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Search of human proteins with 31543179
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543179 hypothetical protein LOC78995 [Homo sapiens]
(647 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543179 hypothetical protein LOC78995 [Homo sapiens] 1296 0.0
gi|119943102 CREB binding protein isoform b [Homo sapiens] 49 1e-05
gi|119943104 CREB binding protein isoform a [Homo sapiens] 49 1e-05
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 47 7e-05
gi|50345997 E1A binding protein p300 [Homo sapiens] 45 2e-04
gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens] 44 6e-04
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens] 43 0.001
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 42 0.001
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 42 0.001
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 42 0.001
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 42 0.001
gi|163965366 nascent polypeptide-associated complex alpha subuni... 42 0.001
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens] 42 0.002
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens] 42 0.002
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens] 42 0.002
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens] 42 0.002
gi|32171215 CREB regulated transcription coactivator 2 [Homo sap... 42 0.002
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 42 0.002
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 42 0.002
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 42 0.002
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens] 42 0.002
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens] 42 0.002
gi|151301154 mucin 6, gastric [Homo sapiens] 42 0.002
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 41 0.004
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 41 0.004
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 41 0.004
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 40 0.005
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.007
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 40 0.009
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 39 0.011
>gi|31543179 hypothetical protein LOC78995 [Homo sapiens]
Length = 647
Score = 1296 bits (3353), Expect = 0.0
Identities = 647/647 (100%), Positives = 647/647 (100%)
Query: 1 MACSLQKLFAVEEEFEDEDFLSAVEDAENRFTGSLPVNAGRLRPVSSRPQETVQAQSSRL 60
MACSLQKLFAVEEEFEDEDFLSAVEDAENRFTGSLPVNAGRLRPVSSRPQETVQAQSSRL
Sbjct: 1 MACSLQKLFAVEEEFEDEDFLSAVEDAENRFTGSLPVNAGRLRPVSSRPQETVQAQSSRL 60
Query: 61 LLLHPTAPSEALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRVTVT 120
LLLHPTAPSEALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRVTVT
Sbjct: 61 LLLHPTAPSEALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRVTVT 120
Query: 121 EVLRETARPQSSALHPLLTFESQQQQVGGFEGPEQDEFDKVLASMELEEPGMELECGVSS 180
EVLRETARPQSSALHPLLTFESQQQQVGGFEGPEQDEFDKVLASMELEEPGMELECGVSS
Sbjct: 121 EVLRETARPQSSALHPLLTFESQQQQVGGFEGPEQDEFDKVLASMELEEPGMELECGVSS 180
Query: 181 EAIPILPAQQREGSVLAKKARVVDLSGSCQKGPVPAIHKAGIMSAQDESLDPVIQCRTPR 240
EAIPILPAQQREGSVLAKKARVVDLSGSCQKGPVPAIHKAGIMSAQDESLDPVIQCRTPR
Sbjct: 181 EAIPILPAQQREGSVLAKKARVVDLSGSCQKGPVPAIHKAGIMSAQDESLDPVIQCRTPR 240
Query: 241 PPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQP 300
PPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQP
Sbjct: 241 PPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQP 300
Query: 301 FQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGTPKGPQ 360
FQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGTPKGPQ
Sbjct: 301 FQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGTPKGPQ 360
Query: 361 GALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVS 420
GALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVS
Sbjct: 361 GALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVS 420
Query: 421 APQTPTHGALAKFQTEIVASSQASVEEDFGRGPWLTMKSTLGLDERDPSCFLCTYSIVMV 480
APQTPTHGALAKFQTEIVASSQASVEEDFGRGPWLTMKSTLGLDERDPSCFLCTYSIVMV
Sbjct: 421 APQTPTHGALAKFQTEIVASSQASVEEDFGRGPWLTMKSTLGLDERDPSCFLCTYSIVMV 480
Query: 481 LRKQAALKQLPRNKVPNMAVMIKSLTRSTMDASVVFKDPTGEMQGTVHRLLLETCQNELK 540
LRKQAALKQLPRNKVPNMAVMIKSLTRSTMDASVVFKDPTGEMQGTVHRLLLETCQNELK
Sbjct: 481 LRKQAALKQLPRNKVPNMAVMIKSLTRSTMDASVVFKDPTGEMQGTVHRLLLETCQNELK 540
Query: 541 PGSVLLLKQIGVFSPSLRNHYLNVTPNNLVHIYSPDSGDGSFLKPSQPFPKDSGSFQHDV 600
PGSVLLLKQIGVFSPSLRNHYLNVTPNNLVHIYSPDSGDGSFLKPSQPFPKDSGSFQHDV
Sbjct: 541 PGSVLLLKQIGVFSPSLRNHYLNVTPNNLVHIYSPDSGDGSFLKPSQPFPKDSGSFQHDV 600
Query: 601 AAKPEEGFRTAQNLEAEASPEEELPEADDLDGLLSELPEDFFCGTSS 647
AAKPEEGFRTAQNLEAEASPEEELPEADDLDGLLSELPEDFFCGTSS
Sbjct: 601 AAKPEEGFRTAQNLEAEASPEEELPEADDLDGLLSELPEDFFCGTSS 647
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 48.9 bits (115), Expect = 1e-05
Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 36/205 (17%)
Query: 273 SPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSS 332
+P+ L P QA++ + P + P P P+S +G L P TP +
Sbjct: 793 NPLNMLGP-QASQ--LPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGM---TPPQ--- 843
Query: 333 GLFPRIPLQPQAPVSSIG-SPVGTPKGPQGALQ---TPIVTNHLVQLVTAASRTPQQPTH 388
P P QP PVSS G +P TP A Q TP V VT +TP QP
Sbjct: 844 ---PAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPS 900
