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Search of human proteins with 30425506
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30425506 transmembrane protein 52 [Homo sapiens]
(209 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30425506 transmembrane protein 52 [Homo sapiens] 435 e-122
gi|23308507 hypothetical protein LOC120939 [Homo sapiens] 77 8e-15
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] 42 4e-04
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 38 0.005
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 38 0.005
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.005
gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens] 38 0.007
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 38 0.007
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 38 0.007
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.012
gi|150378539 piccolo isoform 1 [Homo sapiens] 37 0.012
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 37 0.016
gi|46409276 transmembrane protein 207 [Homo sapiens] 37 0.016
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 36 0.021
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 35 0.035
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 35 0.046
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 35 0.046
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 35 0.046
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 35 0.060
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 34 0.078
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 34 0.078
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 34 0.078
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 34 0.078
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 34 0.078
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 34 0.078
gi|61966747 hypothetical protein LOC389151 [Homo sapiens] 34 0.078
gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo s... 34 0.078
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 34 0.078
gi|41352718 deltex homolog 1 [Homo sapiens] 34 0.078
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 34 0.078
>gi|30425506 transmembrane protein 52 [Homo sapiens]
Length = 209
Score = 435 bits (1119), Expect = e-122
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MARGPLAARGLRLLLPLLPLLPLLPLPQVALGFADGSCDPSDQCPPQARWSSLWHVGLIL 60
MARGPLAARGLRLLLPLLPLLPLLPLPQVALGFADGSCDPSDQCPPQARWSSLWHVGLIL
Sbjct: 1 MARGPLAARGLRLLLPLLPLLPLLPLPQVALGFADGSCDPSDQCPPQARWSSLWHVGLIL 60
Query: 61 LAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSS 120
LAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSS
Sbjct: 61 LAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSS 120
Query: 121 VQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPL 180
VQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPL
Sbjct: 121 VQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPL 180
Query: 181 LGASGLETTPVPQESGPNTQLPPCSPGAP 209
LGASGLETTPVPQESGPNTQLPPCSPGAP
Sbjct: 181 LGASGLETTPVPQESGPNTQLPPCSPGAP 209
>gi|23308507 hypothetical protein LOC120939 [Homo sapiens]
Length = 163
Score = 77.4 bits (189), Expect = 8e-15
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 50 WSSLWHVGLILLAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLPPARQPCDVAVIPMDSDS 109
W LW++ L+++ LLLLCG+T+ C R CCL +Q + PP PC+V VI D DS
Sbjct: 19 WVHLWYIWLLVVIGALLLLCGLTSLCFRCCCLSRQQNGEDGGPP---PCEVTVIAFDHDS 75
Query: 110 PVHSTVTSYSSVQYPLGMR-LPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPRE 168
+ ST+TS SV P R L + L + +L P Y+EA+ M
Sbjct: 76 TLQSTITSLQSVFGPAARRILAVAHSHSSLGQLPSSLDTL------PGYEEALHM----- 124
Query: 169 EGPALSQKPSPLLGASGLETTPVPQESGPNTQLPP 203
S+ + G + PVP+E QLPP
Sbjct: 125 -----SRFTVAMCGQKAPDLPPVPEEK----QLPP 150
>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
Length = 1445
Score = 42.0 bits (97), Expect = 4e-04
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 88 QPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYS 147
