
Sbjct: 145  QDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPATVMIPPGGNVSSSMMAPGPNPELQ 204

Query: 551  PRQGNTKP--------LFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQ----QQQQQQ 598
            PR              L   +  Q +    S+ P  +    +   +Q       Q QQQQ
Sbjct: 205  PRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQ 264

Query: 599  QQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQ 658
            QQQQQQQQQQQQQQQQQQQQQ Q+    Q QQQQ   I  Q     Q        Q    
Sbjct: 265  QQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSG 324

Query: 659  QQQQQQQPSSQPAQSLPSQPLLRSPLP------LQQKLLLQQMQNQPIAGMGYQVSQQQR 712
              Q      S    +  +Q   ++PLP      LQ +  L  +Q        Y    QQ 
Sbjct: 325  ALQPPPAQGSLGTMT-ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQA 383

Query: 713  QDQH------SVVGQNT---------GPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKK 757
               H      S  GQ T         GPS  P P   P+  +    S  S   Q      
Sbjct: 384  SQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASS 443

Query: 758  QTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQ-INRHLSRP-----------PPDYKDQR 805
             T+ +           QQQM     +  P  Q   + +S P           PP++   +
Sbjct: 444  PTVNQ----------TQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMVMQ 493

Query: 806  RNVGNMQPTAQYSG----------GSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGT 855
            +   N  P + + G          G S    N N  +   V + T  TP +S      G 
Sbjct: 494  QQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPN-FMQGQVPSTTATTPGNS------GA 546

Query: 856  RMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQNNPMMPRPPTLG 915
                 +  VQ+ G  G  P             NQ+     P         P M +P  +G
Sbjct: 547  PQLQANQNVQHAGGQGAGP-----------PQNQMQVSHGP---------PNMMQPSLMG 586

Query: 916  PSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPNWASQEGT-SK 974
               N N     AG+ G  Q    N+       PP +   +      +      Q+GT + 
Sbjct: 587  IHGNMN--NQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNP 644

Query: 975  QQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTP---AVQMRPMNQ 1031
            Q   + S     P G      P+Q+L         S + + PP Q+        M P NQ
Sbjct: 645  QNPMILSRAQLMPQGQMMVNPPSQNLGP-------SPQRMTPPKQMLSQQGPQMMAPHNQ 697

Query: 1032 MSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPPSLTPSNF---P 1088
            M        MGP   + L+ N +  QI+ N  Q       ++   N  P   P+     P
Sbjct: 698  M--------MGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPG--PAQIMRGP 747

Query: 1089 SPNQSSRAFQGTDHSSDLAFDFLSQQNDNMGPALNS 1124
            +PN      Q T   S        Q     GP  NS
Sbjct: 748  TPNMQGNMVQFTGQMS-------GQMLPQQGPVNNS 776



 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 233/1110 (20%), Positives = 369/1110 (33%), Gaps = 198/1110 (17%)

Query: 97   ATAATTTAPPPP-PAAPPAASQAAATAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQ 155
            AT  T + PPPP P     ASQA         P      Q   + S   G S      QQ
Sbjct: 364  ATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQ---MKSLQGGPSRVPTPLQQ 420

Query: 156  P------PASTPGD-QRNSALIALQGSLKRKQVVNLSPANSKRPNGFVDNSFLDIKRIRV 208
            P      PAS+P   Q+ S   +   +  ++Q+    P N+  P GF             
Sbjct: 421  PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSP------ 474

Query: 209  GENLSAGQGGLQINNGQSQIMSGTLPMSQAPLRKTNTLPSHTHSPGNGL-------FNMG 261
            G N    QG +  N          + M Q P    N  P   H    G+       F+ G
Sbjct: 475  GRNPMVQQGNVPPN---------FMVMQQQP---PNQGPQSLHPGLGGMPKRLPPGFSAG 522

Query: 262  LKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQLMDPELQEL--FNELTNISVP 319
                    G+  S +    G      +  N+     G Q   P   ++   +   N+  P
Sbjct: 523  QANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQP 582

Query: 320  PMSDLELENMINATIKQDDPFNIDLGQ---QSQRSTPRPSLPMEKIVIKSEYSPGLTQG- 375
             +  +   NM N          ++L     Q Q+  P   + M + ++ S+      QG 
Sbjct: 583  SLMGIH-GNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGT 641

Query: 376  ---------------PSGSPQLRPPSA--GPA---FSMANSALSTSSPIPSVPQSQAQPQ 415
                           P G   + PPS   GP+    +     LS   P    P +Q    
Sbjct: 642  LNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGP 701

Query: 416  TGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPF 475
             G    +  P          ++QI  N+ Q  + Q + Q              GP+P   
Sbjct: 702  QGQVLLQQNP---------MIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQ 752

Query: 476  GQE-KIPSPSFGQQTFSPQSSPMPG----VAGGSGQ-------SKVMANYMYKAGPSAQG 523
            G   +      GQ    PQ  P+      V G  GQ       S  MA    + G  A  
Sbjct: 753  GNMVQFTGQMSGQML--PQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQ---QHGDPATT 807

Query: 524  GHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMP-SVLPSQNKPS 582
             + DV + Q   D+S    N   P ++  QGN+    HF+    +   P S  P+ N+ S
Sbjct: 808  ANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMS 867

Query: 583  LLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQ 642
                            Q       +             QS ISA            Q   
Sbjct: 868  C--------------GQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNK----QNNT 909

Query: 643  QQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQ-------QM 695
               + ++++  ++++  QQ    P ++PA    +    + PLP +Q + L        + 
Sbjct: 910  NANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEAD---QPPLPGEQGINLDNSGPKLPEF 966

Query: 696  QNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMG 755
             N+P       V Q+  Q     + Q+  P P P P   P          Q    QQ   
Sbjct: 967  SNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQP-PQQQPQP--------QLPQQQQPPP 1017

Query: 756  KKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQR---RNVGNMQ 812
              Q   +Q  +Q+QQ+++   M  D + +      N H  R P +   QR   +  G++ 
Sbjct: 1018 PSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVP 1077

Query: 813  PTAQYSGGSSTISLNSNQALANPVST------------HTILTPNSSLLS------TSHG 854
                  G +S       Q +  PV+T             +   P+SS L+       + G
Sbjct: 1078 VMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASG 1137

Query: 855  TRMPSLSTAVQNMGMYGNLPCNQ---------PNTYSVTSG-------MNQL-------- 890
            +  PS+     NM  +  LP NQ         P+  S T G       +N L        
Sbjct: 1138 SEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHF 1197

Query: 891  ------TQQRNPKQLLANQNNPMMP-----RPPTLGPSN--------NNNVATFGAGSVG 931
                  TQ   PK        P  P     RPP+  PS         N ++A      + 
Sbjct: 1198 PNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQIN 1257

Query: 932  NSQQLRPNLTHSMASMPPQRTSNVMI----TSNTTAPNWASQEGTSKQQEALTSAGVRFP 987
                 RPNL           T+   I    ++ T  P+  +   T K    + ++G +  
Sbjct: 1258 IPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSN 1317

Query: 988  TGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRPMNQMSQTLNGQTMGPLRGL 1047
            +G     +P+ S + + GS +  +   +P  Q + A ++   +Q +  L      P R +
Sbjct: 1318 SGATKRASPSNSRRSSPGSSR--KTTPSPGRQNSKAPKLTLASQTNAALLQNVELP-RNV 1374

Query: 1048 NLRPNQLSTQILPNLNQSGTGLNQSRTGIN 1077
             + P  L+   +P    + +GLN   + ++
Sbjct: 1375 LVSPTPLANPPVPGSFPNNSGLNPQNSTVS 1404



 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 191/847 (22%), Positives = 283/847 (33%), Gaps = 140/847 (16%)

Query: 346  QQSQRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIP 405
            QQ Q+  P+   P      +    PG  Q PSG+ Q  PP+ G   +M  +     +P+P
Sbjct: 292  QQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQ-PPPAQGSLGTMTANQGWKKAPLP 350

Query: 406  SVPQSQAQ------------------PQTGSGASRALPSWQEVSHAQQL--KQIAANRQQ 445
               Q Q Q                  P     AS+A  ++ ++S+  Q    Q+ + +  
Sbjct: 351  GPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGG 410

Query: 446  HARMQQHQQQHQPTNWSALPS-------SAGPSP---------GPFGQEKIPSP-SFGQQ 488
             +R+    QQ   TN S   S       S   SP         GP   +  P P  F Q 
Sbjct: 411  PSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQP 470

Query: 489  TFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSR-----SFIN 543
              SP  +PM           VM       GP +    L  + ++ P   S      +F+ 
Sbjct: 471  VSSPGRNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQ 530

Query: 544  NPHPA-MEPRQGNT-KPLFHFNSD------------QANQQMPSVLPSQNKPSLLHYTQQ 589
               P+      GN+  P    N +            Q   Q+    P+  +PSL+     
Sbjct: 531  GQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGN 590

Query: 590  QQQQQQ-----QQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQ 644
               QQ       Q      Q Q QQ    Q     QQ   S  Q  QQQ +++ Q     
Sbjct: 591  MNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMIL 650

Query: 645  QQQQQQQQQQQQQQQQQQQQQPSSQ----PAQSLPSQ-PLLRSP----------LPLQQK 689
             + Q   Q Q       Q   PS Q    P Q L  Q P + +P          + LQQ 
Sbjct: 651  SRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQN 710

Query: 690  LLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQ-NTGPSPSPNPCSNPNTG--SGYMNSQQ 746
             +++Q+    + G   Q + Q + +      Q   GP+P+        TG  SG M  QQ
Sbjct: 711  PMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQ 770

Query: 747  SLLN---QQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKD 803
              +N    Q+MG    +Q Q++          Q   D    A  D     LS+  PD   
Sbjct: 771  GPVNNSPSQVMG----IQGQVLRPPGPSPHMAQQHGDPATTANNDV---SLSQMMPDVSI 823

Query: 804  QRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRMPSLSTA 863
            Q+ N+  + P  Q        ++  N A  N  S H  ++ N+      +G +M      
Sbjct: 824  QQTNM--VPPHVQ--------AMQGNSASGNHFSGHG-MSFNAPFSGAPNGNQM------ 866

Query: 864  VQNMGMYGNLPCNQPNTYSVTSGMNQLTQQ-------RNPKQLLANQNNPMMPRPPTLGP 916
              + G     P N+  T +    +N L           N KQ   N N P   +PP    
Sbjct: 867  --SCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKK 924

Query: 917  SNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPNWASQEGTSKQQ 976
            ++  ++ T      G  +  +P L              +   SN   P + SQ    +  
Sbjct: 925  NSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLPEFSN-RPPGYPSQPVEQRPL 983

Query: 977  EALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRPMNQMSQTL 1036
            + +       P        P Q  QQ    Q   Q+   PP+Q     Q +   QM   L
Sbjct: 984  QQMP------PQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMML 1037

Query: 1037 N------------GQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTG-INQPPSLT 1083
                          Q + P RG    P    +Q +P        +  S  G  + PPS  
Sbjct: 1038 MMQQDPKSVRLPVSQNVHPPRG----PLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPD 1093

Query: 1084 PSNFPSP 1090
                P P
Sbjct: 1094 KQRMPMP 1100



 Score = 63.9 bits (154), Expect = 8e-10
 Identities = 139/658 (21%), Positives = 217/658 (32%), Gaps = 121/658 (18%)

Query: 519  PSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQ 578
            P  QG +LD    + P+     F N P P    +    +PL         QQMP  L   
Sbjct: 949  PGEQGINLDNSGPKLPE-----FSNRP-PGYPSQPVEQRPL---------QQMPPQLMQH 993

Query: 579  NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISA 638
              P      Q  QQQ Q Q  QQQQ     Q Q QQQQQQQQQ  +    QQ  +S    
Sbjct: 994  VAPP----PQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLP 1049

Query: 639  QQQQQQQQQQQQQQQQQQQQQQQQQQQP----SSQPAQSLPSQPLLRSPLPL-------Q 687
              Q     +       Q+   QQ    P       PA   PS    R P+P+        
Sbjct: 1050 VSQNVHPPRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNS 1109

Query: 688  QKLLLQQMQNQPIAGMGYQVSQ---------------QQRQDQHSVVGQN----TGPSPS 728
            +K++ Q+    P +    +++                      H V+ QN    TGP P 
Sbjct: 1110 RKMVYQESPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPG 1169

Query: 729  PNPCSN----------------------PNTGSGYMNSQQSLLN----QQLMGKKQTLQR 762
            P+P S                       PN  +    S+    N    +    +    + 
Sbjct: 1170 PSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRP 1229

Query: 763  QIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSS 822
               E  +  L  +++ A    + P  QIN  +  PP    ++  +   + PT   + G +
Sbjct: 1230 PSTEPSEISLSPERLNASIAGLFP-PQIN--IPLPPRPNLNRGFDQQGLNPTTLKAIGQA 1286

Query: 823  TISLNSNQALANPVSTHTI--LTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNT 880
              +L  N +      TH +  +  NS   S S  T+  S S + ++           P  
Sbjct: 1287 PSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGATKRASPSNSRRSSPGSSRKTTPSPGR 1346

Query: 881  YSVTSGMNQLTQQRN---------PKQLLANQNNPMMPRPPTLGPSN------NNNVATF 925
             +  +    L  Q N         P+ +L +      P  P   P+N      N+ V+  
Sbjct: 1347 QNSKAPKLTLASQTNAALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVA 1406

Query: 926  GAGSV----------------GNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPNWASQ 969
              G V                 NSQ  +  +   + ++P Q    V+        + + +
Sbjct: 1407 AVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIELKAVPAQEVKMVV------PEDQSKK 1460

Query: 970  EGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRPM 1029
            +G       L S        +PA      SL Q + +       + PP  LT      P+
Sbjct: 1461 DGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGAPNVTIKPPG-LTDLEVTPPV 1519

Query: 1030 NQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGL---NQSRTGINQPPSLTP 1084
                       +  L+ L+      ++  LP+ N+  + L     S    N  PS+ P
Sbjct: 1520 VSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPP 1577



 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 156/705 (22%), Positives = 220/705 (31%), Gaps = 156/705 (22%)

Query: 376 PSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVS---- 431
           P  +P+L+P +  PA     S      P+ S    Q Q       +      Q VS    
Sbjct: 197 PGPNPELQPRTPRPA-----SQSDAMDPLLSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQ 251

Query: 432 ------------HAQQLKQIAANRQQHARMQQHQ------QQHQ---------------- 457
                         QQ +Q    +QQ  + QQ Q      QQHQ                
Sbjct: 252 MNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQ 311

Query: 458 ---PTNWSALPSSA---------------------GPSPGPFGQEKIPSPSFGQQTFSPQ 493
              P  W+ LPS A                      P PGP  Q+    PS      +P 
Sbjct: 312 VPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARPSLA-TVQTPS 370

Query: 494 SSPMPGVAGGSGQSKVMANYMYKAGP---------SAQGGHLDVLMQQKPQDLSRSFINN 544
             P P   G    S+   N+   + P         S QGG   V     P  L +  + N
Sbjct: 371 HPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRV-----PTPLQQPHLTN 425

Query: 545 PHPAMEP---RQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQ 601
             PA  P   +QG+  P      +Q  QQM    P QN P    + Q      +    QQ
Sbjct: 426 KSPASSPSSFQQGS--PASSPTVNQTQQQM-GPRPPQNNPLPQGFQQPVSSPGRNPMVQQ 482

Query: 602 QQQQQQQQQQQQQQQQQQQQS--------------SISAQQ-----QQQQQSSISAQQQQ 642
                     QQQ   Q  QS                SA Q      Q Q  S +A    
Sbjct: 483 GNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATTPG 542

Query: 643 QQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLL---QQMQNQP 699
                Q Q  Q  Q    Q    P +Q   S         P  + Q  L+     M NQ 
Sbjct: 543 NSGAPQLQANQNVQHAGGQGAGPPQNQMQVS-------HGPPNMMQPSLMGIHGNMNNQQ 595

Query: 700 IAGMG---YQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGK 756
               G     +S  Q Q Q     Q  G      P        G M  QQ  LN      
Sbjct: 596 AGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVP------SQGQMVQQQGTLNP----- 644

Query: 757 KQTLQRQIMEQKQQLLLQQQMLAD--AEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPT 814
               Q  ++  + QL+ Q QM+ +  ++ + P  Q        PP     ++    M P 
Sbjct: 645 ----QNPMILSRAQLMPQGQMMVNPPSQNLGPSPQ-----RMTPPKQMLSQQGPQMMAPH 695

