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Search of human proteins with 29826335
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29826335 eukaryotic translation initiation factor 2 beta
[Homo sapiens]
(333 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29826335 eukaryotic translation initiation factor 2 beta [Hom... 674 0.0
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 58 1e-08
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 57 2e-08
gi|21361337 eukaryotic translation initiation factor 5 [Homo sap... 53 3e-07
gi|37537716 eukaryotic translation initiation factor 5 [Homo sap... 53 3e-07
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 48 1e-05
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 47 3e-05
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 46 4e-05
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 46 4e-05
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 46 4e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 4e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 46 4e-05
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 45 7e-05
gi|221219020 NYD-SP11 protein [Homo sapiens] 45 9e-05
gi|24415404 MDN1, midasin homolog [Homo sapiens] 44 2e-04
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 44 2e-04
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 44 2e-04
gi|55956788 nucleolin [Homo sapiens] 44 2e-04
gi|118498362 kinectin 1 isoform b [Homo sapiens] 44 3e-04
gi|118498356 kinectin 1 isoform a [Homo sapiens] 44 3e-04
gi|118498368 kinectin 1 isoform c [Homo sapiens] 44 3e-04
gi|33620775 kinectin 1 isoform a [Homo sapiens] 44 3e-04
gi|11225260 DNA topoisomerase I [Homo sapiens] 44 3e-04
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 44 3e-04
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 44 3e-04
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 44 3e-04
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 43 3e-04
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 43 3e-04
gi|4557509 cylicin 2 [Homo sapiens] 42 6e-04
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 42 6e-04
>gi|29826335 eukaryotic translation initiation factor 2 beta [Homo
sapiens]
Length = 333
Score = 674 bits (1738), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED 60
MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED
Sbjct: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED 60
Query: 61 TRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIM 120
TRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIM
Sbjct: 61 TRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIM 120
Query: 121 LGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELL 180
LGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELL
Sbjct: 121 LGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELL 180
Query: 181 NRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQPKHLLAFL 240
NRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQPKHLLAFL
Sbjct: 181 NRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQPKHLLAFL 240
Query: 241 LAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLYFL 300
LAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLYFL
Sbjct: 241 LAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLYFL 300
Query: 301 QCETCHSRCSVASIKTGFQAVTGKRAQLRAKAN 333
QCETCHSRCSVASIKTGFQAVTGKRAQLRAKAN
Sbjct: 301 QCETCHSRCSVASIKTGFQAVTGKRAQLRAKAN 333
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 58.2 bits (139), Expect = 1e-08
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDL 73
KKKKKKK+ +E +T+ EE + + KE E ++K+ + ++T K+ ++
Sbjct: 2 KKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEE---- 57
Query: 74 NFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKF 133
+KK+K+K KK + +E EE ++ + E + +E E G ++KKKK +
Sbjct: 58 ---EEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEE---------GRRRKKKKKRRR 105
