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Search of human proteins with 30089972
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30089972 acyl-Coenzyme A oxidase 1 isoform a [Homo sapiens]
(660 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30089972 acyl-Coenzyme A oxidase 1 isoform a [Homo sapiens] 1336 0.0
gi|30089974 acyl-Coenzyme A oxidase 1 isoform b [Homo sapiens] 1272 0.0
gi|4501869 acyl-Coenzyme A oxidase 2 [Homo sapiens] 545 e-155
gi|156104864 acyl-Coenzyme A oxidase 3 isoform a [Homo sapiens] 278 1e-74
gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens] 248 2e-65
gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens] 214 2e-55
gi|218563752 acyl-Coenzyme A oxidase-like 1 [Homo sapiens] 196 4e-50
gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens] 187 2e-47
gi|4557233 short-chain acyl-CoA dehydrogenase precursor [Homo sa... 49 1e-05
gi|21361497 acyl-Coenzyme A dehydrogenase family, member 9 [Homo... 49 2e-05
gi|4501859 acyl-Coenzyme A dehydrogenase, short/branched chain p... 40 0.007
gi|4557235 acyl-Coenzyme A dehydrogenase, very long chain isofor... 38 0.026
gi|76496475 acyl-Coenzyme A dehydrogenase, very long chain isofo... 38 0.026
gi|187960098 medium-chain acyl-CoA dehydrogenase isoform b precu... 38 0.034
gi|4557231 medium-chain acyl-CoA dehydrogenase isoform a precurs... 38 0.034
gi|4501857 long-chain acyl-CoA dehydrogenase precursor [Homo sap... 36 0.13
gi|28373122 contactin 4 isoform a precursor [Homo sapiens] 35 0.22
gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor... 34 0.49
gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor... 34 0.49
gi|13470094 apolipoprotein L5 [Homo sapiens] 31 4.2
gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens] 30 7.1
gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens] 30 7.1
gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens] 30 7.1
gi|31377650 transmembrane protein 25 isoform 1 [Homo sapiens] 30 7.1
gi|27886593 PTK2 protein tyrosine kinase 2 isoform b [Homo sapiens] 30 7.1
gi|24476013 PTK2 protein tyrosine kinase 2 isoform a [Homo sapiens] 30 7.1
gi|221139838 transmembrane protein 25 isoform 4 [Homo sapiens] 30 7.1
gi|5454102 transforming, acidic coiled-coil containing protein 3... 30 9.3
>gi|30089972 acyl-Coenzyme A oxidase 1 isoform a [Homo sapiens]
Length = 660
Score = 1336 bits (3458), Expect = 0.0
Identities = 660/660 (100%), Positives = 660/660 (100%)
Query: 1 MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY 60
MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY
Sbjct: 1 MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY 60
Query: 61 EVAVRKSAIMVKKMREFGIADPDEIMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQQ 120
EVAVRKSAIMVKKMREFGIADPDEIMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQQ
Sbjct: 61 EVAVRKSAIMVKKMREFGIADPDEIMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQQ 120
Query: 121 ERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGL 180
ERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGL
Sbjct: 121 ERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGL 180
Query: 181 GKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGYL 240
GKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGYL
Sbjct: 181 GKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGYL 240
Query: 241 KMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKACTIA 300
KMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKACTIA
Sbjct: 241 KMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKACTIA 300
Query: 301 IRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINEGIG 360
IRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINEGIG
Sbjct: 301 IRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINEGIG 360
Query: 361 QGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPSCTF 420
QGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPSCTF
Sbjct: 361 QGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPSCTF 420
Query: 421 EGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSP 480
EGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSP
Sbjct: 421 EGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSP 480
Query: 481 ESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFS 540
ESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFS
Sbjct: 481 ESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFS 540
