Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NEK11 Sequence: fasta or formatted (470aa) NCBI GI: 41281753
Description:

NIMA-related kinase 11 isoform 2

Referenced in:

Dual-Specificity Protein Kinases

Other entries for this name:
alt prot [645aa] NIMA-related kinase 11 isoform 1
alt prot [599aa] NIMA-related kinase 11 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         26           2
 C cysteine            2.1         10           2
 D aspartate           5.1         24           2
 E glutamate          10.9         51           3
 F phenylalanine       2.6         12           1
 G glycine             4.3         20           1
 H histidine           3.0         14           1
 I isoleucine          5.7         27           2
 K lysine              8.1         38           2
 L leucine            11.9         56           3
 M methionine          3.4         16           1
 N asparagine          4.0         19           2
 P proline             4.0         19           1
 Q glutamine           5.3         25           2
 R arginine            5.1         24           2
 S serine              7.2         34           1
 T threonine           4.0         19           2
 V valine              4.0         19           1
 W tryptophan          0.6          3           1
 Y tyrosine            3.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NIMA-related kinase 11 isoform 2 
NEK11                 0.991   NIMA-related kinase 11 isoform 3 
NEK11                 0.991   NIMA-related kinase 11 isoform 1 
NEK4                  0.223   NIMA-related kinase 4 
NEK3                  0.213   NIMA-related kinase 3 isoform a 
NEK3                  0.213   NIMA-related kinase 3 isoform a 
NEK1                  0.213   NIMA-related kinase 1 
NEK3                  0.211   NIMA-related kinase 3 isoform b 
NEK5                  0.207   NIMA-related kinase 5 
NEK2                  0.170   NIMA-related kinase 2 
NEK8                  0.165   NIMA-related kinase 8 
NEK7                  0.160   NIMA-related kinase 7 
NEK6                  0.155   NIMA-related kinase 6 isoform 1 
NEK6                  0.155   NIMA-related kinase 6 isoform 2 
NEK9                  0.151   NIMA-related kinase 9 
STK24                 0.128   serine/threonine kinase 24 isoform a 
STK24                 0.125   serine/threonine kinase 24 isoform b 
PLK2                  0.122   polo-like kinase 2 
SLK                   0.119   serine/threonine kinase 2 
STK10                 0.119   serine/threonine kinase 10 
PLK1                  0.117   polo-like kinase 1 
CHEK2                 0.115   protein kinase CHK2 isoform c 
CHEK2                 0.115   protein kinase CHK2 isoform a 
STK36                 0.114   serine/threonine kinase 36 
MST4                  0.111   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK25                 0.111   serine/threonine kinase 25 
PLK3                  0.111   polo-like kinase 3 
MAP3K2                0.107   mitogen-activated protein kinase kinase kinase 2 [Ho...
ULK3                  0.107   unc-51-like kinase 3 
MAP3K1                0.104   mitogen-activated protein kinase kinase kinase 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press