Query: 134 PDEDEILEKDEALEDEDNKK 153
+E+E EK + + KK
Sbjct: 106 KEEEE--EKKKKRRRKTKKK 123
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 57.0 bits (136), Expect = 2e-08
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTED-KDLEADEEDTRKKDASDDLDD 72
KKK KK F D E + +++E+Q E K+ + T++ K ++ DEE T D D
Sbjct: 396 KKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEEST-------DADS 448
Query: 73 LNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVK 132
+ KK KK KK + ++ KD K + E TE E DL++ K K+K
Sbjct: 449 EPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNA---ESTEMESDLELKKDKKHSKEKKGS 505
Query: 133 FPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNP 192
D + KD E D + D+ +T GS D EE L + +
Sbjct: 506 KKDIKKDARKD--TESTDAEFDESSKTGFKTSTKIKGS--DTESEESLYKPGAKKKIDES 561
Query: 193 DMVAGEKRKFVMKPPQVVRVGTKKTSF 219
D + + ++ + R+ +KKT+F
Sbjct: 562 DGTSANSKMEGLESKRGFRMSSKKTTF 588
Score = 48.5 bits (114), Expect = 8e-06
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 13 SKKKKK--KKKPFMLDEEGDTQTEETQPSETKEVEPEPTED-KDLEADE--EDTRKKDAS 67
SKK KK KK D + DT++ + + ++K+ + +D K L+ D+ +DT+K S
Sbjct: 310 SKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPES 369
Query: 68 DDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDL--------KIESDVQEPTEPEDDLDI 119
D + + + + + KK D+ ++ K + ++ES + E +D D
Sbjct: 370 TDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDS 429
Query: 120 MLGNKKKKKKNVKFPDED-------EILEKDEALEDEDNKKDD 155
NKK K + + D D + +KDE +D+KKDD
Sbjct: 430 KTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDD 472
Score = 47.8 bits (112), Expect = 1e-05
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 16 KKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTED---KDLEADEEDT------RKKDA 66
KK KK + +++ + ++K+V+ +D KD++ D E T K +
Sbjct: 285 KKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDER 344
Query: 67 SDDLDDLNFFNQKKKKKKTKKIFDIDEAEEG-VKDLKIESDVQEPTEPEDDLDIMLGNKK 125
D D + KKK TKK + + E G KD + +S + DD KK
Sbjct: 345 KDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDD-------KK 397
Query: 126 KKKKNVKFPDEDEI------LEKDEALEDEDNKKDDGISFSNQTGPAWAGSE 171
K K + F + E +KDE + +D+K D+ S N A SE
Sbjct: 398 KDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSE 449
Score = 32.7 bits (73), Expect = 0.46
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 30/141 (21%)
Query: 41 TKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKD 100
TK + + ++ +D E KDA D KK KK KK D+ ++ VK
Sbjct: 281 TKYTKKDTKKNAKKSSDAESEDSKDAKKD--------SKKVKKNVKK----DDKKKDVKK 328
Query: 101 LKIESDVQEPTEPEDDLDIMLGNKK-----KKKKNVKFPDEDEILEKD------------ 143
+D + ++ D KK KKK K+P+ + D
Sbjct: 329 DTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLK 388
Query: 144 EALEDEDNKKD-DGISFSNQT 163
+A +++D KKD I+FS +
Sbjct: 389 KASKNDDKKKDAKKITFSTDS 409
Score = 28.5 bits (62), Expect = 8.7
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 14/134 (10%)
Query: 9 DPTMSKKKKKK-KKPFMLDE---EGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKK 64
D KK +KK KK D+ + E T+ E++ + K+ + ++D KK
Sbjct: 453 DSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDI-KK 511
Query: 65 DASDDLD--DLNFFNQKKKKKKTK-KIFDID-EAEE-----GVKDLKIESDVQEPTEPED 115
DA D + D F K KT KI D E+EE G K ESD +
Sbjct: 512 DARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKPGAKKKIDESDGTSANSKME 571
Query: 116 DLDIMLGNKKKKKK 129
L+ G + KK
Sbjct: 572 GLESKRGFRMSSKK 585
>gi|21361337 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 53.1 bits (126), Expect = 3e-07
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSID-GNNQLVIKGRFQQKQIENVLRRY 274
KT VN D+ K L+R P + + ELG D N++ ++ G + +++++L +
Sbjct: 33 KTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGF 92
Query: 275 IKEYVTCHTCRSPDTILQKDTRLYFL--QCETCHSR 308
IK++V C C +P+T L + + + C+ C R
Sbjct: 93 IKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYR 128
