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Search of human proteins with 31377777
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377777 NK2 homeobox 8 [Homo sapiens]
(239 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377777 NK2 homeobox 8 [Homo sapiens] 489 e-139
gi|4505401 NK2 transcription factor related, locus 2 [Homo sapiens] 151 6e-37
gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens] 138 5e-33
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap... 127 7e-30
gi|157426823 NK2 homeobox 4 [Homo sapiens] 127 7e-30
gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapi... 127 9e-30
gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens] 127 9e-30
gi|210147470 NK2 transcription factor related, locus 6 [Homo sap... 122 3e-28
gi|4502365 NK3 homeobox 2 [Homo sapiens] 93 2e-19
gi|19923352 NK3 homeobox 1 [Homo sapiens] 92 4e-19
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 86 3e-17
gi|157743259 H6 family homeobox 3 [Homo sapiens] 84 8e-17
gi|70608170 H6 family homeobox 2 [Homo sapiens] 83 2e-16
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 80 2e-15
gi|4758168 distal-less homeobox 2 [Homo sapiens] 79 3e-15
gi|118582284 msh homeobox 1 [Homo sapiens] 79 5e-15
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 78 6e-15
gi|226437602 NK1 homeobox 2 [Homo sapiens] 77 1e-14
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 1e-14
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 77 1e-14
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 1e-14
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 1e-14
gi|63054872 ladybird homeobox 1 [Homo sapiens] 77 1e-14
gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens] 77 1e-14
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 77 1e-14
gi|4504465 homeobox B2 [Homo sapiens] 76 3e-14
gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens] 74 9e-14
gi|45593144 gastrulation brain homeo box 2 [Homo sapiens] 74 9e-14
gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens] 74 1e-13
gi|147901462 brain specific homeobox [Homo sapiens] 72 4e-13
>gi|31377777 NK2 homeobox 8 [Homo sapiens]
Length = 239
Score = 489 bits (1260), Expect = e-139
Identities = 239/239 (100%), Positives = 239/239 (100%)
Query: 1 MATSGRLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLE 60
MATSGRLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLE
Sbjct: 1 MATSGRLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLE 60
Query: 61 TSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASL 120
TSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASL
Sbjct: 61 TSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASL 120
Query: 121 LRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQP 180
LRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQP
Sbjct: 121 LRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQP 180
Query: 181 CGGGGGGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPAYQHLASPALVSWNW 239
CGGGGGGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPAYQHLASPALVSWNW
Sbjct: 181 CGGGGGGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPAYQHLASPALVSWNW 239
>gi|4505401 NK2 transcription factor related, locus 2 [Homo sapiens]
Length = 273
Score = 151 bits (381), Expect = 6e-37
Identities = 103/254 (40%), Positives = 126/254 (49%), Gaps = 61/254 (24%)
Query: 3 TSGRLSFTVRSLLDLPE---QDAQHLPRREPEPRAPQP---------------------- 37
T+ + F+V+ +LDLP+ ++ E E P+P
Sbjct: 4 TNTKTGFSVKDILDLPDTNDEEGSVAEGPEEENEGPEPAKRAGPLGQGALDAVQSLPLKN 63
Query: 38 -------DPCAAWLDSERGHYPS---------SDESSLETSPPDSSQRPSARPASPGS-- 79
+P WL S G S +SS ++ P + + P +PG
Sbjct: 64 PFYDSSDNPYTRWLASTEGLQYSLHGLAAGAPPQDSSSKSPEPSADESPDNDKETPGGGG 123
Query: 80 DAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKL 139
DA K++KRRVLFSKAQT ELERRFRQQRYLSAPERE LASL+RLTPTQVKIWFQNHRYK+
