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Search of human proteins with 32880229
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32880229 selenoprotein O [Homo sapiens]
(669 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32880229 selenoprotein O [Homo sapiens] 1342 0.0
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 0.001
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 41 0.003
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 41 0.003
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 41 0.004
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 41 0.004
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.020
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.020
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.020
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.020
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.020
gi|27735129 hypothetical protein LOC148345 [Homo sapiens] 38 0.035
gi|33356148 formin-like 1 [Homo sapiens] 38 0.035
gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 37 0.045
gi|33186895 selenoprotein V [Homo sapiens] 37 0.045
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 37 0.059
gi|50428940 mediator complex subunit 25 [Homo sapiens] 37 0.059
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 37 0.077
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 37 0.077
gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo ... 37 0.077
gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo ... 37 0.077
gi|160707881 formin 2 [Homo sapiens] 37 0.077
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 37 0.077
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 36 0.10
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 36 0.10
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 36 0.10
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 36 0.13
gi|31657109 zinc finger protein 282 [Homo sapiens] 36 0.13
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 35 0.17
>gi|32880229 selenoprotein O [Homo sapiens]
Length = 669
Score = 1342 bits (3473), Expect = 0.0
Identities = 669/669 (100%), Positives = 669/669 (100%)
Query: 1 MAVYRAALGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPV 60
MAVYRAALGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPV
Sbjct: 1 MAVYRAALGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPV 60
Query: 61 EAPPPGPEGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEA 120
EAPPPGPEGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEA
Sbjct: 61 EAPPPGPEGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEA 120
Query: 121 ALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGP 180
ALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGP
Sbjct: 121 ALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGP 180
Query: 181 TPFSRQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDVFYDGNPKYEQ 240
TPFSRQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDVFYDGNPKYEQ
Sbjct: 181 TPFSRQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDVFYDGNPKYEQ 240
Query: 241 CTVVLRVASTFIRFGSFEIFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHA 300
CTVVLRVASTFIRFGSFEIFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHA
Sbjct: 241 CTVVLRVASTFIRFGSFEIFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHA 300
Query: 301 SDSVQRNAAFFREVTRRTARMVAEWQCVGFCHGVLNTDNMSILGLTIDYGPFGFLDRYDP 360
SDSVQRNAAFFREVTRRTARMVAEWQCVGFCHGVLNTDNMSILGLTIDYGPFGFLDRYDP
Sbjct: 301 SDSVQRNAAFFREVTRRTARMVAEWQCVGFCHGVLNTDNMSILGLTIDYGPFGFLDRYDP 360
