Guide to the Human Genome
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Name: NRP2 Sequence: fasta or formatted (901aa) NCBI GI: 41872567
Description:

neuropilin 2 isoform 5 precursor

Referenced in:

Additional Genes in Development
Semaphorins

Other entries for this name:
alt prot [926aa] neuropilin 2 isoform 2 precursor
alt prot [906aa] neuropilin 2 isoform 4 precursor
alt prot [555aa] neuropilin 2 isoform 6 precursor
alt prot [931aa] neuropilin 2 isoform 1 precursor
alt prot [909aa] neuropilin 2 isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         52           2
 C cysteine            2.1         19           1
 D aspartate           6.1         55           2
 E glutamate           6.3         57           3
 F phenylalanine       4.0         36           1
 G glycine             7.7         69           2
 H histidine           2.7         24           1
 I isoleucine          5.5         50           2
 K lysine              4.2         38           2
 L leucine             8.0         72           2
 M methionine          2.0         18           1
 N asparagine          3.4         31           2
 P proline             6.9         62           2
 Q glutamine           4.4         40           2
 R arginine            5.2         47           2
 S serine              7.5         68           4
 T threonine           6.2         56           3
 V valine              5.3         48           2
 W tryptophan          2.2         20           1
 Y tyrosine            4.3         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuropilin 2 isoform 5 precursor 
NRP2                  0.997   neuropilin 2 isoform 4 precursor 
NRP2                  0.899   neuropilin 2 isoform 1 precursor 
NRP2                  0.898   neuropilin 2 isoform 3 precursor 
NRP2                  0.898   neuropilin 2 isoform 2 precursor 
NRP2                  0.603   neuropilin 2 isoform 6 precursor 
NRP1                  0.380   neuropilin 1 isoform a 
NRP1                  0.333   neuropilin 1 isoform b 
NRP1                  0.333   neuropilin 1 isoform c 
MFGE8                 0.089   milk fat globule-EGF factor 8 protein isoform a [Ho...
EDIL3                 0.079   EGF-like repeats and discoidin I-like domains-contai...
F8                    0.075   coagulation factor VIII isoform a precursor 
TLL2                  0.070   tolloid-like 2 
TLL1                  0.068   tolloid-like 1 
F5                    0.068   coagulation factor V precursor 
BMP1                  0.068   bone morphogenetic protein 1 isoform 2 precursor [Hom...
BMP1                  0.067   bone morphogenetic protein 1 isoform 1 precursor [Hom...
BMP1                  0.067   bone morphogenetic protein 1 isoform 3 precursor [Hom...
CUBN                  0.065   cubilin 
PCOLCE                0.062   procollagen C-endopeptidase enhancer 
CDCP2                 0.060   CUB domain containing protein 2 
PCOLCE2               0.057   procollagen C-endopeptidase enhancer 2 
F8                    0.055   coagulation factor VIII isoform b precursor 
DCBLD2                0.055   discoidin, CUB and LCCL domain containing 2 
NETO2                 0.054   neuropilin- and tolloid-like protein 2 precursor [Ho...
MFGE8                 0.053   milk fat globule-EGF factor 8 protein isoform b [Ho...
NETO1                 0.047   neuropilin- and tolloid-like protein 1 isoform 3 pre...
NETO1                 0.047   neuropilin- and tolloid-like protein 1 isoform 2 pre...
CSMD3                 0.046   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.046   CUB and Sushi multiple domains 3 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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