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Search of human proteins with 30089916
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo
sapiens]
(963 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo ... 1889 0.0
gi|155029546 phosphofurin acidic cluster sorting protein 2 isofo... 984 0.0
gi|155029548 phosphofurin acidic cluster sorting protein 2 isofo... 979 0.0
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 56 1e-07
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 56 1e-07
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 54 7e-07
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 52 2e-06
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 52 2e-06
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 52 2e-06
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 52 3e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 52 3e-06
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 52 3e-06
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 51 6e-06
gi|210031233 PR domain containing 6 [Homo sapiens] 49 2e-05
gi|148613882 homeobox A4 [Homo sapiens] 48 4e-05
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 48 5e-05
gi|194363768 homeobox D9 [Homo sapiens] 47 7e-05
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap... 47 9e-05
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap... 47 9e-05
gi|182765442 homeobox A10 isoform a [Homo sapiens] 46 1e-04
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 46 1e-04
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 46 1e-04
gi|171543895 ataxin 2 [Homo sapiens] 46 2e-04
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 45 2e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 45 3e-04
gi|228008410 BEN domain containing 4 isoform b [Homo sapiens] 45 3e-04
gi|148762950 BEN domain containing 4 isoform a [Homo sapiens] 45 3e-04
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 45 3e-04
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 45 3e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 44 6e-04
>gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo
sapiens]
Length = 963
Score = 1889 bits (4893), Expect = 0.0
Identities = 963/963 (100%), Positives = 963/963 (100%)
Query: 1 MAERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSST 60
MAERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSST
Sbjct: 1 MAERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSST 60
Query: 61 SAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRL 120
SAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRL
Sbjct: 61 SAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRL 120
Query: 121 FSLTLKKLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIVLPASGLVETELQLTFSLQYP 180
FSLTLKKLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIVLPASGLVETELQLTFSLQYP
Sbjct: 121 FSLTLKKLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIVLPASGLVETELQLTFSLQYP 180
Query: 181 HFLKRDANKLQIMLQRRKRYKNRTILGYKTLAVGLINMAEVMQHPNEGALVLGLHSNVKD 240
HFLKRDANKLQIMLQRRKRYKNRTILGYKTLAVGLINMAEVMQHPNEGALVLGLHSNVKD
Sbjct: 181 HFLKRDANKLQIMLQRRKRYKNRTILGYKTLAVGLINMAEVMQHPNEGALVLGLHSNVKD 240
Query: 241 VSVPVAEIKIYSLSSQPIDHEGIKSKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQD 300
VSVPVAEIKIYSLSSQPIDHEGIKSKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQD
Sbjct: 241 VSVPVAEIKIYSLSSQPIDHEGIKSKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQD 300
Query: 301 LFYEDEDLRKVKKTRRKLTSTSAITRQPNIKQKFVALLKRFKVSDEVGFGLEHVSREQIR 360
LFYEDEDLRKVKKTRRKLTSTSAITRQPNIKQKFVALLKRFKVSDEVGFGLEHVSREQIR
Sbjct: 301 LFYEDEDLRKVKKTRRKLTSTSAITRQPNIKQKFVALLKRFKVSDEVGFGLEHVSREQIR 360
Query: 361 EVEEDLDELYDSLEMYNPSDSGPEMEETESILSTPKPKLKPFFEGMSQSSSQTEIGSLNS 420
EVEEDLDELYDSLEMYNPSDSGPEMEETESILSTPKPKLKPFFEGMSQSSSQTEIGSLNS
Sbjct: 361 EVEEDLDELYDSLEMYNPSDSGPEMEETESILSTPKPKLKPFFEGMSQSSSQTEIGSLNS 420
Query: 421 KGSLGKDTTSPMELAALEKIKSTWIKNQDDSLTETDTLEITDQDMFGDASTSLVVPEKVK 480
KGSLGKDTTSPMELAALEKIKSTWIKNQDDSLTETDTLEITDQDMFGDASTSLVVPEKVK
Sbjct: 421 KGSLGKDTTSPMELAALEKIKSTWIKNQDDSLTETDTLEITDQDMFGDASTSLVVPEKVK 480
Query: 481 TPMKSSKTDLQGSASPSKVEGVHTPRQKRSTPLKERQLSKPLSERTNSSDSERSPDLGHS 540
TPMKSSKTDLQGSASPSKVEGVHTPRQKRSTPLKERQLSKPLSERTNSSDSERSPDLGHS
Sbjct: 481 TPMKSSKTDLQGSASPSKVEGVHTPRQKRSTPLKERQLSKPLSERTNSSDSERSPDLGHS 540
Query: 541 TQIPRKVVYDQLNQILVSDAALPENVILVNTTDWQGQYVAELLQDQRKPVVCTCSTVEVQ 600
TQIPRKVVYDQLNQILVSDAALPENVILVNTTDWQGQYVAELLQDQRKPVVCTCSTVEVQ
Sbjct: 541 TQIPRKVVYDQLNQILVSDAALPENVILVNTTDWQGQYVAELLQDQRKPVVCTCSTVEVQ 600
Query: 601 AVLSALLTRIQRYCNCNSSMPRPVKVAAVGGQSYLSSILRFFVKSLANKTSDWLGYMRFL 660
AVLSALLTRIQRYCNCNSSMPRPVKVAAVGGQSYLSSILRFFVKSLANKTSDWLGYMRFL
Sbjct: 601 AVLSALLTRIQRYCNCNSSMPRPVKVAAVGGQSYLSSILRFFVKSLANKTSDWLGYMRFL 660
Query: 661 IIPLGSHPVAKYLGSVDSKYSSSFLDSGWRDLFSRSEPPVSEQLDVAGRVMQYVNGAATT 720
IIPLGSHPVAKYLGSVDSKYSSSFLDSGWRDLFSRSEPPVSEQLDVAGRVMQYVNGAATT
Sbjct: 661 IIPLGSHPVAKYLGSVDSKYSSSFLDSGWRDLFSRSEPPVSEQLDVAGRVMQYVNGAATT 720
Query: 721 HQLPVAEAMLTCRHKFPDEDSYQKFIPFIGVVKVGLVEDSPSTAGDGDDSPVVSLTVPST 780
HQLPVAEAMLTCRHKFPDEDSYQKFIPFIGVVKVGLVEDSPSTAGDGDDSPVVSLTVPST
Sbjct: 721 HQLPVAEAMLTCRHKFPDEDSYQKFIPFIGVVKVGLVEDSPSTAGDGDDSPVVSLTVPST 780
Query: 781 SPPSSSGLSRDATATPPSSPSMSSALAIVGSPNSPYGDVIGLQVDYWLGHPGERRREGDK 840
SPPSSSGLSRDATATPPSSPSMSSALAIVGSPNSPYGDVIGLQVDYWLGHPGERRREGDK
Sbjct: 781 SPPSSSGLSRDATATPPSSPSMSSALAIVGSPNSPYGDVIGLQVDYWLGHPGERRREGDK 840
Query: 841 RDASSKNTLKSVFRSVQVSRLPHSGEAQLSGTMAMTVVTKEKNKKVPTIFLSKKPREKEV 900
RDASSKNTLKSVFRSVQVSRLPHSGEAQLSGTMAMTVVTKEKNKKVPTIFLSKKPREKEV