Query: 361 DHVCNASDNTGRYAYSKQPEVCRWNLRKLAEALQPELPLELGEAILAEEFDAEFQRHYLQ 420
DHVCNASDNTGRYAYSKQPEVCRWNLRKLAEALQPELPLELGEAILAEEFDAEFQRHYLQ
Sbjct: 361 DHVCNASDNTGRYAYSKQPEVCRWNLRKLAEALQPELPLELGEAILAEEFDAEFQRHYLQ 420
Query: 421 KMRRKLGLVQVELEEDGALVSKLLETMHLTGADFTNTFYLLSSFPVELESPGLAEFLARL 480
KMRRKLGLVQVELEEDGALVSKLLETMHLTGADFTNTFYLLSSFPVELESPGLAEFLARL
Sbjct: 421 KMRRKLGLVQVELEEDGALVSKLLETMHLTGADFTNTFYLLSSFPVELESPGLAEFLARL 480
Query: 481 MEQCASLEELRLAFRPQMDPRQLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLE 540
MEQCASLEELRLAFRPQMDPRQLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLE
Sbjct: 481 MEQCASLEELRLAFRPQMDPRQLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLE 540
Query: 541 QLSAAELQSRNQGHWADWLQAYRARLDKDLEGAGDAAAWQAEHVRVMHANNPKYVLRNYI 600
QLSAAELQSRNQGHWADWLQAYRARLDKDLEGAGDAAAWQAEHVRVMHANNPKYVLRNYI
Sbjct: 541 QLSAAELQSRNQGHWADWLQAYRARLDKDLEGAGDAAAWQAEHVRVMHANNPKYVLRNYI 600
Query: 601 AQNAIEAAERGDFSEVRRVLKLLETPYHCEAGAATDAEATEADGADGRQRSYSSKPPLWA 660
AQNAIEAAERGDFSEVRRVLKLLETPYHCEAGAATDAEATEADGADGRQRSYSSKPPLWA
Sbjct: 601 AQNAIEAAERGDFSEVRRVLKLLETPYHCEAGAATDAEATEADGADGRQRSYSSKPPLWA 660
Query: 661 AELCVTUSS 669
AELCVT SS
Sbjct: 661 AELCVTUSS 669
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 42.7 bits (99), Expect = 0.001
Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 14/169 (8%)
Query: 19 PLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE-----GAPSA 73
P+ +P+ APR+ + A P+P + RA RA P+ APPP P P+
Sbjct: 139 PVAAAAPARAPRAAAAAATAPPSP---GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Query: 74 PRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEAALFFSGNALLPGA 133
PR P +P PL P PA PP + E +G A P +
Sbjct: 196 PRRAPPPAVAAREP-PLPPPP----QPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVS 250
Query: 134 EPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTP 182
Y G G G+L G L E A R E GA P
Sbjct: 251 LREVVRYLGGS-GGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALP 298
Score = 32.7 bits (73), Expect = 1.1
Identities = 36/118 (30%), Positives = 42/118 (35%), Gaps = 19/118 (16%)
Query: 5 RAALGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPP 64
RA GA AAA P +P P P + ++ AA APR A A P
Sbjct: 113 RAPRGAPAAAAAAAPPPTPAPPPPP-APVAAAAPARAPR----------AAAAAATAPPS 161
Query: 65 PGPEGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEAAL 122
PGP A PR A P P P + + P APP A E L
Sbjct: 162 PGP--AQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPR------RAPPPAVAAREPPL 211
Score = 30.0 bits (66), Expect = 7.2
Identities = 40/126 (31%), Positives = 48/126 (38%), Gaps = 26/126 (20%)
Query: 2 AVYRAALGASLA---AARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRAL 58
AV R + S++ AAR+ P R + PAP GA A A
Sbjct: 81 AVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAA------------AAAPP 128
Query: 59 PVEAPPPGP----EGAPS-APRPVPGACFTRVQPTPLRQ-PRL-----VALSEPALALLG 107
P APPP P AP+ APR A P P + PR +A PA A
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPP 188
Query: 108 LGAPPA 113
APPA
Sbjct: 189 AVAPPA 194
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/125 (31%), Positives = 52/125 (41%), Gaps = 21/125 (16%)
Query: 8 LGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGP 67
LG+ L LP CSP+ PR +S EP LA R + + + PP P
Sbjct: 62 LGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLA--LAARRSQSPRVASTRSLRPPGSP 119
Query: 68 EGAPSAPRPVP---GACFTRVQPTPL------------RQPRLVALSEPAL----ALLGL 108
+PS+PRPVP +C + P+ R PR +LS PA A +G
Sbjct: 120 VPSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGT 179
Query: 109 GAPPA 113
P A
Sbjct: 180 RGPSA 184
