Guide to the Human Genome
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Name: ECHDC1 Sequence: fasta or formatted (145aa) NCBI GI: 50593027
Description:

enoyl Coenzyme A hydratase domain containing 1 isoform 2

Referenced in:

Amino Acid Catabolism
Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [301aa] enoyl Coenzyme A hydratase domain containing 1 isoform 1
alt prot [226aa] enoyl Coenzyme A hydratase domain containing 1 isoform 3
alt prot [70aa] enoyl Coenzyme A hydratase domain containing 1 isoform 4
alt prot [307aa] enoyl Coenzyme A hydratase domain containing 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1          6           1
 C cysteine            1.4          2           2
 D aspartate           2.1          3           1
 E glutamate           6.2          9           3
 F phenylalanine       3.4          5           1
 G glycine            11.0         16           2
 H histidine           1.4          2           1
 I isoleucine          4.8          7           1
 K lysine              7.6         11           2
 L leucine            13.1         19           2
 M methionine          3.4          5           2
 N asparagine          5.5          8           2
 P proline             2.1          3           1
 Q glutamine           3.4          5           2
 R arginine            4.1          6           1
 S serine             11.7         17           2
 T threonine           6.9         10           1
 V valine              3.4          5           1
 W tryptophan          1.4          2           1
 Y tyrosine            2.8          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   enoyl Coenzyme A hydratase domain containing 1 isofo... 
ECHDC1                0.811   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.811   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.453   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.264   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC2                0.053   enoyl Coenzyme A hydratase domain containing 2 [Hom...
ECHS1                 0.034   mitochondrial short-chain enoyl-coenzyme A hydratas...
ECHDC3                0.023   enoyl Coenzyme A hydratase domain containing 3 [Homo...
HIBCH                 0.023   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.023   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
MYO5A                 0.019   myosin VA isoform 2 
MYO5A                 0.019   myosin VA isoform 1 
EHHADH                0.011   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
TTN                   0.011   titin isoform N2-A 
GRIN2A                0.008   N-methyl-D-aspartate receptor subunit 2A isoform 2 ...
GRIN2A                0.008   N-methyl-D-aspartate receptor subunit 2A isoform 1 ...
GRIN2A                0.008   N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...
PLAG1                 0.008   pleiomorphic adenoma gene 1 isoform b 
PLAG1                 0.008   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 0.008   pleiomorphic adenoma gene 1 isoform a 
LOC100128139          0.008   PREDICTED: hypothetical protein 
LOC100128139          0.008   PREDICTED: hypothetical protein 
LOC100128139          0.008   PREDICTED: hypothetical protein 
INTS6                 0.008   integrator complex subunit 6 isoform b 
INTS6                 0.008   integrator complex subunit 6 isoform a 
BCL9                  0.008   B-cell CLL/lymphoma 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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