Guide to the Human Genome
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Search of human proteins with 32307132

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32307132 NFS1 nitrogen fixation 1 [Homo sapiens]
         (457 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32307132 NFS1 nitrogen fixation 1 [Homo sapiens]                   909   0.0  
gi|156713448 selenocysteine lyase [Homo sapiens]                      213   3e-55
gi|157388923 molybdenum cofactor sulfurase [Homo sapiens]              57   3e-08
gi|239753371 PREDICTED: hypothetical protein [Homo sapiens]            38   0.017
gi|239747938 PREDICTED: hypothetical protein XP_002346476 [Homo ...    38   0.017
gi|239741833 PREDICTED: hypothetical protein XP_002342339 [Homo ...    38   0.017
gi|239757784 PREDICTED: hypothetical protein XP_002346335 [Homo ...    37   0.049
gi|239752293 PREDICTED: hypothetical protein [Homo sapiens]            37   0.049
gi|239746804 PREDICTED: hypothetical protein XP_002343853 [Homo ...    37   0.049
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     35   0.11 
gi|171543895 ataxin 2 [Homo sapiens]                                   33   0.54 
gi|4557289 alanine-glyoxylate aminotransferase [Homo sapiens]          33   0.70 
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]    32   1.6  
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]     32   1.6  
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             32   1.6  
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             32   1.6  
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]            31   2.0  
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ...    31   2.0  
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ...    31   2.0  
gi|24432032 zinc finger protein 503 [Homo sapiens]                     31   2.0  
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s...    31   2.7  
gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer...    31   2.7  
gi|13128980 proline rich 14 [Homo sapiens]                             31   2.7  
gi|4507369 tyrosine aminotransferase [Homo sapiens]                    30   3.5  
gi|32441283 Ral GEF with PH domain and SH3 binding motif 2 [Homo...    30   3.5  
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               30   3.5  
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    30   4.6  
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]               30   4.6  
gi|116089333 kelch domain containing 7A [Homo sapiens]                 30   4.6  
gi|14149793 glutamine rich 2 [Homo sapiens]                            30   4.6  

>gi|32307132 NFS1 nitrogen fixation 1 [Homo sapiens]
          Length = 457

 Score =  909 bits (2348), Expect = 0.0
 Identities = 457/457 (100%), Positives = 457/457 (100%)

Query: 1   MLLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLY 60
           MLLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLY
Sbjct: 1   MLLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLY 60

Query: 61  MDVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE 120
           MDVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE
Sbjct: 61  MDVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE 120

Query: 121 IIFTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQK 180
           IIFTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQK
Sbjct: 121 IIFTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQK 180

Query: 181 SGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRKVYFHTDAAQAVGKI 240
           SGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRKVYFHTDAAQAVGKI
Sbjct: 181 SGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRKVYFHTDAAQAVGKI 240

Query: 241 PLDVNDMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPL 300
           PLDVNDMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPL
Sbjct: 241 PLDVNDMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPL 300

Query: 301 VVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAY 360
           VVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAY
Sbjct: 301 VVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAY 360

Query: 361 VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVD 420
           VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVD
Sbjct: 361 VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVD 420

Query: 421 YTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457
           YTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH
Sbjct: 421 YTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457


>gi|156713448 selenocysteine lyase [Homo sapiens]
          Length = 445

 Score =  213 bits (542), Expect = 3e-55
 Identities = 151/442 (34%), Positives = 227/442 (51%), Gaps = 43/442 (9%)

Query: 37  APQSAVPADTAAAP----EVGPVLRPLYMDVQATTPLDPRVLDAMLPYLINYYGNPHSRT 92
           AP    PA  A+ P    +     R +YMD  ATTPL+P V+ AM   +   +GNP S  
Sbjct: 6   APGRDAPAPAASQPSGCGKHNSPERKVYMDYNATTPLEPEVIQAMTKAMWEAWGNPSS-P 64

Query: 93  HAYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFYRSR------- 145
           ++ G +++  +  AR+ +A +IG  P++IIFTSG TESNN+ I  V + + +        
Sbjct: 65  YSAGRKAKDIINAARESLAKMIGGKPQDIIFTSGGTESNNLVIHSVVKHFHANQTSKGHT 124

Query: 146 ----------KKHLITTQTEHKCV-LDSCRSLEAEGFQVTYLPVQK-SGIIDLKELEAAI 193
                     K H IT+  EH  + L     +E +   VT++PV K SG  ++ ++ AA+
Sbjct: 125 GGHHSPVKGAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQAEVDDILAAV 184

