Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IFNAR2 Sequence: fasta or formatted (331aa) NCBI GI: 46488935
Description:

interferon alpha/beta receptor 2 isoform b precursor

Referenced in:

Interferon

Other entries for this name:
alt mRNA [331aa] interferon alpha/beta receptor 2 isoform b precursor
alt prot [515aa] interferon alpha/beta receptor 2 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         13           1
 C cysteine            3.0         10           1
 D aspartate           3.6         12           1
 E glutamate           6.9         23           3
 F phenylalanine       5.1         17           1
 G glycine             3.9         13           2
 H histidine           2.7          9           1
 I isoleucine          7.9         26           2
 K lysine              5.7         19           2
 L leucine            10.9         36           2
 M methionine          1.8          6           1
 N asparagine          5.1         17           1
 P proline             4.5         15           2
 Q glutamine           2.4          8           1
 R arginine            2.7          9           1
 S serine             11.5         38           2
 T threonine           6.3         21           2
 V valine              6.6         22           2
 W tryptophan          1.8          6           1
 Y tyrosine            3.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon alpha/beta receptor 2 isoform b precursor... 
IFNAR2                1.000   interferon alpha/beta receptor 2 isoform b precursor...
IFNAR2                0.835   interferon alpha/beta receptor 2 isoform a precursor...
ITGB1                 0.028   integrin beta 1 isoform 1C-2 precursor 
IL20RA                0.028   interleukin 20 receptor, alpha 
IL22RA2               0.023   interleukin 22-binding protein isoform 2 
LOC100292686          0.019   PREDICTED: hypothetical protein 
LOC100287098          0.019   PREDICTED: hypothetical protein 
LOC100287098          0.019   PREDICTED: hypothetical protein XP_002342923 
ITGB1                 0.019   integrin beta 1 isoform 1C-1 precursor 
IL22RA1               0.019   interleukin 22 receptor, alpha 1 
NECAB1                0.019   N-terminal EF-hand calcium binding protein 1 
LOC100128260          0.017   PREDICTED: hCG_1742852 
LOC100128260          0.017   PREDICTED: hCG_1742852 
F3                    0.015   coagulation factor III precursor 
UTY                   0.015   tetratricopeptide repeat protein isoform 1 
BEND2                 0.014   BEN domain containing 2 
CD55                  0.012   decay accelerating factor for complement isoform 2 ...
LOC100288773          0.012   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.012   PREDICTED: hCG_1742852 
C16orf89              0.012   hypothetical protein LOC146556 isoform 1 
IL22RA2               0.012   interleukin 22-binding protein isoform 1 
SEPSECS               0.011   Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...
MAP3K15               0.009   mitogen-activated protein kinase kinase kinase 15 [...
IFNAR1                0.008   interferon-alpha receptor 1 precursor 
MASP1                 0.008   mannan-binding lectin serine protease 1 isoform 1 pr...
ANXA3                 0.008   annexin A3 
ZNF283                0.008   zinc finger protein 283 
USH2A                 0.006   usherin isoform B 
SEPN1                 0.006   selenoprotein N, 1 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press