Query: 815 AQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 874
            Q  G    + L  N  +   + T+ +        + +    MP  +       M G  P
Sbjct: 696 NQMMGPQGQVLLQQN-PMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQI-----MRGPTP 749

Query: 875 CNQPNTYSVTSGMN--QLTQQ----RNPKQLLANQNNPMMPRPPTLGPSNNNNVATFGAG 928
             Q N    T  M+   L QQ     +P Q++  Q   + P  P+   +  +      A 
Sbjct: 750 NMQGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTAN 809

Query: 929 SVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPNWASQEGTS 973
           +  +  Q+ P+++    +M P       +  N+ + N  S  G S
Sbjct: 810 NDVSLSQMMPDVSIQQTNMVPPHVQ--AMQGNSASGNHFSGHGMS 852


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 177/779 (22%), Positives = 258/779 (33%), Gaps = 152/779 (19%)

Query: 365  KSEYSPGLTQGPSGSPQLRPPSAGPAFSMAN-----SALSTSSPIPSVPQSQAQPQTGSG 419
            +S Y P        SP+   P +G A +  +     S+ S SS   S  Q +     G G
Sbjct: 219  RSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGG 278

Query: 420  ASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEK 479
             S A     + +    L Q+  +        +  Q +   ++S  P   G   GP     
Sbjct: 279  PSAAGGGTPQPTATPTLNQLLTSPSS----ARGYQGYPGGDYSGGPQDGGAGKGPADMAS 334

Query: 480  -----------IPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDV 528
                         + S G Q  S  +   PG +GG GQ   +A     + P  Q G    
Sbjct: 335  QCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQP--LARTPQPSSPMDQMGK--- 389

Query: 529  LMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSL--LHY 586
             M+ +P   +  +     P   P+QG+  P   + S Q  Q+ P  +  + + ++  L Y
Sbjct: 390  -MRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS-QTPQRYPMTMQGRAQSAMGGLSY 447

Query: 587  TQQ-------------QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQ- 632
            TQQ             QQ Q     QQ    QQQQ    QQ   Q   +  S QQQ Q  
Sbjct: 448  TQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQ 507

Query: 633  ----QSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQ 688
                QSS     QQ  Q   QQ       QQ   QQ P SQP     SQP  +SP   QQ
Sbjct: 508  PPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPY---SQPQAQSPYQQQQ 564

Query: 689  KLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSL 748
                QQ     ++        Q +Q Q +   Q   P P                     
Sbjct: 565  P---QQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQE------------------- 602

Query: 749  LNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNV 808
            L+Q   G + +    +   K                  Q+ +N  L   P    D   ++
Sbjct: 603  LSQDSFGSQASSAPSMTSSK----------------GGQEDMNLSLQSRPSSLPDLSGSI 646

Query: 809  --------GNMQPTAQYSGGSSTISLNSNQALANPVSTHT----------ILTPNSSLLS 850
                    G + P    SG SS+    SN A  +P S HT            +P  S  S
Sbjct: 647  DDLPMGTEGALSPGVSTSGISSSQGEQSNPA-QSPFSPHTSPHLPGIRGPSPSPVGSPAS 705

Query: 851  TSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQNNPMMPR 910
             +     P    AV    M    P  Q ++    S MNQ +  ++   +   Q NP MP+
Sbjct: 706  VAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPS-MNQSSIAQDRGYM---QRNPQMPQ 761

Query: 911  PPTLGPSNNNNVATFGAGSV----GNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPNW 966
              +  P +  +      G +    G+ QQ      +SM S  PQ               +
Sbjct: 762  YSSPQPGSALSPRQPSGGQIHTGMGSYQQ------NSMGSYGPQ------------GGQY 803

Query: 967  ASQEGTSKQQEALTSAGVRFPT-GTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPA-V 1024
              Q G  +Q          +P+ G      P  +  Q  G          PP +++ A +
Sbjct: 804  GPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASM 863

Query: 1025 QMRP----MNQMSQTLNGQTMGPLRGLNLRPNQLSTQI-------------LPNLNQSG 1066
              RP    M  M   +      P  G+N +  + +  +              PN+NQ G
Sbjct: 864  GNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGG 922



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 73/321 (22%), Positives = 113/321 (35%), Gaps = 55/321 (17%)

Query: 380  PQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQI 439
            P+++PPS   + SM           P  PQS +      G  +  P+     H+Q     
Sbjct: 1128 PKIQPPSPAGSGSMQG---------PQTPQSTSSSMAEGGDLKP-PTPASTPHSQIPPLP 1177

Query: 440  AANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPG 499
              +R     +Q        + +    +S  P+PG +      S   G+ ++ P   P   
Sbjct: 1178 GMSRSNSVGIQDAFNDGSDSTFQKR-NSMTPNPG-YQPSMNTSDMMGRMSYEPNKDPYGS 1235

Query: 500  VAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQG----- 554
            +    G    M++     G    GG  D   +     L        + AM PRQ      
Sbjct: 1236 MRKAPGSDPFMSS-----GQGPNGGMGDPYSRAAGPGLG-------NVAMGPRQHYPYGG 1283

Query: 555  -----NTKPLFHFNSDQAN-QQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQ------- 601
                  T+P      + +     P+++PS     +   ++   QQQQQQQQ+        
Sbjct: 1284 PYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQF 1343

Query: 602  -------------QQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQ 648
                         QQ    QQQQQ  ++         A++ + +  S+     Q Q QQQ
Sbjct: 1344 STQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQ 1403

Query: 649  QQQQQQQQQQQQQQQQQPSSQ 669
            Q    Q Q   QQQ  QPS Q
Sbjct: 1404 QLPPAQPQPASQQQAAQPSPQ 1424



 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 163/764 (21%), Positives = 236/764 (30%), Gaps = 133/764 (17%)

Query: 6   PPQAPAGGL----GGASGAGLLGG-GSVTPRVHSAIVERLRARIAVCRQHHLSCEGRYER 60
           PP APA  L    GG  G+G     GS  P   SA      +  A  R   +   G    
Sbjct: 223 PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAA 282

Query: 61  GRAESSDRERESTLQLLSLVQHGQGAR--KAGKHTKATATAATTTAPPPPPAAPPAASQA 118
           G          +  QLL+     +G +    G ++           P    +    A+ A
Sbjct: 283 GGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAA 342

Query: 119 AATAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQRNSALIALQGSLKR 178
           AA AA          H  H   S  + G GG    + P  S+P DQ         G    
Sbjct: 343 AAAAAAASGGAQQRSH--HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNP 400

Query: 179 KQVVNLSPANSKRPNGFVDNSFLDIKRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQA 238
                  P+  ++ +G+    +                 G Q        M G    +  
Sbjct: 401 YSQQQGPPSGPQQGHGYPGQPY-----------------GSQTPQRYPMTMQGRAQSAMG 443

Query: 239 PLRKTNTLPSHTHSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPG 298
            L  T  +P +     +G    G      +       S H   Q          Y   P 
Sbjct: 444 GLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQ------SPHPQQQQPP-------YSQQPP 490

Query: 299 EQLMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLP 358
            Q   P  Q  + +      P +   +             P++    Q   + +P P   
Sbjct: 491 SQT--PHAQPSYQQQPQSQPPQLQSSQ------------PPYSQQPSQPPHQQSPAPYPS 536

Query: 359 MEKIVIKSEYSPGLTQGPSGSPQLRPP-SAGPAFSMANSALSTSSPIPSVPQSQAQPQTG 417
            +    +   S    Q P   PQ + P         A S LS  +  P  PQSQ   QT 
Sbjct: 537 QQSTTQQHPQS----QPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQ-PQSQQSQQTA 591

Query: 418 SGASRALPSWQEVSHAQQLKQIAANRQQHARM--QQHQQQHQPTNWSALPSSAGPSPG-P 474
               R  P  QE+S      Q ++     +    Q+       +  S+LP  +G     P
Sbjct: 592 YSQQR-FPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLP 650

Query: 475 FGQEKIPSP---------SFGQQT------FSPQSSP-MPGVAGGSGQSKVMANYMYKAG 518
            G E   SP         S G+Q+      FSP +SP +PG+ G S              
Sbjct: 651 MGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPS-------------- 696

Query: 519 PSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQ 578
           PS  G          P  +++S      PA  P  GN              QMP   PS 
Sbjct: 697 PSPVGS---------PASVAQSRSGPLSPAAVP--GN--------------QMPPRPPSG 731

Query: 579 NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQ--QQQSSI 636
              S++H          Q    Q +   Q+  Q  Q    Q  S++S +Q    Q  + +
Sbjct: 732 QSDSIMH------PSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGM 785

Query: 637 SAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQ 696
            + QQ        Q  Q   Q    +Q   ++ P  + PS  +     P+       QM 
Sbjct: 786 GSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAG---GQMH 842

Query: 697 NQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSG 740
            QP     Y      R    S+  +  GP+ +  P   P  GSG
Sbjct: 843 GQP-GIPPYGTLPPGRMSHASMGNRPYGPNMANMP---PQVGSG 882


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 177/779 (22%), Positives = 258/779 (33%), Gaps = 152/779 (19%)

Query: 365  KSEYSPGLTQGPSGSPQLRPPSAGPAFSMAN-----SALSTSSPIPSVPQSQAQPQTGSG 419
            +S Y P        SP+   P +G A +  +     S+ S SS   S  Q +     G G
Sbjct: 219  RSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGG 278

Query: 420  ASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEK 479
             S A     + +    L Q+  +        +  Q +   ++S  P   G   GP     
Sbjct: 279  PSAAGGGTPQPTATPTLNQLLTSPSS----ARGYQGYPGGDYSGGPQDGGAGKGPADMAS 334

Query: 480  -----------IPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDV 528
                         + S G Q  S  +   PG +GG GQ   +A     + P  Q G    
Sbjct: 335  QCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQP--LARTPQPSSPMDQMGK--- 389

Query: 529  LMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSL--LHY 586
             M+ +P   +  +     P   P+QG+  P   + S Q  Q+ P  +  + + ++  L Y
Sbjct: 390  -MRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS-QTPQRYPMTMQGRAQSAMGGLSY 447

Query: 587  TQQ-------------QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQ- 632
            TQQ             QQ Q     QQ    QQQQ    QQ   Q   +  S QQQ Q  
Sbjct: 448  TQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQ 507

Query: 633  ----QSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQ 688
                QSS     QQ  Q   QQ       QQ   QQ P SQP     SQP  +SP   QQ
Sbjct: 508  PPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPY---SQPQAQSPYQQQQ 564

Query: 689  KLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSL 748
                QQ     ++        Q +Q Q +   Q   P P                     
Sbjct: 565  P---QQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQE------------------- 602

Query: 749  LNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNV 808
            L+Q   G + +    +   K                  Q+ +N  L   P    D   ++
Sbjct: 603  LSQDSFGSQASSAPSMTSSK----------------GGQEDMNLSLQSRPSSLPDLSGSI 646

Query: 809  --------GNMQPTAQYSGGSSTISLNSNQALANPVSTHT----------ILTPNSSLLS 850
                    G + P    SG SS+    SN A  +P S HT            +P  S  S
Sbjct: 647  DDLPMGTEGALSPGVSTSGISSSQGEQSNPA-QSPFSPHTSPHLPGIRGPSPSPVGSPAS 705

Query: 851  TSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQNNPMMPR 910
             +     P    AV    M    P  Q ++    S MNQ +  ++   +   Q NP MP+
Sbjct: 706  VAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPS-MNQSSIAQDRGYM---QRNPQMPQ 761

Query: 911  PPTLGPSNNNNVATFGAGSV----GNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPNW 966
              +  P +  +      G +    G+ QQ      +SM S  PQ               +
Sbjct: 762  YSSPQPGSALSPRQPSGGQIHTGMGSYQQ------NSMGSYGPQ------------GGQY 803

Query: 967  ASQEGTSKQQEALTSAGVRFPT-GTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPA-V 1024
              Q G  +Q          +P+ G      P  +  Q  G          PP +++ A +
Sbjct: 804  GPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASM 863

Query: 1025 QMRP----MNQMSQTLNGQTMGPLRGLNLRPNQLSTQI-------------LPNLNQSG 1066
              RP    M  M   +      P  G+N +  + +  +              PN+NQ G
Sbjct: 864  GNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGG 922



 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 163/764 (21%), Positives = 236/764 (30%), Gaps = 133/764 (17%)

Query: 6   PPQAPAGGL----GGASGAGLLGG-GSVTPRVHSAIVERLRARIAVCRQHHLSCEGRYER 60
           PP APA  L    GG  G+G     GS  P   SA      +  A  R   +   G    
Sbjct: 223 PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAA 282

Query: 61  GRAESSDRERESTLQLLSLVQHGQGAR--KAGKHTKATATAATTTAPPPPPAAPPAASQA 118
           G          +  QLL+     +G +    G ++           P    +    A+ A
Sbjct: 283 GGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAA 342

Query: 119 AATAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTPGDQRNSALIALQGSLKR 178
           AA AA          H  H   S  + G GG    + P  S+P DQ         G    
Sbjct: 343 AAAAAAASGGAQQRSH--HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNP 400

Query: 179 KQVVNLSPANSKRPNGFVDNSFLDIKRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQA 238
                  P+  ++ +G+    +                 G Q        M G    +  
Sbjct: 401 YSQQQGPPSGPQQGHGYPGQPY-----------------GSQTPQRYPMTMQGRAQSAMG 443

Query: 239 PLRKTNTLPSHTHSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPG 298
            L  T  +P +     +G    G      +       S H   Q          Y   P 
Sbjct: 444 GLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQ------SPHPQQQQPP-------YSQQPP 490

Query: 299 EQLMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLP 358
            Q   P  Q  + +      P +   +             P++    Q   + +P P   
Sbjct: 491 SQT--PHAQPSYQQQPQSQPPQLQSSQ------------PPYSQQPSQPPHQQSPAPYPS 536

Query: 359 MEKIVIKSEYSPGLTQGPSGSPQLRPP-SAGPAFSMANSALSTSSPIPSVPQSQAQPQTG 417
            +    +   S    Q P   PQ + P         A S LS  +  P  PQSQ   QT 
Sbjct: 537 QQSTTQQHPQS----QPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQ-PQSQQSQQTA 591

Query: 418 SGASRALPSWQEVSHAQQLKQIAANRQQHARM--QQHQQQHQPTNWSALPSSAGPSPG-P 474
               R  P  QE+S      Q ++     +    Q+       +  S+LP  +G     P
Sbjct: 592 YSQQR-FPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLP 650

Query: 475 FGQEKIPSP---------SFGQQT------FSPQSSP-MPGVAGGSGQSKVMANYMYKAG 518
            G E   SP         S G+Q+      FSP +SP +PG+ G S              
Sbjct: 651 MGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPS-------------- 696

Query: 519 PSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQ 578
           PS  G          P  +++S      PA  P  GN              QMP   PS 
Sbjct: 697 PSPVGS---------PASVAQSRSGPLSPAAVP--GN--------------QMPPRPPSG 731

Query: 579 NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQ--QQQSSI 636
              S++H          Q    Q +   Q+  Q  Q    Q  S++S +Q    Q  + +
Sbjct: 732 QSDSIMH------PSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGM 785

Query: 637 SAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQ 696
            + QQ        Q  Q   Q    +Q   ++ P  + PS  +     P+       QM 
Sbjct: 786 GSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAG---GQMH 842

Query: 697 NQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSG 740
            QP     Y      R    S+  +  GP+ +  P   P  GSG
Sbjct: 843 GQP-GIPPYGTLPPGRMSHASMGNRPYGPNMANMP---PQVGSG 882



 Score = 42.4 bits (98), Expect = 0.003
 Identities = 63/316 (19%), Positives = 106/316 (33%), Gaps = 38/316 (12%)

Query: 380  PQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQI 439
            P+++PPS   + SM           P  PQS +      G  +  P+     H+Q     
Sbjct: 1128 PKIQPPSPAGSGSMQG---------PQTPQSTSSSMAEGGDLKP-PTPASTPHSQIPPLP 1177

Query: 440  AANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPG 499
              +R     +Q        + +    +S  P+PG +      S   G+ ++ P   P   
Sbjct: 1178 GMSRSNSVGIQDAFNDGSDSTFQKR-NSMTPNPG-YQPSMNTSDMMGRMSYEPNKDPYGS 1235

Query: 500  VAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQG----- 554
            +    G    M++     G    GG  D   +     L        + AM PRQ      
Sbjct: 1236 MRKAPGSDPFMSS-----GQGPNGGMGDPYSRAAGPGLG-------NVAMGPRQHYPYGG 1283