Query: 389 PSTRAKTRRFPGPAGILPHQQSGRSLEDIMVSAPQTPTHGALAKFQTEI-----VASSQA 443
+T +++ P P P P TP A A + VAS++
Sbjct: 901 VATPQSSQQQPTPVHAQP---------------PGTPLSQAAASIDNRVPTPSSVASAET 945
Query: 444 SVEEDFGRGPWLTMKSTLGLDERDP 468
+ ++ P L MK+ ++ +P
Sbjct: 946 NSQQPGPDVPVLEMKTETQAEDTEP 970
Score = 30.4 bits (67), Expect = 5.3
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 63 LHPTAP--SEALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTS 107
LHPT P S A G+P L P TP + P+ P PVS+S
Sbjct: 815 LHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPT----QPSTPVSSS 857
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 48.9 bits (115), Expect = 1e-05
Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 36/205 (17%)
Query: 273 SPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSS 332
+P+ L P QA++ + P + P P P+S +G L P TP +
Sbjct: 831 NPLNMLGP-QASQ--LPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGM---TPPQ--- 881
Query: 333 GLFPRIPLQPQAPVSSIG-SPVGTPKGPQGALQ---TPIVTNHLVQLVTAASRTPQQPTH 388
P P QP PVSS G +P TP A Q TP V VT +TP QP
Sbjct: 882 ---PAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPS 938
Query: 389 PSTRAKTRRFPGPAGILPHQQSGRSLEDIMVSAPQTPTHGALAKFQTEI-----VASSQA 443
+T +++ P P P P TP A A + VAS++
Sbjct: 939 VATPQSSQQQPTPVHAQP---------------PGTPLSQAAASIDNRVPTPSSVASAET 983
Query: 444 SVEEDFGRGPWLTMKSTLGLDERDP 468
+ ++ P L MK+ ++ +P
Sbjct: 984 NSQQPGPDVPVLEMKTETQAEDTEP 1008
Score = 30.4 bits (67), Expect = 5.3
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 63 LHPTAP--SEALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTS 107
LHPT P S A G+P L P TP + P+ P PVS+S
Sbjct: 853 LHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPT----QPSTPVSSS 895
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 46.6 bits (109), Expect = 7e-05
Identities = 61/241 (25%), Positives = 79/241 (32%), Gaps = 18/241 (7%)
Query: 239 PRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQA-ARGTIQSSPQNRFP 297
P P PG L L+ Q E P A + L T P P
Sbjct: 202 PTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLSTPVPPTRDEGPSTSVP 261
Query: 298 CQPFQSPSSWLSGKAH------LPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGS 351
P + PS+ + A L R SS S P + GL + P + GS
Sbjct: 262 ATPGEGPSTSVLPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQ-----PTAGEGS 316
Query: 352 PVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSG 411
P P G L T + +L T+ TP + PST G + +P S
Sbjct: 317 STSVPPTPGGGLSTSVPPTATEELSTSVPPTPGEG--PSTSVLPIPGEGLSTSVPPTASD 374
Query: 412 RSLEDIMVSAPQTPTHGALAKFQTEIVASSQASVEEDFGRGPWLTMKSTLGLDERDPSCF 471
S S P TP GA Q +SV + G GP S+ +D C
Sbjct: 375 GS----DTSVPPTPGEGASTLVQPTAPDGPGSSVLPNPGEGPSTLFSSSASVDRNPSKCS 430
Query: 472 L 472
L
Sbjct: 431 L 431
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 45.4 bits (106), Expect = 2e-04
Identities = 82/319 (25%), Positives = 116/319 (36%), Gaps = 47/319 (14%)
Query: 130 QSSALHPLLTFESQQQQVGGFEGPEQDEFDKVLASMELEEPGME---LECGVSSEAIPIL 186
Q AL+P + + + QQ Q +F L + GM + SS P+
Sbjct: 741 QPGALNPPMGYGPRMQQPSN-----QGQF---LPQTQFPSQGMNVTNIPLAPSSGQAPVS 792
Query: 187 PAQQREGSVLAKKARVVDLS-GS---CQKGPVPAIHKAGIMSAQDESLDPVIQCRTPRPP 242
AQ S + S GS C + P PA+H+ S PV RTP P
Sbjct: 793 QAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQ--------NSPSPV-PSRTPTPH 843
Query: 243 LRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQPFQ 302
P ++G P A T+P P QAL P T P + P Q
Sbjct: 844 HTPPSIG-AQQPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPT---PPTTQLPQQV-- 897
Query: 303 SPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVS----SIGSPVGTPKG 358
PS + A P+ + P S ST + + P +P QP P+S SI V P
Sbjct: 898 QPSLPAAPSADQPQQQ-PRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSIEGQVSNP-- 954
Query: 359 PQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIM 418
P ++ V A + P Q + + + P PA P S +ED
Sbjct: 955 -------PSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQ-PEPADTQPEDISESKVEDCK 1006
Query: 419 VSAPQTPTHGALAKFQTEI 437
+ + T T + +TEI
Sbjct: 1007 MES--TETEERSTELKTEI 1023
>gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens]
Length = 1313
Score = 43.5 bits (101), Expect = 6e-04
Identities = 74/278 (26%), Positives = 106/278 (38%), Gaps = 37/278 (13%)
Query: 115 RRVTVTEVLRETARPQSSALHPLLTFESQQQQVGGFEGPEQDEFD--------------K 160
RR T T +T P SS+ H L +Q V P+ K
Sbjct: 621 RRQTSTSAGPDTIMPSSSSRHGLGVSTAQPALVPKVISPKSRPVKPKFYLSSTTTASTKK 680
Query: 161 VLASMELEEPGMELECGVSSEAIPI--LPAQQREGSV----LAKKARVVDLSGSCQKGPV 214
+L+S ELE G E +S P +PAQQ G++ L K ++ S S P+
Sbjct: 681 MLSSKELEPLG-ESPHTLSMPTYPKAKIPAQQDSGTLAQPTLRTKPTILVPSNSGTLLPL 739
Query: 215 PAIHKAGIMSAQDESLDPVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSP 274
K G +S Q+ + P RT PP++PG T V LH + P
Sbjct: 740 ----KPGSLSHQNPDILPT-NSRTQVPPVKPGIPASPKADTVKCVTP--LHSKPGAPSHP 792
Query: 275 VQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGL 334
QA +G PQ+R Q P L + +P P+T N+
Sbjct: 793 QLGALTSQAPKGL----PQSRPGVSTLQVPKYPLHTRPRVPAPKTRNNMPHLGPGILLSK 848
Query: 335 FPRI--PLQPQAPVSSIGSPV--GTPKGPQGAL-QTPI 367
P+I L+P AP I + + P+ P + QTP+
Sbjct: 849 TPKILLSLKPSAPPHQISTSISLSKPETPNPHMPQTPL 886
>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
Length = 1073
Score = 42.7 bits (99), Expect = 0.001