Query: 194 QPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRK----------VYFHTDAAQAVGKIPLD 243
           +P T LV++M  NNE G+  P+ EI +   +            +  HTDAAQA+GK  +D
Sbjct: 185 RPTTRLVTIMLANNETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVD 244

Query: 244 VNDMKIDLMSISGHKIYGPKGVGAIYIRRRPR-VRVEALQSGGGQERGMRSGTVPTPLVV 302
           V D+ +D ++I GHK YGP+ +GA+YIR       +  +  GGGQER  R GT  TP++ 
Sbjct: 245 VEDLGVDFLTIVGHKFYGPR-IGALYIRGLGEFTPLYPMLFGGGQERNFRPGTENTPMIA 303

Query: 303 GLGAACEVAQQEME-YD-HKRISK--LSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSF 358
           GLG A E+  Q  E Y+ H R  +  L ERL     +    +          P   N S 
Sbjct: 304 GLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRIHLNSQFPGTQRLPNTCNFSI 363

Query: 359 --AYVEGESLLMALKDVALSSGSACTS-ASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTT 415
               ++G  +L   + +  S G+AC S    +PS VL + G   D+A +++R  +GR TT
Sbjct: 364 RGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSYGVPFDVARNALRLSVGRSTT 423

Query: 416 EEEVDYTVEKCIQHVKRLREMS 437
             EVD  V+   Q V +L + +
Sbjct: 424 RAEVDLVVQDLKQAVAQLEDQA 445


>gi|157388923 molybdenum cofactor sulfurase [Homo sapiens]
          Length = 888

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 22/265 (8%)

Query: 49  APEVGPVLRPLYMDVQATTPLDPRVLDAMLPYLI-NYYGNPHSRTHAYGWESEAAMERAR 107
           A E   +   +Y+D    T      L++    L+ N YGNPHS+  +     +  +E+ R
Sbjct: 40  AREFSRLAGTVYLDHAGATLFSQSQLESFTSDLMENTYGNPHSQNISSKLTHDT-VEQVR 98

Query: 108 QQVASLIG--ADPREIIFTSGATESNNI---AIKGVARFYRSRKKHLITTQTEHKCVLDS 162
            ++ +     A+   +IFT+G+T +  +   A   V++   S           H  V+  
Sbjct: 99  YRILAHFHTTAEDYTVIFTAGSTAALKLVAEAFPWVSQGPESSGSRFCYLTDSHTSVVGM 158

Query: 163 CRSLEAEGFQVTYLPVQKSGIIDLKELEA-AIQPDTSLVSVMTV---NNEIGVKQPIAEI 218
                A    V   PV+   +   +E  A A  PD  L  +      +N  GV+ P++ I
Sbjct: 159 RNVTMA--INVISTPVRPEDLWSAEERSASASNPDCQLPHLFCYPAQSNFSGVRYPLSWI 216

Query: 219 GRICSSR--------KVYFHTDAAQAVGKIPLDVNDMKIDLMSISGHKIYG-PKGVGAIY 269
             + S R        K +   DAA  V   PLD++  + D + IS +KI+G P G+GA+ 
Sbjct: 217 EEVKSGRLHPVSTPGKWFVLLDAASYVSTSPLDLSAHQADFVPISFYKIFGFPTGLGALL 276

Query: 270 IRRRPRVRVEALQSGGGQERGMRSG 294
           +  R    +     GGG      +G
Sbjct: 277 VHNRAAPLLRKTYFGGGTASAYLAG 301


>gi|239753371 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 119

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 4   RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58
           RAA   AA AV AA    P +P  G RL  G   P+SA    T A  E GP L P
Sbjct: 50  RAALVAAAAAVAAASAAPPGSPALGNRLHAGGPLPRSA-SRPTRAGQESGPFLPP 103


>gi|239747938 PREDICTED: hypothetical protein XP_002346476 [Homo
           sapiens]
          Length = 119

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 4   RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58
           RAA   AA AV AA    P +P  G RL  G   P+SA    T A  E GP L P
Sbjct: 50  RAALVAAAAAVAAASAAPPGSPALGNRLHAGGPLPRSA-SRPTRAGQESGPFLPP 103


>gi|239741833 PREDICTED: hypothetical protein XP_002342339 [Homo
           sapiens]
          Length = 119