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/125 (31%), Positives = 52/125 (41%), Gaps = 21/125 (16%)
Query: 8 LGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGP 67
LG+ L LP CSP+ PR +S EP LA R + + + PP P
Sbjct: 62 LGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLA--LAARRSQSPRVASTRSLRPPGSP 119
Query: 68 EGAPSAPRPVP---GACFTRVQPTPL------------RQPRLVALSEPAL----ALLGL 108
+PS+PRPVP +C + P+ R PR +LS PA A +G
Sbjct: 120 VPSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGT 179
Query: 109 GAPPA 113
P A
Sbjct: 180 RGPSA 184
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 40.8 bits (94), Expect = 0.004
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 25 PSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEG-------APSAPRPV 77
P P P L G++ EP P + +ALP PPP G AP P P+
Sbjct: 422 PPPPPPPLLPGSSAEPPPP-PPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPL 480
Query: 78 PGAC-FTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
PG+C F P PL P L +G G PP
Sbjct: 481 PGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPP 516
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 40.8 bits (94), Expect = 0.004
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 25 PSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEG-------APSAPRPV 77
P P P L G++ EP P + +ALP PPP G AP P P+
Sbjct: 422 PPPPPPPLLPGSSAEPPPP-PPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPL 480
Query: 78 PGAC-FTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
PG+C F P PL P L +G G PP
Sbjct: 481 PGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPP 516
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 38.5 bits (88), Expect = 0.020
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 22 RCSPSPAPRSTLSGAAMEP-----APRWLAGLRFDNRALRALPVEAPP-PGPEGAPSAPR 75
R + +P P T G +EP P+ +R D+R+ A+ + P PGPE +PS +
Sbjct: 201 RTASTPTPPQT--GGGLEPQANGETPQVAVIVRPDDRSQGAIIADRPGLPGPEHSPSESQ 258
Query: 76 PVPGACFTRVQPTPLRQPRLVALSEPALALLGL 108
P + PTP P L SEP LA+L +
Sbjct: 259 P------SSPSPTPSPSPVLEPGSEPNLAVLSI 285
>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
isoform 2 [Homo sapiens]
Length = 1512
Score = 38.5 bits (88), Expect = 0.020
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 22 RCSPSPAPRSTLSGAAMEP-----APRWLAGLRFDNRALRALPVEAPP-PGPEGAPSAPR 75
R + +P P T G +EP P+ +R D+R+ A+ + P PGPE +PS +
Sbjct: 114 RTASTPTPPQT--GGGLEPQANGETPQVAVIVRPDDRSQGAIIADRPGLPGPEHSPSESQ 171
Query: 76 PVPGACFTRVQPTPLRQPRLVALSEPALALLGL 108
P + PTP P L SEP LA+L +
Sbjct: 172 P------SSPSPTPSPSPVLEPGSEPNLAVLSI 198
>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
isoform 3 [Homo sapiens]
Length = 1435
Score = 38.5 bits (88), Expect = 0.020
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 22 RCSPSPAPRSTLSGAAMEP-----APRWLAGLRFDNRALRALPVEAPP-PGPEGAPSAPR 75
R + +P P T G +EP P+ +R D+R+ A+ + P PGPE +PS +
Sbjct: 37 RTASTPTPPQT--GGGLEPQANGETPQVAVIVRPDDRSQGAIIADRPGLPGPEHSPSESQ 94
Query: 76 PVPGACFTRVQPTPLRQPRLVALSEPALALLGL 108
P + PTP P L SEP LA+L +
Sbjct: 95 P------SSPSPTPSPSPVLEPGSEPNLAVLSI 121
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 38.5 bits (88), Expect = 0.020
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 22 RCSPSPAPRSTLSGAAMEP-----APRWLAGLRFDNRALRALPVEAPP-PGPEGAPSAPR 75
R + +P P T G +EP P+ +R D+R+ A+ + P PGPE +PS +
Sbjct: 201 RTASTPTPPQT--GGGLEPQANGETPQVAVIVRPDDRSQGAIIADRPGLPGPEHSPSESQ 258
Query: 76 PVPGACFTRVQPTPLRQPRLVALSEPALALLGL 108
P + PTP P L SEP LA+L +
Sbjct: 259 P------SSPSPTPSPSPVLEPGSEPNLAVLSI 285
>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
isoform 4 [Homo sapiens]