Identities = 86/379 (22%), Positives = 140/379 (36%), Gaps = 46/379 (12%)
Query: 92 RPSCIGAAPLRPVSTSSSW---IGNQRRVTVTEVLRETARPQSSALH-PLLTFESQQQQV 147
R S G++ VST S + +G+ T V+++ + Q P L + QQ
Sbjct: 462 RESTSGSSVSSSVSTLSHYTESVGSGEMGAPTVVVQQQQQQQQQQQQQPALQGVTLQQMD 521
Query: 148 GGFEGPEQDEFDKVLASMELEEPGMELECGVSSEAIPILPAQQREGSVLAKKA-RVVDLS 206
G GP+ P + + +S I + Q +E S K+ + V L
Sbjct: 522 FGSTGPQSI-------------PAVSIPQSISQSQISQVQLQSQELSYQQKQGLQPVPLQ 568
Query: 207 G--SCQKGPVPA-IHKAGIMSA--QDESLDPVIQCRTPRPPLRPGAVGHLPVPTALTVPT 261
S G P+ ++ G+ SA Q S+ + Q + P P P+P A P
Sbjct: 569 ATMSAATGIQPSPVNVVGVTSALGQQPSISSLAQPQLPYSQAAPPV--QTPLPGA--PPP 624
Query: 262 QQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPN 321
QQL Q Q + Q A G ++S QN P + L +P +
Sbjct: 625 QQL------QYGQQQPMVSTQMAPGHVKSVTQN--PASEYVQQQPILQTAMSSGQPSSAG 676
Query: 322 SSCST---PSRTSSGLFPRIPLQPQA-PVSSIGSPVGTPKGPQGALQTPIVTNHLVQLVT 377
T P G+ ++P+QP A P G+ V P G A + + T + +
Sbjct: 677 VGAGTTVIPVAQPQGI--QLPVQPTAVPAQPAGASV-QPVGQAPAAVSAVPTGSQIANIG 733
Query: 378 AASRTPQQPTHPSTRAKT----RRFPGPAGILPHQQSGRSLEDIMVSAPQTPTHGALAKF 433
+ P PST+ + P + ++P Q+G + + SAP P +A
Sbjct: 734 QQANIPTAVQQPSTQVPPSVIQQGAPPSSQVVPPAQTGIIHQGVQTSAPSLPQQLVIASQ 793
Query: 434 QTEIVASSQASVEEDFGRG 452
+ + Q E +G
Sbjct: 794 SSLLTVPPQPQGVEPVAQG 812
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 232 PVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQ-RSPVQALQPLQAARGTIQS 290
PV+ TP PPL P LP P++ P CP S A PL T+
Sbjct: 777 PVLTVATPPPPLLPTV--PLPAPSSSASP------HPCPSPLSNATAQSPLPILSPTVSP 828
Query: 291 SPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIG 350
SP P +P S +S G L + +SS S+ S +SS P P P+S+I
Sbjct: 829 SPSPIPPVEPLMSAAS--PGPPTLSSSSSSSSSSSSFSSSSSSSSPSPP-----PLSAIS 881
Query: 351 SPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQP 386
S V + + +L P+++ +L + ++P
Sbjct: 882 SVVSSGDNLEASL--PMISFKQEELENEGLKPREEP 915
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 232 PVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQ-RSPVQALQPLQAARGTIQS 290
PV+ TP PPL P LP P++ P CP S A PL T+
Sbjct: 978 PVLTVATPPPPLLPTV--PLPAPSSSASP------HPCPSPLSNATAQSPLPILSPTVSP 1029
Query: 291 SPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIG 350
SP P +P S +S G L + +SS S+ S +SS P P P+S+I
Sbjct: 1030 SPSPIPPVEPLMSAAS--PGPPTLSSSSSSSSSSSSFSSSSSSSSPSPP-----PLSAIS 1082
Query: 351 SPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQP 386
S V + + +L P+++ +L + ++P
Sbjct: 1083 SVVSSGDNLEASL--PMISFKQEELENEGLKPREEP 1116
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 232 PVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQ-RSPVQALQPLQAARGTIQS 290
PV+ TP PPL P LP P++ P CP S A PL T+
Sbjct: 978 PVLTVATPPPPLLPTV--PLPAPSSSASP------HPCPSPLSNATAQSPLPILSPTVSP 1029
Query: 291 SPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIG 350
SP P +P S +S G L + +SS S+ S +SS P P P+S+I
Sbjct: 1030 SPSPIPPVEPLMSAAS--PGPPTLSSSSSSSSSSSSFSSSSSSSSPSPP-----PLSAIS 1082
Query: 351 SPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQP 386
S V + + +L P+++ +L + ++P
Sbjct: 1083 SVVSSGDNLEASL--PMISFKQEELENEGLKPREEP 1116
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 42.4 bits (98), Expect = 0.001
Identities = 96/386 (24%), Positives = 130/386 (33%), Gaps = 52/386 (13%)
Query: 82 PASSTPSADSRPSCIGAAPLRPVSTSSSWI--GNQRRVTVTEVLRETARPQSSALHPLLT 139
P + TP A + P P +++S I G T T +L + +L L
Sbjct: 648 PQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQ------DSLQMFLP 701
Query: 140 FESQQQQVGGFEGPEQDEFDKVLASME--LEEPGMELECGVSSEAIPILPAQQREGSVLA 197
E QQ + EGP V+ S ++P + P P Q +
Sbjct: 702 QERSQQPLSA-EGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAP 760
Query: 198 KKARVVDLSGSCQKGPVPAIHKAGIMSAQDESLDPVIQCRTP-RPPLRPGAVGHLP---- 252
+ L G H+A + L R P RPP RP +V P
Sbjct: 761 QIPAAAPLKGPGPSSSPSLPHQAPL--GDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPP 818
Query: 253 ---VPTALTVPTQQLHWEVCPQRS-PVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWL 308
P PT + + Q P A P A G Q P R QP + P
Sbjct: 819 LHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQ--PPLRPQSQPPEGPLP-- 874
Query: 309 SGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGTPKGPQGALQTPIV 368
P P P SS S+ +SS R+P AP S P TP
Sbjct: 875 ------PAPHLPPSSTSSAVASSSETSSRLP----APTPSDFQLQFPPSQGPHKSPTPPP 924
Query: 369 TNHLVQLVTAASRTPQQ---------PTHPSTRAKTRRF-PGPAGILPHQQSGRSLEDIM 418
T HLV A P + P P +A RF P+GI+ ++G +
Sbjct: 925 TLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGA----- 979
Query: 419 VSAPQTPTH-GALAKFQTEIVASSQA 443
+APQT T G L ++ S QA
Sbjct: 980 PAAPQTSTSLGPLTSPAASVLVSGQA 1005
Score = 30.0 bits (66), Expect = 6.9
Identities = 44/190 (23%), Positives = 66/190 (34%), Gaps = 20/190 (10%)
Query: 215 PAIHKAGIMSAQDESLDPVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSP 274
PA+ + Q Q TP+ P A P P + P + + + P +P
Sbjct: 629 PAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQP-PSATP 687
Query: 275 VQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPR-------PRTPNSSCSTP 327
L Q S Q P + Q P S +P P + + +TP
Sbjct: 688 TAILT---------QDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATP 738
Query: 328 SRTSSGLFPRIPLQPQAPVSSIGSPVGTP-KGPQGALQTPIVTNHLVQLVTAASRTPQQP 386
+GL P+ P +P + P P KGP G +P + H L + P
