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Search of human proteins with 31543204
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543204 proton-coupled folate transporter [Homo sapiens]
(459 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543204 proton-coupled folate transporter [Homo sapiens] 904 0.0
gi|32401447 solute carrier family 46, member 3 isoform a [Homo s... 223 3e-58
gi|209571533 solute carrier family 46, member 3 isoform b [Homo ... 223 3e-58
gi|223029454 solute carrier family 46, member 2 [Homo sapiens] 118 1e-26
gi|217416366 major facilitator superfamily domain containing 9 [... 52 1e-06
gi|39753965 hippocampus abundant transcript 1 [Homo sapiens] 51 2e-06
gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens] 49 7e-06
gi|225703102 major facilitator superfamily domain containing 10 ... 40 0.003
gi|225703104 major facilitator superfamily domain containing 10 ... 40 0.003
gi|31542327 solute carrier family 22, member 16 [Homo sapiens] 40 0.006
gi|166064062 tumor suppressing subtransferable candidate 5 [Homo... 37 0.029
gi|166064060 tumor suppressing subtransferable candidate 5 [Homo... 37 0.029
gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo s... 36 0.064
gi|24497499 solute carrier family 22 member 8 [Homo sapiens] 35 0.11
gi|24308167 SV2 related protein [Homo sapiens] 34 0.24
gi|154800443 solute carrier family 17 (sodium phosphate), member... 32 0.92
gi|24497480 solute carrier family 22 member 6 isoform d [Homo sa... 31 2.1
gi|24497478 solute carrier family 22 member 6 isoform c [Homo sa... 31 2.1
gi|24497476 solute carrier family 22 member 6 isoform b [Homo sa... 31 2.1
gi|20070188 solute carrier family 22 member 6 isoform a [Homo sa... 31 2.1
gi|4505971 solute carrier family 43, member 1 [Homo sapiens] 31 2.1
gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens] 31 2.7
gi|31881675 synaptotagmin XV isoform a [Homo sapiens] 31 2.7
gi|170650643 solute carrier family 22, member 23 isoform a [Homo... 30 3.5
gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens] 30 4.6
gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens] 30 4.6
gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens] 30 4.6
gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens] 30 4.6
gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens] 30 4.6
gi|169790964 hypothetical protein LOC51252 isoform A [Homo sapiens] 30 4.6
>gi|31543204 proton-coupled folate transporter [Homo sapiens]
Length = 459
Score = 904 bits (2336), Expect = 0.0
Identities = 459/459 (100%), Positives = 459/459 (100%)
Query: 1 MEGSASPPEKPRARPAAAVLCRGPVEPLVFLANFALVLQGPLTTQYLWHRFSADLGYNGT 60
MEGSASPPEKPRARPAAAVLCRGPVEPLVFLANFALVLQGPLTTQYLWHRFSADLGYNGT
Sbjct: 1 MEGSASPPEKPRARPAAAVLCRGPVEPLVFLANFALVLQGPLTTQYLWHRFSADLGYNGT 60
Query: 61 RQRGGCSNRSADPTMQEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLA 120
RQRGGCSNRSADPTMQEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLA
Sbjct: 61 RQRGGCSNRSADPTMQEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLA 120
Query: 121 SLGLLLQALVSVFVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFR 180
SLGLLLQALVSVFVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFR
Sbjct: 121 SLGLLLQALVSVFVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFR 180
Query: 181 MALLEASIGVAGMLASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKST 240
MALLEASIGVAGMLASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKST
Sbjct: 181 MALLEASIGVAGMLASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKST 240