Sbjct: 841 RDASSKNTLKSVFRSVQVSRLPHSGEAQLSGTMAMTVVTKEKNKKVPTIFLSKKPREKEV 900
Query: 901 DSKSQVIEGISRLICSAKQQQTMLRVSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGS 960
DSKSQVIEGISRLICSAKQQQTMLRVSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGS
Sbjct: 901 DSKSQVIEGISRLICSAKQQQTMLRVSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGS 960
Query: 961 KAT 963
KAT
Sbjct: 961 KAT 963
>gi|155029546 phosphofurin acidic cluster sorting protein 2 isoform
2 [Homo sapiens]
Length = 889
Score = 984 bits (2543), Expect = 0.0
Identities = 528/891 (59%), Positives = 659/891 (73%), Gaps = 26/891 (2%)
Query: 87 PGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRLFSLTLKKLVMLKEMDKDLNSVVIAVK 146
PG PG TP P MNL+ATWEVD SS SCVPRL SLTLKKLV+ KE++K+L SVVIAVK
Sbjct: 10 PGAPGALNTPVP--MNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELISVVIAVK 67
Query: 147 LQGSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTIL 206
+QGSKRILRS+EIVLP SG VET+L LTFSLQYPHFLKR+ NKLQIMLQRRKRYKNRTIL
Sbjct: 68 MQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTIL 127
Query: 207 GYKTLAVGLINMAEVMQHPNEGALVLGLHSNVKDVSVPVAEIKIYSLSSQPIDHEGIKSK 266
GYKTLA G I+MAEVMQHP+EG VL L S++K+ V AEI I SLSSQPIDHE +
Sbjct: 128 GYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQ 187
Query: 267 LSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFYEDEDLRKVKKTRRKLTSTSAITR 326
++ DNYSEEE ESFSSEQE SDD + GQDL +D D+ K KK RR + T+++TR
Sbjct: 188 AGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPKKQRRSIVRTTSMTR 247
Query: 327 QPNIKQKFVALLKRFKVSDEVGFGLEHVSREQIREVEEDLDELYDSLEMYNPSDSGPEME 386
Q N KQK VALL+RFKVSDEV E E I E EEDLD LYD+L+M +PSDSGP+ME
Sbjct: 248 QQNFKQKVVALLRRFKVSDEV-LDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSDSGPDME 306
Query: 387 ETESILSTPKPKLKPFFEGMSQSSSQTEIGSLNSKGSLGKDTTSPMELAALEKIKSTWIK 446
+ +S+LSTPKPKL+P+FEG+S SSSQTEIGS++S S K+ SP ++ EK +S +
Sbjct: 307 DDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARS-HKEPPSPADVP--EKTRSLGGR 363
Query: 447 NQDDSLTETDTLEI---------TDQDMFGDASTSLVVPEKVKTPMKSSKTDLQGSASPS 497
DS+++T L + + +AST V E++ + +KT+ S +
Sbjct: 364 QPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLDVFTERLPPSGRITKTESLVIPS-T 422
Query: 498 KVEGVHTPRQKRSTPLKERQLSKPLSERTNSSDSERSPDLGHSTQIPRKVVYDQLNQILV 557
+ EG R+ RST LKERQ ++P +ER NS D+ER PD QIPRK VYDQLN IL+
Sbjct: 423 RSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARSQLQIPRKTVYDQLNHILI 482
Query: 558 SDAALPENVILVNTTDWQGQYVAELLQDQRKPVVCTCSTVEVQAVLSALLTRIQRYCNCN 617
SD LPEN+ILVNT+DWQGQ+++++LQ PVVCTCS +VQA S +++RIQRYCNCN
Sbjct: 483 SDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQRYCNCN 542
Query: 618 SSMPRPVKVAAVGGQSYLSSILRFFVKSLANKTSDWLGYMRFLIIPLGSHPVAKYLGSVD 677
S P PVK+A G Q YLS+ILR FV+ L++KT DWLGYMRFL+IPLGSHPVA+YLGSVD
Sbjct: 543 SQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVARYLGSVD 602
Query: 678 SKYSSSFLDSGWRDLFSR--SEPPVSEQLDVAGRVMQYVNGAATTHQLPVAEAMLTCRHK 735
+Y++ F D WRDLF++ ++ V + D+ R+ QY+ GA HQLP+AEAMLT + K
Sbjct: 603 YRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRITQYIAGANCAHQLPIAEAMLTYKQK 662
Query: 736 FPDEDSYQKFIPFIGVVKVGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSRDATAT 795
PDE+S QKFIPF+GVVKVG+VE S +T+GD DD+ S++PPS+S +++A+ T
Sbjct: 663 SPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPT 722
Query: 796 PPSSPSMSSALAIVGSPNSPYG-DVIGLQVDYW-LGHPGERRREGDKRDAS-SKNTLKSV 852
PPSSPS+S L+ SP+ G +++GLQVDYW P +R+R+ +K+D +KNTLK
Sbjct: 723 PPSSPSVSGGLS---SPSQGVGAELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCT 779
Query: 853 FRSVQVSRLPHSGEAQLSGTMAMTVVTKEKNKKVPTIFLSKKPREKEVDSKSQVIEGISR 912
FRS+QVSRLP SGEA + TM+MTVVTKEKNKKV +FL KK ++K+V+SKSQ IEGISR
Sbjct: 780 FRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKV--MFLPKKAKDKDVESKSQCIEGISR 837
Query: 913 LICSAKQQQTMLRVSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGSKAT 963
LIC+A+QQQ MLRV IDGVE SD+KFFQLAAQW +HVKHFP+ +F SKAT
Sbjct: 838 LICTARQQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHSKAT 888
>gi|155029548 phosphofurin acidic cluster sorting protein 2 isoform
1 [Homo sapiens]
Length = 893
Score = 979 bits (2531), Expect = 0.0
Identities = 529/895 (59%), Positives = 660/895 (73%), Gaps = 30/895 (3%)
Query: 87 PGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRLFSLTLKKLVMLKEMDKDLNSVVIAVK 146
PG PG TP P MNL+ATWEVD SS SCVPRL SLTLKKLV+ KE++K+L SVVIAVK
Sbjct: 10 PGAPGALNTPVP--MNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELISVVIAVK 67
Query: 147 LQGSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTIL 206
+QGSKRILRS+EIVLP SG VET+L LTFSLQYPHFLKR+ NKLQIMLQRRKRYKNRTIL
Sbjct: 68 MQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTIL 127
Query: 207 GYKTLAVGLINMAEVMQHPNEGALVLGLHSNVKDVSVPVAEIKIYSLSSQPIDHEGIKSK 266
GYKTLA G I+MAEVMQHP+EG VL L S++K+ V AEI I SLSSQPIDHE +
Sbjct: 128 GYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQ 187
Query: 267 LSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFYEDEDLRKVKKTRRKLTSTSAITR 326
++ DNYSEEE ESFSSEQE SDD + GQDL +D D+ K KK RR + T+++TR
Sbjct: 188 AGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPKKQRRSIVRTTSMTR 247
Query: 327 QPNIKQKFVALLKRFKVSDEVGFGLEHVSREQIREVEEDLDELYDSLEMYNPSDSGPEME 386
Q N KQK VALL+RFKVSDEV E E I E EEDLD LYD+L+M +PSDSGP+ME
Sbjct: 248 QQNFKQKVVALLRRFKVSDEV-LDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSDSGPDME 306
Query: 387 ETESILSTPKPKLKPFFEGMSQSSSQTEIGSLNSKGSLGKDTTSPMELAALEKIKSTWIK 446
+ +S+LSTPKPKL+P+FEG+S SSSQTEIGS++S S K+ SP ++ EK +S +
Sbjct: 307 DDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARS-HKEPPSPADVP--EKTRSLGGR 363
