Search of human proteins with 31982921

Search of human proteins with 31982921

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31982921 vasohibin 2 isoform 1 [Homo sapiens]
         (311 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31982921 vasohibin 2 isoform 1 [Homo sapiens]                      638   0.0  
gi|210147525 vasohibin 2 isoform 2 [Homo sapiens]                     478   e-135
gi|210147527 vasohibin 2 isoform 3 [Homo sapiens]                     398   e-111
gi|7662454 vasohibin 1 [Homo sapiens]                                 270   9e-73
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]       33   0.42 
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         32   0.94 
gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain c...    31   1.2  
gi|215490134 hypothetical protein LOC286223 isoform 2 [Homo sapi...    31   1.6  
gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens]    31   1.6  
gi|148596968 tripartite motif-containing 8 [Homo sapiens]              30   2.1  
gi|66932994 histidine acid phosphatase domain containing 2A isof...    30   2.7  
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              30   3.6  
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]    30   3.6  
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    29   4.7  
gi|4758284 ephrin receptor EphB1 precursor [Homo sapiens]              29   4.7  
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]     29   4.7  
gi|223941846 zinc finger protein 652 [Homo sapiens]                    29   6.1  
gi|7662384 zinc finger protein 652 [Homo sapiens]                      29   6.1  
gi|57242782 MAX interactor 1 isoform a [Homo sapiens]                  29   6.1  
gi|47717116 MAX interactor 1 isoform b [Homo sapiens]                  29   6.1  
gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]                  29   6.1  
gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]                  29   6.1  
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]    29   6.1  
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]     29   6.1  
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]     29   6.1  
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]    29   6.1  
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]     29   6.1  
gi|60460897 butyrophilin-like 9 [Homo sapiens]                         29   6.1  
gi|119226260 calcium homeostasis endoplasmic reticulum protein [...    29   6.1  
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]         28   8.0  

>gi|31982921 vasohibin 2 isoform 1 [Homo sapiens]
          Length = 311

 Score =  638 bits (1646), Expect = 0.0
 Identities = 311/311 (100%), Positives = 311/311 (100%)

Query: 1   MTGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDKDGGVLFHVNKSGFPIDS 60
           MTGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDKDGGVLFHVNKSGFPIDS
Sbjct: 1   MTGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDKDGGVLFHVNKSGFPIDS 60

Query: 61  HTWERMWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKT 120
           HTWERMWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKT
Sbjct: 61  HTWERMWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKT 120

Query: 121 LHYLTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRT 180
           LHYLTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRT
Sbjct: 121 LHYLTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRT 180

Query: 181 LSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELE 240
           LSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELE
Sbjct: 181 LSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELE 240

Query: 241 KYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLS 300
           KYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLS
Sbjct: 241 KYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLS 300

Query: 301 TLNEVGYQIRI 311
           TLNEVGYQIRI
Sbjct: 301 TLNEVGYQIRI 311


>gi|210147525 vasohibin 2 isoform 2 [Homo sapiens]
          Length = 290

 Score =  478 bits (1230), Expect = e-135
 Identities = 245/290 (84%), Positives = 245/290 (84%), Gaps = 44/290 (15%)

Query: 66  MWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKTLHY-- 123
           MWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKTL Y  
Sbjct: 1   MWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKTLQYNH 60

Query: 124 ------------------------------------------LTNGQPSIERFPISFKTY 141
                                                     LTNGQPSIERFPISFKTY
Sbjct: 61  TGTQFFEIRKMRPLSGLMETAKEMTRESLPIKCLEAVILGIYLTNGQPSIERFPISFKTY 120

Query: 142 FSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRTLSDLIFDFEDSYKKYLHTVKK 201
           FSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRTLSDLIFDFEDSYKKYLHTVKK
Sbjct: 121 FSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRTLSDLIFDFEDSYKKYLHTVKK 180

Query: 202 VKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDMRMKILKPASAHSPTQ 261
           VKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDMRMKILKPASAHSPTQ
Sbjct: 181 VKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDMRMKILKPASAHSPTQ 240

Query: 262 VRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLSTLNEVGYQIRI 311
           VRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLSTLNEVGYQIRI
Sbjct: 241 VRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLSTLNEVGYQIRI 290


>gi|210147527 vasohibin 2 isoform 3 [Homo sapiens]
          Length = 251

 Score =  398 bits (1022), Expect = e-111
 Identities = 206/251 (82%), Positives = 206/251 (82%), Gaps = 44/251 (17%)

Query: 105 MTIPDWLQAIQNYMKTLHY----------------------------------------- 123
           MTIPDWLQAIQNYMKTL Y                                         
Sbjct: 1   MTIPDWLQAIQNYMKTLQYNHTGTQFFEIRKMRPLSGLMETAKEMTRESLPIKCLEAVIL 60

Query: 124 ---LTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRT 180
              LTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRT
Sbjct: 61  GIYLTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRT 120

Query: 181 LSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELE 240
           LSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELE
Sbjct: 121 LSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELE 180

Query: 241 KYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLS 300
           KYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLS
Sbjct: 181 KYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLS 240

Query: 301 TLNEVGYQIRI 311
           TLNEVGYQIRI
Sbjct: 241 TLNEVGYQIRI 251


>gi|7662454 vasohibin 1 [Homo sapiens]
          Length = 365

 Score =  270 bits (691), Expect = 9e-73
 Identities = 146/318 (45%), Positives = 194/318 (61%), Gaps = 47/318 (14%)

Query: 39  EEEDKDGGVLFHVNKSGFPIDSHTWERMWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQV 98
           EE+ +DGGV F VN+ G P+D  TWERMW HVAK+HP G ++   IR A  L K  IP V
Sbjct: 50  EEDLRDGGVPFFVNRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGATDLPKIPIPSV 109

Query: 99  PNYRLSMTIPDWLQAIQNYMKTLHY----------------------------------- 123
           P ++ S  +P+ L+A+Q Y++ L Y                                   
Sbjct: 110 PTFQPSTPVPERLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEMTKEALPIKC 169

Query: 124 ---------LTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDK 174
                    LTN  P++ERFPISFKTYFSGNYF H+VLG+   GRYG+LGMSRR +LM K
Sbjct: 170 LEAVILGIYLTNSMPTLERFPISFKTYFSGNYFRHIVLGVNFAGRYGALGMSRREDLMYK 229

Query: 175 PLTFRTLSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRAD 234
           P  FRTLS+L+ DFE +Y +  H +KKVK+G  V H+PHS + IEWK  VL+V ++ R D
Sbjct: 230 PPAFRTLSELVLDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDD 289

Query: 235 IRKELEKYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEK 294
            RKELE++ARDMR+KI K     SPT+ R +  S SP+R Q+SP RR  R E+ P+  +K
Sbjct: 290 FRKELERHARDMRLKIGKGTGPPSPTKDRKKDVS-SPQRAQSSPHRRNSRSERRPS-GDK 347

Query: 295 KVADLSTLNEV-GYQIRI 311
           K ++   + ++ GYQIR+
Sbjct: 348 KTSEPKAMPDLNGYQIRV 365


>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
          Length = 1007

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 12/58 (20%)

Query: 243 ARDMRMKILKPASAHSPTQVRSRG-----------KSLSPRRRQASPPRR-LGRREKS 288
           +R  R K   P +  SPT+ RSR            +S SPRRR  SP RR  GRR +S
Sbjct: 422 SRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRS 479



 Score = 32.3 bits (72), Expect = 0.55
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 232 RADIRKELEKYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASP-PRRLGRREKSPA 290
           R   R E +K  + ++    K AS+    +  SR    SP+RR  SP PR   RR +SP 
Sbjct: 312 RKSKRSETDKEKKPIKSPS-KDASSGKENRSPSRRPGRSPKRRSLSPKPRDKSRRSRSPL 370

Query: 291 LPEKK 295
           L +++
Sbjct: 371 LNDRR 375


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 31.6 bits (70), Expect = 0.94
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 253 PASAHSPTQVRSRGKSLSPR---RRQASPPRRLGRREKSPALPEKK 295
           P+ + SP+  R R K  SPR   RR  SPP    RR  SPA P ++
Sbjct: 525 PSRSASPSP-RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRR 569



 Score = 30.4 bits (67), Expect = 2.1
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 236 RKELEKYARDMRMKILKPASAHSPTQ-VRSRGKSLSPRRR--QASPPRRLGRREKSPALP 292
           ++E  +  R  + +   P    SP +  R R  S SPR R    SP     ++EK+P LP
Sbjct: 165 KRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELP 224