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 140 KRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCG 199
KRARA E L + RRV VPVLVRDG+PC AQ+
Sbjct: 184 KRARAEKGMEVTPLPSP----------RRVAVPVLVRDGKPC--------HALKAQDLAA 225
Query: 200 APPAAACPLPGYPA 213
A A P Y A
Sbjct: 226 ATFQAGIPFSAYSA 239
>gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens]
Length = 324
Score = 138 bits (347), Expect = 5e-33
Identities = 100/249 (40%), Positives = 120/249 (48%), Gaps = 46/249 (18%)
Query: 18 PEQDAQHLPRREPE-PRAPQPDPCAAWLDSERGHYPSSDES------------------- 57
PE A LP E RAP P CA+ + YP +
Sbjct: 59 PEAAAPGLPELRAELGRAPSPAKCASAFPAAPAFYPRAYSDPDPAKDPRAEKKELCALQK 118
Query: 58 --SLETSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPERE 115
LE + D+++RP AR +R+K RVLFS+AQ ELERRF+QQRYLSAPER+
Sbjct: 119 AVELEKTEADNAERPRAR---------RRRKPRVLFSQAQVYELERRFKQQRYLSAPERD 169
Query: 116 QLASLLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLV 175
QLAS+L+LT TQVKIWFQN RYK KR R E L P RR+ VPVLV
Sbjct: 170 QLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPP-----PPPPPARRIAVPVLV 224
Query: 176 RDGQPCGGGGGGEVGTAAAQEKCGAPPAAACPLPGYPAFG-----PG-SALGLFPAYQHL 229
RDG+PC G+ A G P P YP +G PG S +PA
Sbjct: 225 RDGKPC----LGDSAPYAPAYGVGLNPYGYNAYPAYPGYGGAACSPGYSCTAAYPAGPSP 280
Query: 230 ASPALVSWN 238
A PA + N
Sbjct: 281 AQPATAAAN 289
>gi|148746211 NK2 transcription factor related, locus 3 [Homo
sapiens]
Length = 364
Score = 127 bits (320), Expect = 7e-30
Identities = 87/206 (42%), Positives = 108/206 (52%), Gaps = 27/206 (13%)
Query: 31 EPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKRRVL 90
EP+ + +P +R + SLET+ + S RP R+K RVL
Sbjct: 103 EPKEHEEEPEVV---RDRSQKSCQLKKSLETAGDCKAAEESERPKP-----RSRRKPRVL 154
Query: 91 FSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPGAAES 150
FS+AQ ELERRF+QQRYLSAPERE LAS L+LT TQVKIWFQN RYK KR R
Sbjct: 155 FSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQR------- 207
Query: 151 PDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCGAP---PAAACP 207
D + HA P RRV VPVLVRDG+PC + + GAP A+A
Sbjct: 208 QDKSLELGAHAPPPPPRRVAVPVLVRDGKPC---------VTPSAQAYGAPYSVGASAYS 258
Query: 208 LPGYPAFGPGSALGLFPAYQHLASPA 233
+PA+G G++ A A+ A
Sbjct: 259 YNSFPAYGYGNSAAAAAAAAAAAAAA 284
>gi|157426823 NK2 homeobox 4 [Homo sapiens]
Length = 354
Score = 127 bits (320), Expect = 7e-30
Identities = 77/149 (51%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
Query: 81 AEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLK 140
A R+KRRVLFS+AQ ELERRF+QQ+YLSAPERE LAS++ LTPTQVKIWFQNHRYK+K
Sbjct: 186 AAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMK 245
Query: 141 R-ARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEV-GTAAAQEKC 198
R A+ A + P RRV VPVLV+DG+PC G G A Q
Sbjct: 246 RQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPA 305
Query: 199 GAP-PAAACPLPGYPAF-GPGSALGLFPA 225
P P P PA GPG L A
Sbjct: 306 PTPAPELEELSPSPPALHGPGGGLAALDA 334
>gi|118766339 thyroid transcription factor 1 isoform 1 [Homo
sapiens]
Length = 401
Score = 127 bits (319), Expect = 9e-30
Identities = 96/247 (38%), Positives = 117/247 (47%), Gaps = 38/247 (15%)
Query: 18 PEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLET--SPPDSSQRPSARPA 75
P QD P PDP + G + S + S D S+ + P+
Sbjct: 129 PYQDTMRNSASGPGWYGANPDPRFPAISRFMGPASGMNMSGMGGLGSLGDVSKNMAPLPS 188
Query: 76 SPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNH 135
+P R+KRRVLFS+AQ ELERRF+QQ+YLSAPERE LAS++ LTPTQVKIWFQNH
Sbjct: 189 AP------RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH 242
Query: 136 RYKLKRARAPGAAESP------------DLAASAELHAAPGLLRRVVVPVLVRDGQPCGG 183
RYK+KR AA+ + A RRV VPVLV+DG+PC
Sbjct: 243 RYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQQQAQQQSPRRVAVPVLVKDGKPCQA 302
Query: 184 GGGGEVGTAA--------AQEKCGAPPAAACP---------LPGYPAFGPGSALGLFPAY 226
G G A+ AQ + A AAA L +P PGSA