Query: 555  -----NTKPLFHFNSDQAN-QQMPSVLPSQNKPSLL---HYTQQQQQQQQQQQQQQQQQQ 605
                  T+P      + +     P+++PS     +     Y  QQQQQQQQ+      Q 
Sbjct: 1284 PYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQF 1343

Query: 606  QQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQ 665
              Q          QQ +    QQQ    + +    + +    +        + Q+     
Sbjct: 1344 STQGTPSGSPFPSQQTTMYQQQQQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV 1403

Query: 666  PSSQPAQSLPSQPLLR 681
            P+S  A +    P++R
Sbjct: 1404 PASHIAPAPVQPPMIR 1419



 Score = 32.0 bits (71), Expect = 3.5
 Identities = 27/90 (30%), Positives = 33/90 (36%), Gaps = 31/90 (34%)

Query: 650  QQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQ 709
            QQQQQQQQ+      Q S+Q   S        SP P QQ  + QQ Q             
Sbjct: 1327 QQQQQQQQRHDSYGNQFSTQGTPS-------GSPFPSQQTTMYQQQQ------------- 1366

Query: 710  QQRQDQHSVVGQNTGPSPSPNPCSNPNTGS 739
                       Q + P+P P P  N  + S
Sbjct: 1367 -----------QVSSPAPLPRPMENRTSPS 1385


>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
          Length = 1424

 Score = 87.4 bits (215), Expect = 7e-17
 Identities = 85/272 (31%), Positives = 115/272 (42%), Gaps = 54/272 (19%)

Query: 522  QGGHLDVLMQQKPQDLSRSFINNPHPAM-EPRQGN-----TKPLFHFNSDQANQQMPSVL 575
            QG    V+M QK            +PA   P QG        P F+   +Q NQQ    L
Sbjct: 1096 QGQEAAVMMDQKA-----GLYGQTYPAQGPPMQGGFHLQGQSPSFNSMMNQMNQQGNFPL 1150

Query: 576  -----------PSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQ-----------QQ 613
                       P  N P  L    QQ+ Q QQ   Q +Q  + + +              
Sbjct: 1151 QGMHPRANIMRPRTNTPKQLRMQLQQRLQGQQFLNQSRQALELKMENPTAGGAAVMRPMM 1210

Query: 614  QQQQQQQQSSISAQQQ------------QQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQ 661
            Q Q   QQ  ++AQ              +QQ+ ++  QQQQQQQQQQQQQQQQQQQQQQQ
Sbjct: 1211 QPQVSSQQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQQQQQQ 1270

Query: 662  QQQQPSSQ---PAQSLPSQPLLRSPL--PLQQKLLLQQMQNQPIAGMGYQVSQ---QQRQ 713
            QQQQ  +Q   P  ++ + P +   L  P   +   QQ   QP  GMG Q      +   
Sbjct: 1271 QQQQQQTQAFSPPPNVTASPSMDGLLAGPTMPQAPPQQFPYQPNYGMGQQPDPAFGRVSS 1330

Query: 714  DQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQ 745
              ++++    GPS +P    +P   S Y +S+
Sbjct: 1331 PPNAMMSSRMGPSQNP-MMQHPQAASIYQSSE 1361



 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 142/720 (19%), Positives = 255/720 (35%), Gaps = 96/720 (13%)

Query: 150  INGEQQPPASTPGDQRNSALIALQGSLKRKQVVNLSPANSKRPNGFVDNSFLDIKRIRVG 209
            ++ ++   +S  G +     +  +G  K  Q++  S  +  R +  + NS LD       
Sbjct: 593  LSDKESKESSVEGAENQRGPLESKGHKKLLQLLTCS--SDDRGHSSLTNSPLDSSCKESS 650

Query: 210  ENLSAGQGGLQINNGQSQIMSGTLPMSQAPLRKTNTLPSHTHSPGNGLFNMGLKEVKKEP 269
             ++++  G   +++  S  +S T  M  + L++ + +       GN    +     +   
Sbjct: 651  VSVTSPSG---VSSSTSGGVSSTSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATG 707

Query: 270  GETLSCSKHMDGQMT-QENIFPN--------RY---GDDPGEQL---MDPELQELFNELT 314
             +T S +   DG +  QE + P         RY    DDP + L   + P+++ + N+++
Sbjct: 708  KDTSSITSCGDGNVVKQEQLSPKKKENNALLRYLLDRDDPSDALSKELQPQVEGVDNKMS 767

Query: 315  NI--SVPPMSDLELENMINATIKQDDPFNID-----LGQQSQR-------STPRPSLPME 360
                S  P S  E +  I     ++   ++D     LG  +         S+    L  +
Sbjct: 768  QCTSSTIPSSSQEKDPKIKTETSEEGSGDLDNLDAILGDLTSSDFYNNSISSNGSHLGTK 827

Query: 361  KIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSV---PQSQAQPQTG 417
            + V +   S GL    S    +RPP        +  ++ +S P+ ++   P    QP  G
Sbjct: 828  QQVFQGTNSLGLKSSQSVQ-SIRPPYNRAVSLDSPVSVGSSPPVKNISAFPMLPKQPMLG 886

Query: 418  SGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQ 477
             G  R + S +    +        NR          Q     +W  LP+S      P   
Sbjct: 887  -GNPRMMDSQENYGSSMG----GPNRNVTVT-----QTPSSGDWG-LPNSKAGRMEPMNS 935

Query: 478  EKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDL 537
              +  P     T    S P P + G      + +N +  A P  Q      ++Q +P ++
Sbjct: 936  NSMGRPGGDYNT----SLPRPALGGSIPTLPLRSNSIPGARPVLQ--QQQQMLQMRPGEI 989

Query: 538  SRSFINNPHP----------------AMEPRQGNT--KPLFHFNSDQANQQMPSVLPSQN 579
                  NP+                 +ME     T  +PL   + D      PS L  Q+
Sbjct: 990  PMGMGANPYGQAAASNQLGSWPDGMLSMEQVSHGTQNRPLLRNSLDDLVGP-PSNLEGQS 1048

Query: 580  KP--------SLLHYTQQQQQQQQQQQQ--QQQQQQQQQQQQQQQQQQQQQQSSISAQQQ 629
                      +LL  T     ++  +     +   Q Q  + +Q   Q Q+ + +  Q+ 
Sbjct: 1049 DERALLDQLHTLLSNTDATGLEEIDRALGIPELVNQGQALEPKQDAFQGQEAAVMMDQKA 1108

Query: 630  QQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQK 689
                 +  AQ    Q     Q Q         Q  Q  + P Q +  +  +  P     K
Sbjct: 1109 GLYGQTYPAQGPPMQGGFHLQGQSPSFNSMMNQMNQQGNFPLQGMHPRANIMRPRTNTPK 1168

Query: 690  LLLQQMQNQPIAGMGYQVSQQQRQD-QHSVVGQNTGPSPSPNPCSNPNTGS--GYMNSQ- 745
             L  Q+Q +     G Q   Q RQ  +  +     G +    P   P   S  G++N+Q 
Sbjct: 1169 QLRMQLQQRL---QGQQFLNQSRQALELKMENPTAGGAAVMRPMMQPQVSSQQGFLNAQM 1225

Query: 746  -----QSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPD 800
                 + LL+     ++  +  Q  +Q+QQ   QQQ     ++   Q Q       PPP+
Sbjct: 1226 VAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQAFSPPPN 1285



 Score = 34.7 bits (78), Expect = 0.54
 Identities = 48/214 (22%), Positives = 75/214 (35%), Gaps = 46/214 (21%)

Query: 336  QDDPFNIDLGQQSQRST-------PRPSLPMEKIVIKSEYSPGLTQGPSGSPQLRPPSAG 388
            Q   FN  + Q +Q+         PR ++   +     +    L Q   G   L      
Sbjct: 1131 QSPSFNSMMNQMNQQGNFPLQGMHPRANIMRPRTNTPKQLRMQLQQRLQGQQFLNQSRQA 1190

Query: 389  PAFSMANSALSTSSPIPSVPQSQAQPQTG--SGASRALPSWQEVSHAQQLKQIAANRQQH 446
                M N     ++ +  + Q Q   Q G  +    A  S + +SH  + +++A   QQ 
Sbjct: 1191 LELKMENPTAGGAAVMRPMMQPQVSSQQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQQ 1250

Query: 447  ARMQQHQQQHQ---------------------PTNWSALPSSAGPSPGP----------- 474
             + QQ QQQ Q                     P N +A PS  G   GP           
Sbjct: 1251 QQQQQQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLLAGPTMPQAPPQQFP 1310

Query: 475  ----FGQEKIPSPSFGQQTFSPQSSPMPGVAGGS 504
                +G  + P P+FG+ + SP ++ M    G S
Sbjct: 1311 YQPNYGMGQQPDPAFGRVS-SPPNAMMSSRMGPS 1343


>gi|119943102 CREB binding protein isoform b [Homo sapiens]
          Length = 2404

 Score = 87.4 bits (215), Expect = 7e-17
 Identities = 139/535 (25%), Positives = 193/535 (36%), Gaps = 134/535 (25%)

Query: 349  QRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVP 408
            Q+S P P+        +   +P   Q P+  PQ  P S  PA      +++ + P  +V 
Sbjct: 1841 QQSLPSPTSAPPGTPTQQPSTPQTPQPPA-QPQPSPVSMSPA---GFPSVARTQPPTTVS 1896

Query: 409  QSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSA 468
              +   Q  +    A P    V  A+Q+++ A  +Q   R+  +            P S 
Sbjct: 1897 TGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQ 1956

Query: 469  G-------PSPGPFGQEKIPS--PSFGQQTFSPQSSPMPG-------------VAGG--- 503
                    P P       +PS  P   QQ   PQ  PMPG             VAG    
Sbjct: 1957 MAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPRPVISMQAQAAVAGPRMP 2016

Query: 504  ----------SGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFI---------NN 544
                      S    ++      + P  Q   L++L +  PQ L  +FI         N 
Sbjct: 2017 SVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNIL-KSNPQ-LMAAFIKQRTAKYVANQ 2074

Query: 545  P----------HPAMEPRQG--NTKPLFHFNSDQANQQMPSVLPSQ-------------- 578
            P           P M+P+ G      L + N+ QA    P V P Q              
Sbjct: 2075 PGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGLNPQGQALN 2134

Query: 579  -----NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---------------Q 618
                 + P++     Q ++  ++Q  QQQQQQQQQQQQQQQQQQ               Q
Sbjct: 2135 IMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQ 2194

Query: 619  QQQS------SISAQQQQQQ----QSSISAQQQQQQQQ-----------------QQQQQ 651
            Q Q       ++  QQ+ QQ    Q S   Q   Q  Q                 QQ  Q
Sbjct: 2195 QPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQ 2254

Query: 652  QQQQQQQQQQQQQQPSSQPAQSLPSQPLLR-----SPLPLQQKLLLQQMQNQPIAGMGYQ 706
            Q+  QQQQ +QQ     QP    P Q +L      S LP QQ  +   + NQ  +    Q
Sbjct: 2255 QRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQ--IATSLSNQVRSPAPVQ 2312

Query: 707  VSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGS---GYMNSQQSLLNQQLMGKKQ 758
              + Q Q  HS       P PSP+  S P TGS   G   +  S ++Q  +G  +
Sbjct: 2313 SPRPQSQPPHSSPSPRIQPQPSPHHVS-PQTGSPHPGLAVTMASSIDQGHLGNPE 2366



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 81/361 (22%), Positives = 115/361 (31%), Gaps = 53/361 (14%)

Query: 370  PGLTQGPSGSPQLRPPSAGPAFSMAN-SALSTSSPIPSVPQSQAQPQTGSGASRALPSWQ 428
            PGL   P   PQ   P      S+ N +A+    P P VP  Q Q   G        +  
Sbjct: 2081 PGLQSQPGMQPQ---PGMHQQPSLQNLNAMQAGVPRPGVPPQQ-QAMGGLNPQGQALNIM 2136

Query: 429  EVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQ 488
               H   +  +    ++  R Q  QQQ Q                             QQ
Sbjct: 2137 NPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQ-------------------------QQ 2171

Query: 489  TFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPA 548
                Q     G+AGG      MA +     P   GG+   + QQ+               
Sbjct: 2172 QQQQQQQGSAGMAGG------MAGHGQFQQPQGPGGYPPAMQQQQRMQQHL--------- 2216

Query: 549  MEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQ 608
              P QG++         Q  Q     L + + P++     QQ+  QQQQ +QQ     Q 
Sbjct: 2217 --PLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNI-QQALQQRILQQQQMKQQIGSPGQP 2273

Query: 609  QQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSS 668
                 QQ     Q   S    QQ  +S+S Q +     Q  + Q Q        + QP  
Sbjct: 2274 NPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQP 2333

Query: 669  QPAQSLPSQPLLRSPLPLQQKLLLQQ--MQNQPIAGMGYQVSQQQR---QDQHSVVGQNT 723
             P    P        L +     + Q  + N   + M  Q++   R     + S+VG  T
Sbjct: 2334 SPHHVSPQTGSPHPGLAVTMASSIDQGHLGNPEQSAMLPQLNTPSRSALSSELSLVGDTT 2393

Query: 724  G 724
            G
Sbjct: 2394 G 2394



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 109/517 (21%), Positives = 160/517 (30%), Gaps = 79/517 (15%)

Query: 86   ARKAGKHTKATATAATTTAPPPPPAAPPAASQAAATAAPPPPPDYHHHHQQHLLNSSNNG 145
            AR     T +T    +    PPPPA PP A+  AA           H ++ ++ NS   G
Sbjct: 1887 ARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPG 1946

Query: 146  GSG-GINGEQQPPASTPGDQRNSALIALQGSLKRKQVVNLSPANSKRPNGFVDNSFLDI- 203
             +G G  G Q  P S    + N     +  S+   Q    +P   ++P   +    + + 
Sbjct: 1947 RTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQ-WQQAPLPQQQPMPGLPRPVISMQ 2005

Query: 204  -KRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQAPLRK---TNTLPSHTHSPGNGLFN 259
             +    G  + + Q    I+    Q +  TL    +P ++    N L S+       +  
Sbjct: 2006 AQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQ 2065

Query: 260  MGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVP 319
               K V  +PG      +   G  +Q  + P      PG     P LQ L          
Sbjct: 2066 RTAKYVANQPG-----MQPQPGLQSQPGMQP-----QPGMH-QQPSLQNL---------- 2104

Query: 320  PMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIVIKSEYSPGLT---QGP 376
                                         Q   PRP +P ++  +      G       P
Sbjct: 2105 --------------------------NAMQAGVPRPGVPPQQQAMGGLNPQGQALNIMNP 2138

Query: 377  SGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQ-Q 435
              +P +   +      +    L          Q Q Q Q GS       +     H Q Q
Sbjct: 2139 GHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGM----AGGMAGHGQFQ 2194

Query: 436  LKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGP--------SPGPFGQEKIPSPSFGQ 487
              Q         + QQ  QQH P   S++   A           PG  G +  P+     
Sbjct: 2195 QPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPG-LGADSTPNIQQAL 2253

Query: 488  QTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHP 547
            Q    Q   M    G  GQ   M+   +      Q  HL    QQ    LS   + +P P
Sbjct: 2254 QQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLP--GQQIATSLSNQ-VRSPAP 2310

Query: 548  AMEPRQGNTKPLFHFNSDQANQQMPS---VLPSQNKP 581
               PR  +  P  H +     Q  PS   V P    P
Sbjct: 2311 VQSPRPQSQPP--HSSPSPRIQPQPSPHHVSPQTGSP 2345



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 113/488 (23%), Positives = 161/488 (32%), Gaps = 66/488 (13%)

Query: 604  QQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQ 663
            +QQQ Q + QQ Q  +++ +    +   QQS  S          QQ    Q  Q   Q Q
Sbjct: 1813 RQQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQ 1872

Query: 664  QQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQM-------QNQPIAGMGYQVSQQQRQDQH 716
              P S      PS    + P  +       Q+       Q  P A    +  +++ Q Q 
Sbjct: 1873 PSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQ 1932

Query: 717  SVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQ 776
             +   N   S  P       TG G   SQ + ++  +    Q +   +M        QQ 
Sbjct: 1933 HLYRVNINNSMPPG-----RTGMGTPGSQMAPVSLNVPRPNQ-VSGPVMPSMPPGQWQQA 1986

Query: 777  MLADAEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-NQALANP 835
             L       PQ Q    L RP    + Q    G   P+ Q     S  +L    + L +P
Sbjct: 1987 PL-------PQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSP 2039