Sbjct: 739 VAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGP-GPSSSPSLP-HQAPLGDSPHLPSPHP 796
Query: 387 THPSTRAKTR 396
T P +R +R
Sbjct: 797 TRPPSRPPSR 806
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.4 bits (98), Expect = 0.001
Identities = 43/188 (22%), Positives = 62/188 (32%), Gaps = 23/188 (12%)
Query: 242 PLRPGAVGHLPVPTALTVPTQQLHWEVCPQR-SPVQALQPLQAARGTIQSSPQNRFPCQP 300
P P G P+P A T P+ + P + +P + +G + + P P P
Sbjct: 1094 PATPSPKG-APMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTP 1152
Query: 301 FQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLF-----------------PRIPLQPQ 343
+P S G A P P + +TP GL P+ L
Sbjct: 1153 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1212
Query: 344 APVSSIGSPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAG 403
+P + +P TP P+G L TP T + TP P + P P
Sbjct: 1213 SPKGAPTTPAATPPSPKGGLATPSPKG----APTTPAATPPSPKGGPATPPPKGAPTPPA 1268
Query: 404 ILPHQQSG 411
P G
Sbjct: 1269 ATPPSLKG 1276
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/163 (25%), Positives = 61/163 (37%), Gaps = 11/163 (6%)
Query: 270 PQRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSR 329
P+ +P + +G + P P P +P S G A P PN + TP
Sbjct: 1237 PKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPS 1296
Query: 330 TSSGLFPRIPL-QPQAPVSSIGSPVGTP--KGPQGALQTPIVTNHLVQ-LVTAASRTPQQ 385
G P P P ++ SP G+P P+GA P VT + T + TP
Sbjct: 1297 PKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSS 1356
Query: 386 PTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVSAPQTPTHG 428
P+T ++ P P P + G ++ P +P G
Sbjct: 1357 KGGPTT-PSSKEGPTPPAATPSHKGGPAM------TPPSPKRG 1392
Score = 34.3 bits (77), Expect = 0.37
Identities = 44/164 (26%), Positives = 59/164 (35%), Gaps = 27/164 (16%)
Query: 242 PLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQPF 301
P P G P P A+T P+ P+ SP P A S+P P P
Sbjct: 1000 PATPSPKG-APTPPAVTPPS--------PKGSPAATPFPKGA------STPPAATPPSPK 1044
Query: 302 QSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGTP--KGP 359
SP++ LP+ + + PS P + P P ++ SP G P P
Sbjct: 1045 GSPAA-----TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Query: 360 QGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAG 403
+GA P T + TP P+T A T P P G
Sbjct: 1100 KGAPMPPAATPPSPK---GGLATPPHKGAPTTPAATP--PSPKG 1138
Score = 33.9 bits (76), Expect = 0.48
Identities = 47/204 (23%), Positives = 75/204 (36%), Gaps = 32/204 (15%)
Query: 241 PPLRPGAVGHLPV--PTALTV----PTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQN 294
PP+ G + ++ P AL + P + R PV P + SS
Sbjct: 465 PPMSSGPISNIEPTSPAALVMAPVAPKEPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLV 524
Query: 295 RFPCQP-FQSPSSWLSGKAHLPR-------------PRTPNSSCSTPSRTSSGLFPRIPL 340
+FP Q Q+ + L G P P + ++PS S+ P IPL
Sbjct: 525 KFPTQKDLQTVPASLEGAPFSPAQAGLTTKKDPTVLPLVQAAPKNSPSFQSTSSSPEIPL 584
Query: 341 QPQAPVS--SIGSPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAK---- 394
P+A ++ S+G P+ K P ++ +P+ N ++ S P ++
Sbjct: 585 SPEATLAKKSLGEPLPIGK-PASSMTSPLGVNSSASVIKTDSYAGPDSAGPLLKSSLITP 643
Query: 395 -TRRFP----GPAGILPHQQSGRS 413
FP PAG+ P G S
Sbjct: 644 TVAAFPLESADPAGVAPTTAKGTS 667
Score = 33.5 bits (75), Expect = 0.63
Identities = 39/151 (25%), Positives = 49/151 (32%), Gaps = 24/151 (15%)
Query: 283 AARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPR-TPNSSCSTPSRTSSGLFPRIPLQ 341
A +G S P P +P S G A P P+ P +TP G P P
Sbjct: 926 APKGIPASPSPKGAPTPPAATPPSPKGGPA-TPSPKWAPTPPAATPPSPKGG--PATPSP 982
Query: 342 PQAPVSSIGSPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGP 401
AP P TP P+G TP + TP T PS + P P
Sbjct: 983 KGAPTP----PAATPPSPKGGPATP---------SPKGAPTPPAVTPPSPKGSPAATPFP 1029
Query: 402 AGIL-------PHQQSGRSLEDIMVSAPQTP 425
G P + + + AP TP
Sbjct: 1030 KGASTPPAATPPSPKGSPAATPLPKGAPTTP 1060
>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2852
Score = 42.0 bits (97), Expect = 0.002
Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 37/196 (18%)
Query: 221 GIMSAQDESLDPVIQCRTPRPPL-RPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQ 279
G+ + DE +P + +PR P RP P+ TAL P V PV +
Sbjct: 1413 GLPTPSDE--EPQLSQESPRTPTHRPALTPAAPLTTALNPP-------VTATEEPVVSPG 1463
Query: 280 PLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIP 339
P Q ++ P P +SP+S + L P TP SS +P
Sbjct: 1464 PTQTTLQQPLELTASQLPAGPTESPASKGVTASLLAIPHTPESS-------------SLP 1510
Query: 340 LQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLV--QLVTAASRTPQQPTHP-STRAKTR 396
+ Q P TP GA++T VT +T +SR+P P P T+A T
Sbjct: 1511 VALQTP---------TPGMVSGAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTV 1561
Query: 397 RFPG--PAGILPHQQS 410
R G P P Q S
Sbjct: 1562 RGHGSLPVRTTPPQPS 1577
>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2924
Score = 42.0 bits (97), Expect = 0.002
Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 37/196 (18%)
Query: 221 GIMSAQDESLDPVIQCRTPRPPL-RPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQ 279
G+ + DE +P + +PR P RP P+ TAL P V PV +
Sbjct: 1485 GLPTPSDE--EPQLSQESPRTPTHRPALTPAAPLTTALNPP-------VTATEEPVVSPG 1535
Query: 280 PLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIP 339
P Q ++ P P +SP+S + L P TP SS +P
Sbjct: 1536 PTQTTLQQPLELTASQLPAGPTESPASKGVTASLLAIPHTPESS-------------SLP 1582
Query: 340 LQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLV--QLVTAASRTPQQPTHP-STRAKTR 396