QPH + P ++ P +P+ ST++ P M PFG S + P
Sbjct: 175 QPHGKCMQDPSPASLSPPAPPAPLASTLS-------PGPMTFSEPFGPHSTLSASGPPEP 227
Query: 148 LYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLE----TTPVPQESGPNTQ-LP 202
L + P + V P+ GP S P P +GL+ T PVPQ S + Q LP
Sbjct: 228 LLPLKCPATQPHVVFPPSPQPHGPLASSPPPPDSSLAGLQCGSTTCPVPQSSPLHNQVLP 287
Query: 203 P 203
P
Sbjct: 288 P 288
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 38.1 bits (87), Expect = 0.005
Identities = 30/117 (25%), Positives = 39/117 (33%), Gaps = 10/117 (8%)
Query: 93 PARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYTPE 152
P P A+ P P+ T P G+ +P P S P ++ P
Sbjct: 621 PPSLPGGTAISP---PPPLSGDATIPPPPPLPEGVGIPSP-------SSLPGGTAIPPPP 670
Query: 153 PPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSPGAP 209
P P P + P PL G +G+ P P GP PP PG P
Sbjct: 671 PLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 727
Score = 32.0 bits (71), Expect = 0.39
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 130 PLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETT 189
PLP G + P + +P PP S D + P EG + PSP G
Sbjct: 611 PLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGI---PSPSSLPGGTAIP 667
Query: 190 PVPQESGPNTQLPPCSPGAP 209
P P G + ++PP P P
Sbjct: 668 PPPPLPG-SARIPPPPPPLP 686
Score = 27.3 bits (59), Expect = 9.5
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 139 DSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPN 198
DS PP P PPP + P G P PL G + + P P G
Sbjct: 595 DSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVG 653
Query: 199 TQLPPCSPG 207
P PG
Sbjct: 654 IPSPSSLPG 662
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 38.1 bits (87), Expect = 0.005
Identities = 30/117 (25%), Positives = 39/117 (33%), Gaps = 10/117 (8%)
Query: 93 PARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYTPE 152
P P A+ P P+ T P G+ +P P S P ++ P
Sbjct: 630 PPSLPGGTAISP---PPPLSGDATIPPPPPLPEGVGIPSP-------SSLPGGTAIPPPP 679
Query: 153 PPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSPGAP 209
P P P + P PL G +G+ P P GP PP PG P
Sbjct: 680 PLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 736
Score = 32.0 bits (71), Expect = 0.39
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 130 PLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETT 189
PLP G + P + +P PP S D + P EG + PSP G
Sbjct: 620 PLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGI---PSPSSLPGGTAIP 676
Query: 190 PVPQESGPNTQLPPCSPGAP 209
P P G + ++PP P P
Sbjct: 677 PPPPLPG-SARIPPPPPPLP 695
Score = 27.3 bits (59), Expect = 9.5
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 139 DSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPN 198
DS PP P PPP + P G P PL G + + P P G
Sbjct: 604 DSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVG 662
Query: 199 TQLPPCSPG 207
P PG
Sbjct: 663 IPSPSSLPG 671
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.1 bits (87), Expect = 0.005
Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 18/136 (13%)
Query: 89 PHLPPARQPCDVAVIPMDSDSPVH-----STVTSYSSVQYPLGMRLPLPF---GELDLDS 140
P PP + AV P+ S +H S++ S+S Q PL + P L S
Sbjct: 464 PASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSP-QAPLSSLIMPPLETQSSLAPPS 522
Query: 141 MAPPAYSLYTPE--------PPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVP 192
+ P SL TP PPP + + P E P P PL TTP P
Sbjct: 523 LQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPA-PCPLQAPPSPLTTPPP 581
Query: 193 QESGPNTQLPPCSPGA 208
+ PP +P A
Sbjct: 582 ETPSSIATPPPQAPPA 597
Score = 32.3 bits (72), Expect = 0.30
Identities = 36/119 (30%), Positives = 45/119 (37%), Gaps = 21/119 (17%)
Query: 92 PPARQPCDVAVIPMD-SDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYT 150
PP++ P +A P+ SP S S S+ P + P P APP L
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP---QAPPPLA-------APP---LQV 737
Query: 151 PEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSPGAP 209
P PP+ A P P PLL A L+ P P S P + L P AP