Query: 541 EKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIR 600
EKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIR
Sbjct: 541 EKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIR 600
Query: 601 SDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL 660
SDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL
Sbjct: 601 SDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL 660
>gi|30089974 acyl-Coenzyme A oxidase 1 isoform b [Homo sapiens]
Length = 660
Score = 1272 bits (3291), Expect = 0.0
Identities = 632/660 (95%), Positives = 642/660 (97%)
Query: 1 MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY 60
MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY
Sbjct: 1 MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY 60
Query: 61 EVAVRKSAIMVKKMREFGIADPDEIMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQQ 120
EVAVRKSAIMVKKMREFGIADPDEIMWFK EP+ L+ MF+PTLL+Q T Q+
Sbjct: 61 EVAVRKSAIMVKKMREFGIADPDEIMWFKKLHLVNFVEPVGLNYSMFIPTLLNQGTTAQK 120
Query: 121 ERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGL 180
E++ + + L+IIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGL
Sbjct: 121 EKWLLSSKGLQIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGL 180
Query: 181 GKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGYL 240
GKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGYL
Sbjct: 181 GKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGYL 240
Query: 241 KMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKACTIA 300
KMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKACTIA
Sbjct: 241 KMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKACTIA 300
Query: 301 IRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINEGIG 360
IRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINEGIG
Sbjct: 301 IRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINEGIG 360
Query: 361 QGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPSCTF 420
QGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPSCTF
Sbjct: 361 QGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPSCTF 420
Query: 421 EGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSP 480
EGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSP
Sbjct: 421 EGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSP 480
Query: 481 ESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFS 540
ESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFS
Sbjct: 481 ESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFS 540
Query: 541 EKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIR 600
EKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIR
Sbjct: 541 EKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIR 600
Query: 601 SDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL 660
SDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL
Sbjct: 601 SDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL 660
>gi|4501869 acyl-Coenzyme A oxidase 2 [Homo sapiens]
Length = 681
Score = 545 bits (1405), Expect = e-155
Identities = 303/674 (44%), Positives = 422/674 (62%), Gaps = 24/674 (3%)
Query: 1 MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY 60
M+PD+ ER SF+ E LT+ILDG + T RR++E++I + P+F +D F+T+++RY
Sbjct: 18 MHPDIESERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSYPEFSCKDNYFMTQNERY 77
Query: 61 EVAVRKSAIMVKKMREFG-IADPDEIMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQ 119
+ A+R++ + R G + D E+ + +R + L++ L +E+
Sbjct: 78 KAAMRRAFHIRLIARRLGWLEDGREL----GYAYRALSGDVALNIHRVFVRALRSLGSEE 133
Query: 120 QERFFMPAW-NLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPG 178
Q + P N++II TYAQTE+GHGT+L+GLET ATYD TQEF+++SPT+T+ KWWPG
Sbjct: 134 QIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATKWWPG 193
Query: 179 GLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNG 238
LG+++ HA+V AQLI G G+HAFIVPIR + H PLPGI +GDIGPK +D+ DNG
Sbjct: 194 DLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIGPKMDFDQTDNG 253
Query: 239 YLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVR-SFLVGEAARALSKAC 297
+L++++ R+PRENML ++AQV PDGTYVK + + Y MV VR L GE L KAC
Sbjct: 254 FLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVELLSGEILPILQKAC 313
Query: 298 TIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINE 357
IA+RYS +R QS ++P +PE ++LD+QTQQ KLFP LA +YAF F+ + E +
Sbjct: 314 VIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFLAVSLLEFFQHSYT 373
Query: 358 GIGQGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPS 417
