Guide to the Human Genome
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Name: NEK6 Sequence: fasta or formatted (347aa) NCBI GI: 222418622
Description:

NIMA-related kinase 6 isoform 1

Referenced in:

Dual-Specificity Protein Kinases

Other entries for this name:
alt prot [313aa] NIMA-related kinase 6 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         20           2
 C cysteine            3.5         12           1
 D aspartate           4.6         16           1
 E glutamate           6.1         21           2
 F phenylalanine       4.0         14           2
 G glycine             5.5         19           2
 H histidine           4.6         16           1
 I isoleucine          5.2         18           2
 K lysine              6.3         22           2
 L leucine             9.5         33           2
 M methionine          4.0         14           2
 N asparagine          3.2         11           2
 P proline             6.3         22           2
 Q glutamine           5.2         18           1
 R arginine            6.3         22           2
 S serine              6.3         22           2
 T threonine           3.2         11           2
 V valine              5.8         20           2
 W tryptophan          1.2          4           1
 Y tyrosine            3.5         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NIMA-related kinase 6 isoform 1 
NEK6                  0.900   NIMA-related kinase 6 isoform 2 
NEK7                  0.662   NIMA-related kinase 7 
NEK1                  0.229   NIMA-related kinase 1 
NEK4                  0.225   NIMA-related kinase 4 
NEK5                  0.225   NIMA-related kinase 5 
NEK8                  0.216   NIMA-related kinase 8 
NEK3                  0.215   NIMA-related kinase 3 isoform b 
NEK3                  0.215   NIMA-related kinase 3 isoform a 
NEK3                  0.215   NIMA-related kinase 3 isoform a 
NEK2                  0.212   NIMA-related kinase 2 
NEK11                 0.203   NIMA-related kinase 11 isoform 2 
NEK11                 0.203   NIMA-related kinase 11 isoform 3 
NEK11                 0.203   NIMA-related kinase 11 isoform 1 
NEK9                  0.203   NIMA-related kinase 9 
STK36                 0.175   serine/threonine kinase 36 
YSK4                  0.170   Yeast Sps1/Ste20-related kinase 4 isoform 1 
YSK4                  0.170   Yeast Sps1/Ste20-related kinase 4 isoform 2 
TAOK2                 0.159   TAO kinase 2 isoform 1 
TAOK2                 0.159   TAO kinase 2 isoform 2 
TAOK3                 0.155   TAO kinase 3 
STK24                 0.152   serine/threonine kinase 24 isoform a 
TAOK1                 0.152   TAO kinase 1 
STK25                 0.152   serine/threonine kinase 25 
STK24                 0.150   serine/threonine kinase 24 isoform b 
CDK2                  0.149   cyclin-dependent kinase 2 isoform 1 
STK4                  0.149   serine/threonine kinase 4 
MAP3K4                0.149   mitogen-activated protein kinase kinase kinase 4 iso...
MAP3K4                0.149   mitogen-activated protein kinase kinase kinase 4 iso...
OXSR1                 0.147   oxidative-stress responsive 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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