Query: 447 NQDDSLTETDTLEI---------TDQDMFGDASTSLVVPEKVKTPMKSSKTDLQGSASPS 497
DS+++T L + + +AST V E++ + +KT+ S +
Sbjct: 364 QPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLDVFTERLPPSGRITKTESLVIPS-T 422
Query: 498 KVEGVHTPRQKRSTPLKERQLSKPLSERTNSSDSERSPD----LGHSTQIPRKVVYDQLN 553
+ EG R+ RST LKERQ ++P +ER NS D+ER PD L QIPRK VYDQLN
Sbjct: 423 RSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARSQLQVQLQIPRKTVYDQLN 482
Query: 554 QILVSDAALPENVILVNTTDWQGQYVAELLQDQRKPVVCTCSTVEVQAVLSALLTRIQRY 613
IL+SD LPEN+ILVNT+DWQGQ+++++LQ PVVCTCS +VQA S +++RIQRY
Sbjct: 483 HILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQRY 542
Query: 614 CNCNSSMPRPVKVAAVGGQSYLSSILRFFVKSLANKTSDWLGYMRFLIIPLGSHPVAKYL 673
CNCNS P PVK+A G Q YLS+ILR FV+ L++KT DWLGYMRFL+IPLGSHPVA+YL
Sbjct: 543 CNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVARYL 602
Query: 674 GSVDSKYSSSFLDSGWRDLFSR--SEPPVSEQLDVAGRVMQYVNGAATTHQLPVAEAMLT 731
GSVD +Y++ F D WRDLF++ ++ V + D+ R+ QY+ GA HQLP+AEAMLT
Sbjct: 603 GSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRITQYIAGANCAHQLPIAEAMLT 662
Query: 732 CRHKFPDEDSYQKFIPFIGVVKVGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSRD 791
+ K PDE+S QKFIPF+GVVKVG+VE S +T+GD DD+ S++PPS+S +++
Sbjct: 663 YKQKSPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDDAAPSGSGTLSSTPPSASPAAKE 722
Query: 792 ATATPPSSPSMSSALAIVGSPNSPYG-DVIGLQVDYW-LGHPGERRREGDKRDAS-SKNT 848
A+ TPPSSPS+S L+ SP+ G +++GLQVDYW P +R+R+ +K+D +KNT
Sbjct: 723 ASPTPPSSPSVSGGLS---SPSQGVGAELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNT 779
Query: 849 LKSVFRSVQVSRLPHSGEAQLSGTMAMTVVTKEKNKKVPTIFLSKKPREKEVDSKSQVIE 908
LK FRS+QVSRLP SGEA + TM+MTVVTKEKNKKV +FL KK ++K+V+SKSQ IE
Sbjct: 780 LKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKV--MFLPKKAKDKDVESKSQCIE 837
Query: 909 GISRLICSAKQQQTMLRVSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGSKAT 963
GISRLIC+A+QQQ MLRV IDGVE SD+KFFQLAAQW +HVKHFP+ +F SKAT
Sbjct: 838 GISRLICTARQQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHSKAT 892
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 56.2 bits (134), Expect = 1e-07
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 27 QSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAP 86
Q P QPPP Q PPQ PK A+ SSSSS+S++++SSSSSS+S+S + + A P
Sbjct: 67 QPPPQPPPPQYDY-PPQSTFKPK-AEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDP 124
Query: 87 PGGPGPGRTPAPV 99
P P G P P+
Sbjct: 125 PLPPAFGAPPPPL 137
Score = 33.1 bits (74), Expect = 1.3
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 33 PPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAV-ASGSAPPGGPG 91
PP P PP A ++S++T+AA ++ SS +T +A A A GSA P G G
Sbjct: 278 PPAAGGPPQPGPHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAGVG 337
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 56.2 bits (134), Expect = 1e-07
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 27 QSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAP 86
Q P QPPP Q PPQ PK A+ SSSSS+S++++SSSSSS+S+S + + A P
Sbjct: 67 QPPPQPPPPQYDY-PPQSTFKPK-AEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDP 124
Query: 87 PGGPGPGRTPAPV 99
P P G P P+
Sbjct: 125 PLPPAFGAPPPPL 137
Score = 33.1 bits (74), Expect = 1.3
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 33 PPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAV-ASGSAPPGGPG 91
PP P PP A ++S++T+AA ++ SS +T +A A A GSA P G G
Sbjct: 278 PPAAGGPPQPGPHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAGVG 337
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 53.9 bits (128), Expect = 7e-07
Identities = 40/116 (34%), Positives = 48/116 (41%), Gaps = 25/116 (21%)
Query: 4 RGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQ--QQQPPQQPTP-------------- 47
RG G GPG +G Q QQPPPQQ QQ PP QP P
Sbjct: 44 RGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
Query: 48 -----PKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAP 98
P +AQ + +A +SSS+ +T SG+ P GPGP TP P
Sbjct: 104 QDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPT----SGAPPGSGPGPTPTPPP 155
Score = 30.4 bits (67), Expect = 8.3
Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 4/79 (5%)
Query: 22 GSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSA----AAASSSSSSTSTSMA 77
GSG +P PP PTPP T+ + AA
Sbjct: 144 GSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPG 203
Query: 78 VAVASGSAPPGGPGPGRTP 96
G PGGP PG P
Sbjct: 204 PGGPKGGKMPGGPKPGGGP 222
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 52.4 bits (124), Expect = 2e-06
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 37/151 (24%)
Query: 6 GAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQ---------QQQQPPQQPTPPKLAQATSS 56
G GGG G GGG G G G +P TP + +SS
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSS 142
Query: 57 SSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGR----TPAPVQMN---------- 102
SSS+S++++SSSSSS+S+S + GP PG+ TP+PV+
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSC----------GPLPGKPVYSTPSPVENTPQNNECKMVD 192
Query: 103 ----LYATWEVDRSSSSCVPRLFSLTLKKLV 129
A++ V+ C+P+ F L LK LV
Sbjct: 193 LRGAKVASFTVEGCELICLPQAFDLFLKHLV 223
Score = 33.9 bits (76), Expect = 0.75
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 41 PPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASG 83
PP Q PP+ +TS+SSS + + SS++SS + S+ +SG
Sbjct: 9 PPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSG 51
Score = 32.0 bits (71), Expect = 2.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 32 PPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTS----------TSMAVAVA 81