Length = 1403
Score = 38.5 bits (88), Expect = 0.020
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 22 RCSPSPAPRSTLSGAAMEP-----APRWLAGLRFDNRALRALPVEAPP-PGPEGAPSAPR 75
R + +P P T G +EP P+ +R D+R+ A+ + P PGPE +PS +
Sbjct: 5 RTASTPTPPQT--GGGLEPQANGETPQVAVIVRPDDRSQGAIIADRPGLPGPEHSPSESQ 62
Query: 76 PVPGACFTRVQPTPLRQPRLVALSEPALALLGL 108
P + PTP P L SEP LA+L +
Sbjct: 63 P------SSPSPTPSPSPVLEPGSEPNLAVLSI 89
>gi|27735129 hypothetical protein LOC148345 [Homo sapiens]
Length = 656
Score = 37.7 bits (86), Expect = 0.035
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 39 EPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRP---VPGACFTRVQPTPLRQPRL 95
+PA R R ++A PPPG G P P P +P VQ +P R PR
Sbjct: 274 KPARRGQTSASILPRVVQAQRGPQPPPGEAGIPGHPTPPATLPSEPVEGVQASPWR-PRP 332
Query: 96 VALSEPALAL-----LGLGAPPAREAEAEAALFFSG 126
V + PAL L +PPA E +L SG
Sbjct: 333 VLPTHPALTLPVSSDASSPSPPAPRPERPESLLVSG 368
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 37.7 bits (86), Expect = 0.035
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 18 LPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPP-PGPEGAPSAPRP 76
+P G SP AP + + A P P L GL A + P +APP PG P AP P
Sbjct: 521 VPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAP-P 579
Query: 77 VPG 79
+PG
Sbjct: 580 LPG 582
>gi|139394604 bromo adjacent homology domain containing 1 [Homo
sapiens]
Length = 780
Score = 37.4 bits (85), Expect = 0.045
Identities = 36/106 (33%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 1 MAVYRAALGASLAAARLLPLG--RCSPSPAPRSTLSGAAMEPAPRW--LAGLRFDNRALR 56
+A AA L+ R LPL R RST A P P+W + G +
Sbjct: 204 LASLNAAAFLKLSQERELPLRLPRAHAEVDGRSTEPPAPKAPRPKWPKVNGKNYPKAWQG 263
Query: 57 ALPVEAP-PPGPEGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEP 101
A EA PPG +G P P P C VQP+ QP AL P
Sbjct: 264 ASSGEAAGPPGWQGCPDEPWPSATPCGPSVQPS--HQPLSKALESP 307
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 37.4 bits (85), Expect = 0.045
Identities = 43/118 (36%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 24 SPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPS-APRPVPGACF 82
+PSPA S L + PAP + L AL +P PPP P P+ P PVP
Sbjct: 51 TPSPAGTSPL---VLTPAPAQIPTL-VPTPALARIPRLVPPPAPAWIPTPVPTPVPVRNP 106
Query: 83 TRVQPTPLR---QPRLVALSEPALALLGL-GAPPAREAEAEAALFFSGNALLPGAEPA 136
T V PTP R P V PA L G+ A P ++ AL L P EPA
Sbjct: 107 TPV-PTPARTLTPPVRVPAPAPAQLLAGIRAALPVLDSYLAPAL-----PLDPPPEPA 158
Score = 33.1 bits (74), Expect = 0.85
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 18 LPLGRCSPSPAPRSTLSGAAMEPAP---RWLAGLR-----FDNRALRALPVEAPP-PGPE 68
+P+ +P P P TL+ PAP + LAG+R D+ ALP++ PP P PE
Sbjct: 101 VPVRNPTPVPTPARTLTPPVRVPAPAPAQLLAGIRAALPVLDSYLAPALPLDPPPEPAPE 160
Query: 69 GAPSAPRPVP 78
P P P
Sbjct: 161 -LPLLPEEDP 169
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 37.0 bits (84), Expect = 0.059
Identities = 34/93 (36%), Positives = 39/93 (41%), Gaps = 18/93 (19%)
Query: 54 ALRALPVEAPP----PGPEGAPS---APRPVPGACFTRVQPTPLRQPRLVALSEPALALL 106
A A+PV APP P P AP+ AP P P A P P P + S+PA A
Sbjct: 2 ATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAA-----PVPAAAP--ASSSDPAAAAA 54
Query: 107 GLGAPPAREAEAEAALFFSGNAL----LPGAEP 135
AP A A+A AL LPG P
Sbjct: 55 ATAAPGQTPASAQAPAQTPAPALPGPALPGPFP 87
Score = 30.4 bits (67), Expect = 5.5
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 6 AALGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPP 65
AA AS+ A P P+ AP S+ AA A A P + P P
Sbjct: 20 AAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAA----TAAPGQTPASAQAPAQTPAP 75
Query: 66 GPEGAPSAPRPVPGACFTRVQPTPL 90
