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Search of human proteins with 31563394
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo
sapiens]
(114 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo ... 224 9e-60
gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ... 223 3e-59
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom... 174 1e-44
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom... 172 4e-44
gi|31563402 chemokine-like factor superfamily 1 isoform 5 [Homo ... 96 5e-21
gi|31563396 chemokine-like factor superfamily 1 isoform 3 [Homo ... 95 1e-20
gi|31563398 chemokine-like factor superfamily 1 isoform 4 [Homo ... 94 2e-20
gi|93141024 chemokine-like factor isoform e [Homo sapiens] 80 3e-16
gi|8393581 chemokine-like factor isoform a [Homo sapiens] 80 3e-16
gi|32307156 chemokine-like factor isoform d [Homo sapiens] 59 8e-10
gi|31563424 chemokine-like factor superfamily 1 isoform 12 [Homo... 58 1e-09
gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens] 49 9e-07
gi|4505893 proteolipid protein 2 (colonic epithelium-enriched) [... 44 4e-05
gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens] 34 0.029
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens] 34 0.029
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens] 34 0.029
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens] 34 0.029
gi|32307154 chemokine-like factor isoform b [Homo sapiens] 28 1.2
gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ... 28 2.0
gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ... 28 2.0
gi|169205554 PREDICTED: hypothetical protein, partial [Homo sapi... 26 7.8
gi|115529486 ATPase, Cu++ transporting, alpha polypeptide [Homo ... 26 7.8
gi|12965172 taste receptor, type 2, member 9 [Homo sapiens] 26 7.8
>gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo
sapiens]
Length = 114
Score = 224 bits (572), Expect = 9e-60
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
Query: 61 ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR 114
ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR
Sbjct: 61 ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR 114
>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
sapiens]
Length = 169
Score = 223 bits (567), Expect = 3e-59
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
Query: 61 ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG
Sbjct: 61 ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
sapiens]
Length = 231
Score = 174 bits (442), Expect = 1e-44
Identities = 93/104 (89%), Positives = 95/104 (91%), Gaps = 4/104 (3%)
Query: 11 SEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 70
S +P+G LK LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH
Sbjct: 132 SFSPTGMLK----ILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 187
Query: 71 LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR 114
LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR
Sbjct: 188 LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR 231
Score = 58.5 bits (140), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAALS 28
MDPEHAKPESSEAPSGNLKQPETAAAL+
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAALA 28
>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
sapiens]
Length = 286
Score = 172 bits (437), Expect = 4e-44
Identities = 92/103 (89%), Positives = 94/103 (91%), Gaps = 4/103 (3%)
Query: 11 SEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 70
S +P+G LK LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH
Sbjct: 132 SFSPTGMLK----ILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 187
Query: 71 LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG
Sbjct: 188 LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 230
Score = 58.5 bits (140), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAALS 28
MDPEHAKPESSEAPSGNLKQPETAAAL+
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAALA 28
>gi|31563402 chemokine-like factor superfamily 1 isoform 5 [Homo
sapiens]
Length = 61
Score = 96.3 bits (238), Expect = 5e-21
Identities = 61/114 (53%), Positives = 61/114 (53%), Gaps = 53/114 (46%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
MDPEHAKPESSEAPSGNLKQPETAAA
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAA---------------------------------- 26
Query: 61 ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR 114
LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR
Sbjct: 27 -------------------LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGR 61
>gi|31563396 chemokine-like factor superfamily 1 isoform 3 [Homo
sapiens]
Length = 122
Score = 94.7 bits (234), Expect = 1e-20
Identities = 61/113 (53%), Positives = 63/113 (55%), Gaps = 47/113 (41%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
MDPEHAKPESSEAPSGNLKQPETAAAL A+ +
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAAL--------------ASSGSV------------- 33
Query: 61 ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
DLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG
Sbjct: 34 --------------------DLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 66
>gi|31563398 chemokine-like factor superfamily 1 isoform 4 [Homo
sapiens]
Length = 116
Score = 94.4 bits (233), Expect = 2e-20
Identities = 60/113 (53%), Positives = 60/113 (53%), Gaps = 53/113 (46%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
MDPEHAKPESSEAPSGNLKQPETAAA
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAA---------------------------------- 26
Query: 61 ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG
Sbjct: 27 -------------------LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 60
>gi|93141024 chemokine-like factor isoform e [Homo sapiens]
Length = 113
Score = 80.1 bits (196), Expect = 3e-16
Identities = 35/74 (47%), Positives = 55/74 (74%)
Query: 27 LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
L+L + ++ FII QA E +I IT E+ +++FFIL+YVL L L+ +L WPLLD+ NS+