Sbjct: 738 PPSPPASPPMSPSATPPPRVP-------PLLAAPPLQVPPSPPASLPMSPLAKPPPQAP 789
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 142 APPAYSLYTPEP--PPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTP---VPQESG 196
APP+ L TP P P S A P P L PSP L S L T P P +
Sbjct: 571 APPS-PLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPL--SPLATPPPQAPPXLAL 627
Query: 197 PNTQLPPCSPGAP 209
P Q PP P +P
Sbjct: 628 PPLQAPPSPPASP 640
Score = 30.0 bits (66), Expect = 1.5
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 23/122 (18%)
Query: 92 PPARQPCDVAVIPMDSD-----SPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAY 146
PP + P +A+ P+ + SP S + + S Q P + + L L PP+
Sbjct: 617 PPPQAPPXLALPPLQAPPSPPASPPLSPLAT-PSPQAPNALAVHL----LQAPFSPPPSP 671
Query: 147 SLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSP 206
+ P PP+ A P + P P L A L+ P P S PP SP
Sbjct: 672 PVQAPFSPPASPPVSPSATPPSQAP-------PSLAAPPLQVPPSPPAS------PPMSP 718
Query: 207 GA 208
A
Sbjct: 719 SA 720
Score = 28.5 bits (62), Expect = 4.3
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Query: 104 PMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLD----------SMAPPAYSLYTPEP 153
P ++ +P+ +T+ + PL + P P L S APP+ + +
Sbjct: 320 PDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQA 379
Query: 154 PPSYDEAVKMAKPRE-EGPALSQKPSPLLGASGLETT 189
PPS + P P+L PSPL +S TT
Sbjct: 380 PPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATT 416
>gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens]
Length = 368
Score = 37.7 bits (86), Expect = 0.007
Identities = 61/222 (27%), Positives = 83/222 (37%), Gaps = 25/222 (11%)
Query: 6 LAARGLRLLLP---LLPLLPLLPLPQVALG-FADGSCDPS---DQCPPQARWSSLWHVGL 58
LA G LP L P P +P P V G CDPS + P Q+R S
Sbjct: 116 LAGEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRP--- 172
Query: 59 ILLAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSY 118
A G+ L + +LP + D+ ++++ + Y
Sbjct: 173 ---AAPKAGPPGLVHPLFSPSHLTSKTPPPLYLPTEGRRSDLPGGLAGPRGGLNTSRSLY 229
Query: 119 SSVQYPLGMRLP-LPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMA---KPREEG-PAL 173
S +Q P P P G PP Y L P PPP + +A R +G PA+
Sbjct: 230 SGLQNPCSTATPGPPLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGDGPPAV 289
Query: 174 SQKPS--PLLGASGLET----TPVPQESGPNTQLPPCSPGAP 209
S +PS LG G T P P S + +L P +PG P
Sbjct: 290 SSQPSGGRSLGEEGPPTRGASPPTPPVSIKSERLSP-APGGP 330
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 37.7 bits (86), Expect = 0.007
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 106 DSDSPVHSTVTSYSSVQYPLGMRL---------PLPF-GELDLDSMAPPAYSLYTPEPPP 155
+++ PV ST+ SY+++ G P P G S A A P PPP
Sbjct: 732 EAEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPP 791
Query: 156 SYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSPGAP 209
+V + P E P L + P P GA+G + + +GP+ P +P P
Sbjct: 792 KRLSSV--SGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGP 843
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 37.7 bits (86), Expect = 0.007
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 106 DSDSPVHSTVTSYSSVQYPLGMRL---------PLPF-GELDLDSMAPPAYSLYTPEPPP 155
+++ PV ST+ SY+++ G P P G S A A P PPP
Sbjct: 814 EAEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPP 873
Query: 156 SYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSPGAP 209
+V + P E P L + P P GA+G + + +GP+ P +P P
Sbjct: 874 KRLSSV--SGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGP 925
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 37.0 bits (84), Expect = 0.012
Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 86 QAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPL-PFGELD-----LD 139
Q P PPA+QP P + P + + Q P ++ P+ P G L
Sbjct: 308 QPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLG 367
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNT 199
PPA + +P +A+P G +Q+P P + TP P P
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL 427
Query: 200 QLPPCSPG 207
Q P +PG