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 4   RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58
           RAA   AA AV AA    P +P  G RL  G   P+SA    T A  E GP L P
Sbjct: 50  RAALVAAAAAVAAASAAPPGSPALGNRLHAGGPLPRSA-SRPTRAGQESGPFLPP 103


>gi|239757784 PREDICTED: hypothetical protein XP_002346335 [Homo
          sapiens]
          Length = 97

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 12/73 (16%)

Query: 4  RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPA--------DTAAAPEVGPV 55
          R +  R   A+ A PGP PA P  G RL    RAP S  P+          +AAP  GP 
Sbjct: 24 RNSANRKTDAILATPGPPPAQPQGGGRL----RAPPSPAPSSGLLSQVWQPSAAPWYGPF 79

Query: 56 LRPLYMDVQATTP 68
            PL    Q   P
Sbjct: 80 SGPLLRKEQKRNP 92


>gi|239752293 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 97

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 12/73 (16%)

Query: 4  RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPA--------DTAAAPEVGPV 55
          R +  R   A+ A PGP PA P  G RL    RAP S  P+          +AAP  GP 
Sbjct: 24 RNSANRKTDAILATPGPPPAQPQGGGRL----RAPPSPAPSSGLLSQVWQPSAAPWYGPF 79

Query: 56 LRPLYMDVQATTP 68
            PL    Q   P
Sbjct: 80 SGPLLRKEQKRNP 92


>gi|239746804 PREDICTED: hypothetical protein XP_002343853 [Homo
          sapiens]
          Length = 97

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 12/73 (16%)

Query: 4  RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPA--------DTAAAPEVGPV 55
          R +  R   A+ A PGP PA P  G RL    RAP S  P+          +AAP  GP 
Sbjct: 24 RNSANRKTDAILATPGPPPAQPQGGGRL----RAPPSPAPSSGLLSQVWQPSAAPWYGPF 79

Query: 56 LRPLYMDVQATTP 68
            PL    Q   P
Sbjct: 80 SGPLLRKEQKRNP 92


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 24/64 (37%), Positives = 25/64 (39%)

Query: 8   RRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATT 67
           R AA A TA P P PA P    +      AP  A  A  A AP  GP   P         
Sbjct: 150 RAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREP 209

Query: 68  PLDP 71
           PL P
Sbjct: 210 PLPP 213


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 16  AAPGPKPAAPTRGLRLRVGDRAPQSAV----PADTAAAPEVGPVLRPLYMDVQ 64
           A+PG  PAAPTR   L      P+S V    PA     P   PV  PL M ++
Sbjct: 112 ASPGAPPAAPTRASPLGARASPPRSGVSLARPAPGCPRPACEPVYGPLTMSLK 164


>gi|4557289 alanine-glyoxylate aminotransferase [Homo sapiens]
          Length = 392

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 167 EAEGFQVTYLPVQKSGIIDLKELEAAIQPDTSLVSVMTVN-NEIGVKQPIAEIGRICSSR 225
           E  G +V  +     G   L+E+E  +     ++  +T   +  GV QP+   G +C   
Sbjct: 117 ERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRY 176

Query: 226 KVYFHTDAAQAVGKIPLDVNDMKIDLMSISGHK-IYGPKGVGAI 268
           K     D+  ++G  PL ++   ID++     K +  P G   I
Sbjct: 177 KCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLI 220


>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
          Length = 516

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 36/110 (32%), Positives = 40/110 (36%), Gaps = 27/110 (24%)

Query: 11  AVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPE----VGPVLRPLYMDVQAT 66
           AV  T +PGP+PAA T G                  AAAPE      P L P      A 
Sbjct: 252 AVETTPSPGPQPAALTTG-----------------EAAAPESPHQAEPYLSPSPSACTAV 294

Query: 67  TPLDPRVLDAMLPY-----LINYYGNPHSRTHAYGWESEAAMERARQQVA 111
               P  LD  + Y     L    G+P S T  YG    A      QQVA
Sbjct: 295 QEPSPGALDVTIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDPQQVA 343


>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
          Length = 503

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 36/110 (32%), Positives = 40/110 (36%), Gaps = 27/110 (24%)

Query: 11  AVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPE----VGPVLRPLYMDVQAT 66
           AV  T +PGP+PAA T G                  AAAPE      P L P      A 
Sbjct: 239 AVETTPSPGPQPAALTTG-----------------EAAAPESPHQAEPYLSPSPSACTAV 281