+ Q P TP GA++T VT +T +SR+P P P T+A T
Sbjct: 1583 VALQTP---------TPGMVSGAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTV 1633
Query: 397 RFPG--PAGILPHQQS 410
R G P P Q S
Sbjct: 1634 RGHGSLPVRTTPPQPS 1649
>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 42.0 bits (97), Expect = 0.002
Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 37/196 (18%)
Query: 221 GIMSAQDESLDPVIQCRTPRPPL-RPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQ 279
G+ + DE +P + +PR P RP P+ TAL P V PV +
Sbjct: 1413 GLPTPSDE--EPQLSQESPRTPTHRPALTPAAPLTTALNPP-------VTATEEPVVSPG 1463
Query: 280 PLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIP 339
P Q ++ P P +SP+S + L P TP SS +P
Sbjct: 1464 PTQTTLQQPLELTASQLPAGPTESPASKGVTASLLAIPHTPESS-------------SLP 1510
Query: 340 LQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLV--QLVTAASRTPQQPTHP-STRAKTR 396
+ Q P TP GA++T VT +T +SR+P P P T+A T
Sbjct: 1511 VALQTP---------TPGMVSGAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTV 1561
Query: 397 RFPG--PAGILPHQQS 410
R G P P Q S
Sbjct: 1562 RGHGSLPVRTTPPQPS 1577
>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 42.0 bits (97), Expect = 0.002
Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 37/196 (18%)
Query: 221 GIMSAQDESLDPVIQCRTPRPPL-RPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQ 279
G+ + DE +P + +PR P RP P+ TAL P V PV +
Sbjct: 1485 GLPTPSDE--EPQLSQESPRTPTHRPALTPAAPLTTALNPP-------VTATEEPVVSPG 1535
Query: 280 PLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIP 339
P Q ++ P P +SP+S + L P TP SS +P
Sbjct: 1536 PTQTTLQQPLELTASQLPAGPTESPASKGVTASLLAIPHTPESS-------------SLP 1582
Query: 340 LQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLV--QLVTAASRTPQQPTHP-STRAKTR 396
+ Q P TP GA++T VT +T +SR+P P P T+A T
Sbjct: 1583 VALQTP---------TPGMVSGAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTV 1633
Query: 397 RFPG--PAGILPHQQS 410
R G P P Q S
Sbjct: 1634 RGHGSLPVRTTPPQPS 1649
>gi|32171215 CREB regulated transcription coactivator 2 [Homo
sapiens]
Length = 693
Score = 42.0 bits (97), Expect = 0.002
Identities = 86/371 (23%), Positives = 127/371 (34%), Gaps = 57/371 (15%)
Query: 7 KLFAVEEEFEDEDFLSAVEDAENRFTGSLPVNAGRLRPVSSRPQETVQAQSSRLLLLHPT 66
K+ A+EE D+ L DA+ + S + + ++ P A L P
Sbjct: 212 KVPAIEENLLDDKHLLKPWDAKKLSSSSSRPRSCEVPGINIFPSPDQPANVPVL----PP 267
Query: 67 APSEALGLPDLDLC-----LPASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRVTVTE 121
A + LPDL LP P + PS G ++ + + +G R + +
Sbjct: 268 AMNTGGSLPDLTNLHFPPPLPTPLDPEETAYPSLSGGNSTSNLTHTMTHLGISRGMGLGP 327
Query: 122 VLRETARPQSSALHPLLTFESQQQQVGGFEGPEQDEFDKVLASMELEEPGMELECGVSSE 181
+ LH L+ S Q + + AS+ +P ++ S
Sbjct: 328 GY------DAPGLHSPLSHPSLQSSLSN---------PNLQASLSSPQPQLQ-----GSH 367
Query: 182 AIPILPAQQREGSVLAKKARVVDLSGSCQKGPVPAIHKAGIMSAQDESLDPVIQCRTP-- 239
+ P LPA VL L P + + ++ P TP
Sbjct: 368 SHPSLPASSLARHVLP----TTSLGHPSLSAPALSSSSSSSSTSSPVLGAPSYPASTPGA 423
Query: 240 -----RPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQN 294
R PL P ++ L P QQL + P SP + T + S
Sbjct: 424 SPHHRRVPLSPLSL--LAGPADARRSQQQLPKQFSPTMSPTLSSITQGVPLDTSKLSTDQ 481
Query: 295 RFPCQPFQSPSSWLSGKAHLPR----PRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIG 350
R P P+ SPS L + H P+ P P+ SCS S S G QP S G
Sbjct: 482 RLPPYPYSSPSLVLPTQPHTPKSLQQPGLPSQSCSVQS--SGG-------QPPGRQSHYG 532
Query: 351 SPVGTPKGPQG 361
+P P GP G
Sbjct: 533 TPY--PPGPSG 541
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 42.0 bits (97), Expect = 0.002
Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 12/166 (7%)
Query: 267 EVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCST 326
+V PQ P++ +P Q P P ++P+ S P +T S
Sbjct: 164 QVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASA 223
Query: 327 PSRTSSGLFPRIPLQPQAPVSSI----------GSPVGTPKGPQGALQTPIVTNHLVQLV 376
P R + G P + +A +SS G + + P G + V
Sbjct: 224 PGRGNYG--PPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAPG 281
Query: 377 TAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVSAP 422
+ S P QP P T +R PGPAG P Q+ + D +AP
Sbjct: 282 SVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEVAPSDPGTTAP 327
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 42.0 bits (97), Expect = 0.002
Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 12/166 (7%)
Query: 267 EVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCST 326
+V PQ P++ +P Q P P ++P+ S P +T S
Sbjct: 160 QVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASA 219
Query: 327 PSRTSSGLFPRIPLQPQAPVSSI----------GSPVGTPKGPQGALQTPIVTNHLVQLV 376
P R + G P + +A +SS G + + P G + V
Sbjct: 220 PGRGNYG--PPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAPG 277
Query: 377 TAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVSAP 422
+ S P QP P T +R PGPAG P Q+ + D +AP
Sbjct: 278 SVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEVAPSDPGTTAP 323
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 41.6 bits (96), Expect = 0.002
Identities = 61/262 (23%), Positives = 94/262 (35%), Gaps = 30/262 (11%)
Query: 275 VQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCST----PSRT 330
V A + A + + + P +P S A +P P P S + T
Sbjct: 981 VHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPT 1040
Query: 331 SSGLFPRIPLQPQAPVSSIGSPVGTPKGPQGALQTP---------IVTNHLVQLVTAASR 381