G P+ P P PG R+ P L
Sbjct: 76 ALPG-PALPGPFPGGRVVRLHPVIL 99
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 37.0 bits (84), Expect = 0.059
Identities = 40/118 (33%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 6 AALGASLAAARLLPLGRCSPSPAPRSTLSGA------AMEPAPRWLAGL--RFD--NRAL 55
A GA+L+AA PL P LS A A+E A AGL RF
Sbjct: 251 APSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQ 310
Query: 56 RALPVEAPPPGPEGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPA 113
+A P PP AP P PGA +P P QP LV+ P L P A
Sbjct: 311 QAAPGVGPPFSQAPAPQLPPGPPGA----PKPPPASQPSLVSTVAPGSGLAPTAQPGA 364
Score = 32.0 bits (71), Expect = 1.9
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 14/122 (11%)
Query: 5 RAALGASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRA----LRALPV 60
+ +GAS A + P G P P GAA P P LR N LR+L +
Sbjct: 593 QGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPI-LRPQNPGANPQLRSLLL 651
Query: 61 EAPPPGPEGAPSAPRPVPGACFTRVQP---TPLRQPRLVALSEPALALLGLGAPPAREAE 117
PP P P P A +QP L P L +P L L PPA+
Sbjct: 652 NPPP------PQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWP 705
Query: 118 AE 119
A+
Sbjct: 706 AQ 707
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 36.6 bits (83), Expect = 0.077
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 18 LPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPV 77
LP G PSP S+L G P P L G + R P P PG G P P P+
Sbjct: 648 LPEGVGIPSP---SSLPGGTAIPPPPPLPG------SARIPPPPPPLPGSAGIPPPPPPL 698
Query: 78 PGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
PG P PL P + P G G PP
Sbjct: 699 PGEAGMPPPPPPL--PGGPGIPPPPPFPGGPGIPP 731
Score = 33.5 bits (75), Expect = 0.65
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAA-MEPAPRWLAGLRFDNRALRALPVEA----P 63
G + + LP G P P P L G+A + P P L G LP EA P
Sbjct: 651 GVGIPSPSSLPGGTAIPPPPP---LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP 707
Query: 64 PPGPEGAPSAPRPVPGACFTRVQPTP----LRQPRLVALSEPALALLGLGAPPAREAEAE 119
PP G P P P P + P P + P PA +L G P + + E
Sbjct: 708 PPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLYKPE 767
Query: 120 AAL 122
L
Sbjct: 768 VQL 770
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 36.6 bits (83), Expect = 0.077
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 18 LPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPV 77
LP G PSP S+L G P P L G + R P P PG G P P P+
Sbjct: 657 LPEGVGIPSP---SSLPGGTAIPPPPPLPG------SARIPPPPPPLPGSAGIPPPPPPL 707
Query: 78 PGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
PG P PL P + P G G PP
Sbjct: 708 PGEAGMPPPPPPL--PGGPGIPPPPPFPGGPGIPP 740
Score = 33.5 bits (75), Expect = 0.65
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAA-MEPAPRWLAGLRFDNRALRALPVEA----P 63
G + + LP G P P P L G+A + P P L G LP EA P
Sbjct: 660 GVGIPSPSSLPGGTAIPPPPP---LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP 716
Query: 64 PPGPEGAPSAPRPVPGACFTRVQPTP----LRQPRLVALSEPALALLGLGAPPAREAEAE 119
PP G P P P P + P P + P PA +L G P + + E
Sbjct: 717 PPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLYKPE 776
Query: 120 AAL 122
L
Sbjct: 777 VQL 779
>gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo
sapiens]
Length = 177
Score = 36.6 bits (83), Expect = 0.077
Identities = 48/156 (30%), Positives = 56/156 (35%), Gaps = 17/156 (10%)
Query: 6 AALGASLAAARLLPLGRCSPSPAPRS---TLSGAAMEPAP-RWLAGLR--FDNRALRALP 59
A L S R L P P+PR G + P R GL + A +P
Sbjct: 12 ARLRVSARTVRPAMLAGLGPGPSPRRGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVP 71
Query: 60 VEAPPPGPEGAPSAP-RPVPGACFTRVQPTPLRQPRLVALSEPA----LALLGLGAPPAR 114