Query: 241 RLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLCWD 300
RLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLCWD
Sbjct: 241 RLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLCWD 300
Query: 301 SKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFT 360
SKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFT
Sbjct: 301 SKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFT 360
Query: 361 GYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNF 420
GYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNF
Sbjct: 361 GYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNF 420
Query: 421 MKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP 459
MKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP
Sbjct: 421 MKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP 459
>gi|32401447 solute carrier family 46, member 3 isoform a [Homo
sapiens]
Length = 461
Score = 223 bits (568), Expect = 3e-58
Identities = 146/431 (33%), Positives = 221/431 (51%), Gaps = 22/431 (5%)
Query: 25 VEPLVFLANFALVLQGPLTTQYLWHRFSADLG---YNGTRQRGGCSNRSADPTM---QEV 78
VEP +FL+ FA+ L GPLTTQY++ R + G ++ C + P +EV
Sbjct: 6 VEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEV 65
Query: 79 ETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQA----LVSVFV 134
+ S + L M++ G + GL S+ +L + SD GR+ ++L+S+G L + L+ F
Sbjct: 66 QKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFA 125
Query: 135 VQLQLHVGYFVLGRILCALLGDFGGLLAASFASVAD-VSSSRSRTFRMALLEASIGVAGM 193
QL + +G A G++ A FA + D + +T R+A+++ +G+
Sbjct: 126 FPFQLLIASTFIG----AFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTG 181
Query: 194 LASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQ 253
L L G+++R G+ F + L +Y F G+ +KE S + T
Sbjct: 182 LTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNV-TMSCSEGFKN 240
Query: 254 LYVAPA---PEKSRKHLALYSLAIFVVITVHF---GAQDILTLYELSTPLCWDSKLIGYG 307
L+ S K L L +F VIT F G I LYEL +PLCW+ IGYG
Sbjct: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300
Query: 308 SAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLFL 367
SA +LTS L + L YC+ D +A IG+ + GM + AFA+ T +MF
Sbjct: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360
Query: 368 SLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNFMKGFPFL 427
++V V+R+ LSK+VR TEQG LF+ +A + +L +TA FN +Y AT+ + GF FL
Sbjct: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420
Query: 428 LGAGLLLIPAV 438
L AGLLL+PA+
Sbjct: 421 LSAGLLLLPAI 431
>gi|209571533 solute carrier family 46, member 3 isoform b [Homo
sapiens]
Length = 463
Score = 223 bits (568), Expect = 3e-58
Identities = 146/431 (33%), Positives = 221/431 (51%), Gaps = 22/431 (5%)
Query: 25 VEPLVFLANFALVLQGPLTTQYLWHRFSADLG---YNGTRQRGGCSNRSADPTM---QEV 78
VEP +FL+ FA+ L GPLTTQY++ R + G ++ C + P +EV
Sbjct: 6 VEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEV 65
Query: 79 ETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQA----LVSVFV 134
+ S + L M++ G + GL S+ +L + SD GR+ ++L+S+G L + L+ F
Sbjct: 66 QKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFA 125
Query: 135 VQLQLHVGYFVLGRILCALLGDFGGLLAASFASVAD-VSSSRSRTFRMALLEASIGVAGM 193
QL + +G A G++ A FA + D + +T R+A+++ +G+
Sbjct: 126 FPFQLLIASTFIG----AFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTG 181
Query: 194 LASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQ 253
L L G+++R G+ F + L +Y F G+ +KE S + T
Sbjct: 182 LTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNV-TMSCSEGFKN 240
Query: 254 LYVAPA---PEKSRKHLALYSLAIFVVITVHF---GAQDILTLYELSTPLCWDSKLIGYG 307
L+ S K L L +F VIT F G I LYEL +PLCW+ IGYG
Sbjct: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300