Query: 836  VSTH------TILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQ 889
             S         IL  N  L++     R     TA       G  P  QP   S      Q
Sbjct: 2040 SSPQQQQQVLNILKSNPQLMAAFIKQR-----TAKYVANQPGMQP--QPGLQSQPGMQPQ 2092

Query: 890  LTQQRNPKQLLANQNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQQ-LRPNLTHSMASMP 948
                + P     N     +PR P + P      A  G    G +   + P    +MASM 
Sbjct: 2093 PGMHQQPSLQNLNAMQAGVPR-PGVPPQQQ---AMGGLNPQGQALNIMNPGHNPNMASMN 2148

Query: 949  PQRTSNVMITSNTTAPNWASQEGTSKQQEALTSAGV-------------RFPTGTPAAYT 995
            PQ    ++            Q+   +QQ+   SAG+             + P G P A  
Sbjct: 2149 PQ-YREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQ 2207

Query: 996  PNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRPMNQMSQTLNGQTMGP-----LRGLNLR 1050
              Q +QQ +  Q  S   +        A QM  + QM Q   G    P     L+   L+
Sbjct: 2208 QQQRMQQHLPLQGSSMGQM--------AAQMGQLGQMGQPGLGADSTPNIQQALQQRILQ 2259

Query: 1051 PNQLSTQI 1058
              Q+  QI
Sbjct: 2260 QQQMKQQI 2267



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 120/550 (21%), Positives = 185/550 (33%), Gaps = 73/550 (13%)

Query: 588  QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQ 647
            QQQ Q + QQ Q  +++      +   QQ     +S       QQ S+    Q   Q Q 
Sbjct: 1814 QQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQP 1873

Query: 648  QQQQQQQQQQQQQQQQQQPSS----QPAQSLPSQPLLRSPLPLQ----QKLLLQQMQNQP 699
                          + Q P++    +P   +P+ P    P P      +++  +  Q Q 
Sbjct: 1874 SPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQH 1933

Query: 700  IAGMGYQVSQQQRQDQHSVVGQNTGPS----PSPNPCSNPNTGSGYMNS-QQSLLNQQLM 754
            +  +    S    +      G    P     P PN  S P   S      QQ+ L QQ  
Sbjct: 1934 LYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQ- 1992

Query: 755  GKKQTLQRQIMEQKQQLLLQQQMLADAE---KIAP---QDQINRHLSRPPPDYKDQRRNV 808
                 L R ++  + Q  +    +   +    I+P   QD +    S   P  + Q  N+
Sbjct: 1993 -PMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNI 2051

Query: 809  GNMQP----------TAQY----SGGSSTISLNSNQALANPVSTHTILTPN-SSLLSTSH 853
                P          TA+Y     G      L S   +      H    P+  +L +   
Sbjct: 2052 LKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQ--QPSLQNLNAMQA 2109

Query: 854  GTRMPSLSTAVQNMGMYG------NL--PCNQPNTYSVTSGMNQLTQQRNPKQLLANQNN 905
            G   P +    Q MG         N+  P + PN  S    MN   ++   +QLL  Q  
Sbjct: 2110 GVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMAS----MNPQYREMLRRQLLQQQQQ 2165

Query: 906  PMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPN 965
                +         +     G    G  QQ +    +  A    QR    +    ++   
Sbjct: 2166 QQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQ 2225

Query: 966  WASQEGTSKQQEALTSAGVRFPTGTPAAYTPN--QSLQQAVGSQQFSQRAVAPPNQLTPA 1023
             A+Q G           G     G  A  TPN  Q+LQQ +  QQ  ++ +  P      
Sbjct: 2226 MAAQMG---------QLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPG----- 2271

Query: 1024 VQMRPMNQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPPSLT 1083
             Q  PM+     L+GQ     +  +L   Q++T  L N  +S   + QS    +QPP  +
Sbjct: 2272 -QPNPMSPQQHMLSGQP----QASHLPGQQIATS-LSNQVRSPAPV-QSPRPQSQPPHSS 2324

Query: 1084 PSNFPSPNQS 1093
            PS    P  S
Sbjct: 2325 PSPRIQPQPS 2334



 Score = 37.4 bits (85), Expect = 0.083
 Identities = 74/381 (19%), Positives = 115/381 (30%), Gaps = 44/381 (11%)

Query: 405  PSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSAL 464
            P +PQ+Q         S  +   Q          ++    Q  +     +   P N S  
Sbjct: 655  PVIPQAQPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQ 714

Query: 465  PSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAG------ 518
             +S G  PG                 SP   P P    G+  + +MA    ++       
Sbjct: 715  MNSMGSVPG--------------MAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQ 760

Query: 519  -PSAQGGHLDVLMQQKPQDLSRS-------FINNPHPAMEPRQGNTKPLFHFNSDQANQQ 570
             PS+ G  + V M Q P     S        + NP   + P Q +  P         +  
Sbjct: 761  FPSSSGA-MSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGP-QASQLPCPPVTQSPLHPT 818

Query: 571  MPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQ 630
             P    +   PSL H T       Q     Q         Q          S+   Q   
Sbjct: 819  PPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTP 878

Query: 631  QQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKL 690
              Q++  AQ   Q Q   Q       Q  QQQ     +QP    P  PL ++   +  ++
Sbjct: 879  TVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQP----PGTPLSQAAASIDNRV 934

Query: 691  LLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLN 750
                    P +    + + QQ      V+   T         + P+ G      +  ++ 
Sbjct: 935  ------PTPSSVASAETNSQQPGPDVPVLEMKTETQAED---TEPDPGESKGEPRSEMME 985

Query: 751  QQLMGKKQTLQR-QIMEQKQQ 770
            + L G  Q  +   I EQK +
Sbjct: 986  EDLQGASQVKEETDIAEQKSE 1006



 Score = 34.3 bits (77), Expect = 0.70
 Identities = 34/150 (22%), Positives = 57/150 (38%), Gaps = 6/150 (4%)

Query: 895  NPKQLLANQNNPMMPRPPTLGPSNNNNV-ATFGAGSVGNSQQLRPNLTHSMASMPPQRTS 953
            NP  +L  Q + +   P T  P +     A+  AG         P +T    + P Q ++
Sbjct: 793  NPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPST 852

Query: 954  NVMITSNTTAPNWASQEGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRA 1013
             V  +  T  P   S    ++ Q   T         TP   TP Q    +V + Q SQ+ 
Sbjct: 853  PVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQ--PPSVATPQSSQQQ 910

Query: 1014 VAPPNQLTPAVQMRPMNQMSQTLNGQTMGP 1043
              P +   P     P++Q + +++ +   P
Sbjct: 911  PTPVHAQPPGT---PLSQAAASIDNRVPTP 937


>gi|119943104 CREB binding protein isoform a [Homo sapiens]
          Length = 2442

 Score = 87.4 bits (215), Expect = 7e-17
 Identities = 139/535 (25%), Positives = 193/535 (36%), Gaps = 134/535 (25%)

Query: 349  QRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVP 408
            Q+S P P+        +   +P   Q P+  PQ  P S  PA      +++ + P  +V 
Sbjct: 1879 QQSLPSPTSAPPGTPTQQPSTPQTPQPPA-QPQPSPVSMSPA---GFPSVARTQPPTTVS 1934

Query: 409  QSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSA 468
              +   Q  +    A P    V  A+Q+++ A  +Q   R+  +            P S 
Sbjct: 1935 TGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQ 1994

Query: 469  G-------PSPGPFGQEKIPS--PSFGQQTFSPQSSPMPG-------------VAGG--- 503
                    P P       +PS  P   QQ   PQ  PMPG             VAG    
Sbjct: 1995 MAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPRPVISMQAQAAVAGPRMP 2054

Query: 504  ----------SGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFI---------NN 544
                      S    ++      + P  Q   L++L +  PQ L  +FI         N 
Sbjct: 2055 SVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNIL-KSNPQ-LMAAFIKQRTAKYVANQ 2112

Query: 545  P----------HPAMEPRQG--NTKPLFHFNSDQANQQMPSVLPSQ-------------- 578
            P           P M+P+ G      L + N+ QA    P V P Q              
Sbjct: 2113 PGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGLNPQGQALN 2172

Query: 579  -----NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---------------Q 618
                 + P++     Q ++  ++Q  QQQQQQQQQQQQQQQQQQ               Q
Sbjct: 2173 IMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQ 2232

Query: 619  QQQS------SISAQQQQQQ----QSSISAQQQQQQQQ-----------------QQQQQ 651
            Q Q       ++  QQ+ QQ    Q S   Q   Q  Q                 QQ  Q
Sbjct: 2233 QPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQ 2292

Query: 652  QQQQQQQQQQQQQQPSSQPAQSLPSQPLLR-----SPLPLQQKLLLQQMQNQPIAGMGYQ 706
            Q+  QQQQ +QQ     QP    P Q +L      S LP QQ  +   + NQ  +    Q
Sbjct: 2293 QRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQ--IATSLSNQVRSPAPVQ 2350

Query: 707  VSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGS---GYMNSQQSLLNQQLMGKKQ 758
              + Q Q  HS       P PSP+  S P TGS   G   +  S ++Q  +G  +
Sbjct: 2351 SPRPQSQPPHSSPSPRIQPQPSPHHVS-PQTGSPHPGLAVTMASSIDQGHLGNPE 2404



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 81/361 (22%), Positives = 115/361 (31%), Gaps = 53/361 (14%)

Query: 370  PGLTQGPSGSPQLRPPSAGPAFSMAN-SALSTSSPIPSVPQSQAQPQTGSGASRALPSWQ 428
            PGL   P   PQ   P      S+ N +A+    P P VP  Q Q   G        +  
Sbjct: 2119 PGLQSQPGMQPQ---PGMHQQPSLQNLNAMQAGVPRPGVPPQQ-QAMGGLNPQGQALNIM 2174

Query: 429  EVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQ 488
               H   +  +    ++  R Q  QQQ Q                             QQ
Sbjct: 2175 NPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQ-------------------------QQ 2209

Query: 489  TFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPA 548
                Q     G+AGG      MA +     P   GG+   + QQ+               
Sbjct: 2210 QQQQQQQGSAGMAGG------MAGHGQFQQPQGPGGYPPAMQQQQRMQQHL--------- 2254

Query: 549  MEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQ 608
              P QG++         Q  Q     L + + P++     QQ+  QQQQ +QQ     Q 
Sbjct: 2255 --PLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNI-QQALQQRILQQQQMKQQIGSPGQP 2311

Query: 609  QQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSS 668
                 QQ     Q   S    QQ  +S+S Q +     Q  + Q Q        + QP  
Sbjct: 2312 NPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQP 2371

Query: 669  QPAQSLPSQPLLRSPLPLQQKLLLQQ--MQNQPIAGMGYQVSQQQR---QDQHSVVGQNT 723
             P    P        L +     + Q  + N   + M  Q++   R     + S+VG  T
Sbjct: 2372 SPHHVSPQTGSPHPGLAVTMASSIDQGHLGNPEQSAMLPQLNTPSRSALSSELSLVGDTT 2431

Query: 724  G 724
            G
Sbjct: 2432 G 2432



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 109/517 (21%), Positives = 160/517 (30%), Gaps = 79/517 (15%)

Query: 86   ARKAGKHTKATATAATTTAPPPPPAAPPAASQAAATAAPPPPPDYHHHHQQHLLNSSNNG 145
            AR     T +T    +    PPPPA PP A+  AA           H ++ ++ NS   G
Sbjct: 1925 ARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPG 1984

Query: 146  GSG-GINGEQQPPASTPGDQRNSALIALQGSLKRKQVVNLSPANSKRPNGFVDNSFLDI- 203
             +G G  G Q  P S    + N     +  S+   Q    +P   ++P   +    + + 
Sbjct: 1985 RTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQ-WQQAPLPQQQPMPGLPRPVISMQ 2043

Query: 204  -KRIRVGENLSAGQGGLQINNGQSQIMSGTLPMSQAPLRK---TNTLPSHTHSPGNGLFN 259
             +    G  + + Q    I+    Q +  TL    +P ++    N L S+       +  
Sbjct: 2044 AQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQ 2103

Query: 260  MGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVP 319
               K V  +PG      +   G  +Q  + P      PG     P LQ L          
Sbjct: 2104 RTAKYVANQPG-----MQPQPGLQSQPGMQP-----QPGMH-QQPSLQNL---------- 2142

Query: 320  PMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIVIKSEYSPGLT---QGP 376
                                         Q   PRP +P ++  +      G       P
Sbjct: 2143 --------------------------NAMQAGVPRPGVPPQQQAMGGLNPQGQALNIMNP 2176

Query: 377  SGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQ-Q 435
              +P +   +      +    L          Q Q Q Q GS       +     H Q Q
Sbjct: 2177 GHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGM----AGGMAGHGQFQ 2232

Query: 436  LKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGP--------SPGPFGQEKIPSPSFGQ 487
              Q         + QQ  QQH P   S++   A           PG  G +  P+     
Sbjct: 2233 QPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPG-LGADSTPNIQQAL 2291

Query: 488  QTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHP 547
            Q    Q   M    G  GQ   M+   +      Q  HL    QQ    LS   + +P P
Sbjct: 2292 QQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLP--GQQIATSLSNQ-VRSPAP 2348

Query: 548  AMEPRQGNTKPLFHFNSDQANQQMPS---VLPSQNKP 581
               PR  +  P  H +     Q  PS   V P    P
Sbjct: 2349 VQSPRPQSQPP--HSSPSPRIQPQPSPHHVSPQTGSP 2383



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 113/488 (23%), Positives = 161/488 (32%), Gaps = 66/488 (13%)

Query: 604  QQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQ 663
            +QQQ Q + QQ Q  +++ +    +   QQS  S          QQ    Q  Q   Q Q
Sbjct: 1851 RQQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQ 1910

Query: 664  QQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQM-------QNQPIAGMGYQVSQQQRQDQH 716
              P S      PS    + P  +       Q+       Q  P A    +  +++ Q Q 
Sbjct: 1911 PSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQ 1970

Query: 717  SVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQ 776
             +   N   S  P       TG G   SQ + ++  +    Q +   +M        QQ 
Sbjct: 1971 HLYRVNINNSMPPG-----RTGMGTPGSQMAPVSLNVPRPNQ-VSGPVMPSMPPGQWQQA 2024

Query: 777  MLADAEKIAPQDQINRHLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-NQALANP 835
             L       PQ Q    L RP    + Q    G   P+ Q     S  +L    + L +P
Sbjct: 2025 PL-------PQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSP 2077

Query: 836  VSTH------TILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQ 889
             S         IL  N  L++     R     TA       G  P  QP   S      Q
Sbjct: 2078 SSPQQQQQVLNILKSNPQLMAAFIKQR-----TAKYVANQPGMQP--QPGLQSQPGMQPQ 2130

Query: 890  LTQQRNPKQLLANQNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQQ-LRPNLTHSMASMP 948
                + P     N     +PR P + P      A  G    G +   + P    +MASM 
Sbjct: 2131 PGMHQQPSLQNLNAMQAGVPR-PGVPPQQQ---AMGGLNPQGQALNIMNPGHNPNMASMN 2186

Query: 949  PQRTSNVMITSNTTAPNWASQEGTSKQQEALTSAGV-------------RFPTGTPAAYT 995
            PQ    ++            Q+   +QQ+   SAG+             + P G P A  
Sbjct: 2187 PQ-YREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQ 2245

Query: 996  PNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRPMNQMSQTLNGQTMGP-----LRGLNLR 1050
              Q +QQ +  Q  S   +        A QM  + QM Q   G    P     L+   L+
Sbjct: 2246 QQQRMQQHLPLQGSSMGQM--------AAQMGQLGQMGQPGLGADSTPNIQQALQQRILQ 2297

Query: 1051 PNQLSTQI 1058
              Q+  QI
Sbjct: 2298 QQQMKQQI 2305



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 120/550 (21%), Positives = 185/550 (33%), Gaps = 73/550 (13%)

Query: 588  QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQ 647
            QQQ Q + QQ Q  +++      +   QQ     +S       QQ S+    Q   Q Q 
Sbjct: 1852 QQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQP 1911

Query: 648  QQQQQQQQQQQQQQQQQQPSS----QPAQSLPSQPLLRSPLPLQ----QKLLLQQMQNQP 699
                          + Q P++    +P   +P+ P    P P      +++  +  Q Q 
Sbjct: 1912 SPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQH 1971

