LAPTM4B 25198

Name: LAPTM4B	Sequence: fasta or formatted (317aa)		NCBI GI: 30409982
Description: lysosomal associated transmembrane protein 4 beta		Referenced in: Lysosomes and Related Organelles
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.0 35 4 C cysteine 3.5 11 2 D aspartate 4.1 13 2 E glutamate 2.8 9 2 F phenylalanine 3.8 12 2 G glycine 5.4 17 2 H histidine 0.6 2 1 I isoleucine 7.6 24 2 K lysine 1.9 6 1 L leucine 9.5 30 2 M methionine 2.8 9 1 N asparagine 4.1 13 1 P proline 7.6 24 4 Q glutamine 2.5 8 2 R arginine 7.9 25 3 S serine 6.6 21 3 T threonine 5.7 18 2 V valine 6.3 20 2 W tryptophan 1.6 5 1 Y tyrosine 4.7 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lysosomal associated transmembrane protein 4 beta [H... LAPTM4A 0.299 lysosomal protein transmembrane 4 alpha LAPTM5 0.048 lysosomal multispanning membrane protein 5 AGAP2 0.023 centaurin, gamma 1 isoform PIKE-L FLJ37078 0.021 hypothetical protein LOC222183 LOC100292853 0.019 PREDICTED: hypothetical protein LOC100288412 0.019 PREDICTED: hypothetical protein XP_002342328 C9orf86 0.013 Rab-like GTP-binding protein 1 isoform 1 GLCCI1 0.011 glucocorticoid induced transcript 1 FBN2 0.011 fibrillin 2 precursor LOC100292934 0.010 PREDICTED: hypothetical protein LOC100130174 0.010 PREDICTED: hypothetical protein LOC100130174 0.010 PREDICTED: hypothetical protein CDAN1 0.010 codanin 1 MARCH11 0.010 membrane-associated ring finger (C3HC4) 11 BZRAP1 0.010 peripheral benzodiazepine receptor-associated prote... BZRAP1 0.010 peripheral benzodiazepine receptor-associated prote... SRRM2 0.010 splicing coactivator subunit SRm300 TSPAN4 0.010 tetraspanin 4 isoform a TSPAN4 0.010 tetraspanin 4 isoform a TSPAN4 0.010 tetraspanin 4 isoform a TSPAN4 0.010 tetraspanin 4 isoform a TSPAN4 0.010 tetraspanin 4 isoform a TSPAN4 0.010 tetraspanin 4 isoform a OGFR 0.008 opioid growth factor receptor LOC100292370 0.008 PREDICTED: hypothetical protein LOC100130174 0.008 PREDICTED: hypothetical protein LOC645602 0.008 PREDICTED: hypothetical protein LOC645602 0.008 PREDICTED: hypothetical protein LOC645602 0.008 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.