Query: 308 SAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLFL 367
SA +LTS L + L YC+ D +A IG+ + GM + AFA+ T +MF
Sbjct: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360
Query: 368 SLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNFMKGFPFL 427
++V V+R+ LSK+VR TEQG LF+ +A + +L +TA FN +Y AT+ + GF FL
Sbjct: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420
Query: 428 LGAGLLLIPAV 438
L AGLLL+PA+
Sbjct: 421 LSAGLLLLPAI 431
>gi|223029454 solute carrier family 46, member 2 [Homo sapiens]
Length = 475
Score = 118 bits (295), Expect = 1e-26
Identities = 105/426 (24%), Positives = 185/426 (43%), Gaps = 38/426 (8%)
Query: 64 GGCSNRSADPTM------QEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLL 117
GG SN SA P+ Q+ +++ + +Y V G L L S+ LG SD R+ +
Sbjct: 51 GGSSNHSASPSPRGALEDQQQRAISNFYIIYNLVVG-LSPLLSAYGLGWLSDRYHRKISI 109
Query: 118 VLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSR 177
++ LG LL L + V L V L L G F + A + SS R
Sbjct: 110 CMSLLGFLLSRLGLLLKVLLDWPVEVLYGAAALNGLFGGFSAFWSGVMALGSLGSSEGRR 169
Query: 178 TFRMALLEASIGVAGMLASLLGGHWLRAQ-GYANPFWLALALLIAMTLYAAFCFGETLKE 236
+ R+ L++ +G+AG S+ GH + G++ + A ++ +A LK
Sbjct: 170 SVRLILIDLMLGLAGFCGSMASGHLFKQMAGHSGQGLILTACSVSCASFALLYSLLVLKV 229
Query: 237 PKSTR---------------LFTFR--HHRSIVQLYVA---PAPEKSRKH---LALYSLA 273
P+S + T+R + Q Y P+P K++ H +AL +
Sbjct: 230 PESVAKPSQELPAVDTVSGTVGTYRTLDPDQLDQQYAVGHPPSPGKAKPHKTTIALLFVG 289
Query: 274 IFVVITVHFGAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAW 333
+ G D++ L+ L PL W+ +GYG AA + ++TS L + + C D
Sbjct: 290 AIIYDLAVVGTVDVIPLFVLREPLGWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTT 349
Query: 334 VAEIGLAFNILGMVVFAFATITPLMFTGYGLLFLSLVITPVIRAKLSKLVRETEQGALFS 393
+ IG+ G ++ AF T + + ++ +L+ IR+ +SKL++ + G +F
Sbjct: 350 MIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFV 409
Query: 394 AVACVNSLAMLTASGIFNSLYPATLNFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQ 453
+ +L + S ++N +Y T++ G F L + L + + I + + ++
Sbjct: 410 ILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAIIPISI-------VAYK 462
Query: 454 QFPQSP 459
Q P SP
Sbjct: 463 QVPLSP 468
>gi|217416366 major facilitator superfamily domain containing 9
[Homo sapiens]
Length = 474
Score = 51.6 bits (122), Expect = 1e-06
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
Query: 95 LVGLFSSTLLGAWSDSVGRRPLL----VLASLG-LLLQALVSVFVVQLQLHVGYFVLGRI 149
++ LFSSTL+G WSD VGRR L +L++LG LLL A +VF+ FVL R+
Sbjct: 90 ILQLFSSTLVGCWSDVVGRRSSLLACILLSALGYLLLGAATNVFL---------FVLARV 140
Query: 150 LCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGH 201
G F L+ S A ++DV + R + + GV +L ++GG+
Sbjct: 141 PA---GIFKHTLSISRALLSDVVPEKERPLVIGHFNTASGVGFILGPVVGGY 189
>gi|39753965 hippocampus abundant transcript 1 [Homo sapiens]
Length = 490
Score = 51.2 bits (121), Expect = 2e-06
Identities = 69/333 (20%), Positives = 127/333 (38%), Gaps = 29/333 (8%)
Query: 95 LVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCALL 154
L+ S+ L+GA SD GR+ LLL + + L ++ I ++
Sbjct: 83 LLSFLSAPLIGALSDVWGRKSF-------LLLTVFFTCAPIPLMKISPWWYFAVI--SVS 133
Query: 155 GDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPFWL 214
G F + FA VAD++ R+ L+ A+ + + + +G + R G + L
Sbjct: 134 GVFAVTFSVVFAYVADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVL 193
Query: 215 ALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAI 274
A A+ + + E+L P+ R ++ S Q P S K + S+ +
Sbjct: 194 ATAIALLDICFILVAVPESL--PEKMRPASWGAPISWEQ----ADPFASLKKVGQDSIVL 247
Query: 275 FVVITVHF------GAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYC 328
