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Search of human proteins with 31317243
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31317243 interleukin 22-binding protein isoform 3 [Homo
sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens] 281 1e-76
gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens] 272 6e-74
gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens] 255 6e-69
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens] 90 6e-19
gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens] 83 5e-17
gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens] 55 1e-08
gi|28416911 interleukin 28 receptor, alpha isoform 3 [Homo sapiens] 55 1e-08
gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens] 55 1e-08
gi|4503641 coagulation factor III precursor [Homo sapiens] 55 2e-08
gi|222136575 interleukin 10 receptor, alpha precursor [Homo sapi... 52 2e-07
gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens] 41 2e-04
gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens] 40 4e-04
gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens] 30 0.71
gi|46488937 interferon alpha/beta receptor 2 isoform a precursor... 29 0.92
gi|46488935 interferon alpha/beta receptor 2 isoform b precursor... 29 0.92
gi|19923129 interferon alpha/beta receptor 2 isoform b precursor... 29 0.92
gi|22212918 ciliary neurotrophic factor receptor preproprotein [... 29 0.92
gi|47419934 interferon gamma receptor 2 precursor [Homo sapiens] 29 0.92
gi|4502931 ciliary neurotrophic factor receptor preproprotein [H... 29 0.92
gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens] 27 4.6
gi|239753591 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6
gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens] 27 4.6
gi|239744229 PREDICTED: similar to hCG2038970 [Homo sapiens] 27 4.6
gi|4507157 sortilin-related receptor containing LDLR class A rep... 27 4.6
gi|4504673 interleukin 6 receptor isoform 1 precursor [Homo sapi... 27 6.0
gi|31317249 interleukin 6 receptor isoform 2 precursor [Homo sap... 27 6.0
gi|13540527 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 27 6.0
gi|118601070 hypothetical protein LOC158724 [Homo sapiens] 26 7.8
gi|22748693 hypothetical protein LOC120534 [Homo sapiens] 26 7.8
>gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens]
Length = 130
Score = 281 bits (719), Expect = 1e-76
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY 60
MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY
Sbjct: 1 MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY 60
Query: 61 FVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRF 120
FVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRF
Sbjct: 61 FVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRF 120
Query: 121 TPWWERAKGL 130
TPWWERAKGL
Sbjct: 121 TPWWERAKGL 130
>gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens]
Length = 231
Score = 272 bits (695), Expect = 6e-74
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY 60
MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY
Sbjct: 1 MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY 60
Query: 61 FVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRF 120
FVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRF
Sbjct: 61 FVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRF 120
Query: 121 TPWWE 125
TPWWE
Sbjct: 121 TPWWE 125
>gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]
Length = 263
Score = 255 bits (652), Expect = 6e-69
Identities = 125/157 (79%), Positives = 125/157 (79%), Gaps = 32/157 (20%)
Query: 1 MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY 60
MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY
Sbjct: 1 MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY 60
Query: 61 FVQYKI--------------------------------YGQRQWKNKEDCWGTQELSCDL 88
FVQYKI YGQRQWKNKEDCWGTQELSCDL
Sbjct: 61 FVQYKIMFSCSMKSSHQKPSGCWQHISCNFPGCRTLAKYGQRQWKNKEDCWGTQELSCDL 120
Query: 89 TSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWE 125
TSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWE
Sbjct: 121 TSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWE 157
>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
Length = 553
Score = 89.7 bits (221), Expect = 6e-19
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 30 KPQRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLT 89
KP + F S N N+LQW P L G Y VQY IYGQ++W NK +C CDL+
Sbjct: 39 KPANITFLSINMKNVLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLS 98
Query: 90 SETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWERAKG 129
+ETSD + YY +V+A S+W+ + RF P+ E G
Sbjct: 99 AETSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFLETQIG 138
>gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
Length = 574
Score = 83.2 bits (204), Expect = 5e-17
Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 32 QRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSE 91
Q V+FQS NF NIL W G T ++ VY ++YK YG+R W K+ C SC+LT E
Sbjct: 26 QHVKFQSSNFENILTWDSGPEGTPDT-VYSIEYKTYGERDWVAKKGCQRITRKSCNLTVE 84
Query: 92 TSDIQEPYYGRVRAASAGSYSEWSMTPRFT 121
T ++ E YY RV A SAG S MT RF+
Sbjct: 85 TGNLTELYYARVTAVSAGGRSATKMTDRFS 114
>gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens]
Length = 520
Score = 55.5 bits (132), Expect = 1e-08
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS--VYFVQYKIYG-QRQWKNKEDCWGTQELSCD 87
PQ V S+NF L W PG GN YFV Y+ +R+W+ E+C GT+EL C
Sbjct: 27 PQNVTLLSQNFSVYLTWLPG---LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCS 83
Query: 88 LTS-ETSDIQEPYYGRVRAASAGSYSEW 114
+ + D+ + GRVR S S S W
Sbjct: 84 MMCLKKQDLYNKFKGRVRTVSPSSKSPW 111
>gi|28416911 interleukin 28 receptor, alpha isoform 3 [Homo sapiens]
Length = 244
Score = 55.5 bits (132), Expect = 1e-08
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS--VYFVQYKIYG-QRQWKNKEDCWGTQELSCD 87
PQ V S+NF L W PG GN YFV Y+ +R+W+ E+C GT+EL C
Sbjct: 27 PQNVTLLSQNFSVYLTWLPG---LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCS 83
Query: 88 LTS-ETSDIQEPYYGRVRAASAGSYSEW 114
+ + D+ + GRVR S S S W
Sbjct: 84 MMCLKKQDLYNKFKGRVRTVSPSSKSPW 111
>gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens]
Length = 491
Score = 55.5 bits (132), Expect = 1e-08
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS--VYFVQYKIYG-QRQWKNKEDCWGTQELSCD 87
PQ V S+NF L W PG GN YFV Y+ +R+W+ E+C GT+EL C
Sbjct: 27 PQNVTLLSQNFSVYLTWLPG---LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCS 83
Query: 88 LTS-ETSDIQEPYYGRVRAASAGSYSEW 114
+ + D+ + GRVR S S S W
Sbjct: 84 MMCLKKQDLYNKFKGRVRTVSPSSKSPW 111
>gi|4503641 coagulation factor III precursor [Homo sapiens]
Length = 295
Score = 54.7 bits (130), Expect = 2e-08
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 11 LISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQR 70
L+ + VAG T ++ + ++S NF IL+W+P + VY VQ
Sbjct: 21 LLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPKPV----NQVYTVQIST-KSG 75
Query: 71 QWKNKEDCWGTQELSCDLTSE-TSDIQEPYYGRVRAASAGSYSE--------WSMTPRFT 121
WK+K C+ T + CDLT E D+++ Y RV + AG+ + +P FT
Sbjct: 76 DWKSK--CFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFT 133
Query: 122 PWWERAKG 129
P+ E G
Sbjct: 134 PYLETNLG 141
>gi|222136575 interleukin 10 receptor, alpha precursor [Homo
sapiens]
Length = 578
Score = 51.6 bits (122), Expect = 2e-07
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 1 MMPKHCFLGFLISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVY 60
M+P C + L + + E P V F++ FH+IL W P S+ Y
Sbjct: 1 MLP--CLVVLLAALLSLRLGSDAHGTELPSPPSVWFEAEFFHHILHWTP-IPNQSESTCY 57
Query: 61 FVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDI--QEPYYGRVRAASAGSYSEWSMT 117
V YG W + +C +Q LS DLT+ T D+ Y RVRA +S W++T
Sbjct: 58 EVALLRYGIESWNSISNC--SQTLSYDLTAVTLDLYHSNGYRARVRAVDGSRHSNWTVT 114
>gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens]
Length = 325
Score = 41.2 bits (95), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 31 PQRVQFQSRNFHNILQWQPGRALTGN--SSVYFVQYKIYGQRQWKNKEDCWGTQELSCDL 88
P+ V+ S NF NILQW+ GN + ++ Y+I+ ++ C T CD