S P +P +P +++ +P P P A+ TP + T AA
Sbjct: 1041 SPAAAVPTPEEPTSPAAAVPTP-EEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP 1099
Query: 382 TPQQPTHPSTRAKTRRFP-GPAGILPHQQSGRSLEDIMVSAPQTPTHGALAKFQTEIVAS 440
TP++PT P+ T P PA +P + S V P+ P A A E AS
Sbjct: 1100 TPEEPTSPAAAVPTPEEPASPAAAVPTPEEPAS-PAAAVPTPEEPAFPAPAVPTPEESAS 1158
Query: 441 SQASVEEDFGRGPWLTMKSTLGLDERDPSCFLCTYSIVMVLRKQAALKQLPRNKVPNMAV 500
+ +V P ++ P+ ++V L + + P VP A
Sbjct: 1159 AAVAV-------PTPEESASPAAAVPTPAESASFAAVVATLEEPTS----PAASVPTPAA 1207
Query: 501 MIKSLTRSTMDASVVFKDPTGE 522
M+ +L T A+ V PT E
Sbjct: 1208 MVATLEEFTSPAASV---PTSE 1226
Score = 33.5 bits (75), Expect = 0.63
Identities = 50/229 (21%), Positives = 83/229 (36%), Gaps = 28/229 (12%)
Query: 220 AGIMSAQDESLDPVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQ 279
A + +E P TP P P A +P P P + + V
Sbjct: 1108 AAAVPTPEEPASPAAAVPTPEEPASPAAA--VPTPEEPAFPAPAVPTPEESASAAVAVPT 1165
Query: 280 PLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGL----F 335
P ++A SP P P +S +S+ + A L P +P +S TP+ + L
Sbjct: 1166 PEESA------SPAAAVP-TPAES-ASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTS 1217
Query: 336 PRIPLQPQAPVSSIGSPVGTPKGPQG------ALQTP------IVTNHLVQLVTAASRTP 383
P + +S+ + V P+ P L+ P ++T + A+ TP
Sbjct: 1218 PAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTP 1277
Query: 384 QQPTHPSTRAKTRRFP-GPAGILPHQQSGRSLEDIMVSAPQTPTHGALA 431
++P P+ P PA +P + ++ V P+ P A A
Sbjct: 1278 EEPASPAAAVSNLEEPASPAAAVPTPEVA-AIPAASVPTPEVPAIPAAA 1325
>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 41.6 bits (96), Expect = 0.002
Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 37/196 (18%)
Query: 221 GIMSAQDESLDPVIQCRTPRPPL-RPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQ 279
G+ + DE +P + +PR P RP P+ TAL P V PV +
Sbjct: 1413 GLPTPSDE--EPQLSQESPRTPTHRPALTPAAPLTTALNPP-------VTATEEPVVSPG 1463
Query: 280 PLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIP 339
P Q ++ P P +SP+S + L P TP SS +P
Sbjct: 1464 PTQTTLQQPLELTASQLPAGPTESPASKGVTASLLAIPHTPESS-------------SLP 1510
Query: 340 LQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLV--QLVTAASRTPQQPTHP-STRAKTR 396
+ Q P TP GA++T VT +T +SR+P P P T+A T
Sbjct: 1511 VALQTP---------TPGMVSGAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTV 1561
Query: 397 RFPG--PAGILPHQQS 410
R G P P Q S
Sbjct: 1562 RGHGSLPVRTTPLQPS 1577
>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 41.6 bits (96), Expect = 0.002
Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 37/196 (18%)
Query: 221 GIMSAQDESLDPVIQCRTPRPPL-RPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQ 279
G+ + DE +P + +PR P RP P+ TAL P V PV +
Sbjct: 1485 GLPTPSDE--EPQLSQESPRTPTHRPALTPAAPLTTALNPP-------VTATEEPVVSPG 1535
Query: 280 PLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIP 339
P Q ++ P P +SP+S + L P TP SS +P
Sbjct: 1536 PTQTTLQQPLELTASQLPAGPTESPASKGVTASLLAIPHTPESS-------------SLP 1582
Query: 340 LQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLV--QLVTAASRTPQQPTHP-STRAKTR 396
+ Q P TP GA++T VT +T +SR+P P P T+A T
Sbjct: 1583 VALQTP---------TPGMVSGAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTV 1633
Query: 397 RFPG--PAGILPHQQS 410
R G P P Q S
Sbjct: 1634 RGHGSLPVRTTPLQPS 1649
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 41.6 bits (96), Expect = 0.002
Identities = 42/189 (22%), Positives = 68/189 (35%), Gaps = 21/189 (11%)
Query: 242 PLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQPF 301
P G LP T +P P+ +P P ++PQ P +P
Sbjct: 1334 PATSGTSPTLPKSTNQELPGTTATQTTGPRPTPASTTGP---------TTPQPGQPTRPT 1384
Query: 302 QSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIG----SPVGTPK 357
+ ++ P+TP+++ S P+ S P+ PV++ + TP
Sbjct: 1385 ATETTQTRTTTEYTTPQTPHTTHSPPTAGS-------PVPSTGPVTATSFHATTTYPTPS 1437
Query: 358 GPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDI 417
P+ L T V LVT ++ T PTH P G +P + ++
Sbjct: 1438 HPETTLPTH-VPPFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPPPTTLKATGST 1496
Query: 418 MVSAPQTPT 426
+ P TPT
Sbjct: 1497 HTAPPITPT 1505
Score = 33.5 bits (75), Expect = 0.63
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 13/121 (10%)
Query: 318 RTP--NSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGT----------PKGPQGALQT 365
RTP +++ +T SR + P P+SS G T P P L T
Sbjct: 1779 RTPVAHTTSATSSRLPTPFTTHSPPTGTTPISSTGPVTATSFQTTTTYPTPSHPHTTLPT 1838
Query: 366 PIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVSAPQTP 425
V + LVT ++ T PTH P G +P + ++ + P TP
Sbjct: 1839 H-VPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTP 1897
Query: 426 T 426
T
Sbjct: 1898 T 1898
Score = 30.0 bits (66), Expect = 6.9
Identities = 36/135 (26%), Positives = 48/135 (35%), Gaps = 6/135 (4%)
Query: 314 LPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLV 373
LP P T +S + P T+ L Q P + S G G P T
Sbjct: 1331 LPTPATSGTSPTLPKSTNQELPGTTATQTTGPRPTPASTTGPTTPQPGQPTRPTATETTQ 1390
Query: 374 QLVTAASRTPQQPTHPSTRAKTRRFPGPA-GILPHQQSGRSLEDIMVSAPQT--PTHGAL 430
T TPQ P H + T P P+ G + + S P+T PTH +
Sbjct: 1391 TRTTTEYTTPQTP-HTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPTH--V 1447
Query: 431 AKFQTEIVASSQASV 445
F T +V S +V
Sbjct: 1448 PPFSTSLVTPSTHTV 1462
Score = 30.0 bits (66), Expect = 6.9
Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 18/160 (11%)