Sbjct: 428 QSPAKAPG 435
Score = 29.6 bits (65), Expect = 1.9
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMA-------KPREEGPALS----QKPSPLLGASGLET 188
S PP+ + +PPP K + KP + P + Q+PSP ++ T
Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQST 555
Query: 189 TPVPQE-SGPNTQLPPCSPGA 208
PV Q SG Q P SP A
Sbjct: 556 KPVSQTGSGKPLQPPTVSPSA 576
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 37.0 bits (84), Expect = 0.012
Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 86 QAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPL-PFGELD-----LD 139
Q P PPA+QP P + P + + Q P ++ P+ P G L
Sbjct: 308 QPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLG 367
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNT 199
PPA + +P +A+P G +Q+P P + TP P P
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL 427
Query: 200 QLPPCSPG 207
Q P +PG
Sbjct: 428 QSPAKAPG 435
Score = 29.6 bits (65), Expect = 1.9
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMA-------KPREEGPALS----QKPSPLLGASGLET 188
S PP+ + +PPP K + KP + P + Q+PSP ++ T
Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQST 555
Query: 189 TPVPQE-SGPNTQLPPCSPGA 208
PV Q SG Q P SP A
Sbjct: 556 KPVSQTGSGKPLQPPTVSPSA 576
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 36.6 bits (83), Expect = 0.016
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 89 PHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSL 148
P LPPA D AV P + P+H + PL + P + L + +P +
Sbjct: 235 PPLPPASVLSDKAVKPQLA--PLH-----LPPIPPPLPLLPPCGYPGLKAEPASPAQDAQ 287
Query: 149 YTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSPGA 208
P PPP + PR PA P P + +S P+P +S P+ Q PP GA
Sbjct: 288 EPPAPPPPLPPYASCS-PRASLPA---PPLPGVNSSSETPPPLPPKS-PSFQAPPQKAGA 342
Score = 30.0 bits (66), Expect = 1.5
Identities = 41/151 (27%), Positives = 57/151 (37%), Gaps = 32/151 (21%)
Query: 83 KQAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMA 142
+ A +P++P P P P+ + S S ++ PL + P P + +L +A
Sbjct: 163 RTAPPRPNVPAPPPPT-----PPPPPPPLPPPLPSSSPIKTPL-VSPPGPLTKGNLPVVA 216
Query: 143 PPAYSLYTPEPPPS-------------YDEAVKMAKPREEGPALSQKPSPLL---GASGL 186
PP P PPP D+AVK P + P PLL G GL
Sbjct: 217 PPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPI-PPPLPLLPPCGYPGL 275
Query: 187 ETTP------VPQESGPNTQLPP---CSPGA 208
+ P + P LPP CSP A
Sbjct: 276 KAEPASPAQDAQEPPAPPPPLPPYASCSPRA 306
>gi|46409276 transmembrane protein 207 [Homo sapiens]
Length = 146
Score = 36.6 bits (83), Expect = 0.016
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 29/148 (19%)
Query: 23 LLPLPQVALGFADGSCDPSDQCPP-QARWSSLWHVGLILLAVLL-LLLCGVTAGCVRFCC 80
+L LP L +D C+ + C + + W++ ++LL VL+ LLCG C++ C
Sbjct: 18 ILCLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQ-CW 76
Query: 81 LRKQAQAQPHLPPARQPCDV-AVIPMDS----DSPVHSTVTSYSSVQYPLGMRLPLP-FG 134
LR+ P + R+ V AV +DS ++ V TV + Q P +P P FG
Sbjct: 77 LRR-----PRIDSHRRTMAVFAVGDLDSIYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFG 131
Query: 135 ELDLDSMAPPAYSLYTPEPPPSYDEAVK 162
L PP Y+E VK
Sbjct: 132 PLG---------------SPPPYEEIVK 144
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 36.2 bits (82), Expect = 0.021
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 96 QPCDVAVIPMDSDSPVH--STVTSYSSVQYPLGMRLPLPFGE-LDLDSMAPPAYSLYTPE 152
+P V S +PV + VT+ + V P L +P + S+ PPA+ + P
Sbjct: 606 EPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPV 665
Query: 153 PPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSP 206
PPP + P P L +P G PVP P +PP P
Sbjct: 666 PPPGF-------SPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVP 712
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 35.4 bits (80), Expect = 0.035
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 97 PCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRL----PLPFGELDLDSMAPPAYSLYTPE 152
P AV+P S T + + P+G+R+ PL L +PPA ++ +P
Sbjct: 661 PLPAAVVPSTPTSAPAPTQPAPTPTSGPIGLRILAQQPLSVTCFSLALPSPPAVAVASPA 720
Query: 153 PPPSYDEAVKMAKPREEGPALSQKPSP 179
P P A A R + PA ++ P+P