Sbjct: 303 GAPAP-GAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSPDLA 361
Query: 227 QHLASPA 233
H ASPA
Sbjct: 362 HHAASPA 368
>gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens]
Length = 371
Score = 127 bits (319), Expect = 9e-30
Identities = 96/247 (38%), Positives = 117/247 (47%), Gaps = 38/247 (15%)
Query: 18 PEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLET--SPPDSSQRPSARPA 75
P QD P PDP + G + S + S D S+ + P+
Sbjct: 99 PYQDTMRNSASGPGWYGANPDPRFPAISRFMGPASGMNMSGMGGLGSLGDVSKNMAPLPS 158
Query: 76 SPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNH 135
+P R+KRRVLFS+AQ ELERRF+QQ+YLSAPERE LAS++ LTPTQVKIWFQNH
Sbjct: 159 AP------RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH 212
Query: 136 RYKLKRARAPGAAESP------------DLAASAELHAAPGLLRRVVVPVLVRDGQPCGG 183
RYK+KR AA+ + A RRV VPVLV+DG+PC
Sbjct: 213 RYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQQQAQQQSPRRVAVPVLVKDGKPCQA 272
Query: 184 GGGGEVGTAA--------AQEKCGAPPAAACP---------LPGYPAFGPGSALGLFPAY 226
G G A+ AQ + A AAA L +P PGSA
Sbjct: 273 GAPAP-GAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSPDLA 331
Query: 227 QHLASPA 233
H ASPA
Sbjct: 332 HHAASPA 338
>gi|210147470 NK2 transcription factor related, locus 6 [Homo
sapiens]
Length = 219
Score = 122 bits (306), Expect = 3e-28
Identities = 76/141 (53%), Positives = 82/141 (58%), Gaps = 24/141 (17%)
Query: 81 AEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLK 140
A +R+K RVLFS+AQ L LERRF+QQRYLSAPERE LAS L+LT TQVKIWFQN RYK K
Sbjct: 47 ARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCK 106
Query: 141 RARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCGA 200
R R S EL P RRV VPVLVRDG+PC G G
Sbjct: 107 RQRQD---------KSLELAGHPLTPRRVAVPVLVRDGKPCLGPG--------------- 142
Query: 201 PPAAACPLPGYPAFGPGSALG 221
P A A P P A P S G
Sbjct: 143 PGAPAFPSPYSAAVSPYSCYG 163
>gi|4502365 NK3 homeobox 2 [Homo sapiens]
Length = 333
Score = 92.8 bits (229), Expect = 2e-19
Identities = 51/103 (49%), Positives = 63/103 (61%), Gaps = 11/103 (10%)
Query: 77 PGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHR 136
P + ++K+ R FS AQ ELERRF QRYLS PER LA+ L+LT TQVKIWFQN R
Sbjct: 199 PAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRR 258
Query: 137 YKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQ 179
YK KR + +A+L A+ ++V V VLVRD Q
Sbjct: 259 YKTKRRQ-----------MAADLLASAPAAKKVAVKVLVRDDQ 290
>gi|19923352 NK3 homeobox 1 [Homo sapiens]
Length = 234
Score = 92.0 bits (227), Expect = 4e-19
Identities = 60/152 (39%), Positives = 78/152 (51%), Gaps = 20/152 (13%)
Query: 27 RREPEPRAPQPDPCAA---------WLDSERGHYPSSDESSLETSPP--------DSSQR 69
+R+PEP P+P+P L + P E+ ET P DS
Sbjct: 51 QRDPEPE-PEPEPEGGRSRAGAQNDQLSTGPRAAPEEAETLAETEPERHLGSYLLDSENT 109
Query: 70 PSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVK 129
A P P + + +K+ R FS Q +ELER+F Q+YLSAPER LA L+LT TQVK
Sbjct: 110 SGALPRLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVK 169
Query: 130 IWFQNHRYKLKRARAPGAAESPDLAASAELHA 161
IWFQN RYK KR + ++E DL + L A
Sbjct: 170 IWFQNRRYKTKRKQL--SSELGDLEKHSSLPA 199
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 85.9 bits (211), Expect = 3e-17
Identities = 77/212 (36%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 32 PRAPQPDPC---AAWLDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKRR 88
PR P P AA L + RG ++E+S P ++ G ++KK R
Sbjct: 152 PRGPGPGAVQREAAEL-AARGPAAGTEEASELAEVPAAAGETRG---GVGVGGGRKKKTR 207
Query: 89 VLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPGAA 148
+FS++Q +LE F +RYLS+ ER LA+ L+LT TQVKIWFQN R K KR A
Sbjct: 208 TVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLA---- 263
Query: 149 ESPDLAASAELHAA----PGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCGAPPAA 204
AEL AA PG R V VPVL + P G P A
Sbjct: 264 --------AELEAASLSPPGAQRLVRVPVLYHESPPAAAAAG-------PPATLPFPLAP 308
Query: 205 ACPLPGYPAFGPGSALGLFPAYQHLASPALVS 236
