RIMS1 27634

Name: RIMS1	Sequence: fasta or formatted (1692aa)		NCBI GI: 41054864
Description: regulating synaptic membrane exocytosis 1		Referenced in: PDZ Domain Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 101 3 C cysteine 1.2 21 1 D aspartate 5.0 84 2 E glutamate 7.4 126 4 F phenylalanine 1.5 25 2 G glycine 5.8 98 2 H histidine 3.0 51 2 I isoleucine 3.3 55 2 K lysine 6.3 106 3 L leucine 7.1 120 2 M methionine 2.2 37 1 N asparagine 1.7 29 2 P proline 8.2 138 3 Q glutamine 5.3 89 2 R arginine 9.9 168 3 S serine 12.5 212 5 T threonine 5.5 93 2 V valine 5.5 93 2 W tryptophan 0.8 14 1 Y tyrosine 1.9 32 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 regulating synaptic membrane exocytosis 1 RIMS2 0.335 regulating synaptic membrane exocytosis 2 isoform a... RIMS2 0.272 regulating synaptic membrane exocytosis 2 isoform b... RIMS3 0.108 regulating synaptic membrane exocytosis 3 RIMS4 0.086 regulating synaptic membrane exocytosis 4 PCLO 0.035 piccolo isoform 2 PCLO 0.035 piccolo isoform 1 SRRM1 0.018 serine/arginine repetitive matrix 1 NEFH 0.015 neurofilament, heavy polypeptide 200kDa PIK3C2B 0.015 phosphoinositide-3-kinase, class 2 beta polypeptide... SYTL4 0.014 synaptotagmin-like 4 SYTL4 0.014 synaptotagmin-like 4 SYTL1 0.014 synaptotagmin-like 1 RPH3A 0.014 rabphilin 3A homolog isoform 1 SYT3 0.013 synaptotagmin III SYT3 0.013 synaptotagmin III SYT3 0.013 synaptotagmin III SYTL2 0.013 synaptotagmin-like 2 isoform a ESYT1 0.013 extended synaptotagmin-like protein 1 RPH3A 0.013 rabphilin 3A homolog isoform 2 PIK3C2A 0.013 phosphoinositide-3-kinase, class 2 alpha polypeptid... SYT2 0.013 synaptotagmin II SYT2 0.013 synaptotagmin II SYTL5 0.013 synaptotagmin-like 5 isoform 1 SYTL5 0.013 synaptotagmin-like 5 isoform 2 SYTL5 0.013 synaptotagmin-like 5 isoform 1 DOC2A 0.013 double C2-like domains, alpha SRRM2 0.013 splicing coactivator subunit SRm300 PRKCA 0.012 protein kinase C, alpha SYTL2 0.012 synaptotagmin-like 2 isoform g Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.