Query: 293 EKKV 296
           E  V
Sbjct: 225 EPSV 228



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/60 (28%), Positives = 26/60 (43%)

Query: 236 RKELEKYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKK 295
           R+      R  R       S+ S +  RSR     P +R +SPPR+  R   S + P ++
Sbjct: 339 RRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRR 398



 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 247 RMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSP 289
           R +   P+      + RSR +S SPRRR  SP RR   R ++P
Sbjct: 287 RTRSRSPSHTRPRRRHRSRSRSYSPRRR-PSPRRRPSPRRRTP 328



 Score = 28.9 bits (63), Expect = 6.1
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 253 PASAHSPTQVRSRGKSLSPRRRQA-SPPRRLGRREKSPALPEK 294
           P ++ SP  VR RG S SP+RRQ+ SP  R  RR      P+K
Sbjct: 691 PQTSSSPPPVR-RGASSSPQRRQSPSPSTRPIRRVSRTPEPKK 732


>gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing A [Homo sapiens]
          Length = 312

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 6/38 (15%)

Query: 258 SPTQVRSRGKSLSPRRRQASP------PRRLGRREKSP 289
           SPT    R +S SPRRR  SP      PRR   R KSP
Sbjct: 226 SPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSP 263


>gi|215490134 hypothetical protein LOC286223 isoform 2 [Homo
           sapiens]
          Length = 183

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 4   SAADTHRCPHPKGAKGTRSRSSHAR------PVSLATSGGSEEEDKDGGVLFHVNKSGF- 56
           ++A+T   P P G +       H R      PV+ A S   E   + GG LFH  +S + 
Sbjct: 98  ASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYN 157

Query: 57  PIDSHTWERM-WMHVAKVH 74
            ++ +TW ++  + V K H
Sbjct: 158 GLELNTWMKVERLFVEKFH 176


>gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens]
          Length = 202

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 4   SAADTHRCPHPKGAKGTRSRSSHAR------PVSLATSGGSEEEDKDGGVLFHVNKSGF- 56
           ++A+T   P P G +       H R      PV+ A S   E   + GG LFH  +S + 
Sbjct: 117 ASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYN 176

Query: 57  PIDSHTWERM-WMHVAKVH 74
            ++ +TW ++  + V K H
Sbjct: 177 GLELNTWMKVERLFVEKFH 195


>gi|148596968 tripartite motif-containing 8 [Homo sapiens]
          Length = 551

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/45 (35%), Positives = 20/45 (44%)

Query: 93  PSIPQVPNYRLSMTIPDWLQAIQNYMKTLHYLTNGQPSIERFPIS 137
           P  P VP    S+ + DWL A Q       Y   GQPS + +  S
Sbjct: 507 PPTPSVPQSLPSLAVRDWLDASQQPGHQDFYRVYGQPSTKHYVTS 551


>gi|66932994 histidine acid phosphatase domain containing 2A isoform
           4 [Homo sapiens]
          Length = 1194

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 30/177 (16%)

Query: 143 SGNYFHHVVLGIYCNGRY-----GSLGMSRRAELMDKPLTFRTLSDLIFDFEDSYKKY-- 195
           SG Y    +  IY   +Y     GSLG+   AEL+      + L+D++   E    +   
Sbjct: 727 SGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLS---KALADVVIPQEYGISREEK 783

Query: 196 --------LHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDMR 247
                   L  ++K+ + L   HE       E+ + VL+  + +R  +    E +   + 
Sbjct: 784 LEIAVGFCLPLLRKILLDLQRTHED------EYSRGVLSPGRHVRTRLYFTSESHVHSL- 836

Query: 248 MKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLSTLNE 304
           + + +       TQ   R    SP+     PP   G   +SP +  +K   +  L+E
Sbjct: 837 LSVFRYGGLLDETQDADRALQTSPQ-----PPEGPGLPRRSPLIRNRKAGSMEVLSE 888


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 236  RKELEKYARDMRMKILK-PASAHSPTQVRS-RGKSLSPRRRQASPPRRLGRREKSPA 290
            RKE   + RD R +  + P+S H   + R  R +   P+ R  SP R+   RE SPA
Sbjct: 1147 RKESVAWPRDRRKRRSRSPSSEHRAREHRRPRSREKWPQTRSHSPERKGAVREASPA 1203