Sbjct: 26 LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSL 85
Query: 87 ITAVFLSVVAILAM 100
+T VF+ +V++LA+
Sbjct: 86 VTTVFMLIVSVLAL 99
>gi|8393581 chemokine-like factor isoform a [Homo sapiens]
Length = 152
Score = 80.1 bits (196), Expect = 3e-16
Identities = 35/74 (47%), Positives = 55/74 (74%)
Query: 27 LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
L+L + ++ FII QA E +I IT E+ +++FFIL+YVL L L+ +L WPLLD+ NS+
Sbjct: 26 LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSL 85
Query: 87 ITAVFLSVVAILAM 100
+T VF+ +V++LA+
Sbjct: 86 VTTVFMLIVSVLAL 99
>gi|32307156 chemokine-like factor isoform d [Homo sapiens]
Length = 120
Score = 58.9 bits (141), Expect = 8e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 27 LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
L+L + ++ FII QA E +I IT E+ +++FFIL+YVL L L+ +L WPL L ++
Sbjct: 26 LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPL--LVFAL 83
Query: 87 ITAV 90
+TAV
Sbjct: 84 VTAV 87
>gi|31563424 chemokine-like factor superfamily 1 isoform 12 [Homo
sapiens]
Length = 28
Score = 58.2 bits (139), Expect = 1e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 1 MDPEHAKPESSEAPSGNLKQPETAAAL 27
MDPEHAKPESSEAPSGNLKQPETAAAL
Sbjct: 1 MDPEHAKPESSEAPSGNLKQPETAAAL 27
>gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
Length = 248
Score = 48.9 bits (115), Expect = 9e-07
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 33 ALACFIITQANESFIT-------ITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNS 85
+L C I S +T I ++EI FFIL+Y +H + ++ WP+ DL N
Sbjct: 94 SLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFND 153
Query: 86 IITAVFLSVVAILAMQEKKRRHLLYV 111
+I FL + A++ ++ +L Y+
Sbjct: 154 LIACAFLVGAVVFAVRSRRSMNLHYL 179
>gi|4505893 proteolipid protein 2 (colonic epithelium-enriched)
[Homo sapiens]
Length = 152
Score = 43.5 bits (101), Expect = 4e-05
Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 25 AALSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTN 84
A + L L L CF + + + +++ +E+ + F ++Y+ LH + +++WP D
Sbjct: 30 AEIILCLVILICF--SASTPGYSSLSVIEMILAAIFFVVYMCDLHTKIPFINWPWSDFFR 87
Query: 85 SIITAVFLSVVAILAMQEKKRRHLLYVG 112
++I A+ + +I+ + E+ + G
Sbjct: 88 TLIAAILYLITSIVVLVERGNHSKIVAG 115
>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 33.9 bits (76), Expect = 0.029
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 36 CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
C++ + A+ +F+T LE + ++F+ + L+ L WP++D + A+ +
Sbjct: 58 CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116
Query: 96 AILAM 100
+I A+
Sbjct: 117 SITAI 121
>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 33.9 bits (76), Expect = 0.029
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 36 CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
C++ + A+ +F+T LE + ++F+ + L+ L WP++D + A+ +
Sbjct: 58 CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116
Query: 96 AILAM 100
+I A+
Sbjct: 117 SITAI 121
>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 33.9 bits (76), Expect = 0.029
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 36 CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
C++ + A+ +F+T LE + ++F+ + L+ L WP++D + A+ +
Sbjct: 58 CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116
Query: 96 AILAM 100
+I A+
Sbjct: 117 SITAI 121
>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 33.9 bits (76), Expect = 0.029
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 36 CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
C++ + A+ +F+T LE + ++F+ + L+ L WP++D + A+ +
Sbjct: 58 CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116
Query: 96 AILAM 100
+I A+
Sbjct: 117 SITAI 121
>gi|32307154 chemokine-like factor isoform b [Homo sapiens]
Length = 99
Score = 28.5 bits (62), Expect = 1.2
Identities = 10/21 (47%), Positives = 18/21 (85%)
Query: 80 LDLTNSIITAVFLSVVAILAM 100
LD+ NS++T VF+ +V++LA+
Sbjct: 26 LDIINSLVTTVFMLIVSVLAL 46
>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
sapiens]
Length = 208
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 46 FITITSLEICIVVFFILI-YVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAIL 98
F S +V +LI + L LH + ++W L DL N+ ++A + +I+
Sbjct: 86 FFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV 139
>gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
sapiens]
Length = 234
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 46 FITITSLEICIVVFFILI-YVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAIL 98
F S +V +LI + L LH + ++W L DL N+ ++A + +I+
Sbjct: 86 FFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV 139
>gi|169205554 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 180
Score = 25.8 bits (55), Expect = 7.8
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Query: 50 TSLEICIVVF-----FILIYVLTLHHLLTYLH 76
T + +CI ++ ++ IY+ T H+ Y+H
Sbjct: 26 TCIRVCIHIYVYIHIYVYIYIYTYTHMCVYIH 57
>gi|115529486 ATPase, Cu++ transporting, alpha polypeptide [Homo
sapiens]
Length = 1500
Score = 25.8 bits (55), Expect = 7.8
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 39 ITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLH 76
I Q SF+ SL CI V ++IY++ + H LH
Sbjct: 647 IRQWRRSFLV--SLFFCIPVMGLMIYMMVMDHHFATLH 682
>gi|12965172 taste receptor, type 2, member 9 [Homo sapiens]
Length = 312
Score = 25.8 bits (55), Expect = 7.8
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 15/58 (25%)
Query: 19 KQPETAAALSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLH 76
K P T L+L LG + FI+ C++ FF+L++ L H LH
Sbjct: 173 KIPGTFKQLTLNLGVMVPFIL---------------CLISFFLLLFSLVRHTKQIRLH 215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,913,144
Number of Sequences: 37866
Number of extensions: 132086
Number of successful extensions: 690
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 664
Number of HSP's gapped (non-prelim): 28
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.