Sbjct: 721 PAP----APSPAPARAQAPASARDPAP 743
Score = 30.0 bits (66), Expect = 1.5
Identities = 44/146 (30%), Positives = 56/146 (38%), Gaps = 25/146 (17%)
Query: 70 GVTAGCVRFCCLRKQAQAQPHLPPA---RQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLG 126
G AG + LR+QA P++PP P A +P S ++ PL
Sbjct: 314 GYQAGGLGSPYLRQQAAQAPYIPPLGLDAYPYPSAPLPAPSPG---------LKLEPPLT 364
Query: 127 MRLPLPFGELDLD-SMAPPAYSLYTPEP-----PPSYDEAVKMAKPREEGPALSQKPSPL 180
R PL F L A SLY P PPS + A P+ P Q+
Sbjct: 365 PRCPLDFAPQTLSFPYARDDLSLYGASPGLGGTPPSQNNV--RAVPQ---PGAFQRACQP 419
Query: 181 LGASGLETTPV--PQESGPNTQLPPC 204
L AS + PV QE+ T LP C
Sbjct: 420 LPASQPCSEPVRPAQEAEEKTWLPSC 445
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 35.0 bits (79), Expect = 0.046
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 30/135 (22%)
Query: 82 RKQAQAQPHLPPARQPCDVAVIPMDSDSP--VHSTVTSYSSVQYPLGMRLPLPFGELDLD 139
++Q Q P LPP QP + P + P VH + +SV +P P G
Sbjct: 987 QQQQQPPPALPPGSQP----IPPTGAAGPPAVHGLAVAPASV-------VPAPAG----- 1030
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPS------PLLGASGLETTPVPQ 193
S APP + P +A A P+++ PA + +P P G G +P P
Sbjct: 1031 SGAPPG----SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG--PSPFPN 1084
Query: 194 ESGPNTQLPPCSPGA 208
+ P + +P PG+
Sbjct: 1085 QQTPPSMMPGAVPGS 1099
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 35.0 bits (79), Expect = 0.046
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 30/135 (22%)
Query: 82 RKQAQAQPHLPPARQPCDVAVIPMDSDSP--VHSTVTSYSSVQYPLGMRLPLPFGELDLD 139
++Q Q P LPP QP + P + P VH + +SV +P P G
Sbjct: 956 QQQQQPPPALPPGSQP----IPPTGAAGPPAVHGLAVAPASV-------VPAPAG----- 999
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPS------PLLGASGLETTPVPQ 193
S APP + P +A A P+++ PA + +P P G G +P P
Sbjct: 1000 SGAPPG----SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG--PSPFPN 1053
Query: 194 ESGPNTQLPPCSPGA 208
+ P + +P PG+
Sbjct: 1054 QQTPPSMMPGAVPGS 1068
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 35.0 bits (79), Expect = 0.046
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 30/135 (22%)
Query: 82 RKQAQAQPHLPPARQPCDVAVIPMDSDSP--VHSTVTSYSSVQYPLGMRLPLPFGELDLD 139
++Q Q P LPP QP + P + P VH + +SV +P P G
Sbjct: 987 QQQQQPPPALPPGSQP----IPPTGAAGPPAVHGLAVAPASV-------VPAPAG----- 1030
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPS------PLLGASGLETTPVPQ 193
S APP + P +A A P+++ PA + +P P G G +P P
Sbjct: 1031 SGAPPG----SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG--PSPFPN 1084
Query: 194 ESGPNTQLPPCSPGA 208
+ P + +P PG+
Sbjct: 1085 QQTPPSMMPGAVPGS 1099
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 34.7 bits (78), Expect = 0.060
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 113 STVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPA 172
S V +S L + +P+ + + PA +++ PE P + AV+++ P E
Sbjct: 946 SAVAGFSPEWAALAITVPITEEDGTPEGPVTPATTVHAPEEPDT--AAVRVSTPEEPASP 1003
Query: 173 LSQKPSPLLGASGLETTPVPQE-SGPNTQLPP 203
+ P+P S P P+E + P +PP
Sbjct: 1004 AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPP 1035
Score = 30.0 bits (66), Expect = 1.5
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 142 APPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQK--PSPLLGASGLETTPVPQES 195
A PA ++ TPE P S AV P E PA P+P AS P P+ES
Sbjct: 1118 ASPAAAVPTPEEPASPAAAV----PTPEEPAFPAPAVPTPEESASAAVAVPTPEES 1169
Score = 28.9 bits (63), Expect = 3.3
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Query: 142 APPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGP---- 197
A PA ++ TPE P AV P E A P+P AS P P ES
Sbjct: 1131 ASPAAAVPTPEEPAFPAPAVPT--PEESASAAVAVPTPEESASPAAAVPTPAESASFAAV 1188
Query: 198 -NTQLPPCSPGA 208
T P SP A
Sbjct: 1189 VATLEEPTSPAA 1200
Score = 28.5 bits (62), Expect = 4.3
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 142 APPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQE-SGPNTQ 200
A PA ++ TPE P S A + P E + P P S P P+E + P