+ P P AP RPVPGA R +P P +P A P L G APPAR
Sbjct: 72 NASASPRPVSCRRAPPRPVPGAARWRGRPEP--RPGSPAGPAPTRARPLGAPGRSAPPAR 129
Query: 115 EAEAE----AALFFSGNALLPGAEPAAHCYCGHQFG 146
E E A + L P A A C G
Sbjct: 130 RRERELGTDARVGDGERELRPDARGRAEAVCSDHVG 165
>gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo
sapiens]
Length = 177
Score = 36.6 bits (83), Expect = 0.077
Identities = 48/156 (30%), Positives = 56/156 (35%), Gaps = 17/156 (10%)
Query: 6 AALGASLAAARLLPLGRCSPSPAPRS---TLSGAAMEPAP-RWLAGLR--FDNRALRALP 59
A L S R L P P+PR G + P R GL + A +P
Sbjct: 12 ARLRVSARTVRPAMLAGLGPGPSPRRGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVP 71
Query: 60 VEAPPPGPEGAPSAP-RPVPGACFTRVQPTPLRQPRLVALSEPA----LALLGLGAPPAR 114
+ P P AP RPVPGA R +P P +P A P L G APPAR
Sbjct: 72 NASASPRPVSCRRAPPRPVPGAARWRGRPEP--RPGSPAGPAPTRARPLGAPGRSAPPAR 129
Query: 115 EAEAE----AALFFSGNALLPGAEPAAHCYCGHQFG 146
E E A + L P A A C G
Sbjct: 130 RRERELGTDARVGDGERELRPDARGRAEAVCSDHVG 165
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 36.6 bits (83), Expect = 0.077
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 24 SPSPAP----RSTLSGAAM-EPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVP 78
SP P P S++ G M P P L G+ A+P P G E P P P+P
Sbjct: 857 SPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLP 916
Query: 79 GACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
GA P P P L P L G+ PP
Sbjct: 917 GAGI----PPPPPLPGAGILPLPPLPGAGIPPPP 946
Score = 34.7 bits (78), Expect = 0.29
Identities = 30/94 (31%), Positives = 33/94 (35%), Gaps = 6/94 (6%)
Query: 19 PLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVP 78
PL P P L GA + P P L + PPP P A P P+P
Sbjct: 901 PLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLP 960
Query: 79 GACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
GA PL P A P L G G PP
Sbjct: 961 GA------GIPLPPPLPGAGIPPPPPLPGAGIPP 988
Score = 33.1 bits (74), Expect = 0.85
Identities = 35/105 (33%), Positives = 40/105 (38%), Gaps = 24/105 (22%)
Query: 12 LAAARLLPL----GRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGP 67
L A +LPL G P P P L GAA+ P P L + PPP P
Sbjct: 926 LPGAGILPLPPLPGAGIPPPPP---LPGAAIPPPP-----------PLPGAGIPLPPPLP 971
Query: 68 EGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
P P+PGA + P P P A P L G G PP
Sbjct: 972 GAGIPPPPPLPGA---GIPPPP---PLPGAGIPPPPPLPGAGIPP 1010
Score = 32.0 bits (71), Expect = 1.9
Identities = 35/113 (30%), Positives = 40/113 (35%), Gaps = 10/113 (8%)
Query: 19 PLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVP 78
PL R P P L GA + P P L + + PPP P P P+P
Sbjct: 1145 PLPRVGIPPPP--PLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLP 1202
Query: 79 GACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEAALFFSGNALLP 131
GA P PL + P L G G PP L SG LLP
Sbjct: 1203 GAGIP--PPPPLPGMGIPPAPAPPLPPPGTGIPP------PPLLPVSGPPLLP 1247
Score = 31.6 bits (70), Expect = 2.5
Identities = 31/104 (29%), Positives = 38/104 (36%), Gaps = 19/104 (18%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE 68
GA + LP G P P P L GA + P P L + + PPP P
Sbjct: 1071 GAGIPPPPPLP-GAGIPPPPP---LPGAGIPPPP-----------PLPGVGIPPPPPLPG 1115
Query: 69 GAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
P P+PGA P P P P L +G+ PP
Sbjct: 1116 AGIPPPPPLPGAGI----PPPPPLPGAGIPPPPPLPRVGIPPPP 1155
Score = 31.2 bits (69), Expect = 3.2
Identities = 31/104 (29%), Positives = 39/104 (37%), Gaps = 19/104 (18%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE 68
GA + LP G P P P L GA + P P L + + PPP P
Sbjct: 1115 GAGIPPPPPLP-GAGIPPPPP---LPGAGIPPPP-----------PLPRVGIPPPPPLPG 1159