A P P P G AL AY A PA S
Sbjct: 309 AAPAPPPPLLGFSGAL----AYPLAAFPAAAS 336
>gi|157743259 H6 family homeobox 3 [Homo sapiens]
Length = 357
Score = 84.3 bits (207), Expect = 8e-17
Identities = 72/206 (34%), Positives = 92/206 (44%), Gaps = 38/206 (18%)
Query: 27 RREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAE---- 82
R PEP + DP LDS+ +ES E S + P A AS G+ A
Sbjct: 151 RDSPEPLL-KADPDHKELDSKSPDEIILEESDSEESKKEGEAAPGAAGASVGAAAATPGA 209
Query: 83 ----------------KRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPT 126
++KK R +FS++Q +LE F +RYLS+ ER LA+ L LT T
Sbjct: 210 EDWKKGAESPEKKPACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTET 269
Query: 127 QVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGG 186
QVKIWFQN R K KR A +L A+ HAA R V VP+L + G
Sbjct: 270 QVKIWFQNRRNKWKRQLA------AELEAANLSHAA--AQRIVRVPILYHENSAAEG--- 318
Query: 187 GEVGTAAAQEKCGAPPAAACPLPGYP 212
AA GAP + PL +P
Sbjct: 319 ------AAAAAAGAPVPVSQPLLTFP 338
>gi|70608170 H6 family homeobox 2 [Homo sapiens]
Length = 273
Score = 83.2 bits (204), Expect = 2e-16
Identities = 74/223 (33%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 23 QHLPRRE-PEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPDSSQR-------PSARP 74
QH P+ + P+ P P PC G P E + SP S + P+ P
Sbjct: 70 QHGPKEQGPKHHPPIPFPCLGTPKGSGGSGPGGLERTPFLSPSHSDFKEEKERLLPAGSP 129
Query: 75 ASPGSDAEK-----------RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRL 123
SPGS+ + +KK R +FS++Q +LE F +RYLS+ ER LAS L+L
Sbjct: 130 -SPGSERPRDGGAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQL 188
Query: 124 TPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGG 183
T TQVK WFQN R K KR S +L A+ HA+ L V +P++ RD
Sbjct: 189 TETQVKTWFQNRRNKWKRQL------SAELEAANMAHASAQTL--VSMPLVFRD------ 234
Query: 184 GGGGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPAY 226
++ + P + A P P Y PGS L P Y
Sbjct: 235 ---------SSLLRVPVPRSLAFPAPLY---YPGSNLSALPLY 265
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 79.7 bits (195), Expect = 2e-15
Identities = 75/218 (34%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 26 PRREPEPRAPQPDPCAAWLDSERGHYPSSDESS---LETSPPDSSQRPSARPASPGSDAE 82
P R PEP + + P +S P ++ T+P ++ + GSD++
Sbjct: 34 PTRPPEPPSTRQRPPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSK 93
Query: 83 KRKKRRV--LFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLK 140
K RR F+ Q + LE +F+ RYLS ER LA L LT TQVKIWFQN R K K
Sbjct: 94 SGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 153
Query: 141 RARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCGA 200
+ + PGA D +A PG G G G G + + GA
Sbjct: 154 K-QNPGA----DTSAPTGGGGGPG------------PGAGPGTGLPGGLSPLSPSPPMGA 196
Query: 201 PPAAACPLPGYPAFGPGSALGLFPAYQ--HLASPALVS 236
P P GYPA GPG GL A Q L+SPA++S
Sbjct: 197 PLGMHGP-AGYPAHGPG---GLVCAAQLPFLSSPAVLS 230
>gi|4758168 distal-less homeobox 2 [Homo sapiens]
Length = 328
Score = 79.0 bits (193), Expect = 3e-15
Identities = 56/163 (34%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 61 TSPPDSSQRPSARPASP-----GSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPERE 115
TS ++ P P +K +K R ++S Q L+RRF++ +YL+ PER
Sbjct: 124 TSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA 183
Query: 116 QLASLLRLTPTQVKIWFQNHRYKLKRARAPG---AAESPDLAASAELHAAPGLLRRVVVP 172
+LA+ L LT TQVKIWFQN R K K+ G + + P +AS + P V P
Sbjct: 184 ELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPP-----VSAP 238
Query: 173 VLVRDGQP---CGGGGGGEVGTAAAQEKCGAPPAAACPLPGYP 212
G P GGGG G G+ A AA+ L YP
Sbjct: 239 ASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYP 281
>gi|118582284 msh homeobox 1 [Homo sapiens]
Length = 303
Score = 78.6 bits (192), Expect = 5e-15
Identities = 69/192 (35%), Positives = 86/192 (44%), Gaps = 51/192 (26%)
Query: 9 FTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPDSSQ 68
F+V LL LPE DA L + E P P+ P W+ S R SPP