Query: 700  IAGMGYQVSQQQRQDQHSVVGQNTGPS----PSPNPCSNPNTGSGYMNS-QQSLLNQQLM 754
            +  +    S    +      G    P     P PN  S P   S      QQ+ L QQ  
Sbjct: 1972 LYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQ- 2030

Query: 755  GKKQTLQRQIMEQKQQLLLQQQMLADAE---KIAP---QDQINRHLSRPPPDYKDQRRNV 808
                 L R ++  + Q  +    +   +    I+P   QD +    S   P  + Q  N+
Sbjct: 2031 -PMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNI 2089

Query: 809  GNMQP----------TAQY----SGGSSTISLNSNQALANPVSTHTILTPN-SSLLSTSH 853
                P          TA+Y     G      L S   +      H    P+  +L +   
Sbjct: 2090 LKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQ--QPSLQNLNAMQA 2147

Query: 854  GTRMPSLSTAVQNMGMYG------NL--PCNQPNTYSVTSGMNQLTQQRNPKQLLANQNN 905
            G   P +    Q MG         N+  P + PN  S    MN   ++   +QLL  Q  
Sbjct: 2148 GVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMAS----MNPQYREMLRRQLLQQQQQ 2203

Query: 906  PMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPN 965
                +         +     G    G  QQ +    +  A    QR    +    ++   
Sbjct: 2204 QQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQ 2263

Query: 966  WASQEGTSKQQEALTSAGVRFPTGTPAAYTPN--QSLQQAVGSQQFSQRAVAPPNQLTPA 1023
             A+Q G           G     G  A  TPN  Q+LQQ +  QQ  ++ +  P      
Sbjct: 2264 MAAQMG---------QLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPG----- 2309

Query: 1024 VQMRPMNQMSQTLNGQTMGPLRGLNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPPSLT 1083
             Q  PM+     L+GQ     +  +L   Q++T  L N  +S   + QS    +QPP  +
Sbjct: 2310 -QPNPMSPQQHMLSGQP----QASHLPGQQIATS-LSNQVRSPAPV-QSPRPQSQPPHSS 2362

Query: 1084 PSNFPSPNQS 1093
            PS    P  S
Sbjct: 2363 PSPRIQPQPS 2372



 Score = 37.4 bits (85), Expect = 0.083
 Identities = 74/381 (19%), Positives = 115/381 (30%), Gaps = 44/381 (11%)

Query: 405  PSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSAL 464
            P +PQ+Q         S  +   Q          ++    Q  +     +   P N S  
Sbjct: 693  PVIPQAQPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQ 752

Query: 465  PSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAG------ 518
             +S G  PG                 SP   P P    G+  + +MA    ++       
Sbjct: 753  MNSMGSVPG--------------MAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQ 798

Query: 519  -PSAQGGHLDVLMQQKPQDLSRS-------FINNPHPAMEPRQGNTKPLFHFNSDQANQQ 570
             PS+ G  + V M Q P     S        + NP   + P Q +  P         +  
Sbjct: 799  FPSSSGA-MSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGP-QASQLPCPPVTQSPLHPT 856

Query: 571  MPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQ 630
             P    +   PSL H T       Q     Q         Q          S+   Q   
Sbjct: 857  PPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTP 916

Query: 631  QQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKL 690
              Q++  AQ   Q Q   Q       Q  QQQ     +QP    P  PL ++   +  ++
Sbjct: 917  TVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQP----PGTPLSQAAASIDNRV 972

Query: 691  LLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLN 750
                    P +    + + QQ      V+   T         + P+ G      +  ++ 
Sbjct: 973  ------PTPSSVASAETNSQQPGPDVPVLEMKTETQAED---TEPDPGESKGEPRSEMME 1023

Query: 751  QQLMGKKQTLQR-QIMEQKQQ 770
            + L G  Q  +   I EQK +
Sbjct: 1024 EDLQGASQVKEETDIAEQKSE 1044



 Score = 34.3 bits (77), Expect = 0.70
 Identities = 34/150 (22%), Positives = 57/150 (38%), Gaps = 6/150 (4%)

Query: 895  NPKQLLANQNNPMMPRPPTLGPSNNNNV-ATFGAGSVGNSQQLRPNLTHSMASMPPQRTS 953
            NP  +L  Q + +   P T  P +     A+  AG         P +T    + P Q ++
Sbjct: 831  NPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPST 890

Query: 954  NVMITSNTTAPNWASQEGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRA 1013
             V  +  T  P   S    ++ Q   T         TP   TP Q    +V + Q SQ+ 
Sbjct: 891  PVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQ--PPSVATPQSSQQQ 948

Query: 1014 VAPPNQLTPAVQMRPMNQMSQTLNGQTMGP 1043
              P +   P     P++Q + +++ +   P
Sbjct: 949  PTPVHAQPPGT---PLSQAAASIDNRVPTP 975


>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
          Length = 961

 Score = 87.0 bits (214), Expect = 9e-17
 Identities = 92/276 (33%), Positives = 118/276 (42%), Gaps = 47/276 (17%)

Query: 517 AGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLP 576
           AG S Q G L  + Q KPQ       + P P  + +Q    P          QQ PS   
Sbjct: 403 AGSSNQPGLLASVPQPKPQAPP----SQPLPQTQAKQPQAPP--------TPQQTPST-Q 449

Query: 577 SQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQ------QQQQQQQQQQSSISAQQQQ 630
           +Q  P+    T Q QQQ   +QQQQQQQ    QQQ      QQQQ Q QQ  ++    QQ
Sbjct: 450 AQGLPAQAQATPQHQQQLFLKQQQQQQQPPPAQQQPAGTFYQQQQAQTQQFQAVHPATQQ 509

Query: 631 Q---QQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQ 687
               Q   +S    QQQ  Q   QQQQQQQQQQQQQQ      A +L  Q L+     LQ
Sbjct: 510 PAIAQFPVVSQGGSQQQLMQNFYQQQQQQQQQQQQQQL-----ATALHQQQLMTQQAALQ 564

Query: 688 QKLLL---QQMQNQPIAGMGYQVSQQ-------------QRQDQHSVVGQNTGPSPSPNP 731
           QK  +   QQ Q QP A      +Q+             Q     +V GQ  G   S  P
Sbjct: 565 QKPTMAAGQQPQPQPAAAPQPAPAQEPAIQAPVRQQPKVQTTPPPAVQGQKVG---SLTP 621

Query: 732 CSNPNT-GSGYMNSQQSLLNQQLMGKKQTLQRQIME 766
            S+P T  +G+      + +  + G   +   Q+++
Sbjct: 622 PSSPKTQRAGHRRILSDVTHSAVFGVPASKSTQLLQ 657



 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 97/359 (27%), Positives = 135/359 (37%), Gaps = 59/359 (16%)

Query: 534 PQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQ 593
           P+   ++    P+P + P Q    P          Q  P    S N+P LL    Q + Q
Sbjct: 366 PRQRPKAGQTQPNPGILPIQPALTP----RKRATVQPPPQAAGSSNQPGLLASVPQPKPQ 421

Query: 594 QQQQQQQQQQQQQQQQ-----QQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQ 648
               Q   Q Q +Q Q     QQ    Q Q   +   A  Q QQQ  +     +QQQQQQ
Sbjct: 422 APPSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQLFL-----KQQQQQQ 476

Query: 649 QQQQQQQ-------QQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIA 701
           Q    QQ       QQQQ Q QQ  +  PA   P+  + + P+  Q     Q MQN    
Sbjct: 477 QPPPAQQQPAGTFYQQQQAQTQQFQAVHPATQQPA--IAQFPVVSQGGSQQQLMQN---- 530

Query: 702 GMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQ 761
              YQ  QQQ+Q Q     Q    +               ++ QQ +  Q  + +K T+ 
Sbjct: 531 --FYQQQQQQQQQQQQ---QQLATA---------------LHQQQLMTQQAALQQKPTMA 570

Query: 762 RQIMEQKQQLLLQQQMLADAEKI-APQDQINRHLSRPPPDYKDQRRNVGNM----QPTAQ 816
                Q Q     Q   A    I AP  Q  +  + PPP  + Q+  VG++     P  Q
Sbjct: 571 AGQQPQPQPAAAPQPAPAQEPAIQAPVRQQPKVQTTPPPAVQGQK--VGSLTPPSSPKTQ 628

Query: 817 YSGGSSTISLNSNQALAN-PVSTHTIL----TPNSSLLSTSHGTRMPSLSTAVQNMGMY 870
            +G    +S  ++ A+   P S  T L       +SL  +   T  PS S       +Y
Sbjct: 629 RAGHRRILSDVTHSAVFGVPASKSTQLLQAAAAEASLNKSKSATTTPSGSPRTSQQNVY 687



 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 88/389 (22%), Positives = 131/389 (33%), Gaps = 94/389 (24%)

Query: 370 PGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQE 429
           P LT     + Q  PP A  + +      S   P P  P SQ  PQT +   +A P+ Q+
Sbjct: 386 PALTPRKRATVQ-PPPQAAGSSNQPGLLASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQ 444

Query: 430 V--SHAQQL---KQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPS 484
              + AQ L    Q     QQ   ++Q QQQ QP      P+   P+   + Q++  +  
Sbjct: 445 TPSTQAQGLPAQAQATPQHQQQLFLKQQQQQQQPP-----PAQQQPAGTFYQQQQAQTQQ 499

Query: 485 F---GQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSF 541
           F      T  P  +  P V+ G  Q ++M N+                 QQ+ Q      
Sbjct: 500 FQAVHPATQQPAIAQFPVVSQGGSQQQLMQNF---------------YQQQQQQ------ 538

Query: 542 INNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQ 601
                                   Q  QQ+ + L                    QQQ   
Sbjct: 539 ---------------------QQQQQQQQLATAL-------------------HQQQLMT 558

Query: 602 QQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQ 661
           QQ   QQ+      QQ Q Q + + Q    Q+ +I A   +QQ + Q       Q Q+  
Sbjct: 559 QQAALQQKPTMAAGQQPQPQPAAAPQPAPAQEPAIQA-PVRQQPKVQTTPPPAVQGQKVG 617

Query: 662 QQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQ 721
               PSS   Q                + +L  + +  + G+    S Q  Q   +    
Sbjct: 618 SLTPPSSPKTQR------------AGHRRILSDVTHSAVFGVPASKSTQLLQAAAAEASL 665

Query: 722 NTGPSPSPNPCSNPNTGSGYMNSQQSLLN 750
           N   S +  P  +P T      SQQ++ N
Sbjct: 666 NKSKSATTTPSGSPRT------SQQNVYN 688


>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
          Length = 2245

 Score = 86.7 bits (213), Expect = 1e-16
 Identities = 147/658 (22%), Positives = 245/658 (37%), Gaps = 139/658 (21%)

Query: 127  PPDYHHH-HQQHLLNSSNNGGSGGINGEQ--QPPASTPGDQRNSALIALQGSLKRKQVVN 183
            PP +H     Q ++N S       ING Q   P +++ G  R+ ++ ++     R+ V +
Sbjct: 1061 PPQHHSCLPDQEVINGSL------INGRQADSPMSTSSGSSRSFSVASMLPETTREDVTS 1114

Query: 184  LSPANSKRPNGFVDNS---FLDIKRIRVGENLSAGQGGLQIN-------NGQSQIMSGTL 233
             +  N+     FV+ +    L  + I   ENL  G+ GLQ +         ++ ++ G  
Sbjct: 1115 NATTNTCDSCTFVEQTDIVALAARAIFDQENLEKGRVGLQADIREVASKPSEASLLEGDP 1174

Query: 234  PM-SQAPLR----KTNTLPSHTHSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMTQENI 288
            P  SQ P      +    P+  +S G+      ++   + P E  SCS            
Sbjct: 1175 PFKSQIPKESGTGQAEATPNEFNSQGS------IEATMERPLEKPSCSL----------- 1217

Query: 289  FPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFNIDLGQQS 348
                     G +  +  LQ+  ++      P ++ L + N+I+               QS
Sbjct: 1218 ---------GIKTSNASLQDSTSQ-----PPSITSLSVNNLIH---------------QS 1248

Query: 349  QRSTPRPSLP-----MEKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSP 403
              S P  S        E+  + +  +  ++    GS   +PP  GP+     S    ++ 
Sbjct: 1249 SISHPLASCAGLSPTSEQTTVPATVNLTVSSSSYGS---QPP--GPSLMTEYSQEQLNTM 1303

Query: 404  IPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSA 463
              ++P SQ Q      +  +     + +    L   +A RQ+H +               
Sbjct: 1304 TSTIPNSQIQEPLLKPSHESRKDSAKRAVQDDLLLSSAKRQKHCQ--------------- 1348

Query: 464  LPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQG 523
                    P P   E +   S    T S Q+  M         S++  N      P +  
Sbjct: 1349 --------PAPLRLESMSLMSRTPDTISDQTQMMV--------SQIPPNSSNSVVPVSNP 1392

Query: 524  GHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSV---LPSQNK 580
             H D L +  P   S +F+       E + G+   +      QA+Q + ++   +P+Q  
Sbjct: 1393 AHGDGLTRLFPP--SNNFVTPALRQTEVQCGSQPSVAEQQQTQASQHLQALQQHVPAQGV 1450

Query: 581  PSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQ 640
              L       +QQQQQQQQQQQQQQQQQ  Q +++    Q        +    S      
Sbjct: 1451 SHLHSNHLYIKQQQQQQQQQQQQQQQQQAGQLRERHHLYQMQHHVPHAESSVHSQPHNVH 1510

Query: 641  QQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPI 700
            QQ+  QQ+ Q Q+++   Q  Q  Q S QP      Q   ++  P       QQMQ Q  
Sbjct: 1511 QQRTLQQEVQMQKKRNLVQGTQTSQLSLQPKHHGTDQSRSKTGQPHPHH---QQMQQQ-- 1565

Query: 701  AGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQ 758
                              + Q+ G S +   C NP+T   + N  Q+ LNQ +M ++Q
Sbjct: 1566 ------------------MQQHFGSSQTEKSCENPSTSRNHHNHPQNHLNQDIMHQQQ 1605


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 85.1 bits (209), Expect = 3e-16
 Identities = 71/234 (30%), Positives = 99/234 (42%), Gaps = 31/234 (13%)

Query: 585  HYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQ 644
            H+   +QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ  ++   Q  Q Q  + S  Q +  
Sbjct: 2713 HFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAV 2772

Query: 645  QQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAG-- 702
             +   +   + Q+Q+ Q   QP    AQS P QP  +  +   Q    Q  Q   +    
Sbjct: 2773 GKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPR 2832

Query: 703  ----------MGYQVSQQQRQDQHSVVGQNTGPSPSPNPC-----------------SNP 735
                         QV++  R     +  Q    + +P P                  S+P
Sbjct: 2833 PGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSP 2892

Query: 736  NTGSGYMN--SQQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQ 787
               +  MN       + Q      QT+  Q +  +Q L L+QQ +   + I PQ
Sbjct: 2893 GVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQ 2946



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 67/324 (20%), Positives = 117/324 (36%), Gaps = 24/324 (7%)

Query: 531  QQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQ 590
            QQ+ Q   +          + +Q  T         Q   Q P+ + +  K +  H  + Q
Sbjct: 2725 QQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQ 2784

Query: 591  QQQQQQ-------QQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQ 643
            +Q+ Q        Q Q    Q   Q Q Q  Q  QQQ   ++     +  + ++      
Sbjct: 2785 KQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTTVAN 2844

Query: 644  QQQQQQQQQQQQQQQQQQQQQQPSSQPAQ-SLPSQPLLRSPLPLQQKLLLQQMQNQPIAG 702
             Q  +  +    Q Q Q Q Q  + QPAQ +L   P++  P  +     +  +    +AG
Sbjct: 2845 LQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLP-MNVAG 2903

Query: 703  MGYQVSQQQRQDQHSVVGQNT---------GPSPSPNPCSNPNTGSGYMNSQQSLLNQQL 753
            +   + Q Q+    +VV Q             +        P    G    QQ +  QQ+
Sbjct: 2904 ISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQI 2963

Query: 754  MGKKQTLQRQIMEQKQQLLLQQQM---LADAEKIAPQDQINRHLS-RPPPDYKDQRRNVG 809
                   Q+++    Q  L  Q +   ++ A+K+A   Q+   +     P    Q+  V 
Sbjct: 2964 --TTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVA 3021

Query: 810  NMQPTAQYSGGSSTISLNSNQALA 833
            ++Q  A  S  +S  ++   QA A
Sbjct: 3022 SIQQVASASQQASPQTVALTQATA 3045



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 135/631 (21%), Positives = 204/631 (32%), Gaps = 83/631 (13%)