Query: 69 GAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
P P+PGA P P P + P L +G+ PP
Sbjct: 1160 AGIPPPPPLPGAGI----PPPPPLPGVGIPPPPPLPGVGIPPPP 1199
Score = 30.0 bits (66), Expect = 7.2
Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 21/104 (20%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE 68
GA++ LP G P P P L GA + P P L + PPP P
Sbjct: 950 GAAIPPPPPLP-GAGIPLPPP---LPGAGIPPPP-----------PLPGAGIPPPPPLPG 994
Query: 69 GAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
P P+PGA + P P P A P L G G PP
Sbjct: 995 AGIPPPPPLPGA---GIPPPP---PLPGAGIPPPPPLPGAGIPP 1032
Score = 30.0 bits (66), Expect = 7.2
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 21/104 (20%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE 68
GA + LP G P P P L GA + P P L + PPP P
Sbjct: 972 GAGIPPPPPLP-GAGIPPPPP---LPGAGIPPPP-----------PLPGAGIPPPPPLPG 1016
Query: 69 GAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
P P+PGA + P P P A P L G G PP
Sbjct: 1017 AGIPPPPPLPGA---GIPPPP---PLPGAGIPPPPPLPGAGIPP 1054
Score = 30.0 bits (66), Expect = 7.2
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 21/104 (20%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE 68
GA + LP G P P P L GA + P P L + PPP P
Sbjct: 994 GAGIPPPPPLP-GAGIPPPPP---LPGAGIPPPP-----------PLPGAGIPPPPPLPG 1038
Query: 69 GAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
P P+PGA + P P P A P L G G PP
Sbjct: 1039 AGIPPPPPLPGA---GIPPPP---PLPGAGIPPPPPLPGAGIPP 1076
Score = 30.0 bits (66), Expect = 7.2
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 21/104 (20%)
Query: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE 68
GA + LP G P P P L GA + P P L + PPP P
Sbjct: 1016 GAGIPPPPPLP-GAGIPPPPP---LPGAGIPPPP-----------PLPGAGIPPPPPLPG 1060
Query: 69 GAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPP 112
P P+PGA + P P P A P L G G PP
Sbjct: 1061 AGIPPPPPLPGA---GIPPPP---PLPGAGIPPPPPLPGAGIPP 1098
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 36.6 bits (83), Expect = 0.077
Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 13/103 (12%)
Query: 19 PLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVP 78
P GRC P PR + + A P PR GL P P P PS+ P P
Sbjct: 136 PPGRCPAPPHPRESTTSFASAP-PRPAPGLE---------PQRGPAASPPQEPSSRPPSP 185
Query: 79 GACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEAA 121
A + P PR +PA G PP EA AA
Sbjct: 186 PAGLSTEPAGPGTAPRPFLPGQPAEV---DGNPPPAAPEAPAA 225
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 36.2 bits (82), Expect = 0.10
Identities = 40/125 (32%), Positives = 51/125 (40%), Gaps = 17/125 (13%)
Query: 25 PSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALP----------VEAPPPGPEGAPSAP 74
P P P+ T + A ++ A A + F + R L V PPPGP A ++P
Sbjct: 717 PPPPPQVTSAIATLQQA----AAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASP 772
Query: 75 RPVPGACFTRVQPTPLRQPRLVALSE-PALALLGLGAPPAREAEAEAALFFSGNALLPGA 133
P P A +P R PR PA L G P R + A L S +L GA
Sbjct: 773 GPPPPASPPGAPASP-RAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGA 831
Query: 134 E-PAA 137
PAA
Sbjct: 832 PGPAA 836
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 36.2 bits (82), Expect = 0.10
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 25 PSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVPGACFTR 84
PSP ++ S A P +L A P++ PP P P +P P
Sbjct: 444 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP---- 499
Query: 85 VQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEAALF-----FSGNALLP 131
P PL P L P A L PP + + A F FS +A LP
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 551
