Guide to the Human Genome
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Name: TAT Sequence: fasta or formatted (454aa) NCBI GI: 4507369
Description:

tyrosine aminotransferase

Referenced in:

Amino Acid Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         30           2
 C cysteine            3.7         17           1
 D aspartate           4.8         22           1
 E glutamate           6.6         30           2
 F phenylalanine       3.3         15           1
 G glycine             6.6         30           2
 H histidine           2.0          9           1
 I isoleucine          6.8         31           1
 K lysine              5.5         25           2
 L leucine             9.9         45           2
 M methionine          3.3         15           2
 N asparagine          4.2         19           2
 P proline             7.0         32           1
 Q glutamine           2.9         13           1
 R arginine            4.6         21           2
 S serine              7.3         33           2
 T threonine           3.5         16           1
 V valine              6.8         31           2
 W tryptophan          1.1          5           1
 Y tyrosine            3.3         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tyrosine aminotransferase 
CCBL1                 0.065   kynurenine aminotransferase I isoform a 
CCBL1                 0.065   kynurenine aminotransferase I isoform a 
GPT2                  0.063   glutamic pyruvate transaminase 2 isoform 2 
GPT2                  0.063   glutamic pyruvate transaminase 2 isoform 1 
CCBL2                 0.060   kynurenine aminotransferase III isoform 1 
CCBL2                 0.060   kynurenine aminotransferase III isoform 2 
CCBL1                 0.054   kynurenine aminotransferase I isoform b 
GPT                   0.051   glutamic pyruvate transaminase 
ACCSL                 0.041   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCS                  0.038   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCS                  0.038   1-aminocyclopropane-1-carboxylate synthase homolog [...
AADAT                 0.022   kynurenine aminotransferase II 
AADAT                 0.022   kynurenine aminotransferase II 
KIAA1549              0.008   hypothetical protein LOC57670 
C2CD3                 0.008   C2 calcium-dependent domain containing 3 
ENPP6                 0.008   ectonucleotide pyrophosphatase/phosphodiesterase 6 [...
PHC2                  0.008   polyhomeotic-like 2 isoform a 
LAMA2                 0.007   laminin alpha 2 subunit isoform a precursor 
KIAA1797              0.006   hypothetical protein LOC54914 
NFS1                  0.006   NFS1 nitrogen fixation 1 
MYT1L                 0.006   myelin transcription factor 1-like 
EIF4ENIF1             0.004   eukaryotic translation initiation factor 4E nuclear i...
EPB41L5               0.004   erythrocyte membrane protein band 4.1 like 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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