Sbjct: 118 FSVGGLLKLPE-DA--LVKAE-SPEKPERTP---WMQSPR------------FSPP---- 154
Query: 69 RPSARPASPGSDAEKRK---KRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTP 125
P+ R + P K K K R F+ AQ L LER+FRQ++YLS ER + +S L LT
Sbjct: 155 -PARRLSPPACTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTE 213
Query: 126 TQVKIWFQNHRYKLKRARAP------------------------GAAESPDLAASAELHA 161
TQVKIWFQN R K KR + G + AA A L+
Sbjct: 214 TQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYG 273
Query: 162 APGLLRRVVVPV 173
A G +R +PV
Sbjct: 274 ASGPFQRAALPV 285
>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
Length = 284
Score = 78.2 bits (191), Expect = 6e-15
Identities = 54/138 (39%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 43 WLDSERGHYPSSDESSLETSPPDSSQR---PSARPASPGSDAEKRKKRRVLFSKAQTLEL 99
W+DS R + D + SP ++R P P KRKK R FS++Q LEL
Sbjct: 120 WMDSGRRF--AKDRLTAALSPFSGTRRIGHPYQNRTPP-----KRKKPRTSFSRSQVLEL 172
Query: 100 ERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAEL 159
ERRF +Q+YL++ ER LA LR+T QVK WFQN R K +R A A L
Sbjct: 173 ERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLL 232
Query: 160 HAAPGLLRRVVVPVLVRD 177
H L R + P L D
Sbjct: 233 HLQQDALPRPLRPPLPPD 250
Score = 27.7 bits (60), Expect = 9.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 182 GGGGGGEVGTAAAQEKCGA---PPAAACPLPGYPAFGPGSALGLFPAYQHLASP 232
GG G GE G + + P + PLPG GPG + + PA++ L P
Sbjct: 40 GGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVGPGGVIRV-PAHRPLPVP 92
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 77.4 bits (189), Expect = 1e-14
Identities = 70/220 (31%), Positives = 94/220 (42%), Gaps = 46/220 (20%)
Query: 19 EQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPP--DSSQRP-SARPA 75
E+DA+ +PR P+ AA L P + +L + P D P + P
Sbjct: 92 EEDAE-------DPRRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPG 144
Query: 76 SPGSDAEKRKK----------RRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTP 125
SPGS +R++ R F+ Q + LE +FR RYLS ER LA L LT
Sbjct: 145 SPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTE 204
Query: 126 TQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGG 185
TQVKIWFQN R K K+ + PGA + + A A G GGGG
Sbjct: 205 TQVKIWFQNRRTKWKK-QNPGADGAAQVGGGAPQPGAAG-----------------GGGG 246
Query: 186 GGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPA 225
GG G+ G P A +P++ + LFP+
Sbjct: 247 GGSGGSP------GPPGTGALHFQTFPSYSAANV--LFPS 278
Score = 35.4 bits (80), Expect = 0.044
Identities = 50/186 (26%), Positives = 68/186 (36%), Gaps = 65/186 (34%)
Query: 6 RLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPD 65
++SF+V +LD + LP P PR + + + E G SS + + PD
Sbjct: 17 KISFSVLDILDPQKFTRAALPAVRPAPREAR----KSLAEVEAGKDASSRDPVRQLETPD 72
Query: 66 SSQRPSARPASP--GSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRL 123
++ P A ASP GS+AE+ + E RR R RE+ A LL
Sbjct: 73 AA-GPGAGQASPLEGSEAEEE----------EDAEDPRRPRL--------RERAARLL-- 111
Query: 124 TPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGG 183
PG A SPD A A + G+PC
Sbjct: 112 ---------------------PGLARSPDAPAGA-----------------LASGEPCED 133
Query: 184 GGGGEV 189
GGGG V
Sbjct: 134 GGGGPV 139
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 77.4 bits (189), Expect = 1e-14
Identities = 70/220 (31%), Positives = 94/220 (42%), Gaps = 46/220 (20%)
Query: 19 EQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPP--DSSQRP-SARPA 75
E+DA+ +PR P+ AA L P + +L + P D P + P
Sbjct: 114 EEDAE-------DPRRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPG 166
Query: 76 SPGSDAEKRKK----------RRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTP 125
SPGS +R++ R F+ Q + LE +FR RYLS ER LA L LT
Sbjct: 167 SPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTE 226
Query: 126 TQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGG 185
TQVKIWFQN R K K+ + PGA + + A A G GGGG