PP Q QPP + TS+SS+TS+ A S ++S S A A A
Sbjct: 9 PPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAA 68
Query: 82 SGSAPPGGPGPG 93
+ ++ GG G G
Sbjct: 69 TVTSTGGGGGGG 80
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 52.4 bits (124), Expect = 2e-06
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 37/151 (24%)
Query: 6 GAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQ---------QQQQPPQQPTPPKLAQATSS 56
G GGG G GGG G G G +P TP + +SS
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSS 142
Query: 57 SSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGR----TPAPVQMN---------- 102
SSS+S++++SSSSSS+S+S + GP PG+ TP+PV+
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSC----------GPLPGKPVYSTPSPVENTPQNNECKMVD 192
Query: 103 ----LYATWEVDRSSSSCVPRLFSLTLKKLV 129
A++ V+ C+P+ F L LK LV
Sbjct: 193 LRGAKVASFTVEGCELICLPQAFDLFLKHLV 223
Score = 33.9 bits (76), Expect = 0.75
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 41 PPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASG 83
PP Q PP+ +TS+SSS + + SS++SS + S+ +SG
Sbjct: 9 PPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSG 51
Score = 32.0 bits (71), Expect = 2.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 32 PPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTS----------TSMAVAVA 81
PP Q QPP + TS+SS+TS+ A S ++S S A A A
Sbjct: 9 PPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAA 68
Query: 82 SGSAPPGGPGPG 93
+ ++ GG G G
Sbjct: 69 TVTSTGGGGGGG 80
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 52.4 bits (124), Expect = 2e-06
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 37/151 (24%)
Query: 6 GAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQ---------QQQQPPQQPTPPKLAQATSS 56
G GGG G GGG G G G +P TP + +SS
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSS 142
Query: 57 SSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGR----TPAPVQMN---------- 102
SSS+S++++SSSSSS+S+S + GP PG+ TP+PV+
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSC----------GPLPGKPVYSTPSPVENTPQNNECKMVD 192
Query: 103 ----LYATWEVDRSSSSCVPRLFSLTLKKLV 129
A++ V+ C+P+ F L LK LV
Sbjct: 193 LRGAKVASFTVEGCELICLPQAFDLFLKHLV 223
Score = 33.9 bits (76), Expect = 0.75
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 41 PPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASG 83
PP Q PP+ +TS+SSS + + SS++SS + S+ +SG
Sbjct: 9 PPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSG 51
Score = 32.0 bits (71), Expect = 2.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 32 PPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTS----------TSMAVAVA 81
PP Q QPP + TS+SS+TS+ A S ++S S A A A
Sbjct: 9 PPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAA 68
Query: 82 SGSAPPGGPGPG 93
+ ++ GG G G
Sbjct: 69 TVTSTGGGGGGG 80
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 52.0 bits (123), Expect = 3e-06
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 1 MAERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSST 60
+ E GG GG GGAGGGSG+R G +PQ PPP+ + + + AQ S
Sbjct: 163 LGEGGGGGGEGGGAGGGSGEREGG---APQPPPPRGWRGKGVR-------AQQRGGSGGE 212
Query: 61 SAAAASSSSSSTSTSMAVAVASGSAPPGGPGPG 93
A+ + SSSS+ T + SGS GG G
Sbjct: 213 GASPSPSSSSAGKTPGTGSRNSGSGVAGGGSGG 245
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 52.0 bits (123), Expect = 3e-06
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 28 SPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPP 87
SP P + ++ P +PTP K + +SSSSS+S++++SSSSSS+S+S + + +S S+
Sbjct: 2581 SPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640
Query: 88 GGPGPGRTPAPVQ 100
+P+P +
Sbjct: 2641 SSSSSSSSPSPAK 2653
Score = 47.4 bits (111), Expect = 7e-05
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 29 PQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPG 88
P +P P +++++ + + ++SSSSS+S++++SSSSSS+S+S + +S S P
Sbjct: 2595 PPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SSSSSSPSPA 2652
Query: 89 GPGPGRTPAP 98
PGP P P
Sbjct: 2653 KPGPQALPKP 2662
Score = 42.7 bits (99), Expect = 0.002
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 23 SGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTS-MAVAVA 81
S V + P QQ QP + + ++SSSSS+S++++SSSSSS+S+S + + +
Sbjct: 2504 SDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDS 2563
Query: 82 SGSAPPGGPG------PGRTPAP 98
GS+ P P P TPAP
Sbjct: 2564 EGSSLPVQPEVALKRVPSPTPAP 2586
Score = 32.7 bits (73), Expect = 1.7
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 28 SPQQPPPQQQQQQPPQ-------QP-----TPPKLAQATSSSSSTSAAAASSSSSSTSTS 75
S P P+Q+ Q PP+ QP TPP+ ++++SS + S S +S+S
Sbjct: 780 SGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSS 839
Query: 76 MAVAVASGSAPPGG 89
V SG+ P G
Sbjct: 840 PHPKVKSGTPPRQG 853
Score = 31.6 bits (70), Expect = 3.7
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 16 GGSGQ--RGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTS 73
GGS Q + ++Q P PP + P + +PPK + SSS+ ++ S + S
Sbjct: 375 GGSPQPLATTPLSQEPVNPP---SEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVS 431
Query: 74 TSMAVAVASGSAPPGGPGPG 93
A +S +P P PG
Sbjct: 432 RH---ASSSPESPKPAPAPG 448
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 51.6 bits (122), Expect = 3e-06
Identities = 34/102 (33%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 5 GGAGGGPGGAGGGSGQRGSGV---------AQSPQQPPPQQQQQQPPQQPTPPKLAQATS 55
GG GGG GG+GGG G G G S P + +P + P P +
Sbjct: 2293 GGGGGGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPVRHHPPVL 2352