+ ITV G LY + + + L + + L LL
Sbjct: 248 LICITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRS 307
Query: 329 LADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLFLSLVITPVIRAKLSKLVRETEQ 388
+ + +GL F IL + + F + +M+ + +S + P + A +S+ +Q
Sbjct: 308 IGNKNTILLGLGFQILQLAWYGFGSEPWMMWAAGAVAAMSSITFPAVSALVSRTADADQQ 367
Query: 389 GALFSAVACVNSLAMLTASGIFNSLYPATLNFM 421
G + + + G+ N L PA F+
Sbjct: 368 GVVQGMITGIR--------GLCNGLGPALYGFI 392
>gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens]
Length = 506
Score = 49.3 bits (116), Expect = 7e-06
Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 40/356 (11%)
Query: 79 ETLTSHWTLYMN-----VGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVF 133
ET + H T MN V G L+ S+ L+GA SD GR+P L L + F
Sbjct: 72 ETFSQH-TFLMNGLIQGVKG-LLSFLSAPLIGALSDVWGRKPFL-------LGTVFFTCF 122
Query: 134 VVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGM 193
+ L ++ I ++ G F + FA VADV+ R+ + A+ A +
Sbjct: 123 PIPLMRISPWWYFAMI--SVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFA-ASL 179
Query: 194 LASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQ 253
++S G +L A Y + + +A ++A+ P+ R ++ S Q
Sbjct: 180 VSSPAIGAYLSAS-YGDSLVVLVATVVALLDICFILVAVPESLPEKMRPVSWGAQISWKQ 238
Query: 254 LYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLCWDSKLIGYGS----A 309
P S K + S + + ITV Y S+ + ++IG+GS A
Sbjct: 239 A----DPFASLKKVGKDSTVLLICITVFLSYLPEAGQY--SSFFLYLRQVIGFGSVKIAA 292
Query: 310 AQHLPYLTSLLA----LKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLL 365
+ + S++A L +L L + +GL F +L + + F + +M+ +
Sbjct: 293 FIAMVGILSIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVA 352
Query: 366 FLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNFM 421
+S + P I A +S+ +QG + + G+ N L PA F+
Sbjct: 353 AMSSITFPAISALVSRNAESDQQGVAQGIITGIR--------GLCNGLGPALYGFI 400
>gi|225703102 major facilitator superfamily domain containing 10
[Homo sapiens]
Length = 455
Score = 40.4 bits (93), Expect = 0.003
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 92 GGFLVGLFS------STLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFV 145
GG + FS + L GA SD +GRRP+++L +G+ S V F+
Sbjct: 89 GGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGV----ATSYAVWATSRSFAAFL 144
Query: 146 LGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205
R++ G G ++ S A VAD+ S +R+ MA+ IGVA L LG +
Sbjct: 145 ASRLIG---GISKGNVSLSTAIVADLGSPLARSQGMAV----IGVAFSLGFTLGPMLGAS 197
Query: 206 QGYANPFWLALALLIAMTLYAAFCF 230
W AL L A L FCF
Sbjct: 198 LPLEMAPWFAL-LFAASDLLFIFCF 221
>gi|225703104 major facilitator superfamily domain containing 10
[Homo sapiens]
Length = 455
Score = 40.4 bits (93), Expect = 0.003
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 92 GGFLVGLFS------STLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFV 145
GG + FS + L GA SD +GRRP+++L +G+ S V F+
Sbjct: 89 GGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGV----ATSYAVWATSRSFAAFL 144
Query: 146 LGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205
R++ G G ++ S A VAD+ S +R+ MA+ IGVA L LG +
Sbjct: 145 ASRLIG---GISKGNVSLSTAIVADLGSPLARSQGMAV----IGVAFSLGFTLGPMLGAS 197
Query: 206 QGYANPFWLALALLIAMTLYAAFCF 230
W AL L A L FCF
Sbjct: 198 LPLEMAPWFAL-LFAASDLLFIFCF 221
>gi|31542327 solute carrier family 22, member 16 [Homo sapiens]
Length = 577
Score = 39.7 bits (91), Expect = 0.006
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 14/137 (10%)
Query: 94 FLVG-LFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCA 152
F+ G L S G +SD +GRR +L S + L + + F V F+ R A
Sbjct: 161 FMFGVLLGSVTFGYFSDRLGRRVVLWATSSSMFLFGIAAAFAVDYYT----FMAARFFLA 216