Query: 67  TPLDPRVLDAMLPY-----LINYYGNPHSRTHAYGWESEAAMERARQQVA 111
               P  LD  + Y     L    G+P S T  YG    A      QQVA
Sbjct: 282 QEPSPGALDVTIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDPQQVA 330


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 9   RAAVAVTAAPGPKPAAPTRGLRLR--VGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQAT 66
           R     + AP P P AP   L+ R       P ++ P   A +P V P   P  +D +A 
Sbjct: 478 RIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEP--GPGSLDAEAA 535

Query: 67  TPLDPRVLDAMLP 79
            P  P+   A  P
Sbjct: 536 APERPKAERAEAP 548


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 20/62 (32%), Positives = 25/62 (40%)

Query: 10   AAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPL 69
            +A+A T+AP P PAA +    +      P SA  A    AP       P    V A  P 
Sbjct: 1866 SALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPVSAPNPA 1925

Query: 70   DP 71
             P
Sbjct: 1926 PP 1927


>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 16  AAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLD 75
           A P P PAAPTR  RL  G R+      AD   +P  GPV            P  PR  +
Sbjct: 70  AGPSPSPAAPTRP-RLLHGRRSAGHVARAD--VSPPAGPV----------PAPTPPRARN 116

Query: 76  AMLPY 80
           A  P+
Sbjct: 117 AETPW 121


>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
           sapiens]
          Length = 336

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 16  AAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLD 75
           A P P PAAPTR  RL  G R+      AD   +P  GPV            P  PR  +
Sbjct: 70  AGPSPSPAAPTRP-RLLHGRRSAGHVARAD--VSPPAGPV----------PAPTPPRARN 116

Query: 76  AMLPY 80
           A  P+
Sbjct: 117 AETPW 121


>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
           sapiens]
          Length = 321

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 16  AAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLD 75
           A P P PAAPTR  RL  G R+      AD   +P  GPV            P  PR  +
Sbjct: 70  AGPSPSPAAPTRP-RLLHGRRSAGHVARAD--VSPPAGPV----------PAPTPPRARN 116

Query: 76  AMLPY 80
           A  P+
Sbjct: 117 AETPW 121


>gi|24432032 zinc finger protein 503 [Homo sapiens]
          Length = 646

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 13/81 (16%)

Query: 6   AWRRAAVAVTAAPGP--KPAAPTRGL--------RLRVGDRAPQSAVPADTAAAPEVGPV 55
           AW  A    ++ PGP   PA  T+           LR  +R P   +   TA     G +
Sbjct: 31  AWTSALSGNSSGPGPGSSPAGSTKPFVHAVPPSDPLRQANRLPIKVLKMLTA---RTGHI 87

Query: 56  LRPLYMDVQATTPLDPRVLDA 76
           L P Y+    +TP+ P  LDA
Sbjct: 88  LHPEYLQPLPSTPVSPIELDA 108


>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
            sapiens]
          Length = 3014

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 325  LSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSA 384
            L    + N   S P  V+   P H      +L++ +V+G  L + L D A  +G    S 
Sbjct: 1107 LFNNYVTNKSNSFPTGVIGCIPAHDPDVSDSLNYTFVQGNELRLLLLDPA--TGELQLSR 1164

Query: 385  SLEPSYVLRAI--GTDEDLAHSSIRFGIGRFT--TEEEVDYTVEKCIQHVKRLREMSPLW 440
             L+ +  L A+   +  D  HS   F   R T  T++ +  ++   ++++ + + +SPL 
Sbjct: 1165 DLDNNRPLEALMEVSVSDGIHSVTAFCTLRVTIITDDMLTNSITVRLENMSQEKFLSPLL 1224

Query: 441  EMVQDGI 447
             +  +G+
Sbjct: 1225 ALFVEGV 1231


>gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase
           2 [Homo sapiens]
          Length = 530

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 18  PGPKPAAPTRG---LRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58
           PGP PA P R    L LR   R P +AV A  AAA  +  V  P
Sbjct: 106 PGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAGMAGVAAP 149


>gi|13128980 proline rich 14 [Homo sapiens]
          Length = 585

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 9   RAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTP 68
           R AV    +  P+   P+RG+R   G       VP + A +P+VGP+L+    ++ A   
Sbjct: 518 RRAVEFRDSSLPRSRRPSRGVRAAGG-----RTVPPNVAPSPDVGPLLQQRLEELDALL- 571

Query: 69  LDPRVLDAMLPY 80
           L+   +D   P+
Sbjct: 572 LEEETVDREQPH 583


>gi|4507369 tyrosine aminotransferase [Homo sapiens]
          Length = 454

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 18/148 (12%)