Sbjct: 1001 ASPAAAVPTPEEPTS--PAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAA 1058
Query: 201 LP----PCSPGA 208
+P P SP A
Sbjct: 1059 VPTPEEPTSPAA 1070
Score = 28.5 bits (62), Expect = 4.3
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 144 PAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQE-SGPNTQLP 202
PA ++ TPE P S A + P E + P+P S P P+E + P +P
Sbjct: 1055 PAAAVPTPEEPTS--PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP 1112
Query: 203 ----PCSPGA 208
P SP A
Sbjct: 1113 TPEEPASPAA 1122
Score = 28.5 bits (62), Expect = 4.3
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 144 PAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQE-SGPNTQLP 202
PA ++ TPE P S A + P E + P+P S P P+E + P +P
Sbjct: 1068 PAAAVPTPEEPTS--PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVP 1125
Query: 203 ----PCSPGA 208
P SP A
Sbjct: 1126 TPEEPASPAA 1135
Score = 28.1 bits (61), Expect = 5.6
Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 12/113 (10%)
Query: 91 LPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAP------- 143
+PP +P A + P S + + + P +P E A
Sbjct: 1033 VPPPEEPTSPAAAVPTPEEPT-SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP 1091
Query: 144 --PAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQE 194
PA ++ TPE P S A + P E + P+P AS P P+E
Sbjct: 1092 TSPAAAVPTPEEPTS--PAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEE 1142
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.078
Identities = 32/121 (26%), Positives = 42/121 (34%), Gaps = 10/121 (8%)
Query: 91 LPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYT 150
LP + QP V+ IPM SP + + +L F E P L+T
Sbjct: 342 LPRSWQP--VSRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSPLFT 399
Query: 151 PEPPPSYDEAVKMAKPREEGPALSQKPSPLL--GASGLETTPVPQESGPNTQLPPCSPGA 208
PPP K+ + P +P P L TP P P PP + G
Sbjct: 400 RAPPP------KLQPQPQPQPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGP 453
Query: 209 P 209
P
Sbjct: 454 P 454
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.078
Identities = 32/121 (26%), Positives = 42/121 (34%), Gaps = 10/121 (8%)
Query: 91 LPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYT 150
LP + QP V+ IPM SP + + +L F E P L+T
Sbjct: 342 LPRSWQP--VSRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSPLFT 399
Query: 151 PEPPPSYDEAVKMAKPREEGPALSQKPSPLL--GASGLETTPVPQESGPNTQLPPCSPGA 208
PPP K+ + P +P P L TP P P PP + G
Sbjct: 400 RAPPP------KLQPQPQPQPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGP 453
Query: 209 P 209
P
Sbjct: 454 P 454
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.3 bits (77), Expect = 0.078
Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 18/126 (14%)
Query: 87 AQPHLPPARQPCDVAVIPMDSDSPVHSTV---TSYSSVQYPLGMRLPLPFGELDLDSMAP 143
A P P A P P S +P +T T ++ Q P P + AP
Sbjct: 167 AAPPTPSATTPA-----PPSSSAPPETTAAPPTPSATTQAPPSSSAPPE------TTAAP 215
Query: 144 PAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPP 203
P TP PP S A P + P+PL ++ ETT VP T L P
Sbjct: 216 PTPPATTPAPPSSSAPPETTAAPPTPS---ATTPAPLSSSAPPETTAVPPTPSATT-LDP 271
Query: 204 CSPGAP 209
S AP
Sbjct: 272 SSASAP 277
Score = 29.6 bits (65), Expect = 1.9
Identities = 31/128 (24%), Positives = 42/128 (32%), Gaps = 12/128 (9%)
Query: 84 QAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAP 143
+ A P P A P P+ S +P +T + L P + AP
Sbjct: 233 ETTAAPPTPSATTPA-----PLSSSAPPETTAVPPTPSATTLD---PSSASAPPETTAAP 284
Query: 144 PAYSLYTPEPP----PSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNT 199
P S TP PP P A + P L+ S A +TT T
Sbjct: 285 PTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTT 344
Query: 200 QLPPCSPG 207
+ P +PG
Sbjct: 345 KQPTSAPG 352
Score = 27.3 bits (59), Expect = 9.5
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPS-----PLLGASGLETTPVPQE 194
S APP + P P + + + P E A+ PS P ++ ETT P
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPET-TAVPPTPSATTLDPSSASAPPETTAAPPT 286
Query: 195 SGPNTQLPPCSP 206
T PP SP
Sbjct: 287 PSATTPAPPSSP 298