Query: 252 PVPTALTVPTQ-QLHWEVCPQRSPVQALQP---LQAARGTIQSSPQNRFPCQPFQSPSSW 307
P + +PT Q+ P + P ++A T + P QSPSS+
Sbjct: 1850 PSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTPTTSGTSQSPSSF 1909
Query: 308 LSGKAHLPRPR----------TPNSSCS-TPSRTSSGLFPRIPLQPQAPVSSIGSPVGTP 356
+ K P TP S+ + TP TS+G + A S + +P T
Sbjct: 1910 STAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSASSSRLPTPFTTH 1969
Query: 357 KGPQGALQTPI-VTNHLVQLVTAASRTPQQPTHPSTRAKT 395
P G+ +P T + + T P+HP T T
Sbjct: 1970 SPPTGS--SPFSSTGPMTATSFQTTTTYPTPSHPQTTLPT 2007
Score = 29.6 bits (65), Expect = 9.0
Identities = 29/103 (28%), Positives = 37/103 (35%), Gaps = 13/103 (12%)
Query: 316 RPRTP--NSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGT----------PKGPQGAL 363
R RTP +++ +T SR P +P SS G T P PQ L
Sbjct: 1553 RTRTPVAHTNSATSSRPPPPFTTHSPPTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTL 1612
Query: 364 QTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILP 406
T V LVT ++ T PTH P G +P
Sbjct: 1613 PTH-VPPFSTSLVTPSTHTVITPTHAQMATSASIHSMPTGTIP 1654
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 40.8 bits (94), Expect = 0.004
Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 24/152 (15%)
Query: 216 AIHKAGIMSAQDESLDPVIQCRTPRPPLRP---GAVGHLPVPTALTVPTQQLHWE----- 267
++ AG S PV R P PP P GA P+P ++ Q WE
Sbjct: 332 SLGSAGPSGTLPRSWQPV--SRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASR 389
Query: 268 -VCP-----QRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPN 321
+ P R+P LQP + QS PQ + P QP P + P P +
Sbjct: 390 AMLPGSPLFTRAPPPKLQPQPQPQPQPQSQPQPQLPPQPQTQPQT--------PTPAPQH 441
Query: 322 SSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPV 353
+ P P L+P+ + + +PV
Sbjct: 442 PQQTWPPVNEGPPKPPTELEPEPEIEGLLTPV 473
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 40.8 bits (94), Expect = 0.004
Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 24/152 (15%)
Query: 216 AIHKAGIMSAQDESLDPVIQCRTPRPPLRP---GAVGHLPVPTALTVPTQQLHWE----- 267
++ AG S PV R P PP P GA P+P ++ Q WE
Sbjct: 332 SLGSAGPSGTLPRSWQPV--SRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASR 389
Query: 268 -VCP-----QRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPN 321
+ P R+P LQP + QS PQ + P QP P + P P +
Sbjct: 390 AMLPGSPLFTRAPPPKLQPQPQPQPQPQSQPQPQLPPQPQTQPQT--------PTPAPQH 441
Query: 322 SSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPV 353
+ P P L+P+ + + +PV
Sbjct: 442 PQQTWPPVNEGPPKPPTELEPEPEIEGLLTPV 473
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 40.8 bits (94), Expect = 0.004
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 270 PQRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSR 329
P+ S P+Q+ + QS P+ P QSP S G+ L + P S
Sbjct: 645 PESSQSPPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAPEGEDSLSPLQIPQSPLEGEDS 704
Query: 330 TSSGLFPRIPLQPQAPVSSIGSPVGTPKGP--QGALQTPIVTNHLVQLVTAASRTPQQPT 387
SS FP+ P + + +S + P P+G Q +LQ+P+ ++ P+ P
Sbjct: 705 LSSLHFPQSPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSFPESPQ 764
Query: 388 HP 389
P
Sbjct: 765 SP 766
Score = 35.8 bits (81), Expect = 0.13
Identities = 52/217 (23%), Positives = 78/217 (35%), Gaps = 26/217 (11%)
Query: 289 QSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSC--STPSRTSSGLFPRIPLQPQAPV 346
QS PQ P P S L G+ ++P S C STPS P+ PV
Sbjct: 597 QSPPQGEDSMSPLYFPQSPLQGEEFQSSLQSPVSICSSSTPSSLPQSFPESSQSPPEGPV 656
Query: 347 SS-IGSPVGTPKG--PQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAG 403
S + SP P+G Q LQ+P ++ + PQ P + FP
Sbjct: 657 QSPLHSPQSPPEGMHSQSPLQSPESAPEGEDSLSPL-QIPQSPLEGEDSLSSLHFP---- 711
Query: 404 ILPHQQSGRSLEDIM--VSAPQTPTHGALAKFQTEI-------VASSQASVEEDFGRGPW 454
QS ED + + PQ P G FQ+ + +S+ S+ + F P
Sbjct: 712 -----QSPPEWEDSLSPLHFPQFPPQG--EDFQSSLQSPVSICSSSTSLSLPQSFPESPQ 764
Query: 455 LTMKSTLGLDERDPSCFLCTYSIVMVLRKQAALKQLP 491
+ + P +Y++ +L+ Q P
Sbjct: 765 SPPEGPAQSPLQRPVSSFFSYTLASLLQSSHESPQSP 801
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 40.4 bits (93), Expect = 0.005
Identities = 48/197 (24%), Positives = 72/197 (36%), Gaps = 12/197 (6%)
Query: 237 RTPRPP----LRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSP 292
+ P PP L GA+ P +L T W+ P P+Q + + T+Q +P
Sbjct: 311 QVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARPSLATVQ-TP 369
Query: 293 QNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSP 352
+ P PF S + + P+ P + ++ G R+P Q P + SP
Sbjct: 370 SHPPPPYPFGSQQA-SQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSP 428
Query: 353 VGTPKG-PQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSG 411
+P QG+ + N Q + R PQ P + PG P Q G
Sbjct: 429 ASSPSSFQQGSPASSPTVNQTQQQM--GPRPPQNNPLPQGFQQPVSSPGRN---PMVQQG 483
Query: 412 RSLEDIMVSAPQTPTHG 428
+ MV Q P G
Sbjct: 484 NVPPNFMVMQQQPPNQG 500
Score = 29.6 bits (65), Expect = 9.0
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 304 PSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIGSPVGTPKGPQGAL 363
PS + G H+P+ +S+ P+ SS P I +SS +PV P P
Sbjct: 1692 PSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQLPSPP--CT 1749
Query: 364 QTPIVTNH----LVQLVTAASRTPQ------QPTHPSTRAKTRRFP 399
+P+V +H V+ + +PQ Q T PS+++ T P
Sbjct: 1750 SSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSP 1795
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.0 bits (92), Expect = 0.007