Query: 153 LLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPF 212
++ G L F V + +SRT+ L + V +L +L G +
Sbjct: 217 MVA--SGYLVVGFVYVMEFIGMKSRTWASVHLHSFFAVGTLLVALTG-------YLVRTW 267
Query: 213 WLALALLIAMTLYAAFC 229
WL +L +T+ C
Sbjct: 268 WLYQMILSTVTVPFILC 284
>gi|166064062 tumor suppressing subtransferable candidate 5 [Homo
sapiens]
Length = 424
Score = 37.4 bits (85), Expect = 0.029
Identities = 74/348 (21%), Positives = 124/348 (35%), Gaps = 43/348 (12%)
Query: 88 YMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLG 147
Y+ ++ L + G ++D G R L L+ L L L+ L Y +
Sbjct: 63 YLQTTFGVLQLLGGPVFGRFADQRGARAALTLSFLAALALYLLLAAASSPALPGVYLLFA 122
Query: 148 RILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQG 207
L G L A+ + D+S+ R + L GV +L SLLGG + A G
Sbjct: 123 S---RLPGALMHTLPAAQMVITDLSAPEERPAALGRLGLCFGVGVILGSLLGGTLVSAYG 179
Query: 208 YANPFWLALALLIAMTLYAAFCFGETLKEPKS-----------TRLFTFRHHRSIVQLYV 256
P LA + + + C + K K+ +F + S+++L
Sbjct: 180 IQCPAILAALATLLGAVLSFTCIPASTKGAKTDAQAPLPGGPRASVFDLKAIASLLRLPD 239
Query: 257 AP----APEKSRKHLALYSLAIFVVITVHF------GAQDILTLYELSTPLCWDSKLIGY 306
P S L+ + +F +I++ F A +++ + L + +IG
Sbjct: 240 VPRIFLVKVASNCPTGLF-MVMFSIISMDFFQLEAAQAGYLMSFFGL-LQMVTQGLVIGQ 297
Query: 307 GSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLF 366
S+ L L + LA AW++ VF F + P GL+F
Sbjct: 298 LSSHFSEEVLLRASVLVFIVVGLAMAWMSS-----------VFHFCLLVP------GLVF 340
Query: 367 LSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLY 414
+ V + L K V ++ G + A V L + LY
Sbjct: 341 SLCTLNVVTDSMLIKAVSTSDTGTMLGLCASVQPLLRTLGPTVGGLLY 388
>gi|166064060 tumor suppressing subtransferable candidate 5 [Homo
sapiens]
Length = 424
Score = 37.4 bits (85), Expect = 0.029
Identities = 74/348 (21%), Positives = 124/348 (35%), Gaps = 43/348 (12%)
Query: 88 YMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLG 147
Y+ ++ L + G ++D G R L L+ L L L+ L Y +
Sbjct: 63 YLQTTFGVLQLLGGPVFGRFADQRGARAALTLSFLAALALYLLLAAASSPALPGVYLLFA 122
Query: 148 RILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQG 207
L G L A+ + D+S+ R + L GV +L SLLGG + A G
Sbjct: 123 S---RLPGALMHTLPAAQMVITDLSAPEERPAALGRLGLCFGVGVILGSLLGGTLVSAYG 179
Query: 208 YANPFWLALALLIAMTLYAAFCFGETLKEPKS-----------TRLFTFRHHRSIVQLYV 256
P LA + + + C + K K+ +F + S+++L
Sbjct: 180 IQCPAILAALATLLGAVLSFTCIPASTKGAKTDAQAPLPGGPRASVFDLKAIASLLRLPD 239
Query: 257 AP----APEKSRKHLALYSLAIFVVITVHF------GAQDILTLYELSTPLCWDSKLIGY 306
P S L+ + +F +I++ F A +++ + L + +IG
Sbjct: 240 VPRIFLVKVASNCPTGLF-MVMFSIISMDFFQLEAAQAGYLMSFFGL-LQMVTQGLVIGQ 297
Query: 307 GSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLF 366
S+ L L + LA AW++ VF F + P GL+F
Sbjct: 298 LSSHFSEEVLLRASVLVFIVVGLAMAWMSS-----------VFHFCLLVP------GLVF 340
Query: 367 LSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLY 414
+ V + L K V ++ G + A V L + LY
Sbjct: 341 SLCTLNVVTDSMLIKAVSTSDTGTMLGLCASVQPLLRTLGPTVGGLLY 388
>gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo
sapiens]
Length = 348
Score = 36.2 bits (82), Expect = 0.064
Identities = 57/226 (25%), Positives = 81/226 (35%), Gaps = 32/226 (14%)
Query: 85 WTLYMNVGG----FLVG--LFSSTLLGAWSDSVGRRPL---LVLASLGLLLQALVSVFVV 135
W Y+ FL+G L + L+ R+PL LV S G L + SVF V
Sbjct: 32 WAFYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFSVFPV 91
Query: 136 QLQLHVGYFVLGRILCAL---LGDFGGLLAA-SFASVA------------DVSSSRSRTF 179
+ GYFV GR +CAL LG GL+ S A +A + S
Sbjct: 92 FVASCNGYFVFGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGNFRFSSKHAL 151
Query: 180 RMALLEASIGVAGMLASLLGGHWLR-----AQGYANPFWLALALLIAMTLYAAFCFGETL 234