I D S LPELHAL+ G+KA S G E CR ACGGHGYS SGLP++ + S
Sbjct: 374 AILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSGLPSLVTKLSAS 433
Query: 418 CTFEGENTVMMLQTARFLMKSYDQVHSG------KLVCGMVSYLNDLPSQRIQPQQVAVW 471
CT+EGENTV+ LQ ARFL+KSY Q + + V+YL R Q+ A
Sbjct: 434 CTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAPDLARCPAQRAA-- 491
Query: 472 PTMVDINSPESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHC 531
D PE T A+ A RL++ + ++LQ + AWN T+V ++A++ HC
Sbjct: 492 ----DFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHEAWNQTTVIHLQAAKVHC 547
Query: 532 HYVVVKLFSEKLLKIQDK-AIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQ 590
+YV VK F+E L K++++ AIQ VL+ LC L++++GI N+GDFL + ++ Q+
Sbjct: 548 YYVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGAQVDMART 607
Query: 591 RVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAE--VHE 648
+LL LIR DA+ L DAFDF D L S LG YDGNVYE LF+WA+ SP N E +E
Sbjct: 608 AYLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNTQENPAYE 667
Query: 649 SYKH--LKSLQSKL 660
Y L+S +SKL
Sbjct: 668 EYIRPLLQSWRSKL 681
>gi|156104864 acyl-Coenzyme A oxidase 3 isoform a [Homo sapiens]
Length = 700
Score = 278 bits (711), Expect = 1e-74
Identities = 183/540 (33%), Positives = 282/540 (52%), Gaps = 22/540 (4%)
Query: 112 LHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVT 171
++ + +E+ + + +EI G +A TE+ HG++ + + TTA YDP T+EFI++SP
Sbjct: 132 VYSSGSERHLTYIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFE 191
Query: 172 SIKWWPGGLGKTSNHAIVLAQLITKG-KCYGLHAFIVPIREIGTHKPLPGITVGDIGPKF 230
+ K+W G +GKT+ HA+V A+L G +C+GLH FIV IR+ T P+PG+ VGDIG K
Sbjct: 192 AAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKL 251
Query: 231 GYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSN-----KLTYGTMVFVRSFL 285
G + +DNG+ R+PR+++L + V P+GTYV P + + G++ R +
Sbjct: 252 GQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSI 311
Query: 286 VGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVG 345
V A L A IA+R+SA R Q E E +L++ QQ++L P LA YA
Sbjct: 312 VSLAILNLKLAVAIALRFSATRRQFG-PTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFS 370
Query: 346 AYMKETYHRINEGIGQGDLS----EL-PELHALTAGLKAFTSWTANTGIEACRMACGGHG 400
+ + G+ GD S EL E+HAL + K SWT GI+ CR ACGGHG
Sbjct: 371 KSLFLDLVELQRGLASGDRSARQAELGREIHALASASKPLASWTTQQGIQECREACGGHG 430
Query: 401 YSHCSGLPNIYVNFTPSCTFEGENTVMMLQTARFLMKSY-DQVHSG---KLVCGMVSYLN 456
Y + L + + P+CT+EG+N +++ QT+ +L+ QVH G + V +L+
Sbjct: 431 YLAMNRLGVLRDDNDPNCTYEGDNNILLQQTSNYLLGLLAHQVHDGACFRSPLKSVDFLD 490
Query: 457 DLPSQRIQPQQVAVWPTMVDINSPESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAW 516
P Q +V+ ++ D AYK L+ + L +E S A
Sbjct: 491 AYPGILDQKFEVS---SVADCLDSAVALAAYKWLVCYLLRETYQKLNQEKRSGSSDFEAR 547
Query: 517 NLTSVDLVR-ASEAHCHYVVVKLFSEKLLKIQ-DKAIQAVLRSLCLLYSLYGISQNAGDF 574
N V R + A VV+ F E + + +++AVL L LY+L+ +S++A
Sbjct: 548 NKCQVSHGRPLALAFVELTVVQRFHEHVHQPSVPPSLRAVLGRLSALYALWSLSRHAALL 607
Query: 575 LQGSIMTEPQITQV-NQRVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLF 633
+G + Q +V V L + ++ DAVALVD D L S +GR DG +Y+NL+
Sbjct: 608 YRGGYFSGEQAGEVLESAVLALCSQLKDDAVALVDVIAPPDFVLDSPIGRADGELYKNLW 667
>gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens]
Length = 624
Score = 248 bits (632), Expect = 2e-65
Identities = 161/477 (33%), Positives = 250/477 (52%), Gaps = 21/477 (4%)
Query: 112 LHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVT 171
++ + +E+ + + +EI G +A TE+ HG++ + + TTA YDP T+EFI++SP
Sbjct: 132 VYSSGSERHLTYIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFE 191
Query: 172 SIKWWPGGLGKTSNHAIVLAQLITKG-KCYGLHAFIVPIREIGTHKPLPGITVGDIGPKF 230
+ K+W G +GKT+ HA+V A+L G +C+GLH FIV IR+ T P+PG+ VGDIG K
Sbjct: 192 AAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKL 251
Query: 231 GYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSN-----KLTYGTMVFVRSFL 285
G + +DNG+ R+PR+++L + V P+GTYV P + + G++ R +
Sbjct: 252 GQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSI 311
Query: 286 VGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVG 345
V A L A IA+R+SA R Q E E +L++ QQ++L P LA YA
Sbjct: 312 VSLAILNLKLAVAIALRFSATRRQFG-PTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFS 370
Query: 346 AYMKETYHRINEGIGQGDLS----EL-PELHALTAGLKAFTSWTANTGIEACRMACGGHG 400
+ + G+ GD S EL E+HAL + K SWT GI+ CR ACGGHG
Sbjct: 371 KSLFLDLVELQRGLASGDRSARQAELGREIHALASASKPLASWTTQQGIQECREACGGHG 430
Query: 401 YSHCSGLPNIYVNFTPSCTFEGENTVMMLQTARFLMKSY-DQVHSG---KLVCGMVSYLN 456