>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
          Length = 282

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 35/135 (25%)

Query: 176 LTFRTLSDLIFDFEDSYKKYLHTVKKVKIG-LYVPHEPHSFQP-------------IEWK 221
           LT+RT  D +    + Y +         +G +Y+P EPH+  P              +  
Sbjct: 21  LTYRTSPDSLRRVFEKYGR---------VGDVYIPREPHTKAPRGFAFVRFHDRRDAQDA 71

Query: 222 QLVLNVSKMLRADIRKELEKYA-RDMRMKILKPASAHSPTQVRSRG-----KSLSPRRRQ 275
           +  ++ +++   ++R ++ +Y  RD+      P S     + RSRG     +S S  RR 
Sbjct: 72  EAAMDGAELDGRELRVQVARYGRRDL------PRSRQGEPRGRSRGGGYGRRSRSYGRRS 125

Query: 276 ASPPRRLGRREKSPA 290
            SP RR   R + P+
Sbjct: 126 RSPRRRHRSRSRGPS 140


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 226  NVSKMLRADIRKELEKYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRR 285
            ++  M  ADI K ++     + ++I+     +SPT   S  K  SP  +Q+   ++    
Sbjct: 982  SIINMPHADIVKLIKDAGLSVTLRIIPQEELNSPTSAPSSEKQ-SPMAQQSPLAQQSPLA 1040

Query: 286  EKSPALPEKKVA 297
            + SPA P   +A
Sbjct: 1041 QPSPATPNSPIA 1052


>gi|4758284 ephrin receptor EphB1 precursor [Homo sapiens]
          Length = 984

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 15/81 (18%)

Query: 67  WMHVAKVHPKGGEMVGA----IRNAAFL-------AKPSIP----QVPNYRLSMTIPDWL 111
           W       P+  E+V      IRN A L       A PS P     +P++    T+ DWL
Sbjct: 861 WQKDRNSRPRFAEIVNTLDKMIRNPASLKTVATITAVPSQPLLDRSIPDFTAFTTVDDWL 920

Query: 112 QAIQNYMKTLHYLTNGQPSIE 132
            AI+       +LT G  S++
Sbjct: 921 SAIKMVQYRDSFLTAGFTSLQ 941


>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
          Length = 951

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 2/26 (7%)

Query: 263 RSRGKSLSPRRRQASPPRRLGRREKS 288
           RSR +S SPRRR  SP RR  R E+S
Sbjct: 801 RSRSRSRSPRRRAHSPERR--REERS 824


>gi|223941846 zinc finger protein 652 [Homo sapiens]
          Length = 606

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 254 ASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKK 295
           A+  SPT   +RG     RR+   PP+R  R  K P  P +K
Sbjct: 200 AATTSPTPRTTRG-----RRKSVEPPKRKKRATKEPKAPVQK 236


>gi|7662384 zinc finger protein 652 [Homo sapiens]
          Length = 606

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 254 ASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKK 295
           A+  SPT   +RG     RR+   PP+R  R  K P  P +K
Sbjct: 200 AATTSPTPRTTRG-----RRKSVEPPKRKKRATKEPKAPVQK 236


>gi|57242782 MAX interactor 1 isoform a [Homo sapiens]
          Length = 228

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 270 SPRRRQASPPRRLGRREK-SPALPEKKVADLSTLNEV 305
           SPR + + PPRRL R +K S        A+ ST NE+
Sbjct: 39  SPRLQHSKPPRRLSRAQKHSSGSSNTSTANRSTHNEL 75


>gi|47717116 MAX interactor 1 isoform b [Homo sapiens]
          Length = 295

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 270 SPRRRQASPPRRLGRREK-SPALPEKKVADLSTLNEV 305
           SPR + + PPRRL R +K S        A+ ST NE+
Sbjct: 106 SPRLQHSKPPRRLSRAQKHSSGSSNTSTANRSTHNEL 142


>gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]
          Length = 1726

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 191 SYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDMRMKI 250
           +Y+  L  V + +   +  + P +     W   V + SK    D  +E E++      K 
Sbjct: 830 NYEGRLEAVSRKQGAQFKEYRPETGS---WVFKVSHFSKYGLQDSDEEEEEHPSKTSTKK 886