Query: 56 SSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGP-GPGRTP 96
SS+ S+ A + S TST G+AP GP P R P
Sbjct: 2353 VSSAASSQAEADKMSGTSTPGPSLPPPGAAPEAGPSAPSRRP 2394
Score = 43.9 bits (102), Expect = 7e-04
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 5 GGAGGGPGGAGGGSGQRGSGVAQSPQQ--PPPQQQQQQPPQQPTPPKLAQATSSSSSTSA 62
GG+GGG G GGG+ GSG + P P + +P + P P + SS+ S+
Sbjct: 2300 GGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPVRHHPPVLVSSAASS 2359
Query: 63 AAASSSSSSTSTSMAVAVASGSAP-----------PGGPGPG 93
A + S TST G+AP PG G
Sbjct: 2360 QAEADKMSGTSTPGPSLPPPGAAPEAGPSAPSRRPPGADAEG 2401
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 50.8 bits (120), Expect = 6e-06
Identities = 29/92 (31%), Positives = 36/92 (39%)
Query: 8 GGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASS 67
GGG GG GGG G G P PP Q+ P +P P A + + +A
Sbjct: 11 GGGGGGGGGGVGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALRLALDQLSALG 70
Query: 68 SSSSTSTSMAVAVASGSAPPGGPGPGRTPAPV 99
+ T A G+A GG G P PV
Sbjct: 71 LGGAGDTDEEGAAGDGAAAAGGADGGAAPEPV 102
Score = 32.0 bits (71), Expect = 2.9
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Query: 3 ERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSS-STS 61
E G AG G AGG G +P+ PP P+ PP LA A + S
Sbjct: 79 EEGAAGDGAAAAGGADG------GAAPEPVPPDG-----PEAGAPPTLAPAVAPGSLPLL 127
Query: 62 AAAASSSSSSTSTSMAVAVASGSAP-PGGPGPGRTPAPVQMNLYATWEVDRSSSSCVP 118
AS V +G AP P GP A QM++ + + + + CVP
Sbjct: 128 DPNASPPPPPPPRPSPPDVFAGFAPHPAALGPPTLLAD-QMSVIGSRKKSVNMTECVP 184
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 48.9 bits (115), Expect = 2e-05
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 12 GGAGGGSGQRGSGVAQSPQQ-----PPPQQQQQQPPQQPTPPKLAQATSSSS--STSAAA 64
GGAG G +G+ +PQ PPP ++ +PP P+ A +S+SS ++S+ +
Sbjct: 30 GGAGPLKGSGAAGLLSAPQPLQPPPPPPPPERAEPPPDSLRPRPASLSSASSTPASSSTS 89
Query: 65 ASSSSSSTSTSMAVAVASGSAPP 87
ASS+SS + + A A+A SA P
Sbjct: 90 ASSASSCAAAAAAAALAGLSALP 112
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 48.1 bits (113), Expect = 4e-05
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 2 AERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQ--------QPTPPKLAQA 53
A+ G+GG GG GGG G Q P PP Q Q PQ +PT A
Sbjct: 24 AQHSGSGGADGGPGGGPGY------QQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPR 77
Query: 54 TSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPA 97
T+ + AAA + + T+ G++P P P + PA
Sbjct: 78 TAREPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPA 121
Score = 30.4 bits (67), Expect = 8.3
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 4 RGGAGGG--------PGGAGGGS-GQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQAT 54
RGGA G P A G + G S V Q PQ PPP Q + PP P + A AT
Sbjct: 105 RGGASPGRPPQPEQPPAQAKGPAHGLHASHVLQ-PQLPPPLQPRAVPPAAPRRCEAAPAT 163
Query: 55 SSSSSTSAAAA 65
+ +A A
Sbjct: 164 PGVPAGGSAPA 174
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 47.8 bits (112), Expect = 5e-05
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 10 GPGGAGGGSGQRGSGVAQSPQQ--------PPPQQQQQQPPQQPTPPKLAQATSSSSST- 60
G G GGG G+RG G A P+Q P P P P+PP +A A +++ S+
Sbjct: 14 GTTGGGGGGGRRGLGGA--PRQRVPALLLPPGPPVGGGGPGAPPSPPAVAAAAAAAGSSG 71
Query: 61 -----SAAAASSSSSSTSTSMAVAVASGSAPPG----GPG 91
AAAAS++SSS+++S + + +S S+ P GPG
Sbjct: 72 AGVPGGAAAASAASSSSASSSSSSSSSASSGPALLRVGPG 111
Score = 47.8 bits (112), Expect = 5e-05
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 5 GGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSS------S 58
GG GGG G GG QR + P P PP P A A SS
Sbjct: 18 GGGGGGRRGLGGAPRQRVPALLLPPGPPVGGGGPGAPPSPPAVAAAAAAAGSSGAGVPGG 77
Query: 59 STSAAAASSSSSSTSTSMAVAVASGSA 85
+ +A+AASSSS+S+S+S + + +SG A
Sbjct: 78 AAAASAASSSSASSSSSSSSSASSGPA 104
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 47.4 bits (111), Expect = 7e-05
Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 16/104 (15%)
Query: 5 GGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAA 64
G GG GG GGG G G G + P P + P+ P A A S++SS S+ +
Sbjct: 125 GFPGGAGGGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSS-SSTS 183
Query: 65 ASSSSSSTSTSMAVAVASGSAP---------------PGGPGPG 93
SSSS T S+A S P GG GPG
Sbjct: 184 LSSSSKRTECSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPG 227
>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
sapiens]
Length = 439
Score = 47.0 bits (110), Expect = 9e-05
Identities = 32/99 (32%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 28 SPQQPPPQQQQQQPPQQPTPPKL----AQATSSSSSTSAAAASSSSSSTSTSMAVAVASG 83
+P QPPP QQQ QP P + Q A A + T A
Sbjct: 42 APPQPPPPQQQAQPALAPPSARAVAIETQPAQGELDAVARATGPAPGPTGEREPAAGPGR 101
Query: 84 SAPPGGPGPGRTPAP---VQMNLYATWEVDRSSSSCVPR 119
S P G G G T P V Y W+V R SC PR
Sbjct: 102 SGPGPGLGSGSTSGPADSVMRQDYRAWKVQRPEPSCRPR 140
>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
sapiens]
Length = 813
Score = 47.0 bits (110), Expect = 9e-05
Identities = 32/99 (32%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 28 SPQQPPPQQQQQQPPQQPTPPKL----AQATSSSSSTSAAAASSSSSSTSTSMAVAVASG 83
+P QPPP QQQ QP P + Q A A + T A
Sbjct: 42 APPQPPPPQQQAQPALAPPSARAVAIETQPAQGELDAVARATGPAPGPTGEREPAAGPGR 101
Query: 84 SAPPGGPGPGRTPAP---VQMNLYATWEVDRSSSSCVPR 119
S P G G G T P V Y W+V R SC PR
Sbjct: 102 SGPGPGLGSGSTSGPADSVMRQDYRAWKVQRPEPSCRPR 140
>gi|182765442 homeobox A10 isoform a [Homo sapiens]
Length = 410
Score = 46.2 bits (108), Expect = 1e-04
Identities = 38/108 (35%), Positives = 44/108 (40%), Gaps = 18/108 (16%)
Query: 3 ERGGAGGGPGGAGGGSGQRGSGVA-------------QSPQQPPPQQQQQQPPQQPTPPK 49
E G G GG G G G G G + P PP QQQPP P PP+