+ L +IG+ + G W R Q P W + Y F F
Sbjct: 152 TVVLATWTIGIGVSIPPFFG--WSRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLFIFCF 209
Query: 235 KEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITV 280
P S F++ ++ A E + A ++ VV+ V
Sbjct: 210 IVPLSLICFSYTQLLRALKAVAAQQQESATTQKAEREVSRMVVVMV 255
>gi|24497499 solute carrier family 22 member 8 [Homo sapiens]
Length = 542
Score = 35.4 bits (80), Expect = 0.11
Identities = 86/369 (23%), Positives = 130/369 (35%), Gaps = 66/369 (17%)
Query: 79 ETLTSHWTLYMNVGG--------FLVG-LFSSTLLGAWSDSVGRRPLLVLASLGLLLQAL 129
+++ + W L N F+ G L +LG SD GRRP+L + L L
Sbjct: 106 DSIVTEWDLVCNSNKLKEMAQSIFMAGILIGGLVLGDLSDRFGRRPILTCSYLLLAASGS 165
Query: 130 VSVFVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIG 189
+ F +++ + R LC G G L+ +V V T A++ ++G
Sbjct: 166 GAAFSPTFPIYMVF----RFLCG-FGISGITLSTVILNVEWVP-----TRMRAIMSTALG 215
Query: 190 VAGMLASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHR 249
+ L YA P W L L +++ + F + P+S R
Sbjct: 216 YCYTFGQFI----LPGLAYAIPQWRWLQLTVSIPFFVFFL--SSWWTPESIRWLVL---- 265
Query: 250 SIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLCWDSKLIGYGSA 309
+ AL L V + L+L EL L K I A
Sbjct: 266 ------------SGKSSKALKILRRVAVFNGKKEEGERLSLEELKLNL---QKEISLAKA 310
Query: 310 AQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFAT---ITPLMFTGYGLLF 366
L + L+ + +CL+ AW A G A+ L M V F I ++F G +
Sbjct: 311 KYTASDLFRIPMLRRMTFCLSLAWFA-TGFAYYSLAMGVEEFGVNLYILQIIFGGVDVPA 369
Query: 367 LSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSL--YPATLNFMKGF 424
+ I LS L R T Q A A+L A G +L P L ++
Sbjct: 370 KFITI-----LSLSYLGRHTTQAA-----------ALLLAGGAILALTFVPLDLQTVRTV 413
Query: 425 PFLLGAGLL 433
+ G G L
Sbjct: 414 LAVFGKGCL 422
>gi|24308167 SV2 related protein [Homo sapiens]
Length = 548
Score = 34.3 bits (77), Expect = 0.24
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 85 WTLYMNVGGFLVGLFSS-TLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGY 143
W + + VG+ SS TL G SD GR+ L ++ L L ++S F V
Sbjct: 120 WQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFA-----PVYS 174
Query: 144 FVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWL 203
++L +L L+G G + S A+ ++R + L+E + + +L +
Sbjct: 175 WIL--VLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVM 232
Query: 204 RAQGYANPFWLALALLIAMTLYAAFCF 230
+ G+ WL + + + L+A CF
Sbjct: 233 PSLGWR---WLLILSAVPLLLFAVLCF 256
>gi|154800443 solute carrier family 17 (sodium phosphate), member 1
[Homo sapiens]
Length = 467
Score = 32.3 bits (72), Expect = 0.92
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 129 LVSVFVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASI 188
L VF+ L + YF + L G GGL+A++ + S F+ +L A+I
Sbjct: 380 LGGVFINGLDIAPRYFGFIKACSTLTGMIGGLIASTLTGLILKQDPESAWFKTFILMAAI 439
Query: 189 GVAGMLASLL 198
V G++ L+
Sbjct: 440 NVTGLIFYLI 449
>gi|24497480 solute carrier family 22 member 6 isoform d [Homo
sapiens]
Length = 519
Score = 31.2 bits (69), Expect = 2.1
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 94 FLVG-LFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCA 152
++VG L + + G +D +GRR +L+L L + + F ++ + +L
Sbjct: 141 YMVGVLLGAMVFGYLADRLGRRKVLILNYLQTAVSGTCAAFAPNFPIYCAFRLLS----- 195
Query: 153 LLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPF 212
G LA + ++ A + IG L L L YA P
Sbjct: 196 -----GMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFL----LAGVAYAVPH 246
Query: 213 WLALALLIAMTLYAAFCF 230
W L LL++ +A F +
Sbjct: 247 WRHLQLLVSAPFFAFFIY 264
>gi|24497478 solute carrier family 22 member 6 isoform c [Homo
sapiens]
Length = 506
Score = 31.2 bits (69), Expect = 2.1