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.3 bits (77), Expect = 0.078
Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 18/126 (14%)
Query: 87 AQPHLPPARQPCDVAVIPMDSDSPVHSTV---TSYSSVQYPLGMRLPLPFGELDLDSMAP 143
A P P A P P S +P +T T ++ Q P P + AP
Sbjct: 167 AAPPTPSATTPA-----PPSSSAPPETTAAPPTPSATTQAPPSSSAPPE------TTAAP 215
Query: 144 PAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPP 203
P TP PP S A P + P+PL ++ ETT VP T L P
Sbjct: 216 PTPPATTPAPPSSSAPPETTAAPPTPS---ATTPAPLSSSAPPETTAVPPTPSATT-LDP 271
Query: 204 CSPGAP 209
S AP
Sbjct: 272 SSASAP 277
Score = 29.6 bits (65), Expect = 1.9
Identities = 31/128 (24%), Positives = 42/128 (32%), Gaps = 12/128 (9%)
Query: 84 QAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAP 143
+ A P P A P P+ S +P +T + L P + AP
Sbjct: 233 ETTAAPPTPSATTPA-----PLSSSAPPETTAVPPTPSATTLD---PSSASAPPETTAAP 284
Query: 144 PAYSLYTPEPP----PSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNT 199
P S TP PP P A + P L+ S A +TT T
Sbjct: 285 PTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTT 344
Query: 200 QLPPCSPG 207
+ P +PG
Sbjct: 345 KQPTSAPG 352
Score = 27.3 bits (59), Expect = 9.5
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPS-----PLLGASGLETTPVPQE 194
S APP + P P + + + P E A+ PS P ++ ETT P
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPET-TAVPPTPSATTLDPSSASAPPETTAAPPT 286
Query: 195 SGPNTQLPPCSP 206
T PP SP
Sbjct: 287 PSATTPAPPSSP 298
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.3 bits (77), Expect = 0.078
Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 18/126 (14%)
Query: 87 AQPHLPPARQPCDVAVIPMDSDSPVHSTV---TSYSSVQYPLGMRLPLPFGELDLDSMAP 143
A P P A P P S +P +T T ++ Q P P + AP
Sbjct: 167 AAPPTPSATTPA-----PPSSSAPPETTAAPPTPSATTQAPPSSSAPPE------TTAAP 215
Query: 144 PAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPP 203
P TP PP S A P + P+PL ++ ETT VP T L P
Sbjct: 216 PTPPATTPAPPSSSAPPETTAAPPTPS---ATTPAPLSSSAPPETTAVPPTPSATT-LDP 271
Query: 204 CSPGAP 209
S AP
Sbjct: 272 SSASAP 277
Score = 29.6 bits (65), Expect = 1.9
Identities = 31/128 (24%), Positives = 42/128 (32%), Gaps = 12/128 (9%)
Query: 84 QAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAP 143
+ A P P A P P+ S +P +T + L P + AP
Sbjct: 233 ETTAAPPTPSATTPA-----PLSSSAPPETTAVPPTPSATTLD---PSSASAPPETTAAP 284
Query: 144 PAYSLYTPEPP----PSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQESGPNT 199
P S TP PP P A + P L+ S A +TT T
Sbjct: 285 PTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTT 344
Query: 200 QLPPCSPG 207
+ P +PG
Sbjct: 345 KQPTSAPG 352
Score = 27.3 bits (59), Expect = 9.5
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 140 SMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPS-----PLLGASGLETTPVPQE 194
S APP + P P + + + P E A+ PS P ++ ETT P
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPET-TAVPPTPSATTLDPSSASAPPETTAAPPT 286
Query: 195 SGPNTQLPPCSP 206
T PP SP
Sbjct: 287 PSATTPAPPSSP 298
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 34.3 bits (77), Expect = 0.078
Identities = 32/132 (24%), Positives = 45/132 (34%), Gaps = 14/132 (10%)
Query: 81 LRKQAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMR------LPLPFG 134
L Q LPP P A P ++ ++YP G + PL
Sbjct: 925 LSPQLMPPDPLPPPLSPIITAAAP--------PALSPLGELEYPFGAKGDSDPESPLAAP 976
Query: 135 ELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPVPQE 194
L+ PP + PEP P P + +P P + L+ + VPQ
Sbjct: 977 ILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQN 1036
Query: 195 SGPNTQLPPCSP 206
S P+ PP P
Sbjct: 1037 SPPSQCSPPALP 1048
Score = 33.1 bits (74), Expect = 0.17
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 130 PLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKP-----SPLLGAS 184
PL L +PP+ +L TP PP EA ++ P EE P LS P SP AS
Sbjct: 514 PLEESPLSPPEESPPSPALETPLSPP--PEASPLSPPFEESP-LSPPPEELPTSPPPEAS 570
Query: 185 GLETTPVPQESGPNTQLPPCSP 206
L P P + P SP
Sbjct: 571 RLSPPPEESPMSPPPEESPMSP 592
Score = 32.3 bits (72), Expect = 0.30