Sbjct: 90 EAASPGSGGGGGGLGPGAHGYGPSPIDLWLDAPRSCRMEPPDGPPPPPQQQPPPPPQPPQ 149
Query: 50 LA-QATSSSSSTSAAAASS---SSSSTSTSMAVAVASGSAP-PGGPGP 92
A QATS S + + SS S+ A A+ AP P GP P
Sbjct: 150 PAPQATSCSFAQNIKEESSYCLYDSADKCPKVSATAAELAPFPRGPPP 197
Score = 37.0 bits (84), Expect = 0.089
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 17/101 (16%)
Query: 1 MAERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQ---------------QQQQQPPQQP 45
+++ G G G GGG+ Q G+G P QPP + ++++ P
Sbjct: 216 LSQAYGTAKGYGSGGGGAQQLGAG--PFPAQPPGRGFDLPPALASGSADAARKERALDSP 273
Query: 46 TPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAP 86
PP LA + S A +SSS++ S A + +S ++P
Sbjct: 274 PPPTLACGSGGGSQGDEEAHASSSAAEELSPAPSESSKASP 314
Score = 31.2 bits (69), Expect = 4.9
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 4 RGGAGGGPGGAGGGSG 19
RG AGGG GGAGGG G
Sbjct: 39 RGEAGGGGGGAGGGGG 54
Score = 31.2 bits (69), Expect = 4.9
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 3 ERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPP 34
E GG GGG GG GGG GV P P
Sbjct: 41 EAGGGGGGAGGGGGGGYYAHGGVYLPPAADLP 72
Score = 30.8 bits (68), Expect = 6.4
Identities = 27/108 (25%), Positives = 33/108 (30%), Gaps = 25/108 (23%)
Query: 7 AGGGPGGAGGGSGQRGSGVAQSP-------------------------QQPPPQQQQQQP 41
A G GG GGG G G SP Q PPP Q Q
Sbjct: 92 ASPGSGGGGGGLGPGAHGYGPSPIDLWLDAPRSCRMEPPDGPPPPPQQQPPPPPQPPQPA 151
Query: 42 PQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGG 89
PQ + SS +A ++T+ +A PP G
Sbjct: 152 PQATSCSFAQNIKEESSYCLYDSADKCPKVSATAAELAPFPRGPPPDG 199
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 9 GGPGGAGGGSGQRGSGVAQS--------PQQPPPQQQQQQPPQQPTPPKLAQATSSSSST 60
GG GGGSG +G +Q+ P +PP +++ PP +P + AT+ S +T
Sbjct: 485 GGSSSGGGGSGTASTGGSQAASVITYTAPPRPPKKREYPPPPPEPAATPTSPATAVSPAT 544
Query: 61 SAAAASSSSSS-------------TSTSMAV-AVASGSAPP--GGPGPGRTPAP 98
+A A ++++ T T+ V + G PP G GP + AP
Sbjct: 545 AAGPAMATTTEEAKGRNPRAGRTLTYTAKPVGGIGGGGGPPTGAGRGPSQLQAP 598
Score = 40.4 bits (93), Expect = 0.008
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 45 PTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPV 99
P P A+SSSSS+S++++SSSS+S+S+S +S S+PP P +P V
Sbjct: 76 PNPATTTAASSSSSSSSSSSSSSSSASSSSS-----SSSSSPPPASPPASSPPRV 125
Score = 40.0 bits (92), Expect = 0.010
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 25 VAQSPQQPPPQQQQQQP-PQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASG 83
+ +P PP P P T + ++SSSSS+S+++ASSSSSS+S+S A
Sbjct: 60 LTSAPLPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPA 119
Query: 84 SAPP 87
S+PP
Sbjct: 120 SSPP 123
Score = 39.7 bits (91), Expect = 0.014
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 45 PTPPKLAQA------TSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAP 98
P PP A T+++SS+S++++SSSSSS+S S + + +S S PP P P
Sbjct: 66 PLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRV 125
Query: 99 VQM 101
+++
Sbjct: 126 LEL 128
Score = 37.4 bits (85), Expect = 0.068
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 26 AQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSA 85
A P PPP + PP T A + +S+ S ++ST S A +V + +A
Sbjct: 453 ASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAASVITYTA 512
Query: 86 PPGGPGPGRTPAP 98
PP P P P
Sbjct: 513 PPRPPKKREYPPP 525
Score = 36.6 bits (83), Expect = 0.12
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 760 SPSTAGDGDDSPVVSLTVPSTSPPSSSGLSRDATATPPSSPSMSS---ALAIVGSPNSPY 816
+P+T S S + S+S +SS S +++ PP+SP SS L + G P + +
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAAAF 136
Query: 817 GDVIGLQVDYWLGHPGERRREGDKRDASSKNTLKSVFRSVQVSRLPHSGE 866
DV+ L P G D ++ + ++ R + +SRL GE
Sbjct: 137 SDVLNFIYSARLALP------GGGGDGAAVAEIGALGRRLGISRLQGLGE 180
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 9 GGPGGAGGGSGQRGSGVAQS--------PQQPPPQQQQQQPPQQPTPPKLAQATSSSSST 60
GG GGGSG +G +Q+ P +PP +++ PP +P + AT+ S +T
Sbjct: 485 GGSSSGGGGSGTASTGGSQAASVITYTAPPRPPKKREYPPPPPEPAATPTSPATAVSPAT 544
Query: 61 SAAAASSSSSS-------------TSTSMAV-AVASGSAPP--GGPGPGRTPAP 98
+A A ++++ T T+ V + G PP G GP + AP
Sbjct: 545 AAGPAMATTTEEAKGRNPRAGRTLTYTAKPVGGIGGGGGPPTGAGRGPSQLQAP 598
Score = 40.4 bits (93), Expect = 0.008
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 45 PTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPV 99
P P A+SSSSS+S++++SSSS+S+S+S +S S+PP P +P V
Sbjct: 76 PNPATTTAASSSSSSSSSSSSSSSSASSSSS-----SSSSSPPPASPPASSPPRV 125
Score = 40.0 bits (92), Expect = 0.010
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 25 VAQSPQQPPPQQQQQQP-PQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASG 83
+ +P PP P P T + ++SSSSS+S+++ASSSSSS+S+S A
Sbjct: 60 LTSAPLPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPA 119
Query: 84 SAPP 87
S+PP
Sbjct: 120 SSPP 123
Score = 39.7 bits (91), Expect = 0.014
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 45 PTPPKLAQA------TSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAP 98
P PP A T+++SS+S++++SSSSSS+S S + + +S S PP P P
Sbjct: 66 PLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRV 125
Query: 99 VQM 101
+++
Sbjct: 126 LEL 128
Score = 37.4 bits (85), Expect = 0.068
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 26 AQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSA 85
A P PPP + PP T A + +S+ S ++ST S A +V + +A
Sbjct: 453 ASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAASVITYTA 512
Query: 86 PPGGPGPGRTPAP 98
PP P P P
Sbjct: 513 PPRPPKKREYPPP 525
Score = 36.6 bits (83), Expect = 0.12
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 760 SPSTAGDGDDSPVVSLTVPSTSPPSSSGLSRDATATPPSSPSMSS---ALAIVGSPNSPY 816
