RGP1 2613

Name: RGP1	Sequence: fasta or formatted (431aa)		NCBI GI: 122937426
Description: RGP1 retrograde golgi transport homolog		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 32 2 C cysteine 2.3 10 1 D aspartate 3.7 16 1 E glutamate 6.5 28 2 F phenylalanine 3.5 15 1 G glycine 7.4 32 2 H histidine 2.1 9 1 I isoleucine 3.5 15 1 K lysine 2.3 10 2 L leucine 10.4 45 2 M methionine 0.7 3 1 N asparagine 0.9 4 1 P proline 9.5 41 3 Q glutamine 3.9 17 1 R arginine 6.0 26 3 S serine 10.7 46 2 T threonine 7.2 31 2 V valine 8.6 37 2 W tryptophan 1.2 5 1 Y tyrosine 2.1 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RGP1 retrograde golgi transport homolog LOC100128695 0.012 PREDICTED: hypothetical protein LOC100128695 0.012 PREDICTED: hypothetical protein MUC5AC 0.011 mucin 5AC MUC5B 0.011 mucin 5, subtype B, tracheobronchial KIAA1310 0.009 hypothetical protein LOC55683 isoform a KIAA1310 0.009 hypothetical protein LOC55683 isoform b PCYT1B 0.008 choline phosphate cytidylyltransferase 1 beta isofo... PCYT1B 0.008 choline phosphate cytidylyltransferase 1 beta isofor... EP400 0.008 E1A binding protein p400 ICAM5 0.008 intercellular adhesion molecule 5 precursor LOC100288901 0.007 PREDICTED: hypothetical protein XP_002342617 ALG1 0.007 beta-1,4-mannosyltransferase POU2AF1 0.007 POU class 2 associating factor 1 C1orf127 0.007 hypothetical protein LOC148345 SHBG 0.006 sex hormone-binding globulin isoform 3 precursor [H... SHBG 0.006 sex hormone-binding globulin isoform 1 precursor [Hom... SHBG 0.006 sex hormone-binding globulin isoform 4 precursor [H... MUC16 0.006 mucin 16 URM1 0.006 ubiquitin related modifier 1 homolog isoform b [Hom... C9orf79 0.006 chromosome 9 open reading frame 79 RNF135 0.006 ring finger protein 135 isoform 1 LOC100292213 0.006 PREDICTED: similar to mannosyltransferase, partial ... LOC100133790 0.006 PREDICTED: intestinal mucin-like, partial ZFHX3 0.006 AT-binding transcription factor 1 LOC644366 0.005 PREDICTED: hypothetical protein LOC100294346 0.005 PREDICTED: hypothetical protein XP_002344115 ELK4 0.005 ELK4 protein isoform b ELK4 0.005 ELK4 protein isoform a ALG1L 0.005 asparagine-linked glycosylation 1-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.