Guide to the Human Genome
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Name: F8 Sequence: fasta or formatted (216aa) NCBI GI: 10518506
Description:

coagulation factor VIII isoform b precursor

Referenced in:

Coagulation

Other entries for this name:
alt prot [2351aa] coagulation factor VIII isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          9           1
 C cysteine            1.4          3           1
 D aspartate           4.2          9           1
 E glutamate           2.8          6           1
 F phenylalanine       5.1         11           2
 G glycine             5.6         12           1
 H histidine           3.2          7           1
 I isoleucine          5.6         12           2
 K lysine              5.1         11           1
 L leucine             8.8         19           2
 M methionine          4.2          9           1
 N asparagine          5.1         11           2
 P proline             5.6         12           2
 Q glutamine           6.9         15           1
 R arginine            5.1         11           1
 S serine              9.7         21           3
 T threonine           6.0         13           2
 V valine              6.5         14           2
 W tryptophan          2.3          5           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor VIII isoform b precursor 
F8                    0.960   coagulation factor VIII isoform a precursor 
F5                    0.411   coagulation factor V precursor 
EDIL3                 0.375   EGF-like repeats and discoidin I-like domains-contai...
MFGE8                 0.337   milk fat globule-EGF factor 8 protein isoform a [Ho...
NRP2                  0.245   neuropilin 2 isoform 3 precursor 
NRP2                  0.245   neuropilin 2 isoform 5 precursor 
NRP2                  0.245   neuropilin 2 isoform 1 precursor 
NRP2                  0.245   neuropilin 2 isoform 6 precursor 
NRP2                  0.245   neuropilin 2 isoform 4 precursor 
NRP2                  0.245   neuropilin 2 isoform 2 precursor 
DCBLD2                0.226   discoidin, CUB and LCCL domain containing 2 
MFGE8                 0.219   milk fat globule-EGF factor 8 protein isoform b [Ho...
NRP1                  0.209   neuropilin 1 isoform c 
NRP1                  0.209   neuropilin 1 isoform b 
NRP1                  0.209   neuropilin 1 isoform a 
DCBLD1                0.202   discoidin, CUB and LCCL domain containing 1 
AEBP1                 0.183   adipocyte enhancer binding protein 1 precursor [Homo...
CPXM2                 0.181   carboxypeptidase X (M14 family), member 2 
RS1                   0.169   X-linked juvenile retinoschisis protein precursor [H...
CNTNAP2               0.140   cell recognition molecule Caspr2 precursor 
CPXM1                 0.135   carboxypeptidase X, member 1 precursor 
CNTNAP4               0.131   cell recognition protein CASPR4 isoform 2 
CNTNAP4               0.131   cell recognition protein CASPR4 isoform 1 
LOC389722             0.124   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.124   PREDICTED: hypothetical protein LOC389722 isoform 1...
LOC642406             0.124   PREDICTED: similar to contactin associated protein-...
CNTNAP3               0.124   cell recognition molecule CASPR3 
DDR1                  0.116   discoidin domain receptor family, member 1 isoform b...
DDR1                  0.116   discoidin domain receptor family, member 1 isoform c...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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