Y + L + + P+CT+EG+N +++ QT+ +L+ QVH G + V +L+
Sbjct: 431 YLAMNRLGVLRDDNDPNCTYEGDNNILLQQTSNYLLGLLAHQVHDGACFRSPLKSVDFLD 490
Query: 457 DLPSQRIQPQQVAVWPTMVDINSPESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAW 516
P Q +V+ ++ D AYK L+ + L +E S A
Sbjct: 491 AYPGILDQKFEVS---SVADCLDSAVALAAYKWLVCYLLRETYQKLNQEKRSGSSDFEAR 547
Query: 517 NLTSVDLVR-ASEAHCHYVVVKLFSEKLLKIQ-DKAIQAVLRSLCLLYSLYGISQNA 571
N V R + A VV+ F E + + +++AVL L LY+L+ +S++A
Sbjct: 548 NKCQVSHGRPLALAFVELTVVQRFHEHVHQPSVPPSLRAVLGRLSALYALWSLSRHA 604
>gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens]
Length = 547
Score = 214 bits (546), Expect = 2e-55
Identities = 155/493 (31%), Positives = 240/493 (48%), Gaps = 15/493 (3%)
Query: 106 MFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFIL 165
+F + + + E ++F P + G +A TE GHG++ RG++T AT+D QEF++
Sbjct: 60 LFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQEFVI 119
Query: 166 NSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGD 225
++P + K + G N+A V AQLI G+ G H FIVP+R+ PG+T D
Sbjct: 120 DTPCENAEKMYIGN-AMYGNYAAVFAQLIIDGRSQGPHCFIVPVRD-ENGSLYPGVTAID 177
Query: 226 IGPKFGYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNK-LTYGTMVFV--- 281
+ K G +DNG L D RIPREN+L K+ V PDG Y P+ NK + M+
Sbjct: 178 MMYKEGLHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHSPIRNKSARFNAMLAALTP 237
Query: 282 -RSFLVGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYA 340
R + +A A+ TIAIRYS R Q K E E +I++ QTQ +L P LATA A
Sbjct: 238 SRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPKTKE-EVKIIEHQTQTLRLMPHLATALA 296
Query: 341 FQFVGAYMKETYHRINEGIGQG-DLSELPELHALTAGLKAFTSWTANTGIEACRMACGGH 399
FV Y ++E + QG +L L AL AGLKA+++W ++ CR GG
Sbjct: 297 LTFVSRYAGAL---LDEDVFQGKELVNSRSLQALVAGLKAYSTWENIRCLQDCRECTGGM 353
Query: 400 GYSHCSGLPNIYVNFTPSCTFEGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLP 459
GY + + + + TFEG++ VM+ R L+ Y + + K + G++ +
Sbjct: 354 GYMMENRISGLKCDTDVFATFEGDDVVMLQVVGRELLAQYTKQYEEKPLFGLLQNWAESV 413
Query: 460 SQRIQPQQVAVWPTMVDINSPESLTEAYKLRAARLVE-IAAKNLQKEVIHRKSKEVAWNL 518
+++ +A M ++ L +A K R L + A+ K ++ AWN
Sbjct: 414 GDKLRTSFLAF--NMDTVDDLAFLLKAVKFRERVLQRGLVARIYYKVKTKKEDFFHAWNS 471
Query: 519 TSVDLVRASEAHCHYVVVKLFSEKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGS 578
+ S AH H V ++ FS + D+ Q +L CLLY + Q +L+
Sbjct: 472 CLHHVASLSLAHTHRVTLEQFSLAVKSCPDQEDQTLLMKFCLLYGTKLVFQERAWYLEHK 531
Query: 579 IMTEPQITQVNQR 591
+T T++ +
Sbjct: 532 YLTPMASTRIRNQ 544
>gi|218563752 acyl-Coenzyme A oxidase-like 1 [Homo sapiens]
Length = 580
Score = 196 bits (499), Expect = 4e-50
Identities = 151/513 (29%), Positives = 237/513 (46%), Gaps = 45/513 (8%)
Query: 106 MFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFIL 165
+F + + + E ++F P + G +A TE GHG++ RG++T AT+D QEF++
Sbjct: 60 LFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQEFVI 119
Query: 166 NSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGD 225
++P + K + G N+A V AQLI G+ G H FIVP+R+ PG+T D
Sbjct: 120 DTPCENAEKMYIGN-AMYGNYAAVFAQLIIDGRSQGPHCFIVPVRD-ENGSLYPGVTAID 177
Query: 226 IGPKFGYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLT-YGTMVFV--- 281
+ K G +DNG L D RIPREN+L K+ V PDG Y P+ NK + M+
Sbjct: 178 MMYKEGLHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHSPIRNKSARFNAMLAALTP 237
Query: 282 -RSFLVGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYA 340
R + +A A+ TIAIRYS R Q K E E +I++ QTQ +L P LATA A
Sbjct: 238 SRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPKTKE-EVKIIEHQTQTLRLMPHLATALA 296
Query: 341 FQFVGAYMKETYHRINEGIGQG-DLSELPELHALTAGLKAFTSWTANTGIEACRMACGGH 399
FV Y ++E + QG +L L AL AGLKA+++W ++ CR GG
Sbjct: 297 LTFVSRYAGAL---LDEDVFQGKELVNSRSLQALVAGLKAYSTWENIRCLQDCRECTGG- 352
Query: 400 GYSHCSGLPNIYVNFTPSCTFEGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLP 459
+ R L+ Y + + K + G++ +
Sbjct: 353 -----------------------------MVVGRELLAQYTKQYEEKPLFGLLQNWAESV 383
Query: 460 SQRIQPQQVAVWPTMVDINSPESLTEAYKLRAARLVE-IAAKNLQKEVIHRKSKEVAWNL 518
+++ +A M ++ L +A K R L + A+ K ++ AWN
Sbjct: 384 GDKLRTSFLAF--NMDTVDDLAFLLKAVKFRERVLQRGLVARIYYKVKTKKEDFFHAWNS 441
Query: 519 TSVDLVRASEAHCHYVVVKLFSEKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGS 578
+ S AH H V ++ FS + D+ Q +L CLLY + Q +L+
Sbjct: 442 CLHHVASLSLAHTHRVTLEQFSLAVKSCPDQEDQTLLMKFCLLYGTKLVFQERAWYLEHK 501
Query: 579 IMTEPQITQVNQRVKELLTLIRSDAVALVDAFD 611
+T T++ ++ +L ++ DA ++ F+
Sbjct: 502 YLTPMASTRIRNQLLDLCDSVKDDARRVISTFN 534
>gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens]
Length = 517
Score = 187 bits (476), Expect = 2e-47
Identities = 147/493 (29%), Positives = 226/493 (45%), Gaps = 45/493 (9%)
Query: 106 MFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFIL 165
+F + + + E ++F P + G +A TE GHG++ RG++T AT+D QEF++
Sbjct: 60 LFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQEFVI 119
Query: 166 NSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGD 225
++P + K + G N+A V AQLI G+ G H FIVP+R+ PG+T D
Sbjct: 120 DTPCENAEKMYIGN-AMYGNYAAVFAQLIIDGRSQGPHCFIVPVRD-ENGSLYPGVTAID 177
Query: 226 IGPKFGYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNK-LTYGTMVFV--- 281
+ K G +DNG L D RIPREN+L K+ V PDG Y P+ NK + M+
Sbjct: 178 MMYKEGLHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHSPIRNKSARFNAMLAALTP 237
Query: 282 -RSFLVGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYA 340
R + +A A+ TIAIRYS R Q K E E +I++ QTQ +L P LATA A
Sbjct: 238 SRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPKTKE-EVKIIEHQTQTLRLMPHLATALA 296
Query: 341 FQFVGAYMKETYHRINEGIGQG-DLSELPELHALTAGLKAFTSWTANTGIEACRMACGGH 399
FV Y ++E + QG +L L AL AGLKA+++W ++ CR GG
Sbjct: 297 LTFVSRYAGAL---LDEDVFQGKELVNSRSLQALVAGLKAYSTWENIRCLQDCRECTGG- 352
Query: 400 GYSHCSGLPNIYVNFTPSCTFEGENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLP 459
+ R L+ Y + + K + G++ +
Sbjct: 353 -----------------------------MVVGRELLAQYTKQYEEKPLFGLLQNWAESV 383
Query: 460 SQRIQPQQVAVWPTMVDINSPESLTEAYKLRAARLVE-IAAKNLQKEVIHRKSKEVAWNL 518
+++ +A M ++ L +A K R L + A+ K ++ AWN
Sbjct: 384 GDKLRTSFLAF--NMDTVDDLAFLLKAVKFRERVLQRGLVARIYYKVKTKKEDFFHAWNS 441
Query: 519 TSVDLVRASEAHCHYVVVKLFSEKLLKIQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGS 578
+ S AH H V ++ FS + D+ Q +L CLLY + Q +L+
Sbjct: 442 CLHHVASLSLAHTHRVTLEQFSLAVKSCPDQEDQTLLMKFCLLYGTKLVFQERAWYLEHK 501
Query: 579 IMTEPQITQVNQR 591
+T T++ +
Sbjct: 502 YLTPMASTRIRNQ 514
>gi|4557233 short-chain acyl-CoA dehydrogenase precursor [Homo
sapiens]
Length = 412
Score = 49.3 bits (116), Expect = 1e-05
Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 51/343 (14%)
Query: 100 LDLHLGMFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPE 159
+ ++ ++L +L + EQ++ + P + + IG +A +E G+G+ TTA E
Sbjct: 116 MSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTAR--AE 173
Query: 160 TQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLP 219
++LN W ++ A+V A + G+ AF+VP+ P P
Sbjct: 174 GDSWVLNGTKAWITNAW------EASAAVVFASTDRALQNKGISAFLVPM-------PTP 220
Query: 220 GITVGDIGPKFGYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMV 279
G+T+G K G L ++ RIP++++L + + K+ T+
Sbjct: 221 GLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGE-----------PGMGFKIAMQTLD 269
Query: 280 FVRSFLVGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPL---LA 336
R + +A A A+ Y+ ++ + G P + Q Q+KL + L
Sbjct: 270 MGRIGIASQALGIAQTALDCAVNYA----ENRMAFGAP---LTKLQVIQFKLADMALALE 322
Query: 337 TAYAFQFVGAYMKETYHRINEGIGQGDLSELPELHALTAGLKAFTSWTANTGIEACRMAC 396
+A + A +K+ I + +++L A TA ++ I+
Sbjct: 323 SARLLTWRAAMLKDNKKPF---IKEAAMAKLAASEAATA--------ISHQAIQ----IL 367
Query: 397 GGHGYSHCSGLPNIYVNFTPSCTFEGENTVMMLQTARFLMKSY 439
GG GY Y + + +EG + + L A L++SY
Sbjct: 368 GGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSY 410
>gi|21361497 acyl-Coenzyme A dehydrogenase family, member 9 [Homo
sapiens]
Length = 621
Score = 48.5 bits (114), Expect = 2e-05
Identities = 115/562 (20%), Positives = 211/562 (37%), Gaps = 93/562 (16%)
Query: 71 VKKMREFGIADPDEI--MWFKNFVHRGRPEPLDLHLGMFLPTLLHQA----------TAE 118
+K + FG+ P+E + F N ++ E + + + + HQA T E
Sbjct: 101 LKSLGLFGLQVPEEYGGLGFSNTMYSRLGEIISMDGSITVTLAAHQAIGLKGIILAGTEE 160
Query: 119 QQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPG 178
Q+ ++ + E I + TE G+ + + AT + + +ILN V G
Sbjct: 161 QKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITN---G 217
Query: 179 GLGKT----SNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDE 234
GL + +V + K K + AFIV R+ G G+T G K G
Sbjct: 218 GLANIFTVFAKTEVVDSDGSVKDK---ITAFIVE-RDFG------GVTNGKPEDKLGIRG 267
Query: 235 IDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALS 294
+ + +N +IP EN+L + G K N L G R + A L
Sbjct: 268 SNTCEVHFENTKIPVENILGEV------GDGFKVAMNILNSG-----RFSMGSVVAGLLK 316
Query: 295 KACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHR 354
+ + Y+ R Q + E F L+ +A AY+ E+
Sbjct: 317 RLIEMTAEYACTRKQFNKRLSE---------------FGLIQEKFALMAQKAYVMESMTY 361
