Guide to the Human Genome
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Name: ATP7A Sequence: fasta or formatted (1500aa) NCBI GI: 115529486
Description:

ATPase, Cu++ transporting, alpha polypeptide

Referenced in:

Iron, Copper, and Arsenic Metabolism
PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        106           2
 C cysteine            1.7         26           1
 D aspartate           4.4         66           3
 E glutamate           6.2         93           2
 F phenylalanine       2.9         43           2
 G glycine             6.1         92           2
 H histidine           2.3         34           2
 I isoleucine          8.7        130           2
 K lysine              5.8         87           2
 L leucine             9.0        135           2
 M methionine          2.9         44           2
 N asparagine          4.5         67           2
 P proline             4.1         62           2
 Q glutamine           3.6         54           2
 R arginine            3.2         48           2
 S serine              8.9        133           4
 T threonine           6.6         99           2
 V valine              9.4        141           3
 W tryptophan          0.6          9           1
 Y tyrosine            2.1         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, Cu++ transporting, alpha polypeptide 
ATP7B                 0.523   ATPase, Cu++ transporting, beta polypeptide isoform ...
ATP7B                 0.273   ATPase, Cu++ transporting, beta polypeptide isoform ...
ATP2C2                0.034   ATPase, Ca++ transporting, type 2C, member 2 
ATP1A2                0.026   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP2B1                0.023   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.023   plasma membrane calcium ATPase 1 isoform 1b 
ATP2C1                0.023   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.023   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.023   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.023   calcium-transporting ATPase 2C1 isoform 1a 
ATP2A3                0.021   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.021   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.021   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.021   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.021   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.021   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.021   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2A1                0.021   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.021   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP2A2                0.021   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.021   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2A2                0.021   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP2B3                0.019   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.019   plasma membrane calcium ATPase 3 isoform 3a 
ATP1A4                0.019   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP2B4                0.018   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.018   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B2                0.018   plasma membrane calcium ATPase 2 isoform 2 
ATP2B2                0.018   plasma membrane calcium ATPase 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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