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 94 FLVG-LFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCA 152
++VG L + + G +D +GRR +L+L L + + F ++ + +L
Sbjct: 141 YMVGVLLGAMVFGYLADRLGRRKVLILNYLQTAVSGTCAAFAPNFPIYCAFRLLS----- 195
Query: 153 LLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPF 212
G LA + ++ A + IG L L L YA P
Sbjct: 196 -----GMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFL----LAGVAYAVPH 246
Query: 213 WLALALLIAMTLYAAFCF 230
W L LL++ +A F +
Sbjct: 247 WRHLQLLVSAPFFAFFIY 264
>gi|24497476 solute carrier family 22 member 6 isoform b [Homo
sapiens]
Length = 550
Score = 31.2 bits (69), Expect = 2.1
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 94 FLVG-LFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCA 152
++VG L + + G +D +GRR +L+L L + + F ++ + +L
Sbjct: 141 YMVGVLLGAMVFGYLADRLGRRKVLILNYLQTAVSGTCAAFAPNFPIYCAFRLLS----- 195
Query: 153 LLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPF 212
G LA + ++ A + IG L L L YA P
Sbjct: 196 -----GMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFL----LAGVAYAVPH 246
Query: 213 WLALALLIAMTLYAAFCF 230
W L LL++ +A F +
Sbjct: 247 WRHLQLLVSAPFFAFFIY 264
>gi|20070188 solute carrier family 22 member 6 isoform a [Homo
sapiens]
Length = 563
Score = 31.2 bits (69), Expect = 2.1
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 94 FLVG-LFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQLQLHVGYFVLGRILCA 152
++VG L + + G +D +GRR +L+L L + + F ++ + +L
Sbjct: 141 YMVGVLLGAMVFGYLADRLGRRKVLILNYLQTAVSGTCAAFAPNFPIYCAFRLLS----- 195
Query: 153 LLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRAQGYANPF 212
G LA + ++ A + IG L L L YA P
Sbjct: 196 -----GMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFL----LAGVAYAVPH 246
Query: 213 WLALALLIAMTLYAAFCF 230
W L LL++ +A F +
Sbjct: 247 WRHLQLLVSAPFFAFFIY 264
>gi|4505971 solute carrier family 43, member 1 [Homo sapiens]
Length = 559
Score = 31.2 bits (69), Expect = 2.1
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 353 TITPLMFTGYG---------LLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAM 403
T+T L+ G+G L F++ V+ ++R G+L++AV N
Sbjct: 424 TLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSAC-----GSLYAAVFPSNHFGT 478
Query: 404 LTA-----SGIF----NSLYPATLNFMKGFPFLLGAGLLLIPAVLIGML 443
LT S +F L+ A + +KG PF + GLLL L+G L
Sbjct: 479 LTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFS--LLGFL 525
>gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens]
Length = 402
Score = 30.8 bits (68), Expect = 2.7
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
Query: 308 SAAQHLPYLTSLLALKLLQYCLADAWV--------AEIGLAFNILGMVVFAFATITPLMF 359
SAA L ++ SLLA L + + A V A G A + LG + F L+
Sbjct: 69 SAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRAPAGGACHFLGGCMVFFGLCPLLLG 128
Query: 360 TGYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLN 419
G + V P++ A + R A +AVA +L L G + YP T
Sbjct: 129 CGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWC 188
Query: 420 FM 421
F+
Sbjct: 189 FI 190
>gi|31881675 synaptotagmin XV isoform a [Homo sapiens]
Length = 421
Score = 30.8 bits (68), Expect = 2.7
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 106 AWSDSVGRRPLLVLASLGLLLQ---ALVSVFVVQLQLHVGYFVLGRILCALLGDFGGLLA 162
+++D + R ++VL + GL LQ +VSVFV ++ FV + A+LG +
Sbjct: 287 SYNDYLSRLTVVVLRAKGLRLQEDRGIVSVFVKVSLMNHNKFVKCKKTSAVLGSINPVYN 346
Query: 163 ASFASVADVSSSRSRTFRMALLEASIG-VAGMLASLLGGHWLRAQGYANPFW 213
+F+ AD + + + + +++ G + L ++ G ++ +G W
Sbjct: 347 ETFSFKADATELDTASLSLTVVQNMEGDKSQQLGRVVVGPYMYTRGRELEHW 398