Query: 355 INEGIGQGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNF 414
+ G+ D P+ A +K F+S A + GG GY+ I +
Sbjct: 362 LTAGM--LDQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDT 419
Query: 415 TPSCTFEGENTVMMLQTARFLMKSYDQVHSGKLVC--------GMVSYLNDLPSQRIQP- 465
FEG N ++ + A ++ H+G+++ VS + D +R++
Sbjct: 420 RILLIFEGTNEILRMYIALTGLQ-----HAGRILTTRIHELKQAKVSTVMDTVGRRLRDS 474
Query: 466 -----------QQVAVWPTMVD-INSPESLTEAYKLRAARLVEIAAKNLQKE-VIHRKSK 512
V P++ D N E T + L+ K + +E ++ ++
Sbjct: 475 LGRTVDLGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVA 534
Query: 513 EVAWNLTSVDLVRASEAHCHYVVVKLFSEKLLKIQDKAIQAVLRSLCLLYSLYGISQNAG 572
+ NL + V + + + ++ ++L ++A L++ L+SL + + A
Sbjct: 535 NILINLYGMTAVLSRASRSIRIGLRNHDHEVLLANTFCVEAYLQN---LFSLSQLDKYAP 591
Query: 573 DFLQGSIMTEPQITQVNQRVKE 594
+ L + QI +V+Q++ E
Sbjct: 592 ENL------DEQIKKVSQQILE 607
>gi|4501859 acyl-Coenzyme A dehydrogenase, short/branched chain
precursor [Homo sapiens]
Length = 432
Score = 40.0 bits (92), Expect = 0.007
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 21/147 (14%)
Query: 110 TLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPT 169
TL+ + E+Q+ ++P E +G++ +E G G+ L+T A D E ++LN
Sbjct: 148 TLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAGAGSDSFALKTRA--DKEGDYYVLNGS- 204
Query: 170 VTSIKWWPGGLGKTSNHA---IVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDI 226
K W ++ HA +V+A + G+ +F+V + PG+ +G
Sbjct: 205 ----KMWI----SSAEHAGLFLVMANVDPTIGYKGITSFLV-------DRDTPGLHIGKP 249
Query: 227 GPKFGYDEIDNGYLKMDNHRIPRENML 253
K G L +N ++P N+L
Sbjct: 250 ENKLGLRASSTCPLTFENVKVPEANIL 276
>gi|4557235 acyl-Coenzyme A dehydrogenase, very long chain isoform 1
precursor [Homo sapiens]
Length = 655
Score = 38.1 bits (87), Expect = 0.026
Identities = 82/401 (20%), Positives = 146/401 (36%), Gaps = 58/401 (14%)
Query: 49 EDLNFLTRSQRYEVAVRKSAIMVKKMREFGIADPDEI--MWFKNFVHRGRPEPLDLH-LG 105
E++N ++ E+ + +K++ FG+ P E+ + N + E + +H LG
Sbjct: 114 EEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLG 173
Query: 106 MFLPTLLHQA----------TAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTAT 155
+ + HQ+ T Q+E++ + E + + TE G+ + T+A
Sbjct: 174 VGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAV 233
Query: 156 YDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLH----AFIVPIRE 211
P + + LN K W G + +T + AF+V
Sbjct: 234 PSPCGKYYTLNGS-----KLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVV---- 284
Query: 212 IGTHKPLPGITVGDIGPKFGYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSN 271
+ GIT G K G + + D R+P EN+L +V + N
Sbjct: 285 ---ERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVL---GEVGSGFKVAMHILN 338
Query: 272 KLTYGTMVFVRSFLVGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKL 331
+G + + G A+A+ A + + GE +I +F Q KL
Sbjct: 339 NGRFGMAAALAGTMRGIIAKAVDHA------------TNRTQFGE---KIHNFGLIQEKL 383
Query: 332 FPLLATAYAFQFVGAYMKETYHRINEGIGQGDLSELPELHALTAGLKAFTSWTANTGIEA 391
++ Y + + AYM ++ + QG + A K F S A +
Sbjct: 384 ARMVMLQYVTESM-AYM------VSANMDQG----ATDFQIEAAISKIFGSEAAWKVTDE 432
Query: 392 CRMACGGHGYSHCSGLPNIYVNFTPSCTFEGENTVMMLQTA 432
C GG G+ G+ + + FEG N ++ L A
Sbjct: 433 CIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVA 473
>gi|76496475 acyl-Coenzyme A dehydrogenase, very long chain isoform
2 precursor [Homo sapiens]
Length = 633
Score = 38.1 bits (87), Expect = 0.026
Identities = 82/401 (20%), Positives = 146/401 (36%), Gaps = 58/401 (14%)
Query: 49 EDLNFLTRSQRYEVAVRKSAIMVKKMREFGIADPDEI--MWFKNFVHRGRPEPLDLH-LG 105
E++N ++ E+ + +K++ FG+ P E+ + N + E + +H LG
Sbjct: 92 EEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLG 151
Query: 106 MFLPTLLHQA----------TAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTAT 155
+ + HQ+ T Q+E++ + E + + TE G+ + T+A
Sbjct: 152 VGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAV 211
Query: 156 YDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLH----AFIVPIRE 211
P + + LN K W G + +T + AF+V
Sbjct: 212 PSPCGKYYTLNGS-----KLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVV---- 262
Query: 212 IGTHKPLPGITVGDIGPKFGYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSN 271
+ GIT G K G + + D R+P EN+L +V + N
Sbjct: 263 ---ERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVL---GEVGSGFKVAMHILN 316
Query: 272 KLTYGTMVFVRSFLVGEAARALSKACTIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKL 331
+G + + G A+A+ A + + GE +I +F Q KL