Query: 105  PPPPPAAPPAA---SQAAATAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPASTP 161
            PPPPP  PP      QAA +  P  PP      Q                  Q P  + P
Sbjct: 2513 PPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQP--------VQAPAKAQP 2564

Query: 162  GDQRNSALIALQGSLKRKQVVNLSPANSKRPNGFVDNSFLDIKRIRVGENLSAGQGGLQI 221
                  +   L G++K       S   +  P G V  + +         N  AG      
Sbjct: 2565 AITTGGSAAVLAGTIKT------SVTGTSMPTGAVSGNVI--------VNTIAGVPAATF 2610

Query: 222  NNGQSQIMSG------TLPMSQAPLRKTNTLPSHTHSPGNGLFNMGLKEVKKEPGETLSC 275
             +   ++ S       T P   AP +  +T P              L  +    G     
Sbjct: 2611 QSINKRLASPVAPGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVT 2670

Query: 276  SKHMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIK 335
            S      +T  N+ P +    P   L+ P++    ++ T + +P  +       +    +
Sbjct: 2671 SVTASAVVTT-NLTPVQ---TPARSLV-PQV----SQATGVQLPGKTITPAHFQLLRQQQ 2721

Query: 336  QDDPFNIDLGQQSQRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSP-------QLRPPSAG 388
            Q         QQ Q+   +     ++    S+      QG + SP       +L P    
Sbjct: 2722 QQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHL- 2780

Query: 389  PAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQH-- 446
                M    L    P P  PQ+Q+ P   +   +   S      + QL  + A R     
Sbjct: 2781 --IKMQKQKLQMP-PQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALL 2837

Query: 447  -----ARMQQHQQQHQPTNW---SALPSSAGPSPGPFGQEKIPSPSFGQQTFS-PQSSPM 497
                 A +Q  +    PT+         +  P P      K P  S      S P  + +
Sbjct: 2838 TGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTL 2897

Query: 498  P----GVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQ 553
            P    G++   GQ +  A     A P     H+  L++ K Q + +     P  A  P  
Sbjct: 2898 PMNVAGISVAIGQPQKAAGQTVVAQPV----HMQQLLKLKQQAVQQQKAIQPQAAQGPAA 2953

Query: 554  GNTKPLFHFNSDQANQQMPS-----VLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQ 608
               K      +    QQ  +      L +Q   + +   Q+    QQ Q Q Q  +  Q 
Sbjct: 2954 VQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQV 3013

Query: 609  QQQQQQQQQQQQQSSISAQQQQQQ----QSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQ 664
             QQQ      QQ +S S Q   Q     Q++ + QQ Q         Q  QQ+  QQQ  
Sbjct: 3014 VQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVV 3073

Query: 665  QPSSQPAQS----LPSQPLLRSPLPLQQKLL 691
              +S P Q+     P+Q    S  P QQ  L
Sbjct: 3074 TTASAPLQTPGAPNPAQVPASSDSPSQQPKL 3104



 Score = 40.8 bits (94), Expect = 0.008
 Identities = 103/448 (22%), Positives = 149/448 (33%), Gaps = 100/448 (22%)

Query: 392  SMANSALSTSSPIP-SVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQHARMQ 450
            S+  SA+ T++  P   P     PQ        LP         QL +    +QQ  + Q
Sbjct: 2671 SVTASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQ 2730

Query: 451  QHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVM 510
            Q QQQ                     Q++       QQT +     +P +  G  QS   
Sbjct: 2731 QQQQQ---------------------QQQQQQQQQQQQTTTTSQVQVPQIQ-GQAQSPAQ 2768

Query: 511  ANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQ 570
               + K  P     HL  + +QK Q   +     P P  +             + Q  QQ
Sbjct: 2769 IKAVGKLTPE----HLIKMQKQKLQMPPQP----PPPQAQSAPPQPTAQVQVQTSQPPQQ 2820

Query: 571  MPSVLPSQNKP--------------SLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQ-- 614
                L +   P               +   T+    Q Q Q Q Q Q  Q  Q    +  
Sbjct: 2821 QSPQLTTVTAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPP 2880

Query: 615  -----------------------------QQQQQQQSSISAQQQQQQQSSISAQQQQQQQ 645
                                         Q Q+    ++ AQ    QQ     QQ  QQQ
Sbjct: 2881 VVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQ 2940

Query: 646  QQQQQQQQQ-----QQQQQQQQQQQPSSQPAQSLPSQPLLR-----SPLPLQQKLL-LQQ 694
            +  Q Q  Q     QQ+   QQ   P +Q   +  +QP L+     +P+   QKL   QQ
Sbjct: 2941 KAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQ 3000

Query: 695  MQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQL- 753
            +Q Q       QV QQ  Q   + + Q    S   +P +   T       Q +   QQ+ 
Sbjct: 3001 VQTQIQVAKLPQVVQQ--QTPVASIQQVASASQQASPQTVALT-------QATAAGQQVQ 3051

Query: 754  MGKKQTLQRQIMEQKQQLLLQQQMLADA 781
            M    T   Q+++QK   L+QQQ++  A
Sbjct: 3052 MIPAVTATAQVVQQK---LIQQQVVTTA 3076



 Score = 40.8 bits (94), Expect = 0.008
 Identities = 89/383 (23%), Positives = 139/383 (36%), Gaps = 53/383 (13%)

Query: 409  QSQAQPQTGSGASRALPSWQ-EVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSS 467
            Q Q Q QT + +   +P  Q +     Q+K +     +H    Q Q+   P      P +
Sbjct: 2741 QQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQ-PPPPQA 2799

Query: 468  AGPSPGPFGQEKIPSPSFGQQTFSPQ----SSPMPG-VAGGSGQSKVMANYMYKAGPSAQ 522
                P P  Q ++ +    QQ  SPQ    ++P PG +  G+  + +    + +  P++Q
Sbjct: 2800 QSAPPQPTAQVQVQTSQPPQQQ-SPQLTTVTAPRPGALLTGTTVANLQVARLTRV-PTSQ 2857

Query: 523  GGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPS 582
                  +  Q PQ    +    P  ++     ++  +     + A   +    P +    
Sbjct: 2858 LQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKA--- 2914

Query: 583  LLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQ----------QQQ 632
                  Q    Q    QQ  + +QQ  QQQ+  Q Q  Q   + QQ+           QQ
Sbjct: 2915 ----AGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQ 2970

Query: 633  QSSISAQQQQQQQ---------------QQQQQQQQQQQQQQQQQQQQP--SSQPAQSLP 675
            + + +AQ   + Q               QQ Q Q Q  +  Q  QQQ P  S Q   S  
Sbjct: 2971 KVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASAS 3030

Query: 676  SQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSP-----SPN 730
             Q   ++    Q     QQ+Q  P      QV QQ+   Q  V    T  +P     +PN
Sbjct: 3031 QQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVV---TTASAPLQTPGAPN 3087

Query: 731  PCSNPNTGSGYMNSQQSLLNQQL 753
            P   P   S    SQQ  L  ++
Sbjct: 3088 PAQVP--ASSDSPSQQPKLQMRV 3108



 Score = 34.7 bits (78), Expect = 0.54
 Identities = 23/81 (28%), Positives = 36/81 (44%)

Query: 620  QQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPL 679
            Q +S+ A++  +++ +++ QQ+ QQ    Q    Q Q     QQ  P     Q+  SQP 
Sbjct: 2476 QVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPP 2535

Query: 680  LRSPLPLQQKLLLQQMQNQPI 700
               P    Q     Q Q QP+
Sbjct: 2536 AGPPAVQPQPQPQPQTQPQPV 2556



 Score = 33.9 bits (76), Expect = 0.92
 Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 20/198 (10%)

Query: 903  QNNPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTT 962
            Q  P     P   P+      T G  +   +  ++ ++T +  SMP    S  +I +   
Sbjct: 2546 QPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTIKTSVTGT--SMPTGAVSGNVIVNTIA 2603

Query: 963  APNWASQEGTSKQQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTP 1022
                A+ +  +K+  +        P    A  TP  S    V   Q   RAV  P   TP
Sbjct: 2604 GVPAATFQSINKRLAS--------PVAPGALTTPGGSAPAQVVHTQPPPRAVGSPATATP 2655

Query: 1023 AVQMRPMNQMSQTLNGQTMGPLRGLNLRPNQL-STQILPNLNQSGTGLNQSRTGINQP-P 1080
             +      Q  + +   T   +   NL P Q  +  ++P ++Q+        TG+  P  
Sbjct: 2656 DLVSMATTQGVRAVTSVTASAVVTTNLTPVQTPARSLVPQVSQA--------TGVQLPGK 2707

Query: 1081 SLTPSNFPSPNQSSRAFQ 1098
            ++TP++F    Q  +  Q
Sbjct: 2708 TITPAHFQLLRQQQQQQQ 2725



 Score = 32.7 bits (73), Expect = 2.0
 Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 5/124 (4%)

Query: 557  KPLFHFNSDQANQQMPSVLPSQ----NKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQ 612
            KPL   N  Q N +  SVL       +KP L        + ++  ++++    QQ+ QQ 
Sbjct: 2443 KPLLGMNPFQKNPKHASVLAESGINYDKP-LPPIQVASLRAERIAKEKKALADQQKAQQP 2501

Query: 613  QQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQ 672
               Q    Q       QQ        Q    Q        Q Q Q Q Q Q QP   PA+
Sbjct: 2502 AVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAK 2561

Query: 673  SLPS 676
            + P+
Sbjct: 2562 AQPA 2565



 Score = 31.6 bits (70), Expect = 4.6
 Identities = 39/158 (24%), Positives = 50/158 (31%), Gaps = 18/158 (11%)

Query: 593 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQ---------- 642
           QQ     Q       Q  Q   Q+Q QQQ   S     Q  +S+     Q          
Sbjct: 506 QQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTGPPVQNAASLHTPLPQLPGRLPPAGV 565

Query: 643 -----QQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQN 697
                    Q  QQ Q  + Q Q Q    + QP   +P+ P  + P+P  Q    Q   +
Sbjct: 566 PTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSSQLPIPPSQP--AQLALH 623

Query: 698 QPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNP 735
            P  G   QV   Q      +V     P     PC  P
Sbjct: 624 VPTPGK-VQVQASQLSSLPQMVASTRLPVDPAPPCPRP 660


>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
            sapiens]
          Length = 1455

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 177/713 (24%), Positives = 257/713 (36%), Gaps = 152/713 (21%)

Query: 317  SVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIV------IKSEYSP 370
            SV P S+  L N      +Q         QQ   S+    + M++ +      I+SE  P
Sbjct: 791  SVHPQSENTLSNQQQQQQQQ---------QQVMESSAAMVMEMQQSICQAAAQIQSELFP 841

Query: 371  GLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEV 430
              T   +G+ Q  P     +  M  SALST+  +    +  + P   SG   +  + Q+V
Sbjct: 842  S-TASANGNLQQSPVYQQTSHMM--SALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQV 898

Query: 431  SH-----------------AQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPG 473
            +                    Q KQI  +  Q     QH   +QP       + +  S  
Sbjct: 899  ATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQ 958

Query: 474  PFGQEKIPSPSFGQQTFSPQSSPMPGVAGGS---GQSKVMANYMYKAGPSAQGGHLDVLM 530
              G ++  +  F       Q + M  +  G+     S   A   +   P A   +L    
Sbjct: 959  NSGTQQQGNGLF------QQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLS--- 1009

Query: 531  QQKPQDLSRSFINNPHPAMEPRQGNTK------PLFHFNSDQA---------NQQMPSVL 575
                Q+   S  ++P+P +  +   T       P+FH  S  A         +QQ  ++ 
Sbjct: 1010 ----QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIF 1065

Query: 576  PSQ--------------------NKPSLLHYTQQQQQQQQQQQQQ-----QQQQQQQQQQ 610
             SQ                    N  S L  T   +QQ   QQQ      Q     Q+Q 
Sbjct: 1066 LSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQA 1125

Query: 611  QQQQQQQQQQQSSISA-------QQQQ----QQQSSISAQQ-----QQQQQQQQQQQQQQ 654
            Q  QQ   Q Q ++ +       Q QQ    Q Q SI A Q     Q+QQQQQQQQQQQQ
Sbjct: 1126 QPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQ 1185

Query: 655  QQQQQQQQQQQPSSQPAQSLPSQPLLRSPL-PLQQKLLLQQMQNQPI-------AGMGYQ 706
            QQQQQ       ++    + P QP       P Q  +  Q+ QNQ I       A M  +
Sbjct: 1186 QQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQE 1245

Query: 707  VSQQQRQDQHSVVG-QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIM 765
                Q Q Q +V   QN GP+ S              +SQ  L +     + Q +Q    
Sbjct: 1246 QQPMQFQSQSTVSSLQNPGPTQSE-------------SSQTPLFHSS--PQIQLVQGSPS 1290

Query: 766  EQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG----NMQPTAQYSGGS 821
             Q+QQ+ L    L+ A   A Q  IN+   +  P Y  Q    G       P  Q +   
Sbjct: 1291 SQEQQVTL---FLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH 1347

Query: 822  STISLNSNQALANPVSTHTI-------LTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 874
            +T     NQ   +P S+          +  N S L TS    +P    A+   G   N  
Sbjct: 1348 NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE- 1406

Query: 875  CNQPNTYSVTSGMNQLTQQRNP--KQLLANQNNPMMPRPPTLGPSNNNNVATF 925
              QP    VT+ ++Q   + +P    +  NQN   +    +L    NN   +F
Sbjct: 1407 -GQP---PVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1455



 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 224/1036 (21%), Positives = 361/1036 (34%), Gaps = 194/1036 (18%)

Query: 232  TLPMSQAPLRKTNTLPSH-----THSP---GNGLFNMGLKEVKKEPGETLSCSKHMDGQM 283
            TLP+S      TN   SH     T++P     G  N+ +K+    P    S  + M    
Sbjct: 441  TLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVKKEISSPARPCSFEEAMKAMK 500

Query: 284  T------QENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIK-- 335
            T      + NI PN         LM P +     +  +++   ++  +  + I  T K  
Sbjct: 501  TTGCNLDKVNIIPNA--------LMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSV 552

Query: 336  ---QDDPFNID--LGQQSQRSTPRPSLPME----KIVIKSEYSPGLTQGPSGSPQLRPPS 386
               Q    NI    G  S  S     LP E    + +    Y+P  T     +  +  P 
Sbjct: 553  GSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPE-TLTTIQTQDISQPG 611

Query: 387  AGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRA-LPSWQEVSHAQQLKQIAANRQQ 445
              PA S A+S L  S    ++ Q   Q QT    SR  L S   V +  QL + +  +QQ
Sbjct: 612  TFPAVS-ASSQLPNSD---ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQ 667

Query: 446  HARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSG 505
                +Q Q   Q  + +  PS    S      +++ + SF   T S  S  +  V     
Sbjct: 668  SPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLE 727

Query: 506  QSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSD 565
              + +++ ++    SA  G+ +V  +Q   D+ +               +T+P  H   D
Sbjct: 728  AQQQLSSVLF----SAPDGNENV-QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPD 782

Query: 566  QANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSIS 625
                   ++LP + +         Q +     QQQQQQQQQQ  +       + QQS   
Sbjct: 783  -------NLLPGRAES-----VHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQ 830

Query: 626  AQQQQQQQ---SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRS 682
            A  Q Q +   S+ SA    QQ    QQ           +  Q   +   S P+     +
Sbjct: 831  AAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNET 890

Query: 683  PLPLQQKLLL--QQMQNQPIAGMGYQVSQQQRQDQHSVVG-----QNTGPS-PSPNPCSN 734
                 Q++      M     +G G +   Q +Q Q+SV       Q++G + P  N  S+
Sbjct: 891  STTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSS 950

Query: 735  PNTGSGYMNS----------QQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKI 784
              +     NS          QQ   N+ +  +     +Q    + QL   Q  +ADA+ +
Sbjct: 951  TKSMMSVQNSGTQQQGNGLFQQG--NEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNL 1008

Query: 785  APQDQINR-HLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-------------NQ 830
            + + Q +  H   P    +    +   MQP   +S  +  +   S             +Q
Sbjct: 1009 SQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQ 1068

Query: 831  ALANPVSTHTI------LTPN--SSLLSTSHGTRM--------------PSLS---TAVQ 865
            +  N + T+T+        PN  S L STS+  +               P LS       
Sbjct: 1069 SPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPP 1128