Sbjct: 227 TQVKIWFQNRRTKWKK-QNPGADGAAQVGGGAPQPGAAG-----------------GGGG 268
Query: 186 GGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPA 225
GG G+ G P A +P++ + LFP+
Sbjct: 269 GGSGGSP------GPPGTGALHFQTFPSYSAANV--LFPS 300
Score = 29.3 bits (64), Expect = 3.2
Identities = 48/187 (25%), Positives = 66/187 (35%), Gaps = 45/187 (24%)
Query: 6 RLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDE--SSLETSP 63
++SF+V +LD + LP P PR + + + E G SS + LET
Sbjct: 17 KISFSVLDILDPQKFTRAALPAVRPAPREAR----KSLAEVEAGKDASSRDPVRQLETPG 72
Query: 64 PDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRL 123
+ R A P ++ R +A LE S E E+ A R
Sbjct: 73 QGFAASLLTRQAHPHHSSDARDAAGPGAGQASPLE----------GSEAEEEEDAEDPR- 121
Query: 124 TPTQVKIWFQNHRYKLKRAR-APGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCG 182
R + + AR PG A SPD A A + G+PC
Sbjct: 122 ----------RPRLRERAARLLPGLARSPDAPAGA-----------------LASGEPCE 154
Query: 183 GGGGGEV 189
GGGG V
Sbjct: 155 DGGGGPV 161
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 77.4 bits (189), Expect = 1e-14
Identities = 75/213 (35%), Positives = 93/213 (43%), Gaps = 37/213 (17%)
Query: 28 REPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKR 87
RE P AP P AA T+P ++ + GSD++ K R
Sbjct: 616 RENSPVAPGPPGGAA------------APGGAGTTPQGTATAAKPKRKRTGSDSKSGKPR 663
Query: 88 RV--LFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAP 145
R F+ Q + LE +F+ RYLS ER LA L LT TQVKIWFQN R K K+ + P
Sbjct: 664 RARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNP 722
Query: 146 GAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCGAPPAAA 205
GA D +A PG G G G G + + GAP
Sbjct: 723 GA----DTSAPTGGGGGPG------------PGAGPGTGLPGGLSPLSPSPPMGAPLGMH 766
Query: 206 CPLPGYPAFGPGSALGLFPAYQ--HLASPALVS 236
P GYPA GPG GL A Q L+SPA++S
Sbjct: 767 GP-AGYPAHGPG---GLVCAAQLPFLSSPAVLS 795
>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 77.4 bits (189), Expect = 1e-14
Identities = 70/220 (31%), Positives = 94/220 (42%), Gaps = 46/220 (20%)
Query: 19 EQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPP--DSSQRP-SARPA 75
E+DA+ +PR P+ AA L P + +L + P D P + P
Sbjct: 114 EEDAE-------DPRRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPG 166
Query: 76 SPGSDAEKRKK----------RRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTP 125
SPGS +R++ R F+ Q + LE +FR RYLS ER LA L LT
Sbjct: 167 SPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTE 226
Query: 126 TQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGG 185
TQVKIWFQN R K K+ + PGA + + A A G GGGG
Sbjct: 227 TQVKIWFQNRRTKWKK-QNPGADGAAQVGGGAPQPGAAG-----------------GGGG 268
Query: 186 GGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPA 225
GG G+ G P A +P++ + LFP+
Sbjct: 269 GGSGGSP------GPPGTGALHFQTFPSYSAANV--LFPS 300
Score = 29.3 bits (64), Expect = 3.2
Identities = 48/187 (25%), Positives = 66/187 (35%), Gaps = 45/187 (24%)
Query: 6 RLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDE--SSLETSP 63
++SF+V +LD + LP P PR + + + E G SS + LET
Sbjct: 17 KISFSVLDILDPQKFTRAALPAVRPAPREAR----KSLAEVEAGKDASSRDPVRQLETPG 72
Query: 64 PDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRL 123
+ R A P ++ R +A LE S E E+ A R
Sbjct: 73 QGFAASLLTRQAHPHHSSDARDAAGPGAGQASPLE----------GSEAEEEEDAEDPR- 121
Query: 124 TPTQVKIWFQNHRYKLKRAR-APGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCG 182
R + + AR PG A SPD A A + G+PC
Sbjct: 122 ----------RPRLRERAARLLPGLARSPDAPAGA-----------------LASGEPCE 154
Query: 183 GGGGGEV 189
GGGG V
Sbjct: 155 DGGGGPV 161
>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 77.4 bits (189), Expect = 1e-14
Identities = 70/220 (31%), Positives = 94/220 (42%), Gaps = 46/220 (20%)
Query: 19 EQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPP--DSSQRP-SARPA 75
E+DA+ +PR P+ AA L P + +L + P D P + P
Sbjct: 114 EEDAE-------DPRRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPG 166