Identities = 102/431 (23%), Positives = 137/431 (31%), Gaps = 100/431 (23%)
Query: 36 PVNAGRLRPVSSRPQETVQAQS-------SRLLLLHPTA-------PSEALGLPDLDLCL 81
P + R RP + P+++V + S S P+A S +L L
Sbjct: 192 PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS 251
Query: 82 PASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRVTVTEVLRETARPQSSALHPLLTFE 141
PA S PSA P AP P + R VT ++ A P L
Sbjct: 252 PARSGPSARGTPR----APAHPSQPKPKGLQALRPPQVTPPRKDAA--------PAL--- 296
Query: 142 SQQQQVGGFEGPEQDEFDKVLASMELEEPGMELECGVSSEAIPILPAQQREGSVLAKKAR 201
GP L+S L P + S+A P LPA S+ + A
Sbjct: 297 ----------GP--------LSSSPLATPSPS--AALQSQAPPTLPATPHSSSLTCQLAT 336
Query: 202 VVDLSGSCQKGP-----VPAIHKAGIMSAQDESLDPVIQCR---TPRPPLRPGAVGHLPV 253
+ L+ P +P+ A P +Q P PPL P A
Sbjct: 337 PLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLA------ 390
Query: 254 PTALTVPTQQLHWEVCPQRSPVQALQPLQAARGTIQSSPQNRFPCQPFQSPSS---WLSG 310
T P PQ P AL PLQA S P + Q+P++ L
Sbjct: 391 ----TPP---------PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 437
Query: 311 KAHLPRPRTP-------------NSSCSTPSRTSSGL-FPRIPLQPQAPVSSIGSPVGT- 355
P P P + S + PS+ L P + + P P S SP T
Sbjct: 438 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 497
Query: 356 -PKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSL 414
P+ P P+ A TP PS A FPG A P + +
Sbjct: 498 PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS---FPGQAPFSP--SASLPM 552
Query: 415 EDIMVSAPQTP 425
+ PQ P
Sbjct: 553 SPLATPPPQAP 563
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 39.7 bits (91), Expect = 0.009
Identities = 101/416 (24%), Positives = 139/416 (33%), Gaps = 93/416 (22%)
Query: 65 PTAPSEALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRV-TVTE-- 121
P P LPD PA +TP P + AAP ST+SS V T+T+
Sbjct: 1583 PLTPGPPHPLPDT----PAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGA 1638
Query: 122 ---------------VLRETARPQ-------------------SSALHPLLTFESQQQ-- 145
A PQ SS+ HPL T S
Sbjct: 1639 SAAPGDPHPPGPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLS 1698
Query: 146 ----QVGGFEGPEQDEFDKVLASMELEEPGMEL----ECGVSSEAIPILPAQQREGSVLA 197
+ GG G V + EL + + G SS P P Q S L
Sbjct: 1699 SLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKL- 1757
Query: 198 KKARVVDLSGSCQKGPV-----PAIHKAGIMSAQDESLDPVIQCRTPRPPLRPGAVGH-- 250
+ R + SG + GP P + +S D ++ R P G G
Sbjct: 1758 -RGRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPV 1816
Query: 251 --------LPVPTALTVPTQQLHWEVCPQRSPV----QALQPLQAARGTIQSSPQNRFPC 298
+P+PTA ++P + L WE P P QP +A T+++S +
Sbjct: 1817 AVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASALATVKASIISELSS 1876
Query: 299 QPFQSPSSWLSGKAHLPRPRTPN---------SSCSTPSRTSSGLFPRIPLQPQAPVSSI 349
+ Q S +G A LP R + + P RTSS R L + S +
Sbjct: 1877 KLQQFGGSSAAGGA-LPWARGGSGGGGDSHHGGASYVPERTSS--LQRQRLSDDSQSSLL 1933
Query: 350 GSPVGT-----PKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPG 400
PV + PK P P+ T V AA+ P+ S+ TR G
Sbjct: 1934 SKPVSSLFQNWPKPP----LPPLPTGTGVSPTAAAAPGATSPSASSSSTSTRHLQG 1985
Score = 31.2 bits (69), Expect = 3.1
Identities = 44/189 (23%), Positives = 66/189 (34%), Gaps = 23/189 (12%)
Query: 252 PVPTALTVPTQQLHWEVCPQRSP---VQALQPLQAARGTIQSSPQNRFPCQPFQSPSSWL 308
P+P A P H P + P + G P R P S W
Sbjct: 992 PLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWR 1051
Query: 309 SGKAHLPRPRTPN----SSCSTPSRTSSGLFPR-IPLQPQAPVSSIGSPVGTPKGPQGAL 363
G P P P+ S +S G R L P+A +++ P + +G +G
Sbjct: 1052 GGGPS-PTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKG-- 1108
Query: 364 QTPIVTNHLVQLVTAASRTPQQ----PTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMV 419
P+V T PQ+ P PS + P PA P +++ + I++
Sbjct: 1109 --PLVKQ------TKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTIII 1160
Query: 420 SAPQTPTHG 428
AP T + G
Sbjct: 1161 KAPSTSSSG 1169
>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
Length = 669
Score = 39.3 bits (90), Expect = 0.011
Identities = 58/237 (24%), Positives = 82/237 (34%), Gaps = 44/237 (18%)
Query: 183 IPILPAQQREGSVLAKKARVVDLSGSCQKGPVPAIHKAGIMSAQDESLDPVIQCRTPRPP 242
+P P + G + KK +LS +K P+P + E D + P PP
Sbjct: 32 LPKKPPKPEFGKL--KKFSQPELSEHPKKAPLPEFGAVSLKPPPPEVTDLP---KKPPPP 86
Query: 243 LRPGAVGHLPVPTALTVPTQQLHWEVC--PQRSPVQALQPLQAARGTIQSSPQNRFPCQP 300
P P +P + EV P++ L L + ++P FP +P
Sbjct: 87 EVTDLPKKPPPPEVTDLPKKPPPPEVTDLPKKPSKLELSDLSKKFPQLGATP---FPRKP 143
Query: 301 FQSPSSWLSGKAHLPRPRTP----------NSSCSTPSRTSSGLFPRIPLQPQAPVSSIG 350
Q KA LP P P + PS SG FPR QP+A +
Sbjct: 144 LQPEVGEAPLKASLPEPGAPARKPLQPDELSHPARPPSEPKSGAFPRKLWQPEAGEA--- 200
Query: 351 SPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGP-AGILP 406
TP+ PQ L T P++P P ++ P P G LP
Sbjct: 201 ----TPRSPQPELST----------------FPKKPAQPEFNVYPKKPPQPQVGGLP 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,119,913
Number of Sequences: 37866
Number of extensions: 1610914
Number of successful extensions: 5449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 4971
Number of HSP's gapped (non-prelim): 732
length of query: 647
length of database: 18,247,518
effective HSP length: 109
effective length of query: 538
effective length of database: 14,120,124
effective search space: 7596626712
effective search space used: 7596626712
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.