Query: 866  NMGMY------GNLPCN--------------------QPNTYSVTSGMNQLTQQRNPKQ- 898
              G++      G+LP N                    Q N+ S      Q  QQ+  +Q 
Sbjct: 1129 QQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQ 1188

Query: 899  ----LLANQN------NPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMP 948
                L +NQN      +P  P P  +   N N +A        N +Q   ++ H  ++M 
Sbjct: 1189 QQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMA--------NQEQQNQSIFHQQSNMA 1240

Query: 949  P--QRTSNVMITSNTTAPNWASQEGTSKQQEAL----TSAGVRFPTGTPAAYTPN----- 997
            P  Q    +   S +T  +  +   T  +        +S  ++   G+P++         
Sbjct: 1241 PMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFL 1300

Query: 998  -----QSLQQAVGSQQFSQRAVAPPNQLTPAVQ-----MRPMNQMSQTLNGQTMGPLRGL 1047
                  +LQ ++  Q   Q  +  P    P +Q      +P   +     G TM  L+  
Sbjct: 1301 SPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNS 1360

Query: 1048 NLRPNQLSTQIL----PNLNQSGTG----LNQSRTGINQPPSLTPSNFPSPNQSSRAFQG 1099
                 Q S   L     N +Q  T     L      I+QP    P N   P  ++   Q 
Sbjct: 1361 PGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQ--PQNEGQPPVTTLLSQQ 1418

Query: 1100 TDHSSDLAFDFLSQQN 1115
               +S LA    + QN
Sbjct: 1419 MPENSPLASSINTNQN 1434


>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
            sapiens]
          Length = 1531

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 177/713 (24%), Positives = 257/713 (36%), Gaps = 152/713 (21%)

Query: 317  SVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIV------IKSEYSP 370
            SV P S+  L N      +Q         QQ   S+    + M++ +      I+SE  P
Sbjct: 867  SVHPQSENTLSNQQQQQQQQ---------QQVMESSAAMVMEMQQSICQAAAQIQSELFP 917

Query: 371  GLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEV 430
              T   +G+ Q  P     +  M  SALST+  +    +  + P   SG   +  + Q+V
Sbjct: 918  S-TASANGNLQQSPVYQQTSHMM--SALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQV 974

Query: 431  SH-----------------AQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPG 473
            +                    Q KQI  +  Q     QH   +QP       + +  S  
Sbjct: 975  ATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQ 1034

Query: 474  PFGQEKIPSPSFGQQTFSPQSSPMPGVAGGS---GQSKVMANYMYKAGPSAQGGHLDVLM 530
              G ++  +  F       Q + M  +  G+     S   A   +   P A   +L    
Sbjct: 1035 NSGTQQQGNGLF------QQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLS--- 1085

Query: 531  QQKPQDLSRSFINNPHPAMEPRQGNTK------PLFHFNSDQA---------NQQMPSVL 575
                Q+   S  ++P+P +  +   T       P+FH  S  A         +QQ  ++ 
Sbjct: 1086 ----QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIF 1141

Query: 576  PSQ--------------------NKPSLLHYTQQQQQQQQQQQQQ-----QQQQQQQQQQ 610
             SQ                    N  S L  T   +QQ   QQQ      Q     Q+Q 
Sbjct: 1142 LSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQA 1201

Query: 611  QQQQQQQQQQQSSISA-------QQQQ----QQQSSISAQQ-----QQQQQQQQQQQQQQ 654
            Q  QQ   Q Q ++ +       Q QQ    Q Q SI A Q     Q+QQQQQQQQQQQQ
Sbjct: 1202 QPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQ 1261

Query: 655  QQQQQQQQQQQPSSQPAQSLPSQPLLRSPL-PLQQKLLLQQMQNQPI-------AGMGYQ 706
            QQQQQ       ++    + P QP       P Q  +  Q+ QNQ I       A M  +
Sbjct: 1262 QQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQE 1321

Query: 707  VSQQQRQDQHSVVG-QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIM 765
                Q Q Q +V   QN GP+ S              +SQ  L +     + Q +Q    
Sbjct: 1322 QQPMQFQSQSTVSSLQNPGPTQSE-------------SSQTPLFHSS--PQIQLVQGSPS 1366

Query: 766  EQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG----NMQPTAQYSGGS 821
             Q+QQ+ L    L+ A   A Q  IN+   +  P Y  Q    G       P  Q +   
Sbjct: 1367 SQEQQVTL---FLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH 1423

Query: 822  STISLNSNQALANPVSTHTI-------LTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 874
            +T     NQ   +P S+          +  N S L TS    +P    A+   G   N  
Sbjct: 1424 NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE- 1482

Query: 875  CNQPNTYSVTSGMNQLTQQRNP--KQLLANQNNPMMPRPPTLGPSNNNNVATF 925
              QP    VT+ ++Q   + +P    +  NQN   +    +L    NN   +F
Sbjct: 1483 -GQP---PVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1531



 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 224/1036 (21%), Positives = 361/1036 (34%), Gaps = 194/1036 (18%)

Query: 232  TLPMSQAPLRKTNTLPSH-----THSP---GNGLFNMGLKEVKKEPGETLSCSKHMDGQM 283
            TLP+S      TN   SH     T++P     G  N+ +K+    P    S  + M    
Sbjct: 517  TLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVKKEISSPARPCSFEEAMKAMK 576

Query: 284  T------QENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIK-- 335
            T      + NI PN         LM P +     +  +++   ++  +  + I  T K  
Sbjct: 577  TTGCNLDKVNIIPNA--------LMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSV 628

Query: 336  ---QDDPFNID--LGQQSQRSTPRPSLPME----KIVIKSEYSPGLTQGPSGSPQLRPPS 386
               Q    NI    G  S  S     LP E    + +    Y+P  T     +  +  P 
Sbjct: 629  GSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPE-TLTTIQTQDISQPG 687

Query: 387  AGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRA-LPSWQEVSHAQQLKQIAANRQQ 445
              PA S A+S L  S    ++ Q   Q QT    SR  L S   V +  QL + +  +QQ
Sbjct: 688  TFPAVS-ASSQLPNSD---ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQ 743

Query: 446  HARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSG 505
                +Q Q   Q  + +  PS    S      +++ + SF   T S  S  +  V     
Sbjct: 744  SPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLE 803

Query: 506  QSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSD 565
              + +++ ++    SA  G+ +V  +Q   D+ +               +T+P  H   D
Sbjct: 804  AQQQLSSVLF----SAPDGNENV-QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPD 858

Query: 566  QANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSIS 625
                   ++LP + +         Q +     QQQQQQQQQQ  +       + QQS   
Sbjct: 859  -------NLLPGRAES-----VHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQ 906

Query: 626  AQQQQQQQ---SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRS 682
            A  Q Q +   S+ SA    QQ    QQ           +  Q   +   S P+     +
Sbjct: 907  AAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNET 966

Query: 683  PLPLQQKLLL--QQMQNQPIAGMGYQVSQQQRQDQHSVVG-----QNTGPS-PSPNPCSN 734
                 Q++      M     +G G +   Q +Q Q+SV       Q++G + P  N  S+
Sbjct: 967  STTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSS 1026

Query: 735  PNTGSGYMNS----------QQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKI 784
              +     NS          QQ   N+ +  +     +Q    + QL   Q  +ADA+ +
Sbjct: 1027 TKSMMSVQNSGTQQQGNGLFQQG--NEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNL 1084

Query: 785  APQDQINR-HLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-------------NQ 830
            + + Q +  H   P    +    +   MQP   +S  +  +   S             +Q
Sbjct: 1085 SQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQ 1144

Query: 831  ALANPVSTHTI------LTPN--SSLLSTSHGTRM--------------PSLS---TAVQ 865
            +  N + T+T+        PN  S L STS+  +               P LS       
Sbjct: 1145 SPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPP 1204

Query: 866  NMGMY------GNLPCN--------------------QPNTYSVTSGMNQLTQQRNPKQ- 898
              G++      G+LP N                    Q N+ S      Q  QQ+  +Q 
Sbjct: 1205 QQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQ 1264

Query: 899  ----LLANQN------NPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMP 948
                L +NQN      +P  P P  +   N N +A        N +Q   ++ H  ++M 
Sbjct: 1265 QQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMA--------NQEQQNQSIFHQQSNMA 1316

Query: 949  P--QRTSNVMITSNTTAPNWASQEGTSKQQEAL----TSAGVRFPTGTPAAYTPN----- 997
            P  Q    +   S +T  +  +   T  +        +S  ++   G+P++         
Sbjct: 1317 PMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFL 1376

Query: 998  -----QSLQQAVGSQQFSQRAVAPPNQLTPAVQ-----MRPMNQMSQTLNGQTMGPLRGL 1047
                  +LQ ++  Q   Q  +  P    P +Q      +P   +     G TM  L+  
Sbjct: 1377 SPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNS 1436

Query: 1048 NLRPNQLSTQIL----PNLNQSGTG----LNQSRTGINQPPSLTPSNFPSPNQSSRAFQG 1099
                 Q S   L     N +Q  T     L      I+QP    P N   P  ++   Q 
Sbjct: 1437 PGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQ--PQNEGQPPVTTLLSQQ 1494

Query: 1100 TDHSSDLAFDFLSQQN 1115
               +S LA    + QN
Sbjct: 1495 MPENSPLASSINTNQN 1510


>gi|164419746 nuclear factor of activated T-cells 5 isoform d [Homo
            sapiens]
          Length = 1548

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 177/713 (24%), Positives = 257/713 (36%), Gaps = 152/713 (21%)

Query: 317  SVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIV------IKSEYSP 370
            SV P S+  L N      +Q         QQ   S+    + M++ +      I+SE  P
Sbjct: 884  SVHPQSENTLSNQQQQQQQQ---------QQVMESSAAMVMEMQQSICQAAAQIQSELFP 934

Query: 371  GLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEV 430
              T   +G+ Q  P     +  M  SALST+  +    +  + P   SG   +  + Q+V
Sbjct: 935  S-TASANGNLQQSPVYQQTSHMM--SALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQV 991

Query: 431  SH-----------------AQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPG 473
            +                    Q KQI  +  Q     QH   +QP       + +  S  
Sbjct: 992  ATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQ 1051

Query: 474  PFGQEKIPSPSFGQQTFSPQSSPMPGVAGGS---GQSKVMANYMYKAGPSAQGGHLDVLM 530
              G ++  +  F       Q + M  +  G+     S   A   +   P A   +L    
Sbjct: 1052 NSGTQQQGNGLF------QQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLS--- 1102

Query: 531  QQKPQDLSRSFINNPHPAMEPRQGNTK------PLFHFNSDQA---------NQQMPSVL 575
                Q+   S  ++P+P +  +   T       P+FH  S  A         +QQ  ++ 
Sbjct: 1103 ----QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIF 1158

Query: 576  PSQ--------------------NKPSLLHYTQQQQQQQQQQQQQ-----QQQQQQQQQQ 610
             SQ                    N  S L  T   +QQ   QQQ      Q     Q+Q 
Sbjct: 1159 LSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQA 1218

Query: 611  QQQQQQQQQQQSSISA-------QQQQ----QQQSSISAQQ-----QQQQQQQQQQQQQQ 654
            Q  QQ   Q Q ++ +       Q QQ    Q Q SI A Q     Q+QQQQQQQQQQQQ
Sbjct: 1219 QPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQ 1278

Query: 655  QQQQQQQQQQQPSSQPAQSLPSQPLLRSPL-PLQQKLLLQQMQNQPI-------AGMGYQ 706
            QQQQQ       ++    + P QP       P Q  +  Q+ QNQ I       A M  +
Sbjct: 1279 QQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQE 1338

Query: 707  VSQQQRQDQHSVVG-QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIM 765
                Q Q Q +V   QN GP+ S              +SQ  L +     + Q +Q    
Sbjct: 1339 QQPMQFQSQSTVSSLQNPGPTQSE-------------SSQTPLFHSS--PQIQLVQGSPS 1383

Query: 766  EQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG----NMQPTAQYSGGS 821
             Q+QQ+ L    L+ A   A Q  IN+   +  P Y  Q    G       P  Q +   
Sbjct: 1384 SQEQQVTL---FLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH 1440

Query: 822  STISLNSNQALANPVSTHTI-------LTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 874
            +T     NQ   +P S+          +  N S L TS    +P    A+   G   N  
Sbjct: 1441 NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE- 1499

Query: 875  CNQPNTYSVTSGMNQLTQQRNP--KQLLANQNNPMMPRPPTLGPSNNNNVATF 925
              QP    VT+ ++Q   + +P    +  NQN   +    +L    NN   +F
Sbjct: 1500 -GQP---PVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1548



 Score = 73.9 bits (180), Expect = 8e-13
 Identities = 224/1035 (21%), Positives = 359/1035 (34%), Gaps = 193/1035 (18%)

Query: 232  TLPMSQAPLRKTNTLPSH-------THSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMT 284
            TLP+S      TN   SH       T  P  G  N+ +K+    P    S  + M    T
Sbjct: 535  TLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEISSPARPCSFEEAMKAMKT 594

Query: 285  ------QENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIK--- 335
                  + NI PN         LM P +     +  +++   ++  +  + I  T K   
Sbjct: 595  TGCNLDKVNIIPNA--------LMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVG 646

Query: 336  --QDDPFNID--LGQQSQRSTPRPSLPME----KIVIKSEYSPGLTQGPSGSPQLRPPSA 387
              Q    NI    G  S  S     LP E    + +    Y+P  T     +  +  P  
Sbjct: 647  STQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPE-TLTTIQTQDISQPGT 705

Query: 388  GPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRA-LPSWQEVSHAQQLKQIAANRQQH 446
             PA S A+S L  S    ++ Q   Q QT    SR  L S   V +  QL + +  +QQ 
Sbjct: 706  FPAVS-ASSQLPNSD---ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQS 761

Query: 447  ARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQ 506
               +Q Q   Q  + +  PS    S      +++ + SF   T S  S  +  V      
Sbjct: 762  PLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEA 821

Query: 507  SKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQ 566
             + +++ ++    SA  G+ +V  +Q   D+ +               +T+P  H   D 
Sbjct: 822  QQQLSSVLF----SAPDGNENV-QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPD- 875

Query: 567  ANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISA 626
                  ++LP + +         Q +     QQQQQQQQQQ  +       + QQS   A
Sbjct: 876  ------NLLPGRAES-----VHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQA 924

Query: 627  QQQQQQQ---SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683
              Q Q +   S+ SA    QQ    QQ           +  Q   +   S P+     + 
Sbjct: 925  AAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETS 984

Query: 684  LPLQQKLLL--QQMQNQPIAGMGYQVSQQQRQDQHSVVG-----QNTGPS-PSPNPCSNP 735
                Q++      M     +G G +   Q +Q Q+SV       Q++G + P  N  S+ 
Sbjct: 985  TTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSST 1044

Query: 736  NTGSGYMNS----------QQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIA 785
             +     NS          QQ   N+ +  +     +Q    + QL   Q  +ADA+ ++
Sbjct: 1045 KSMMSVQNSGTQQQGNGLFQQG--NEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLS 1102

Query: 786  PQDQINR-HLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-------------NQA 831
             + Q +  H   P    +    +   MQP   +S  +  +   S             +Q+
Sbjct: 1103 QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQS 1162

Query: 832  LANPVSTHTI------LTPN--SSLLSTSHGTRM--------------PSLS---TAVQN 866
              N + T+T+        PN  S L STS+  +               P LS        
Sbjct: 1163 PMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQ 1222

Query: 867  MGMY------GNLPCN--------------------QPNTYSVTSGMNQLTQQRNPKQ-- 898
             G++      G+LP N                    Q N+ S      Q  QQ+  +Q  
Sbjct: 1223 QGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQ 1282

Query: 899  ---LLANQN------NPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPP 949
               L +NQN      +P  P P  +   N N +A        N +Q   ++ H  ++M P
Sbjct: 1283 QSILFSNQNTMATMASPKQPPPNMIFNPNQNPMA--------NQEQQNQSIFHQQSNMAP 1334

Query: 950  --QRTSNVMITSNTTAPNWASQEGTSKQQEAL----TSAGVRFPTGTPAAYTPN------ 997
              Q    +   S +T  +  +   T  +        +S  ++   G+P++          
Sbjct: 1335 MNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLS 1394

Query: 998  ----QSLQQAVGSQQFSQRAVAPPNQLTPAVQ-----MRPMNQMSQTLNGQTMGPLRGLN 1048
                 +LQ ++  Q   Q  +  P    P +Q      +P   +     G TM  L+   
Sbjct: 1395 PASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSP 1454