Query: 76 SPGSDAEKRKK----------RRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTP 125
SPGS +R++ R F+ Q + LE +FR RYLS ER LA L LT
Sbjct: 167 SPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTE 226
Query: 126 TQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGG 185
TQVKIWFQN R K K+ + PGA + + A A G GGGG
Sbjct: 227 TQVKIWFQNRRTKWKK-QNPGADGAAQVGGGAPQPGAAG-----------------GGGG 268
Query: 186 GGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPA 225
GG G+ G P A +P++ + LFP+
Sbjct: 269 GGSGGSP------GPPGTGALHFQTFPSYSAANV--LFPS 300
Score = 29.3 bits (64), Expect = 3.2
Identities = 48/187 (25%), Positives = 66/187 (35%), Gaps = 45/187 (24%)
Query: 6 RLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWLDSERGHYPSSDE--SSLETSP 63
++SF+V +LD + LP P PR + + + E G SS + LET
Sbjct: 17 KISFSVLDILDPQKFTRAALPAVRPAPREAR----KSLAEVEAGKDASSRDPVRQLETPG 72
Query: 64 PDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRL 123
+ R A P ++ R +A LE S E E+ A R
Sbjct: 73 QGFAASLLTRQAHPHHSSDARDAAGPGAGQASPLE----------GSEAEEEEDAEDPR- 121
Query: 124 TPTQVKIWFQNHRYKLKRAR-APGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCG 182
R + + AR PG A SPD A A + G+PC
Sbjct: 122 ----------RPRLRERAARLLPGLARSPDAPAGA-----------------LASGEPCE 154
Query: 183 GGGGGEV 189
GGGG V
Sbjct: 155 DGGGGPV 161
>gi|63054872 ladybird homeobox 1 [Homo sapiens]
Length = 281
Score = 77.4 bits (189), Expect = 1e-14
Identities = 56/152 (36%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 82 EKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKR 141
+KR+K R F+ Q ELE+RF Q+YLS +R+Q+A L LT QV WFQN R KLKR
Sbjct: 123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKR 182
Query: 142 ARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCGAP 201
A+ SA+ G + V + L ++ + GGGG G A+ + G+P
Sbjct: 183 DLEEMKAD----VESAKKLGPSGQMDIVALAELEQNSEATAGGGG---GCGRAKSRPGSP 235
Query: 202 PAAACPLPGYPAFGPGSALGLFPAYQHLASPA 233
PG P AL L PA PA
Sbjct: 236 VLP----PGAPKAPGAGALQLSPASPLTDQPA 263
>gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens]
Length = 255
Score = 77.0 bits (188), Expect = 1e-14
Identities = 59/168 (35%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 43 WLDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKR-----------------K 85
+++S H S SS++ S P S+ +R PG+D+EK +
Sbjct: 71 YVNSVSSHASSPYISSVQ-SYPGSASLAQSRLEDPGADSEKSTVVEGGEVRFNGKGKKIR 129
Query: 86 KRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAP 145
K R ++S Q L RRF+Q +YL+ PER +LA+ L LT TQVKIWFQN R K K+
Sbjct: 130 KPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQ 189
Query: 146 GAA--ESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVGT 191
G A E LA L A VP G G GG G+
Sbjct: 190 GGAALEGSALANGRALSAG-----SPPVPPGWNPNSSSGKGSGGNAGS 232
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 77.0 bits (188), Expect = 1e-14
Identities = 67/180 (37%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 61 TSPPDSSQRPSARPASPGSDAEKRKKRRV--LFSKAQTLELERRFRQQRYLSAPEREQLA 118
T+P ++ + GSD++ K RR F+ Q + LE +F+ RYLS ER LA
Sbjct: 234 TTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLA 293
Query: 119 SLLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDG 178
L LT TQVKIWFQN R K K+ + PGA D +A PG G
Sbjct: 294 LSLSLTETQVKIWFQNRRTKWKK-QNPGA----DTSAPTGGGGGPG------------PG 336
Query: 179 QPCGGGGGGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPAYQ--HLASPALVS 236
G G G + + GAP P GYPA GPG GL A Q L+SPA++S
Sbjct: 337 AGPGTGLPGGLSPLSPSPPMGAPLGMHGP-AGYPAHGPG---GLVCAAQLPFLSSPAVLS 392
>gi|4504465 homeobox B2 [Homo sapiens]
Length = 356
Score = 75.9 bits (185), Expect = 3e-14
Identities = 70/222 (31%), Positives = 91/222 (40%), Gaps = 36/222 (16%)
Query: 20 QDAQHLPRREPEPR-APQPDPCAAWLDSERGHYPSSDESSLETSP-PDSSQRPSARPASP 77
+D LP P P A P P W+ ++ + S TSP P +S P++ SP
Sbjct: 73 EDGPALPPPPPPPLPAAPPAPEFPWMKEKKS---AKKPSQSATSPSPAASAVPASGVGSP 129