Sbjct: 24 PENVRMNSVNFKNILQWESPAFAKGNLTFTAQYLSYRIF-------QDKCMNTTLTECDF 76
Query: 89 TSETSDIQEPYYG----RVRAASAGSYSEW 114
+S + YG RVRA A +S+W
Sbjct: 77 SSLSK------YGDHTLRVRAEFADEHSDW 100
>gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens]
Length = 311
Score = 40.4 bits (93), Expect = 4e-04
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 31 PQRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYK-----IYGQRQWKNKEDCWGTQELS 85
PQ + S N ++L W P A G + Y V+Y+ +Y W C T+
Sbjct: 38 PQNLSVLSTNMKHLLMWSPVIA-PGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPE 96
Query: 86 CDLTSETSDIQEPYYGRVRAASAGSYSEWSM 116
CD+T + + PY RVRA S WS+
Sbjct: 97 CDVTDDIT-ATVPYNLRVRATLGSQTSAWSI 126
>gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens]
Length = 489
Score = 29.6 bits (65), Expect = 0.71
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Query: 10 FLISFFLTGVAGTQSTHESLKPQ------RVQFQSRNFHNILQWQPGRALTGNSSVYFVQ 63
FL+ + GV+ + L P V +S N + I+ W+ + V+ V+
Sbjct: 5 FLLPLVMQGVSRAEMGTADLGPSSVPTPTNVTIESYNMNPIVYWE--YQIMPQVPVFTVE 62
Query: 64 YKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRF 120
K YG + + + C C+++ D + RV+A S ++ + F
Sbjct: 63 VKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEF 119
>gi|46488937 interferon alpha/beta receptor 2 isoform a precursor
[Homo sapiens]
Length = 515
Score = 29.3 bits (64), Expect = 0.92
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 39 RNFHNILQWQPGRALTGNSSV---YFVQYKIYGQRQ-WKNKEDCWGTQELSCDLTSETSD 94
RNF +IL W+ L +S V Y + Y I + + K ++C T CDLT E
Sbjct: 46 RNFRSILSWE----LKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRS 101
Query: 95 IQEPY 99
E Y
Sbjct: 102 THEAY 106
>gi|46488935 interferon alpha/beta receptor 2 isoform b precursor
[Homo sapiens]
Length = 331
Score = 29.3 bits (64), Expect = 0.92
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 39 RNFHNILQWQPGRALTGNSSV---YFVQYKIYGQRQ-WKNKEDCWGTQELSCDLTSETSD 94
RNF +IL W+ L +S V Y + Y I + + K ++C T CDLT E
Sbjct: 46 RNFRSILSWE----LKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRS 101
Query: 95 IQEPY 99
E Y
Sbjct: 102 THEAY 106
>gi|19923129 interferon alpha/beta receptor 2 isoform b precursor
[Homo sapiens]
Length = 331
Score = 29.3 bits (64), Expect = 0.92
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 39 RNFHNILQWQPGRALTGNSSV---YFVQYKIYGQRQ-WKNKEDCWGTQELSCDLTSETSD 94
RNF +IL W+ L +S V Y + Y I + + K ++C T CDLT E
Sbjct: 46 RNFRSILSWE----LKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRS 101
Query: 95 IQEPY 99
E Y
Sbjct: 102 THEAY 106
>gi|22212918 ciliary neurotrophic factor receptor preproprotein
[Homo sapiens]
Length = 372
Score = 29.3 bits (64), Expect = 0.92
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 60 YFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPR 119
+F++Y+ QW++ E GT D + I + + G++S+WS+
Sbjct: 242 FFLRYRPLILDQWQHVELSDGTAHTITDAYAGKEYIIQV---AAKDNEIGTWSDWSVAAH 298
Query: 120 FTPWWERAKGL 130
TPW E + L
Sbjct: 299 ATPWTEEPRHL 309
>gi|47419934 interferon gamma receptor 2 precursor [Homo sapiens]
Length = 337
Score = 29.3 bits (64), Expect = 0.92
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 16/103 (15%)
Query: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS---VYFVQYKIYGQRQWKNKE------DCWGT 81
PQ + + N +L W+P NS+ VY VQ+K Y +W + +C
Sbjct: 33 PQHPKIRLYNAEQVLSWEP--VALSNSTRPVVYQVQFK-YTDSKWFTADIMSIGVNCTQI 89
Query: 82 QELSCDLTSETSDIQEP----YYGRVRAASAGSYSEWSMTPRF 120
CD T+ + P R+RA +S W P F
Sbjct: 90 TATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTMPWF 132
>gi|4502931 ciliary neurotrophic factor receptor preproprotein [Homo
sapiens]
Length = 372
Score = 29.3 bits (64), Expect = 0.92
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 60 YFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPR 119
+F++Y+ QW++ E GT D + I + + G++S+WS+
Sbjct: 242 FFLRYRPLILDQWQHVELSDGTAHTITDAYAGKEYIIQV---AAKDNEIGTWSDWSVAAH 298
Query: 120 FTPWWERAKGL 130
TPW E + L
Sbjct: 299 ATPWTEEPRHL 309
>gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens]
Length = 915
Score = 26.9 bits (58), Expect = 4.6