Query: 68  PLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGA-----DPREII 122
           P DP V  AM   L +   N        G+        +R+++AS         + +++I
Sbjct: 88  PTDPEVTQAMKDALDSGKYN--------GYAPSIGFLSSREEIASYYHCPEAPLEAKDVI 139

Query: 123 FTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQKSG 182
            TSG +++ ++ +  +A    +  ++++  +           S+  E      LP +KS 
Sbjct: 140 LTSGCSQAIDLCLAVLA----NPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLP-EKSW 194

Query: 183 IIDLKELEAAIQPDTSLVSVMTVNNEIG 210
            IDLK+LE  I   T+ + V   +N  G
Sbjct: 195 EIDLKQLEYLIDEKTACLIVNNPSNPCG 222


>gi|32441283 Ral GEF with PH domain and SH3 binding motif 2 [Homo
           sapiens]
          Length = 583

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 29  LRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLDAMLPYLINYYGNP 88
           L++  G   P+SA   +    PEVG   +     V A   L P+      P   N   + 
Sbjct: 282 LKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQT----PPSPRNLIPHG 337

Query: 89  HSRTHAYGWESEAAMERARQQVASLIGADPREII 122
           H + H+ G+     M  A  + A+   A PR ++
Sbjct: 338 HRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLL 371


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 35/119 (29%), Positives = 41/119 (34%), Gaps = 23/119 (19%)

Query: 2   LLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYM 61
           LLR   RR A     +PG     P R   +R   + P  A P+  +A P   P L  +  
Sbjct: 256 LLRRRRRRGAGQPRTSPGGADGGPRRQNSVR---QRPPDASPSPGSARPAREPSLERV-- 310

Query: 62  DVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE 120
                 P  P  L               SR  A  WESEAA E A    A      P E
Sbjct: 311 ---GGHPTSPAAL---------------SRAWASSWESEAAPEPAAPPAAPSPPDSPAE 351


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 10/77 (12%)

Query: 5   AAWRRAAVAVTAAPGPKPAAPTRGLRL----RVGDRAPQSAV------PADTAAAPEVGP 54
           AA   A V+    PG   AAP  G++     RV   AP +A       PA TAA+  +GP
Sbjct: 318 AAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGP 377

Query: 55  VLRPLYMDVQATTPLDP 71
            ++       A  P  P
Sbjct: 378 TMQGALPSPAAVPPPAP 394


>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
          Length = 525

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 5   AAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQ 64
           AA   AA A  AAPGP P AP         D     A  A+ AA P    + R    + Q
Sbjct: 42  AAAAAAAAAAAAAPGPTPPAPPG----PGTDAQAAGAERAEEAAGPGAAALQREAAYNWQ 97

Query: 65  ATTP 68
           A+ P
Sbjct: 98  ASKP 101


>gi|116089333 kelch domain containing 7A [Homo sapiens]
          Length = 777

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 13  AVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGP 54
           A+T  P P+P   + G     G +A  +   A+ AA+P+ GP
Sbjct: 312 ALTEVPSPRPPPGSLGTGAASGGQAGDTKGAAERAASPQTGP 353


>gi|14149793 glutamine rich 2 [Homo sapiens]
          Length = 1663

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/121 (19%), Positives = 45/121 (37%)

Query: 29   LRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLDAMLPYLINYYGNP 88
            LR+ +      S+     + AP     L P  +D +AT P     +   +  L+  Y   
Sbjct: 1175 LRMIIESMLTSSSTLLSMSMAPHKAHTLAPGQIDPEATCPACSLDVSHQVSTLVRRYEQL 1234

Query: 89   HSRTHAYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFYRSRKKH 148
                ++      +   + ++Q   L+G     I+   G  E  NI    +   +R ++K 
Sbjct: 1235 QDMVNSLAVSRPSKKAKLQRQDEELLGRVQSAILQVQGDCEKLNITTSNLIEDHRQKQKD 1294

Query: 149  L 149
            +
Sbjct: 1295 I 1295


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,223,620
Number of Sequences: 37866
Number of extensions: 771315
Number of successful extensions: 2684
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 2632
Number of HSP's gapped (non-prelim): 80
length of query: 457
length of database: 18,247,518
effective HSP length: 106
effective length of query: 351
effective length of database: 14,233,722
effective search space: 4996036422
effective search space used: 4996036422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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