Query: 78 G-------SDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKI 130
+ ++ R ++ Q LELE+ F +YL P R ++A+LL LT QVK+
Sbjct: 130 ADGLGLPEAGGGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKV 189
Query: 131 WFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGEVG 190
WFQN R K KR E PD A PG L + P P GG
Sbjct: 190 WFQNRRMKHKRQTQ--HREPPDGEP-----ACPGALEDICDPAEEPAASP-----GGPSA 237
Query: 191 TAAAQEKCGAPPAA------------ACPLPGYPAFGPGSAL 220
+ AA E C PP A L G A PG AL
Sbjct: 238 SRAAWEACCHPPEVVPGALSADPRPLAVRLEGAGASSPGCAL 279
>gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens]
Length = 168
Score = 74.3 bits (181), Expect = 9e-14
Identities = 61/180 (33%), Positives = 81/180 (45%), Gaps = 42/180 (23%)
Query: 63 PPDSSQ-RPSARPAS--PGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLAS 119
PPDS + R S P+ P + A+K +K R ++S Q L +RF+ +YL+ PER QLA+
Sbjct: 21 PPDSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAA 80
Query: 120 LLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQ 179
L LT TQVKIWFQN R K K+ LL+ Q
Sbjct: 81 QLGLTQTQVKIWFQNKRSKYKK-----------------------LLK-----------Q 106
Query: 180 PCGGGGGGEVGTAAAQEKCGAPPAAACPLP---GYPAFGPGSALGLFPAYQHLASPALVS 236
GG G G + C P + LP P G G++ G + YQH +S L S
Sbjct: 107 NSGGQEGDFPGRTFSVSPCSPPLPSLWDLPKAGTLPTSGYGNSFGAW--YQHHSSDVLAS 164
>gi|45593144 gastrulation brain homeo box 2 [Homo sapiens]
Length = 348
Score = 74.3 bits (181), Expect = 9e-14
Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 44 LDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRF 103
L + H +LE +PP S S + K ++RR F+ Q LELE+ F
Sbjct: 213 LTGQAAHKEEDPGHALEETPPSSGAAGST------TSTGKNRRRRTAFTSEQLLELEKEF 266
Query: 104 RQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPGA 147
++YLS ER Q+A L+L+ QVKIWFQN R K KR +A A
Sbjct: 267 HCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNA 310
>gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens]
Length = 240
Score = 73.6 bits (179), Expect = 1e-13
Identities = 60/184 (32%), Positives = 80/184 (43%), Gaps = 41/184 (22%)
Query: 56 ESSLETSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPERE 115
E ++ P S PS R P + A+K +K R ++S Q L +RF+ +YL+ PER
Sbjct: 91 ELEADSEKPRLSPEPSER--RPQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERA 148
Query: 116 QLASLLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLV 175
QLA+ L LT TQVKIWFQN R K K+ LL+
Sbjct: 149 QLAAQLGLTQTQVKIWFQNKRSKYKK-----------------------LLK-------- 177
Query: 176 RDGQPCGGGGGGEVGTAAAQEKCGAPPAAACPLP---GYPAFGPGSALGLFPAYQHLASP 232
Q GG G G + C P + LP P G G++ G + YQH +S
Sbjct: 178 ---QNSGGQEGDFPGRTFSVSPCSPPLPSLWDLPKAGTLPTSGYGNSFGAW--YQHHSSD 232
Query: 233 ALVS 236
L S
Sbjct: 233 VLAS 236
>gi|147901462 brain specific homeobox [Homo sapiens]
Length = 233
Score = 72.0 bits (175), Expect = 4e-13
Identities = 48/121 (39%), Positives = 64/121 (52%), Gaps = 13/121 (10%)
Query: 83 KRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKR- 141
+R+K R +FS +Q LE+RF QRYLS PER +LA+ L L+ TQVK WFQN R K K+
Sbjct: 109 RRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ 168
Query: 142 -------ARAPGAAESPDLAASAELHAAPGLLRRVVVP----VLVRDGQPCGGGGGGEVG 190
+AP ESP+ + AA R+ +P VL G GE+G
Sbjct: 169 LRKSQDEPKAPDGPESPE-GSPRGSEAATAAEARLSLPAGPFVLTEPEDEVDIGDEGELG 227
Query: 191 T 191
+
Sbjct: 228 S 228
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,223,286
Number of Sequences: 37866
Number of extensions: 725969
Number of successful extensions: 6685
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 5680
Number of HSP's gapped (non-prelim): 1215
length of query: 239
length of database: 18,247,518
effective HSP length: 99
effective length of query: 140
effective length of database: 14,498,784
effective search space: 2029829760
effective search space used: 2029829760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.