Query: 1049 LRPNQLSTQIL----PNLNQSGTG----LNQSRTGINQPPSLTPSNFPSPNQSSRAFQGT 1100
                Q S   L     N +Q  T     L      I+QP    P N   P  ++   Q  
Sbjct: 1455 GSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQ--PQNEGQPPVTTLLSQQM 1512

Query: 1101 DHSSDLAFDFLSQQN 1115
              +S LA    + QN
Sbjct: 1513 PENSPLASSINTNQN 1527


>gi|164419744 nuclear factor of activated T-cells 5 isoform b [Homo
            sapiens]
          Length = 1549

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 177/713 (24%), Positives = 257/713 (36%), Gaps = 152/713 (21%)

Query: 317  SVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIV------IKSEYSP 370
            SV P S+  L N      +Q         QQ   S+    + M++ +      I+SE  P
Sbjct: 885  SVHPQSENTLSNQQQQQQQQ---------QQVMESSAAMVMEMQQSICQAAAQIQSELFP 935

Query: 371  GLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEV 430
              T   +G+ Q  P     +  M  SALST+  +    +  + P   SG   +  + Q+V
Sbjct: 936  S-TASANGNLQQSPVYQQTSHMM--SALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQV 992

Query: 431  SH-----------------AQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPG 473
            +                    Q KQI  +  Q     QH   +QP       + +  S  
Sbjct: 993  ATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQ 1052

Query: 474  PFGQEKIPSPSFGQQTFSPQSSPMPGVAGGS---GQSKVMANYMYKAGPSAQGGHLDVLM 530
              G ++  +  F       Q + M  +  G+     S   A   +   P A   +L    
Sbjct: 1053 NSGTQQQGNGLF------QQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLS--- 1103

Query: 531  QQKPQDLSRSFINNPHPAMEPRQGNTK------PLFHFNSDQA---------NQQMPSVL 575
                Q+   S  ++P+P +  +   T       P+FH  S  A         +QQ  ++ 
Sbjct: 1104 ----QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIF 1159

Query: 576  PSQ--------------------NKPSLLHYTQQQQQQQQQQQQQ-----QQQQQQQQQQ 610
             SQ                    N  S L  T   +QQ   QQQ      Q     Q+Q 
Sbjct: 1160 LSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQA 1219

Query: 611  QQQQQQQQQQQSSISA-------QQQQ----QQQSSISAQQ-----QQQQQQQQQQQQQQ 654
            Q  QQ   Q Q ++ +       Q QQ    Q Q SI A Q     Q+QQQQQQQQQQQQ
Sbjct: 1220 QPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQ 1279

Query: 655  QQQQQQQQQQQPSSQPAQSLPSQPLLRSPL-PLQQKLLLQQMQNQPI-------AGMGYQ 706
            QQQQQ       ++    + P QP       P Q  +  Q+ QNQ I       A M  +
Sbjct: 1280 QQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQE 1339

Query: 707  VSQQQRQDQHSVVG-QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIM 765
                Q Q Q +V   QN GP+ S              +SQ  L +     + Q +Q    
Sbjct: 1340 QQPMQFQSQSTVSSLQNPGPTQSE-------------SSQTPLFHSS--PQIQLVQGSPS 1384

Query: 766  EQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG----NMQPTAQYSGGS 821
             Q+QQ+ L    L+ A   A Q  IN+   +  P Y  Q    G       P  Q +   
Sbjct: 1385 SQEQQVTL---FLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH 1441

Query: 822  STISLNSNQALANPVSTHTI-------LTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 874
            +T     NQ   +P S+          +  N S L TS    +P    A+   G   N  
Sbjct: 1442 NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE- 1500

Query: 875  CNQPNTYSVTSGMNQLTQQRNP--KQLLANQNNPMMPRPPTLGPSNNNNVATF 925
              QP    VT+ ++Q   + +P    +  NQN   +    +L    NN   +F
Sbjct: 1501 -GQP---PVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1549



 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 224/1036 (21%), Positives = 361/1036 (34%), Gaps = 194/1036 (18%)

Query: 232  TLPMSQAPLRKTNTLPSH-----THSP---GNGLFNMGLKEVKKEPGETLSCSKHMDGQM 283
            TLP+S      TN   SH     T++P     G  N+ +K+    P    S  + M    
Sbjct: 535  TLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVKKEISSPARPCSFEEAMKAMK 594

Query: 284  T------QENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIK-- 335
            T      + NI PN         LM P +     +  +++   ++  +  + I  T K  
Sbjct: 595  TTGCNLDKVNIIPNA--------LMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSV 646

Query: 336  ---QDDPFNID--LGQQSQRSTPRPSLPME----KIVIKSEYSPGLTQGPSGSPQLRPPS 386
               Q    NI    G  S  S     LP E    + +    Y+P  T     +  +  P 
Sbjct: 647  GSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPE-TLTTIQTQDISQPG 705

Query: 387  AGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRA-LPSWQEVSHAQQLKQIAANRQQ 445
              PA S A+S L  S    ++ Q   Q QT    SR  L S   V +  QL + +  +QQ
Sbjct: 706  TFPAVS-ASSQLPNSD---ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQ 761

Query: 446  HARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSG 505
                +Q Q   Q  + +  PS    S      +++ + SF   T S  S  +  V     
Sbjct: 762  SPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLE 821

Query: 506  QSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSD 565
              + +++ ++    SA  G+ +V  +Q   D+ +               +T+P  H   D
Sbjct: 822  AQQQLSSVLF----SAPDGNENV-QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPD 876

Query: 566  QANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSIS 625
                   ++LP + +         Q +     QQQQQQQQQQ  +       + QQS   
Sbjct: 877  -------NLLPGRAES-----VHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQ 924

Query: 626  AQQQQQQQ---SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRS 682
            A  Q Q +   S+ SA    QQ    QQ           +  Q   +   S P+     +
Sbjct: 925  AAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNET 984

Query: 683  PLPLQQKLLL--QQMQNQPIAGMGYQVSQQQRQDQHSVVG-----QNTGPS-PSPNPCSN 734
                 Q++      M     +G G +   Q +Q Q+SV       Q++G + P  N  S+
Sbjct: 985  STTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSS 1044

Query: 735  PNTGSGYMNS----------QQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKI 784
              +     NS          QQ   N+ +  +     +Q    + QL   Q  +ADA+ +
Sbjct: 1045 TKSMMSVQNSGTQQQGNGLFQQG--NEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNL 1102

Query: 785  APQDQINR-HLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-------------NQ 830
            + + Q +  H   P    +    +   MQP   +S  +  +   S             +Q
Sbjct: 1103 SQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQ 1162

Query: 831  ALANPVSTHTI------LTPN--SSLLSTSHGTRM--------------PSLS---TAVQ 865
            +  N + T+T+        PN  S L STS+  +               P LS       
Sbjct: 1163 SPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPP 1222

Query: 866  NMGMY------GNLPCN--------------------QPNTYSVTSGMNQLTQQRNPKQ- 898
              G++      G+LP N                    Q N+ S      Q  QQ+  +Q 
Sbjct: 1223 QQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQ 1282

Query: 899  ----LLANQN------NPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMP 948
                L +NQN      +P  P P  +   N N +A        N +Q   ++ H  ++M 
Sbjct: 1283 QQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMA--------NQEQQNQSIFHQQSNMA 1334

Query: 949  P--QRTSNVMITSNTTAPNWASQEGTSKQQEAL----TSAGVRFPTGTPAAYTPN----- 997
            P  Q    +   S +T  +  +   T  +        +S  ++   G+P++         
Sbjct: 1335 PMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFL 1394

Query: 998  -----QSLQQAVGSQQFSQRAVAPPNQLTPAVQ-----MRPMNQMSQTLNGQTMGPLRGL 1047
                  +LQ ++  Q   Q  +  P    P +Q      +P   +     G TM  L+  
Sbjct: 1395 SPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNS 1454

Query: 1048 NLRPNQLSTQIL----PNLNQSGTG----LNQSRTGINQPPSLTPSNFPSPNQSSRAFQG 1099
                 Q S   L     N +Q  T     L      I+QP    P N   P  ++   Q 
Sbjct: 1455 PGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQ--PQNEGQPPVTTLLSQQ 1512

Query: 1100 TDHSSDLAFDFLSQQN 1115
               +S LA    + QN
Sbjct: 1513 MPENSPLASSINTNQN 1528


>gi|27886524 nuclear factor of activated T-cells 5 isoform a [Homo
            sapiens]
          Length = 1455

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 177/713 (24%), Positives = 257/713 (36%), Gaps = 152/713 (21%)

Query: 317  SVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIV------IKSEYSP 370
            SV P S+  L N      +Q         QQ   S+    + M++ +      I+SE  P
Sbjct: 791  SVHPQSENTLSNQQQQQQQQ---------QQVMESSAAMVMEMQQSICQAAAQIQSELFP 841

Query: 371  GLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEV 430
              T   +G+ Q  P     +  M  SALST+  +    +  + P   SG   +  + Q+V
Sbjct: 842  S-TASANGNLQQSPVYQQTSHMM--SALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQV 898

Query: 431  SH-----------------AQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPG 473
            +                    Q KQI  +  Q     QH   +QP       + +  S  
Sbjct: 899  ATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQ 958

Query: 474  PFGQEKIPSPSFGQQTFSPQSSPMPGVAGGS---GQSKVMANYMYKAGPSAQGGHLDVLM 530
              G ++  +  F       Q + M  +  G+     S   A   +   P A   +L    
Sbjct: 959  NSGTQQQGNGLF------QQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLS--- 1009

Query: 531  QQKPQDLSRSFINNPHPAMEPRQGNTK------PLFHFNSDQA---------NQQMPSVL 575
                Q+   S  ++P+P +  +   T       P+FH  S  A         +QQ  ++ 
Sbjct: 1010 ----QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIF 1065

Query: 576  PSQ--------------------NKPSLLHYTQQQQQQQQQQQQQ-----QQQQQQQQQQ 610
             SQ                    N  S L  T   +QQ   QQQ      Q     Q+Q 
Sbjct: 1066 LSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQA 1125

Query: 611  QQQQQQQQQQQSSISA-------QQQQ----QQQSSISAQQ-----QQQQQQQQQQQQQQ 654
            Q  QQ   Q Q ++ +       Q QQ    Q Q SI A Q     Q+QQQQQQQQQQQQ
Sbjct: 1126 QPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQ 1185

Query: 655  QQQQQQQQQQQPSSQPAQSLPSQPLLRSPL-PLQQKLLLQQMQNQPI-------AGMGYQ 706
            QQQQQ       ++    + P QP       P Q  +  Q+ QNQ I       A M  +
Sbjct: 1186 QQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQE 1245

Query: 707  VSQQQRQDQHSVVG-QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIM 765
                Q Q Q +V   QN GP+ S              +SQ  L +     + Q +Q    
Sbjct: 1246 QQPMQFQSQSTVSSLQNPGPTQSE-------------SSQTPLFHSS--PQIQLVQGSPS 1290

Query: 766  EQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG----NMQPTAQYSGGS 821
             Q+QQ+ L    L+ A   A Q  IN+   +  P Y  Q    G       P  Q +   
Sbjct: 1291 SQEQQVTL---FLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH 1347

Query: 822  STISLNSNQALANPVSTHTI-------LTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 874
            +T     NQ   +P S+          +  N S L TS    +P    A+   G   N  
Sbjct: 1348 NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE- 1406

Query: 875  CNQPNTYSVTSGMNQLTQQRNP--KQLLANQNNPMMPRPPTLGPSNNNNVATF 925
              QP    VT+ ++Q   + +P    +  NQN   +    +L    NN   +F
Sbjct: 1407 -GQP---PVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1455



 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 224/1036 (21%), Positives = 361/1036 (34%), Gaps = 194/1036 (18%)

Query: 232  TLPMSQAPLRKTNTLPSH-----THSP---GNGLFNMGLKEVKKEPGETLSCSKHMDGQM 283
            TLP+S      TN   SH     T++P     G  N+ +K+    P    S  + M    
Sbjct: 441  TLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVKKEISSPARPCSFEEAMKAMK 500

Query: 284  T------QENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIK-- 335
            T      + NI PN         LM P +     +  +++   ++  +  + I  T K  
Sbjct: 501  TTGCNLDKVNIIPNA--------LMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSV 552

Query: 336  ---QDDPFNID--LGQQSQRSTPRPSLPME----KIVIKSEYSPGLTQGPSGSPQLRPPS 386
               Q    NI    G  S  S     LP E    + +    Y+P  T     +  +  P 
Sbjct: 553  GSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPE-TLTTIQTQDISQPG 611

Query: 387  AGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRA-LPSWQEVSHAQQLKQIAANRQQ 445
              PA S A+S L  S    ++ Q   Q QT    SR  L S   V +  QL + +  +QQ
Sbjct: 612  TFPAVS-ASSQLPNSD---ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQ 667

Query: 446  HARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSG 505
                +Q Q   Q  + +  PS    S      +++ + SF   T S  S  +  V     
Sbjct: 668  SPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLE 727

Query: 506  QSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSD 565
              + +++ ++    SA  G+ +V  +Q   D+ +               +T+P  H   D
Sbjct: 728  AQQQLSSVLF----SAPDGNENV-QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPD 782

Query: 566  QANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSIS 625
                   ++LP + +         Q +     QQQQQQQQQQ  +       + QQS   
Sbjct: 783  -------NLLPGRAES-----VHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQ 830

Query: 626  AQQQQQQQ---SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRS 682
            A  Q Q +   S+ SA    QQ    QQ           +  Q   +   S P+     +
Sbjct: 831  AAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNET 890

Query: 683  PLPLQQKLLL--QQMQNQPIAGMGYQVSQQQRQDQHSVVG-----QNTGPS-PSPNPCSN 734
                 Q++      M     +G G +   Q +Q Q+SV       Q++G + P  N  S+
Sbjct: 891  STTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSS 950

Query: 735  PNTGSGYMNS----------QQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKI 784
              +     NS          QQ   N+ +  +     +Q    + QL   Q  +ADA+ +
Sbjct: 951  TKSMMSVQNSGTQQQGNGLFQQG--NEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNL 1008

Query: 785  APQDQINR-HLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-------------NQ 830
            + + Q +  H   P    +    +   MQP   +S  +  +   S             +Q
Sbjct: 1009 SQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQ 1068

Query: 831  ALANPVSTHTI------LTPN--SSLLSTSHGTRM--------------PSLS---TAVQ 865
            +  N + T+T+        PN  S L STS+  +               P LS       
Sbjct: 1069 SPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPP 1128

Query: 866  NMGMY------GNLPCN--------------------QPNTYSVTSGMNQLTQQRNPKQ- 898
              G++      G+LP N                    Q N+ S      Q  QQ+  +Q 
Sbjct: 1129 QQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQ 1188

Query: 899  ----LLANQN------NPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMP 948
                L +NQN      +P  P P  +   N N +A        N +Q   ++ H  ++M 
Sbjct: 1189 QQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMA--------NQEQQNQSIFHQQSNMA 1240

Query: 949  P--QRTSNVMITSNTTAPNWASQEGTSKQQEAL----TSAGVRFPTGTPAAYTPN----- 997
            P  Q    +   S +T  +  +   T  +        +S  ++   G+P++         
Sbjct: 1241 PMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFL 1300

Query: 998  -----QSLQQAVGSQQFSQRAVAPPNQLTPAVQ-----MRPMNQMSQTLNGQTMGPLRGL 1047
                  +LQ ++  Q   Q  +  P    P +Q      +P   +     G TM  L+  
Sbjct: 1301 SPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNS 1360

Query: 1048 NLRPNQLSTQIL----PNLNQSGTG----LNQSRTGINQPPSLTPSNFPSPNQSSRAFQG 1099
                 Q S   L     N +Q  T     L      I+QP    P N   P  ++   Q 
Sbjct: 1361 PGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQ--PQNEGQPPVTTLLSQQ 1418

Query: 1100 TDHSSDLAFDFLSQQN 1115
               +S LA    + QN
Sbjct: 1419 MPENSPLASSINTNQN 1434


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.308    0.123    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,029,701
Number of Sequences: 37866
Number of extensions: 3032170
Number of successful extensions: 103911
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 799
Number of HSP's that attempted gapping in prelim test: 29947
Number of HSP's gapped (non-prelim): 24400
length of query: 1156
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1043
effective length of database: 13,968,660
effective search space: 14569312380
effective search space used: 14569312380
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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