+P+T S S + S+S +SS S +++ PP+SP SS L + G P + +
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAAAF 136
Query: 817 GDVIGLQVDYWLGHPGERRREGDKRDASSKNTLKSVFRSVQVSRLPHSGE 866
DV+ L P G D ++ + ++ R + +SRL GE
Sbjct: 137 SDVLNFIYSARLALP------GGGGDGAAVAEIGALGRRLGISRLQGLGE 180
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 45.8 bits (107), Expect = 2e-04
Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 27 QSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSS----TSAAAASSSSSSTSTSMAVA--- 79
Q QQ QQQQQQ QQP PP A S + AAA S SSSS S+S A A
Sbjct: 171 QQQQQQQQQQQQQQQQQQP-PPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATAPSS 229
Query: 80 VASGSAPPGGPGPGR 94
V + ++ G PG GR
Sbjct: 230 VVAATSGGGRPGLGR 244
Score = 42.7 bits (99), Expect = 0.002
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 27 QSPQQPPPQQQQQQPP------QQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAV 80
Q QQ QQQQQQPP ++P L + +++ S S+++ SSSS++ +S+ A
Sbjct: 175 QQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATAPSSVVAAT 234
Query: 81 ASGSAPPGGPGPGR 94
+ G P G G GR
Sbjct: 235 SGGGRP--GLGRGR 246
Score = 30.8 bits (68), Expect = 6.4
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
Query: 18 SGQRGSGVAQSPQQ---PPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTST 74
SG+ G G A P PPP P +Q +PP + S+ + A S
Sbjct: 38 SGRGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRRLLGL 97
Query: 75 S--------MAVAVASGSAPPGGP 90
+ + +AS APP P
Sbjct: 98 GGPPRPFVVLLLPLASPGAPPAAP 121
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 45.4 bits (106), Expect = 2e-04
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 4 RGGAGGGPGGAGGGSGQRGSGVAQSPQQP--PPQQQQQQPPQQPTPPKLAQATSSSSSTS 61
R G GG GGGS R SG++ Q P+ + P P PP + A SS SS
Sbjct: 90 RASLAGSDGGGGGGSA-RSSGISLGYDQRHGSPRSGRSDPRPGPGPPSVGSARSSVSSLG 148
Query: 62 AAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPA 97
+ ++ + + A + S P GP P PA
Sbjct: 149 SRGSAGAYADFLPPGACPAPARSPEPAGPAPFPLPA 184
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 45.1 bits (105), Expect = 3e-04
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 5 GGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSA-- 62
G GGG GG G G+ + + P PPP PP P PP A A + +S A
Sbjct: 49 GSPGGGAGGEGLGAA--AAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPP 106
Query: 63 --AAASSSSSSTSTSMAVAVASGSAP 86
AA + T VA +S +AP
Sbjct: 107 GLAAGPGPAGGAPTPALVAGSSAAAP 132
Score = 42.7 bits (99), Expect = 0.002
Identities = 33/99 (33%), Positives = 40/99 (40%), Gaps = 23/99 (23%)
Query: 7 AGGGPGGA-GGGSGQRGSGVAQS-----PQQPPPQQQQQQPPQQPTPPKLAQATSSSSST 60
AG P G+ GGG+G G G A + P PPP PP P PP A A + +S
Sbjct: 43 AGSSPAGSPGGGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGP 102
Query: 61 SAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPV 99
A +A+G P GG TPA V
Sbjct: 103 PAPPG--------------LAAGPGPAGG---APTPALV 124
Score = 41.6 bits (96), Expect = 0.004
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 15/65 (23%)
Query: 29 PQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPG 88
P PPPQQQQQQ P PP AA + S AV++GS+P G
Sbjct: 5 PPPPPPQQQQQQQQLSPPPP---------------AALAPVSGVVLPAPPAVSAGSSPAG 49
Query: 89 GPGPG 93
PG G
Sbjct: 50 SPGGG 54
Score = 38.9 bits (89), Expect = 0.023
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 27 QSPQQPPPQQQQQQPPQQPTPPKLA-------QATSSSSSTSAAAASSSSSSTSTSMAVA 79
Q P PP QQQQQQ P P LA A + S+ S+ A S + + A
Sbjct: 4 QPPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAA 63
Query: 80 VASGSAPPGGPGPGRTPAP 98
A+ P P P T AP
Sbjct: 64 AAALLLHPPPPPPPATAAP 82
>gi|228008410 BEN domain containing 4 isoform b [Homo sapiens]
Length = 441
Score = 45.1 bits (105), Expect = 3e-04
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 19/194 (9%)
Query: 23 SGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAAS-------------SSS 69
+ V+ S +PPPQQ Q Q P P + A A SSSS + A S S +
Sbjct: 66 AAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPA 125
Query: 70 SSTSTSMAVAVASG---SAPPGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRLFSLTLK 126
+S+S+S A V G +A G G G A ++++ + +D + C R+ SL
Sbjct: 126 ASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQC-SRVLSLLNC 184
Query: 127 KLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRD 186
+L S++ VK +GS R + +T + +QY ++
Sbjct: 185 GGKLLD--SNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQQT 242
Query: 187 ANKLQIMLQRRKRY 200
+ L++ + Y
Sbjct: 243 SAFLRVFTDSLQNY 256
Score = 30.8 bits (68), Expect = 6.4
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 34 PQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGP--- 90
P + PP P P A + SSS + SS A A AS S+P P
Sbjct: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
Query: 91 -GPGRTPA 97
G RTPA
Sbjct: 110 QGHLRTPA 117
Score = 30.4 bits (67), Expect = 8.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 765 GDGDDSPVVSLTVPSTSPPSSSGLSRDATATPPSSPSMSSA 805
G G + S + PS +P +S G R PP+SP+ SS+
Sbjct: 89 GPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSS 129
>gi|148762950 BEN domain containing 4 isoform a [Homo sapiens]
Length = 534
Score = 45.1 bits (105), Expect = 3e-04
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 19/194 (9%)
Query: 23 SGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAAS-------------SSS 69
+ V+ S +PPPQQ Q Q P P + A A SSSS + A S S +
Sbjct: 66 AAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPA 125
Query: 70 SSTSTSMAVAVASG---SAPPGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRLFSLTLK 126
+S+S+S A V G +A G G G A ++++ + +D + C R+ SL