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.10
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 25 PSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVPGACFTR 84
PSP ++ S A P +L A P++ PP P P +P P
Sbjct: 405 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP---- 460
Query: 85 VQPTPLRQPRLVALSEPALALLGLGAPPAREAEAEAALF-----FSGNALLP 131
P PL P L P A L PP + + A F FS +A LP
Sbjct: 461 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 512
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 36.2 bits (82), Expect = 0.10
Identities = 34/109 (31%), Positives = 41/109 (37%), Gaps = 17/109 (15%)
Query: 19 PLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVP 78
P +P P P S EP RW + R LP P P P P AP P P
Sbjct: 587 PTPPSTPVPLPEKRRS-ILREPTFRWTS-------LTRELPPPPPAPPP---PPAPSPPP 635
Query: 79 GACFTRVQPTPLRQPRL------VALSEPALALLGLGAPPAREAEAEAA 121
+ +P LR P+ + + E L LGAP A E E A
Sbjct: 636 APATSSRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPEPEPPPA 684
Score = 31.6 bits (70), Expect = 2.5
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 26/110 (23%)
Query: 15 ARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPEGAPSAP 74
A+L P P+P+P L + P P P+ PPP P P P
Sbjct: 399 AKLPPPPLTPPAPSPPPPLPPPSTSPPP----------------PLCPPPPPPVSPPPLP 442
Query: 75 RPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAP---PAREAEAEAA 121
P P + +P P +V PA G P P++ AE EAA
Sbjct: 443 SPPPPPAQEEQEESP---PPVV----PATCSRKRGRPPLTPSQRAEREAA 485
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 35.8 bits (81), Expect = 0.13
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 13/103 (12%)
Query: 25 PSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPP---PGPEGAPSAPRPVPGAC 81
P+P P SG + EP P R D + A E P P P G P P P+P
Sbjct: 19 PAPGPAVDASGGSAEPPPPLQPPGRRDLDEVEAPGPEEPARAVPAPSGLPPPPPPLPA-- 76
Query: 82 FTRVQPTPLRQP---RLVALSEPALALLGLGAPPAREAEAEAA 121
P QP E + A + AP A EA + AA
Sbjct: 77 -----PADQTQPPHGEASVAGEESTAGIPEAAPAAGEASSAAA 114
>gi|31657109 zinc finger protein 282 [Homo sapiens]
Length = 671
Score = 35.8 bits (81), Expect = 0.13
Identities = 41/138 (29%), Positives = 49/138 (35%), Gaps = 27/138 (19%)
Query: 58 LPVEAPPPGPEGAPSAPRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPAREAE 117
L V+ PPP P P+P P + QP P P + P G PP+R
Sbjct: 398 LMVKNPPPAP--PQPQPQPQPPQPQLQSQPQPQSLPPIAVAENP-------GGPPSR--- 445
Query: 118 AEAALFFSGNALLPG------AEPAAHCYCGHQFGQFAG-----QLGDGAAMYLGEVCTA 166
L G +LPG A P G G G + G GA G C
Sbjct: 446 ---GLLDDGFQVLPGERGSGEAPPGGDRSTGGGGGDGGGGGGGAEAGTGAGGGCGSCCPG 502
Query: 167 TGERWELQLKGAGPTPFS 184
G R L L GA P+S
Sbjct: 503 -GLRRSLLLHGARSKPYS 519
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 35.4 bits (80), Expect = 0.17
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 55 LRALPVEAPPPGPEGAPS---APRPVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAP 111
L P AP P P AP AP P PG + ++ P P L EPA +GL +
Sbjct: 275 LALTPARAPSPVPAPAPEPEPAPTPAPG---SELEVAPAPAPELQQAPEPA---VGLESA 328
Query: 112 PAREAEAEAA 121
PA E E A
Sbjct: 329 PAPALELEPA 338
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,151,433
Number of Sequences: 37866
Number of extensions: 1403129
Number of successful extensions: 8783
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 7929
Number of HSP's gapped (non-prelim): 1002
length of query: 669
length of database: 18,247,518
effective HSP length: 109
effective length of query: 560
effective length of database: 14,120,124
effective search space: 7907269440
effective search space used: 7907269440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.