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 47 WQPGRALTGNSSVYFVQYKIYGQRQWKNK--EDCWGTQELSCDLTSETSDIQEPYYGRVR 104
W G +L G + + V + + + W NK +C G + LS T S + EP G R
Sbjct: 438 WPAGVSLQGGHTQHVV-CRGHSELNWGNKGLRNC-GEKPLS-QRTCTVSMLSEPPQGHWR 494
Query: 105 AASAGSYSEWSMTPRFTPWWERAKG 129
Y + FT W+ +G
Sbjct: 495 RQPGSGYPRSAGVTAFTLMWKLCRG 519
>gi|239753591 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 26.9 bits (58), Expect = 4.6
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 68 GQRQWKNKED--CWGTQELSCD 87
G+RQW + CWG + SCD
Sbjct: 76 GERQWPHPTPGTCWGRSDTSCD 97
>gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens]
Length = 821
Score = 26.9 bits (58), Expect = 4.6
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 47 WQPGRALTGNSSVYFVQYKIYGQRQWKNK--EDCWGTQELSCDLTSETSDIQEPYYGRVR 104
W G +L G + + V + + + W NK +C G + LS T S + EP G R
Sbjct: 438 WPAGVSLQGGHTQHVV-CRGHSELNWGNKGLRNC-GEKPLS-QRTCTVSMLSEPPQGHWR 494
Query: 105 AASAGSYSEWSMTPRFTPWWERAKG 129
Y + FT W+ +G
Sbjct: 495 RQPGSGYPRSAGVTAFTLMWKLCRG 519
>gi|239744229 PREDICTED: similar to hCG2038970 [Homo sapiens]
Length = 904
Score = 26.9 bits (58), Expect = 4.6
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 47 WQPGRALTGNSSVYFVQYKIYGQRQWKNK--EDCWGTQELSCDLTSETSDIQEPYYGRVR 104
W G +L G + + V + + + W NK +C G + LS T S + EP G R
Sbjct: 438 WPAGVSLQGGHTQHVV-CRGHSELNWGNKGLRNC-GEKPLS-QRTCTVSMLSEPPQGHWR 494
Query: 105 AASAGSYSEWSMTPRFTPWWERAKG 129
Y + FT W+ +G
Sbjct: 495 RQPGSGYPRSAGVTAFTLMWKLCRG 519
>gi|4507157 sortilin-related receptor containing LDLR class A repeats
preproprotein [Homo sapiens]
Length = 2214
Score = 26.9 bits (58), Expect = 4.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 45 LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKE 76
L W + + S VY V Y++ G+ WK E
Sbjct: 1573 LTWMRPKKMPSASCVYNVYYRVVGESIWKTLE 1604
>gi|4504673 interleukin 6 receptor isoform 1 precursor [Homo
sapiens]
Length = 468
Score = 26.6 bits (57), Expect = 6.0
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 56 NSSVYFVQYKIYGQRQWKNKEDCWGTQELS--CDLTSETSDIQEPYYGRVRAA-SAGSYS 112
NSS Y +++++ + + W ++L C + S ++ R + G +S
Sbjct: 245 NSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS 304
Query: 113 EWSMTPRFTPWWE 125
EWS TPW E
Sbjct: 305 EWSPEAMGTPWTE 317
>gi|31317249 interleukin 6 receptor isoform 2 precursor [Homo
sapiens]
Length = 365
Score = 26.6 bits (57), Expect = 6.0
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 56 NSSVYFVQYKIYGQRQWKNKEDCWGTQELS--CDLTSETSDIQEPYYGRVRAA-SAGSYS 112
NSS Y +++++ + + W ++L C + S ++ R + G +S
Sbjct: 245 NSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS 304
Query: 113 EWSMTPRFTPWWE 125
EWS TPW E
Sbjct: 305 EWSPEAMGTPWTE 317
>gi|13540527 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 4 [Homo
sapiens]
Length = 378
Score = 26.6 bits (57), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 15 FLTGVAGTQSTHESLKPQRVQFQSRNFHNILQW 47
FL GVAG+ Q + ++SR F +ILQW
Sbjct: 157 FLLGVAGSAPP-----AQLLAYESREFDDILQW 184
>gi|118601070 hypothetical protein LOC158724 [Homo sapiens]
Length = 791
Score = 26.2 bits (56), Expect = 7.8
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 70 RQWKNKEDCWGTQELSCDLTSETSD---IQEPYYGRVRAASAGSYSEWSMTPRFTPWWER 126
+++K ++C + S +L + D QE Y+GR + SY+ + ++ W+ +
Sbjct: 642 QKFKKVKECSSELKYSMELDEKDEDKFFSQEKYWGRKFHTPSNSYTAQRVKMKYGAWYLK 701
Query: 127 AK 128
K
Sbjct: 702 PK 703
>gi|22748693 hypothetical protein LOC120534 [Homo sapiens]
Length = 260
Score = 26.2 bits (56), Expect = 7.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 34 VQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDC 78
+Q S N +LQ + G L+GN+++ F KIY R ++ C
Sbjct: 31 LQELSSNDMLLLQLRTGMTLSGNNTICFHHVKIYIDRFEDLQKSC 75
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,170,462
Number of Sequences: 37866
Number of extensions: 198771
Number of successful extensions: 421
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 397
Number of HSP's gapped (non-prelim): 30
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.