Query: 251 LK-----PASAHSPTQVRSRGKSLSPRRRQASPPRRLGR 284
           LK     PAS  +P Q+   GK   P + Q+    +LGR
Sbjct: 887 LKTAPLPPASQTTPLQMALNGKPAPPPQSQSPEVEQLGR 925


>gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]
          Length = 1800

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 191 SYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDMRMKI 250
           +Y+  L  V + +   +  + P +     W   V + SK    D  +E E++      K 
Sbjct: 830 NYEGRLEAVSRKQGAQFKEYRPETGS---WVFKVSHFSKYGLQDSDEEEEEHPSKTSTKK 886

Query: 251 LK-----PASAHSPTQVRSRGKSLSPRRRQASPPRRLGR 284
           LK     PAS  +P Q+   GK   P + Q+    +LGR
Sbjct: 887 LKTAPLPPASQTTPLQMALNGKPAPPPQSQSPEVEQLGR 925


>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 2   TGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDKDGGVL-FHVNKSGFPIDS 60
           TGSA+ TH    P G +G    S H R  +     G+     DG  +  H+N    PI S
Sbjct: 102 TGSASATHGGGSPPGTRGP-GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQS 160

Query: 61  HTWERMWM 68
               R+ M
Sbjct: 161 EPRVRLVM 168


>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 2   TGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDKDGGVL-FHVNKSGFPIDS 60
           TGSA+ TH    P G +G    S H R  +     G+     DG  +  H+N    PI S
Sbjct: 102 TGSASATHGGGSPPGTRGP-GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQS 160

Query: 61  HTWERMWM 68
               R+ M
Sbjct: 161 EPRVRLVM 168


>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 2   TGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDKDGGVL-FHVNKSGFPIDS 60
           TGSA+ TH    P G +G    S H R  +     G+     DG  +  H+N    PI S
Sbjct: 102 TGSASATHGGGSPPGTRGP-GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQS 160

Query: 61  HTWERMWM 68
               R+ M
Sbjct: 161 EPRVRLVM 168


>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
          Length = 1132

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 2   TGSAADTHRCPHPKGAKGTRSRSSHARPVSLATSGGSEEEDKDGGVL-FHVNKSGFPIDS 60
           TGSA+ TH    P G +G    S H R  +     G+     DG  +  H+N    PI S
Sbjct: 102 TGSASATHGGGSPPGTRGP-GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQS 160

Query: 61  HTWERMWM 68
               R+ M
Sbjct: 161 EPRVRLVM 168


>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
          Length = 484

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 236 RKELEKYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKK 295
           R+     +R  R +      +HS +  RSR +S SPRRR+ S  R  GRR +S +    K
Sbjct: 257 RRRTPSSSRHRRSRSRSRRRSHSKS--RSRRRSKSPRRRR-SHSRERGRRSRSTSKTRDK 313


>gi|60460897 butyrophilin-like 9 [Homo sapiens]
          Length = 535

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 240 EKYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASP 278
           +KYA D+    L PASAH   +V   GKS+S R     P
Sbjct: 324 QKYAVDVT---LDPASAHPSLEVSEDGKSVSSRGAPPGP 359


>gi|119226260 calcium homeostasis endoplasmic reticulum protein
           [Homo sapiens]
          Length = 916

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 252 KPASAHSPTQVRSRGKSLSPRRRQAS------PPRRLGRREKS-PALPEKKVAD 298
           + + + S +Q RSR KS SP RR+ S      PP   G    S P +P+ ++ +
Sbjct: 788 RSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLGE 841


>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
          Length = 1317

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 221  KQLVLNVSKMLRADIRKELEKYARDMRMKILKPASAHSPTQVRSRGKSLS 270
            K+L  N  + + A+ R  LEKY RD    +L+  SA SP  +   G +LS
Sbjct: 1246 KKLFGNKDERVIAERRSHLEKYLRDFFSVMLQ--SATSPLHINKVGLTLS 1293


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,686,943
Number of Sequences: 37866
Number of extensions: 587319
Number of successful extensions: 2320
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2283
Number of HSP's gapped (non-prelim): 56
length of query: 311
length of database: 18,247,518
effective HSP length: 102
effective length of query: 209
effective length of database: 14,385,186
effective search space: 3006503874
effective search space used: 3006503874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.