Guide to the Human Genome
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Name: NFS1 Sequence: fasta or formatted (457aa) NCBI GI: 32307132
Description:

NFS1 nitrogen fixation 1

Referenced in:

Amino Acid Catabolism
Pteridines and Molybdopterin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         45           3
 C cysteine            1.5          7           1
 D aspartate           4.8         22           1
 E glutamate           6.3         29           3
 F phenylalanine       1.5          7           1
 G glycine             7.2         33           3
 H histidine           2.6         12           2
 I isoleucine          6.6         30           2
 K lysine              4.8         22           2
 L leucine             8.1         37           2
 M methionine          3.1         14           1
 N asparagine          2.2         10           2
 P proline             5.9         27           1
 Q glutamine           3.9         18           2
 R arginine            7.2         33           3
 S serine              7.2         33           2
 T threonine           5.0         23           2
 V valine              7.9         36           2
 W tryptophan          0.9          4           1
 Y tyrosine            3.3         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NFS1 nitrogen fixation 1 
SCLY                  0.213   selenocysteine lyase 
MOCOS                 0.036   molybdenum cofactor sulfurase 
LOC100293861          0.015   PREDICTED: hypothetical protein 
LOC100291362          0.015   PREDICTED: hypothetical protein XP_002346476 
LOC100286920          0.015   PREDICTED: hypothetical protein XP_002342339 
LOC100291637          0.014   PREDICTED: hypothetical protein XP_002346335 
LOC100289469          0.014   PREDICTED: hypothetical protein 
LOC100289469          0.014   PREDICTED: hypothetical protein XP_002343853 
SAMD1                 0.011   sterile alpha motif domain containing 1 
ATXN2                 0.009   ataxin 2 
AGXT                  0.009   alanine-glyoxylate aminotransferase 
IRF7                  0.008   interferon regulatory factor 7 isoform d 
IRF7                  0.008   interferon regulatory factor 7 isoform a 
C2orf55               0.008   hypothetical protein LOC343990 
BAT2D1                0.008   HBxAg transactivated protein 2 
LOC100292745          0.007   PREDICTED: hypothetical protein 
LOC100290074          0.007   PREDICTED: hypothetical protein XP_002346855 
LOC100287034          0.007   PREDICTED: hypothetical protein XP_002342693 
ZNF503                0.007   zinc finger protein 503 
CELSR1                0.007   cadherin EGF LAG seven-pass G-type receptor 1 
CHST2                 0.007   carbohydrate (N-acetylglucosamine-6-O) sulfotransfer...
PRR14                 0.007   proline rich 14 
TAT                   0.006   tyrosine aminotransferase 
RALGPS2               0.006   Ral GEF with PH domain and SH3 binding motif 2 [Homo...
DACT3                 0.006   thymus expressed gene 3-like 
TAF4                  0.006   TBP-associated factor 4 
BTBD2                 0.006   BTB (POZ) domain containing 2 
KLHDC7A               0.006   kelch domain containing 7A 
QRICH2                0.006   glutamine rich 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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