Sbjct: 317 NGRFGMAAALAGTMRGIIAKAVDHA------------TNRTQFGE---KIHNFGLIQEKL 361
Query: 332 FPLLATAYAFQFVGAYMKETYHRINEGIGQGDLSELPELHALTAGLKAFTSWTANTGIEA 391
++ Y + + AYM ++ + QG + A K F S A +
Sbjct: 362 ARMVMLQYVTESM-AYM------VSANMDQG----ATDFQIEAAISKIFGSEAAWKVTDE 410
Query: 392 CRMACGGHGYSHCSGLPNIYVNFTPSCTFEGENTVMMLQTA 432
C GG G+ G+ + + FEG N ++ L A
Sbjct: 411 CIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVA 451
>gi|187960098 medium-chain acyl-CoA dehydrogenase isoform b
precursor [Homo sapiens]
Length = 425
Score = 37.7 bits (86), Expect = 0.034
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 118 EQQERFFMPAWNLE-IIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWW 176
+QQ++ ++ E ++ Y TE G G+ + G++T A + + E+I+N K W
Sbjct: 143 DQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKA--EKKGDEYIINGQ-----KMW 195
Query: 177 PGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEID 236
GK +N +LA+ K AF I E T PGI +G G D
Sbjct: 196 ITNGGK-ANWYFLLARSDPDPKAPANKAFTGFIVEADT----PGIQIGRKELNMGQRCSD 250
Query: 237 NGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKA 296
+ ++ ++P+EN+L+ DG K T V + VG A RAL +A
Sbjct: 251 TRGIVFEDVKVPKENVLI------GDGAGFKVAMGAFD-KTRPVVAAGAVGLAQRALDEA 303
Query: 297 CTIAI 301
A+
Sbjct: 304 TKYAL 308
>gi|4557231 medium-chain acyl-CoA dehydrogenase isoform a precursor
[Homo sapiens]
Length = 421
Score = 37.7 bits (86), Expect = 0.034
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 118 EQQERFFMPAWNLE-IIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWW 176
+QQ++ ++ E ++ Y TE G G+ + G++T A + + E+I+N K W
Sbjct: 139 DQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKA--EKKGDEYIINGQ-----KMW 191
Query: 177 PGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEID 236
GK +N +LA+ K AF I E T PGI +G G D
Sbjct: 192 ITNGGK-ANWYFLLARSDPDPKAPANKAFTGFIVEADT----PGIQIGRKELNMGQRCSD 246
Query: 237 NGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGEAARALSKA 296
+ ++ ++P+EN+L+ DG K T V + VG A RAL +A
Sbjct: 247 TRGIVFEDVKVPKENVLI------GDGAGFKVAMGAFD-KTRPVVAAGAVGLAQRALDEA 299
Query: 297 CTIAI 301
A+
Sbjct: 300 TKYAL 304
>gi|4501857 long-chain acyl-CoA dehydrogenase precursor [Homo
sapiens]
Length = 430
Score = 35.8 bits (81), Expect = 0.13
Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 17/171 (9%)
Query: 85 IMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHG 144
I+W + +H G+ + + + + EQ + F + IG A TE G G
Sbjct: 119 IVWEEQAYSNCSGPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAG 178
Query: 145 THLRGLETTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLA--QLITKGKCYGL 202
+ L+G++T A D ++ILN V G S+ IV+A +G+
Sbjct: 179 SDLQGIKTNAKKD--GSDWILNGSKVFISN------GSLSDVVIVVAVTNHEAPSPAHGI 230
Query: 203 HAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGYLKMDNHRIPRENML 253
F+V + G G K G D L ++ R+P +L
Sbjct: 231 SLFLV-------ENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALL 274
>gi|28373122 contactin 4 isoform a precursor [Homo sapiens]
Length = 1026
Score = 35.0 bits (79), Expect = 0.22
Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 13/169 (7%)
Query: 16 PELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNF---LTRSQRYEVAVRKSAIM-- 70
P ++ DG P + RR N IL P+FQ ED + + R + R
Sbjct: 255 PTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYA 314
Query: 71 ----VKKMREFGIADPDEIMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQQERFFMP 126
++K+ + +A + + W GRP+P L P L +Q +
Sbjct: 315 QPNWIQKINDIHVAMEENVFW--ECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNIT 372
Query: 127 AWNLEIIGTY-AQTEMGHGTHLRGLE-TTATYDPETQEFILNSPTVTSI 173
NL G Y E HG E + P+ +L T+ +
Sbjct: 373 IVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKV 421
>gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor
[Homo sapiens]
Length = 438
Score = 33.9 bits (76), Expect = 0.49
Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 92 VHRGRPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLE 151
V G + + + + + + EQ++++ E++G + TE G+ +E
Sbjct: 133 VDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSME 192
Query: 152 TTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIRE 211
T A Y+ + + LN K W + + + + + C IR
Sbjct: 193 TRAHYNSSNKSYTLNGT-----KTW---ITNSPMADLFVVWARCEDGC---------IRG 235
Query: 212 IGTHKPLPGITVGDIGPKFGYDEIDNGYLKMDNHRIPRENML 253
K + G++ I KF G + MD +P EN+L
Sbjct: 236 FLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVL 277
>gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor
[Homo sapiens]
Length = 428
Score = 33.9 bits (76), Expect = 0.49
Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 92 VHRGRPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLE 151
V G + + + + + + EQ++++ E++G + TE G+ +E
Sbjct: 133 VDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSME 192
Query: 152 TTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIRE 211
T A Y+ + + LN K W + + + + + C IR
Sbjct: 193 TRAHYNSSNKSYTLNGT-----KTW---ITNSPMADLFVVWARCEDGC---------IRG 235
Query: 212 IGTHKPLPGITVGDIGPKFGYDEIDNGYLKMDNHRIPRENML 253
K + G++ I KF G + MD +P EN+L
Sbjct: 236 FLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVL 277
>gi|13470094 apolipoprotein L5 [Homo sapiens]
Length = 433
Score = 30.8 bits (68), Expect = 4.2
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 591 RVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESY 650
++ L++ + SD ++ F F+++ DGN+ E + PL+K E+ ++
Sbjct: 58 KINNLMSTVHSDEAGMLSYFLFEELMRCDKDSMPDGNLSEEEKLFLSYFPLHKFELEQNI 117
Query: 651 KHLKSLQSKL 660
K L +L ++
Sbjct: 118 KELNTLADQV 127
>gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens]
Length = 218
Score = 30.0 bits (66), Expect = 7.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 236 DNGYLKMDNHRIPRENML----MKYAQVKPDGTYVKPLSNKL 273
D+ LK++N R+PRENM ++ + PD VKP ++
Sbjct: 132 DSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQM 173
>gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 30.0 bits (66), Expect = 7.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 236 DNGYLKMDNHRIPRENML----MKYAQVKPDGTYVKPLSNKL 273
D+ LK++N R+PRENM ++ + PD VKP ++
Sbjct: 236 DSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQM 277
>gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 30.0 bits (66), Expect = 7.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 236 DNGYLKMDNHRIPRENML----MKYAQVKPDGTYVKPLSNKL 273
D+ LK++N R+PRENM ++ + PD VKP ++
Sbjct: 236 DSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQM 277
>gi|31377650 transmembrane protein 25 isoform 1 [Homo sapiens]
Length = 366
Score = 30.0 bits (66), Expect = 7.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 236 DNGYLKMDNHRIPRENML----MKYAQVKPDGTYVKPLSNKL 273
D+ LK++N R+PRENM ++ + PD VKP ++
Sbjct: 280 DSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQM 321
>gi|27886593 PTK2 protein tyrosine kinase 2 isoform b [Homo sapiens]
Length = 1074
Score = 30.0 bits (66), Expect = 7.1
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 428 MLQTARFLMKSYDQVH-----SGKLVCGMVSYLNDLPSQRIQPQQVAVW------PTMVD 476
M+QT + + Y H +G + G S L+ S +PQ++A+W T++D
Sbjct: 758 MVQTNHYQVSGYPGSHGITAMAGSIYPGQASLLDQTDSWNHRPQEIAMWQPNVEDSTVLD 817
Query: 477 INS-----PESLTEAYKLRAARLVEIAAKNLQKE 505
+ P L E +R + +E + L+KE
Sbjct: 818 LRGIGQVLPTHLMEERLIRQQQEMEEDQRWLEKE 851
>gi|24476013 PTK2 protein tyrosine kinase 2 isoform a [Homo sapiens]
Length = 1052
Score = 30.0 bits (66), Expect = 7.1
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 428 MLQTARFLMKSYDQVH-----SGKLVCGMVSYLNDLPSQRIQPQQVAVW------PTMVD 476
M+QT + + Y H +G + G S L+ S +PQ++A+W T++D
Sbjct: 736 MVQTNHYQVSGYPGSHGITAMAGSIYPGQASLLDQTDSWNHRPQEIAMWQPNVEDSTVLD 795
Query: 477 INS-----PESLTEAYKLRAARLVEIAAKNLQKE 505
+ P L E +R + +E + L+KE
Sbjct: 796 LRGIGQVLPTHLMEERLIRQQQEMEEDQRWLEKE 829
>gi|221139838 transmembrane protein 25 isoform 4 [Homo sapiens]
Length = 351
Score = 30.0 bits (66), Expect = 7.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 236 DNGYLKMDNHRIPRENML----MKYAQVKPDGTYVKPLSNKL 273
D+ LK++N R+PRENM ++ + PD VKP ++
Sbjct: 280 DSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQM 321
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 29.6 bits (65), Expect = 9.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 613 QDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL 660
+++ LG ++ R++ VY+ + E K L+KAE+ + K L + L
Sbjct: 668 KNLELGKIMDRFEEVVYQAMEEVQKQKELSKAEIQKVLKEKDQLTTDL 715
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,417,120
Number of Sequences: 37866
Number of extensions: 1066779
Number of successful extensions: 2247
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2195
Number of HSP's gapped (non-prelim): 32
length of query: 660
length of database: 18,247,518
effective HSP length: 109
effective length of query: 551
effective length of database: 14,120,124
effective search space: 7780188324
effective search space used: 7780188324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.