>gi|170650643 solute carrier family 22, member 23 isoform a [Homo
sapiens]
Length = 686
Score = 30.4 bits (67), Expect = 3.5
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 85 WTLYMNVGGFLVGL-FSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVFVVQ------L 137
W +++ LVGL F + G +D VGRRP+L+ + + +L+ L V L
Sbjct: 227 WKVHIAKFSLLVGLIFGYLITGCIADWVGRRPVLLFSIIFILIFGLTVALSVNVTMFSTL 286
Query: 138 QLHVGYFVLGRIL 150
+ G+ + G IL
Sbjct: 287 RFFEGFCLAGIIL 299
>gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 30.0 bits (66), Expect = 4.6
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 118 VLASL-GLLLQALVSVFVVQLQLH-VGYFVLGRILCALLGDFGGLLAASFASVADVSSSR 175
+L SL +LL L++ +V++QL + +FV+ I L+ FG +L S +A + +
Sbjct: 112 ILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGLLPAS 171
Query: 176 SRTFRMALLEASIGVAGMLASL 197
A + + G+AG AS+
Sbjct: 172 ----YTAPIMSGQGLAGFFASV 189
>gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 30.0 bits (66), Expect = 4.6
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 118 VLASL-GLLLQALVSVFVVQLQLH-VGYFVLGRILCALLGDFGGLLAASFASVADVSSSR 175
+L SL +LL L++ +V++QL + +FV+ I L+ FG +L S +A + +
Sbjct: 112 ILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGLLPAS 171
Query: 176 SRTFRMALLEASIGVAGMLASL 197
A + + G+AG AS+
Sbjct: 172 ----YTAPIMSGQGLAGFFASV 189
>gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 30.0 bits (66), Expect = 4.6
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 118 VLASL-GLLLQALVSVFVVQLQLH-VGYFVLGRILCALLGDFGGLLAASFASVADVSSSR 175
+L SL +LL L++ +V++QL + +FV+ I L+ FG +L S +A + +
Sbjct: 112 ILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGLLPAS 171
Query: 176 SRTFRMALLEASIGVAGMLASL 197
A + + G+AG AS+
Sbjct: 172 ----YTAPIMSGQGLAGFFASV 189
>gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 30.0 bits (66), Expect = 4.6
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 118 VLASL-GLLLQALVSVFVVQLQLH-VGYFVLGRILCALLGDFGGLLAASFASVADVSSSR 175
+L SL +LL L++ +V++QL + +FV+ I L+ FG +L S +A + +
Sbjct: 112 ILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGLLPAS 171
Query: 176 SRTFRMALLEASIGVAGMLASL 197
A + + G+AG AS+
Sbjct: 172 ----YTAPIMSGQGLAGFFASV 189
>gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 30.0 bits (66), Expect = 4.6
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 118 VLASL-GLLLQALVSVFVVQLQLH-VGYFVLGRILCALLGDFGGLLAASFASVADVSSSR 175
+L SL +LL L++ +V++QL + +FV+ I L+ FG +L S +A + +
Sbjct: 112 ILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGLLPAS 171
Query: 176 SRTFRMALLEASIGVAGMLASL 197
A + + G+AG AS+
Sbjct: 172 ----YTAPIMSGQGLAGFFASV 189
>gi|169790964 hypothetical protein LOC51252 isoform A [Homo sapiens]
Length = 647
Score = 30.0 bits (66), Expect = 4.6
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 234 LKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYEL 293
L+E T + HH +++ L V P+ + + L S VVI G Q++L L++
Sbjct: 457 LQELCCTLSWVSDHHHNLLAL-VQFFPDMTSRSRRLRSQLSLVVIARMLGQQEMLPLWQE 515
Query: 294 STPLCWDSKLIGYGSAAQHLPYLTSL 319
T L S+L+G + YL S+
Sbjct: 516 KTQLSSLSRLLGLMRPSSLRQYLDSV 541
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,883,658
Number of Sequences: 37866
Number of extensions: 640648
Number of successful extensions: 2016
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1987
Number of HSP's gapped (non-prelim): 34
length of query: 459
length of database: 18,247,518
effective HSP length: 106
effective length of query: 353
effective length of database: 14,233,722
effective search space: 5024503866
effective search space used: 5024503866
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.