Sbjct: 126 ASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQC-SRVLSLLNC 184
Query: 127 KLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRD 186
+L S++ VK +GS R + +T + +QY ++
Sbjct: 185 GGKLLD--SNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQQT 242
Query: 187 ANKLQIMLQRRKRY 200
+ L++ + Y
Sbjct: 243 SAFLRVFTDSLQNY 256
Score = 30.8 bits (68), Expect = 6.4
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 34 PQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGP--- 90
P + PP P P A + SSS + SS A A AS S+P P
Sbjct: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
Query: 91 -GPGRTPA 97
G RTPA
Sbjct: 110 QGHLRTPA 117
Score = 30.4 bits (67), Expect = 8.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 765 GDGDDSPVVSLTVPSTSPPSSSGLSRDATATPPSSPSMSSA 805
G G + S + PS +P +S G R PP+SP+ SS+
Sbjct: 89 GPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSS 129
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 45.1 bits (105), Expect = 3e-04
Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 42/137 (30%)
Query: 4 RGGAGGGPGGAGGGSGQR-------GSGVAQS----------------------PQQPPP 34
RGG GG+GGG R G G +Q+ QQPPP
Sbjct: 539 RGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPP 598
Query: 35 QQ--QQQQPPQQPTPPKL--------AQATSSSSSTSAAAASSSSSSTSTSMAVAVASGS 84
QQ Q PPQQP PP +T + +S +++++S+ T +S + S S
Sbjct: 599 QQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYS 658
Query: 85 APP---GGPGPGRTPAP 98
PP GG G T P
Sbjct: 659 QPPYNQGGYSQGYTAPP 675
Score = 33.1 bits (74), Expect = 1.3
Identities = 34/143 (23%), Positives = 45/143 (31%), Gaps = 40/143 (27%)
Query: 5 GGAGGGPGGAGGGSGQRGSGVAQS--------------------------------PQQP 32
GG+GGG GG + G G +Q+ P QP
Sbjct: 547 GGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQP 606
Query: 33 PPQQQ--------QQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGS 84
PPQQ + PP T K + SS++TS SS S + G
Sbjct: 607 PPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGG 666
Query: 85 APPGGPGPGRTPAPVQMNLYATW 107
G P P P Y ++
Sbjct: 667 YSQGYTAPPPPPPPPPAYNYGSY 689
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 45.1 bits (105), Expect = 3e-04
Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 42/137 (30%)
Query: 4 RGGAGGGPGGAGGGSGQR-------GSGVAQS----------------------PQQPPP 34
RGG GG+GGG R G G +Q+ QQPPP
Sbjct: 639 RGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPP 698
Query: 35 QQ--QQQQPPQQPTPPKL--------AQATSSSSSTSAAAASSSSSSTSTSMAVAVASGS 84
QQ Q PPQQP PP +T + +S +++++S+ T +S + S S
Sbjct: 699 QQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYS 758
Query: 85 APP---GGPGPGRTPAP 98
PP GG G T P
Sbjct: 759 QPPYNQGGYSQGYTAPP 775
Score = 33.1 bits (74), Expect = 1.3
Identities = 34/143 (23%), Positives = 45/143 (31%), Gaps = 40/143 (27%)
Query: 5 GGAGGGPGGAGGGSGQRGSGVAQS--------------------------------PQQP 32
GG+GGG GG + G G +Q+ P QP
Sbjct: 647 GGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQP 706
Query: 33 PPQQQ--------QQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGS 84
PPQQ + PP T K + SS++TS SS S + G
Sbjct: 707 PPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGG 766
Query: 85 APPGGPGPGRTPAPVQMNLYATW 107
G P P P Y ++
Sbjct: 767 YSQGYTAPPPPPPPPPAYNYGSY 789
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 44.3 bits (103), Expect = 6e-04
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Query: 9 GGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQ-----QPPQQPTPPKLAQATSSSSSTSAA 63
GGP G G ++G + Q+PPPQ QQ P P P +L TS+ ++
Sbjct: 465 GGPPQPGPGPQRQGPPL---QQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQ 521
Query: 64 AASSSSSSTSTSMAVAVASG----SAPPGGPGPGRTPAPVQ 100
AA + S VA G + PP P P R P Q
Sbjct: 522 AAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ 562
Score = 35.0 bits (79), Expect = 0.34
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 7 AGGGPGGAGGGSGQRGSGVAQSPQQP-----PPQQQQQQPPQQ----PTPPKLAQATSSS 57
+G GP AG QR +PQQP PP Q Q + + P P A+ +S
Sbjct: 494 SGLGPP-AGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASP 552
Query: 58 SSTSAAAASSSSSSTSTSMAVAVASGSAPPGG---PGPGRTP 96
S A ++ TS S + APPGG GP + P
Sbjct: 553 SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKP 594
Score = 33.1 bits (74), Expect = 1.3
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 29/110 (26%)
Query: 5 GGAGGGPGGA--GGGSGQRGSGVAQSPQQ--------------PPPQQQQQQPPQQPTPP 48
GG G P S QR +G Q+ +Q PP QQ+Q PPQ+P P
Sbjct: 538 GGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGP 597
Query: 49 KLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAP 98
A + ++ A + T+ P GPGP P P
Sbjct: 598 ----AGPTRQASQAGPVPRTGPPTTQ---------QPRPSGPGPAGRPKP 634
Score = 30.4 bits (67), Expect = 8.3
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 27 QSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTS 75
Q PQ PPP P P P AT+ SS A AAS ++ S +S
Sbjct: 26 QRPQPPPPPPGAHSPGATPGP---GTATAERSSGVAPAASPAAPSPGSS 71
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,792,043
Number of Sequences: 37866
Number of extensions: 1996594
Number of successful extensions: 36981
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 848
Number of HSP's that attempted gapping in prelim test: 21697
Number of HSP's gapped (non-prelim): 11404
length of query: 963
length of database: 18,247,518
effective HSP length: 112
effective length of query: 851
effective length of database: 14,006,526
effective search space: 11919553626
effective search space used: 11919553626
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.