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 25/82 (30%)
Query: 128 RLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLE 187
RLP P G L + P + P PPPS + K SQ PSP
Sbjct: 4288 RLPAPPGALSTGPVLGPVH----PTPPPSSPQEPKRP---------SQLPSP-------- 4326
Query: 188 TTPVPQESGPNTQLPPCSPGAP 209
++ +P E+ QLPP PG P
Sbjct: 4327 SSQLPTEA----QLPPTHPGTP 4344
>gi|61966747 hypothetical protein LOC389151 [Homo sapiens]
Length = 265
Score = 34.3 bits (77), Expect = 0.078
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
Query: 108 DSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPR 167
DSP S Y S + M +P G + P S P P +D ++ +P
Sbjct: 169 DSPTGSAAGLYPSSR---SMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPV 225
Query: 168 EEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPC 204
P PSP +G+ G P P + PPC
Sbjct: 226 PSSPLQPLPPSPCVGSPG------PHARSPLPERPPC 256
>gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo
sapiens]
Length = 905
Score = 34.3 bits (77), Expect = 0.078
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 111 VHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEG 170
VH + S S ++P + G S PP++S P PP+ ++ ++++P G
Sbjct: 137 VHPNLPSDKSQRWPHHSQPARASGSFAPISQTPPSFSPPPPLVPPAPEDLRRVSEPDLTG 196
Query: 171 PALSQKPSPLL-----GASGLETTPVPQESGPNTQLP 202
S SPLL G ++ P S P++ P
Sbjct: 197 AVSSTDSSPLLNEVSSSLIGTDSQAFPSVSKPSSAYP 233
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 34.3 bits (77), Expect = 0.078
Identities = 41/151 (27%), Positives = 56/151 (37%), Gaps = 32/151 (21%)
Query: 85 AQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSY--SSVQYPLGMRLPLPFGELDLDSMA 142
A+ +P P RQ D M S++P Y S +P P L+
Sbjct: 801 AEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFPLEEPG 860
Query: 143 PPAYSLYTPEP-PPSYDEAVKMAKP-------REE-----GPALSQKPSPLLGASGLETT 189
P P P PP DE K+ P +EE GP +KP+ +G+ G
Sbjct: 861 P------RPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPP 914
Query: 190 PVPQESGPNTQ-----------LPPCSPGAP 209
P +ES T+ +PP PGAP
Sbjct: 915 PPRRESRTETRWGPRPGSSRRGIPPEEPGAP 945
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 34.3 bits (77), Expect = 0.078
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 17/118 (14%)
Query: 97 PCDVAVIPMDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSM---APPAYSLYTPEP 153
P V IP PV ++ S Q L + L S APPA L P P
Sbjct: 178 PLTVGSIPKSQSWPVGASSGQPCSCQQCLLVNSTRAASNAILASQRRKAPPAPPL--PPP 235
Query: 154 PPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETTPV--PQESGPNTQLPPCSPGAP 209
PP P AL+ +PS + L P P E P PP SPGAP
Sbjct: 236 PP----------PGGPPGALAVRPSATFTGAALWAAPAAGPAEPAPPPGAPPRSPGAP 283
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 34.3 bits (77), Expect = 0.078
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 130 PLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPSPLLGASGLETT 189
P P G+ S PP S P+ PP A+K A ++ P + PS G G
Sbjct: 27 PSPEGD---PSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPESPS---GQVGPRPA 80
Query: 190 PVPQESGPNTQLPPCSPGAP 209
P PQE P+++ P P
Sbjct: 81 P-PQEESPSSEAKSRGPTPP 99
Score = 27.3 bits (59), Expect = 9.5
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 135 ELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGP--ALSQKPSPLLGASGLETTPVP 192
E + + +P P EAV+ +P + P +L K P +GL+ P
Sbjct: 735 EANANGSSPEPVKAVEARSPGLQKEAVQKEEPIPQEPQWSLPSKELPASLVNGLQPLPAH 794
Query: 193 QESGPNTQLP 202
QE+G +T P
Sbjct: 795 QENGFSTNGP 804
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,875,903
Number of Sequences: 37866
Number of extensions: 617415
Number of successful extensions: 4154
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 3566
Number of HSP's gapped (non-prelim): 774
length of query: 209
length of database: 18,247,518
effective HSP length: 98
effective length of query: 111
effective length of database: 14,536,650
effective search space: 1613568150
effective search space used: 1613568150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.