Score = 35.0 bits (79), Expect = 0.093
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 11 TMSKKKKKKKKPFMLDEEGDTQTEET--QPSETKEVEPEPTEDKDLEADEEDTRKKDASD 68
T K+K+KK + E G + ET P E+ P P +E +E+D +D ++
Sbjct: 153 TGKKEKEKKNRKGKDKENGSVSSSETPPPPPPPNEINPPP---HTMEEEEDDDWGEDTTE 209
Query: 69 DLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKK 128
+ Q+++ +DE + K L + D++ E ++ + KKKK+
Sbjct: 210 EA-------QRRR---------MDEISDHAKVLTLSDDLERTIEERVNI-LFDFVKKKKE 252
Query: 129 KNVKFPDEDEILEKDEALE 147
+ V + EI+ + E L+
Sbjct: 253 EGVIDSSDKEIVAEAERLD 271
>gi|37537716 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 53.1 bits (126), Expect = 3e-07
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSID-GNNQLVIKGRFQQKQIENVLRRY 274
KT VN D+ K L+R P + + ELG D N++ ++ G + +++++L +
Sbjct: 33 KTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGF 92
Query: 275 IKEYVTCHTCRSPDTILQKDTRLYFL--QCETCHSR 308
IK++V C C +P+T L + + + C+ C R
Sbjct: 93 IKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYR 128
Score = 35.0 bits (79), Expect = 0.093
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 11 TMSKKKKKKKKPFMLDEEGDTQTEET--QPSETKEVEPEPTEDKDLEADEEDTRKKDASD 68
T K+K+KK + E G + ET P E+ P P +E +E+D +D ++
Sbjct: 153 TGKKEKEKKNRKGKDKENGSVSSSETPPPPPPPNEINPPP---HTMEEEEDDDWGEDTTE 209
Query: 69 DLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKK 128
+ Q+++ +DE + K L + D++ E ++ + KKKK+
Sbjct: 210 EA-------QRRR---------MDEISDHAKVLTLSDDLERTIEERVNI-LFDFVKKKKE 252
Query: 129 KNVKFPDEDEILEKDEALE 147
+ V + EI+ + E L+
Sbjct: 253 EGVIDSSDKEIVAEAERLD 271
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 48.1 bits (113), Expect = 1e-05
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 9 DPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASD 68
+P SK KKKK+K +E D KE+E E + ++AD E K +
Sbjct: 36 EPQKSKGKKKKEKKKQDFDEDDI---------LKELEELSLEAQGIKADRETVAVKPTEN 86
Query: 69 DLDDLNFFNQKKKKKKTKK-IFDIDEAEE-GVKDLKIESDVQEPTE----PEDDLDIMLG 122
+ ++ ++KKK +K KK FD +++EE KD K + + E +DD D
Sbjct: 87 NEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSGSDDDDDF--- 143
Query: 123 NKKKKKKNVKFPDEDEILEKDEALEDEDN-KKDDGISFSNQTGPAWAGSERDYTYEELLN 181
NK KK K ++ + D + EDEDN KK S N +G +G E D +
Sbjct: 144 NKLPKKAKGKAQKSNK--KWDGSEEDEDNSKKIKERSRINSSGE--SGDESDEFLQSRKG 199
Query: 182 RVFNIMREKNPDMVAGEK 199
+ N + P++ +G +
Sbjct: 200 QKKNQKNKPGPNIESGNE 217
Score = 39.7 bits (91), Expect = 0.004
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 2 SGDEM--IFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSET---KEVEPEPTEDKDLEA 56
SGDE +KK +K KP E G+ + + +T K+ E + E K +
Sbjct: 186 SGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDE 245
Query: 57 DEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKI----ESDVQEPTE 112
++ RK ++L+ +Q K+K+ +K + + D + E + PT
Sbjct: 246 EKAKLRKLKEKEELET-GKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTA 304
Query: 113 PEDDLDIMLGNKKKKKKNVKFPDEDE 138
EDD + G+KKKK K K +++E
Sbjct: 305 AEDDNE---GDKKKKDKKKKKGEKEE 327
Score = 38.1 bits (87), Expect = 0.011
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 45 EPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIE 104
E +D DL+A + A+ + + +KKK+KK K+ FD D+ + +++L +E
Sbjct: 10 EDSTKDDIDLDALAAEIEGAGAAKEQEPQKSKGKKKKEKK-KQDFDEDDILKELEELSLE 68
Query: 105 SD---------VQEPTEPEDDLDIMLGNKKKKKKNVK--FPDEDEILEKDEALEDEDNK 152
+ +PTE ++ KKK +K K F D D E LED+D+K
Sbjct: 69 AQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDND-----SEELEDKDSK 122
Score = 37.4 bits (85), Expect = 0.019
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 26 DEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKT 85
+EE + + EE + E++E E E E + E DEED + D D L+ KK K+
Sbjct: 532 EEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLD----KKPSKEM 587
Query: 86 KKIFDIDEAEEGVKD 100
+ D ++ K+
Sbjct: 588 SSDSEYDSDDDRTKE 602
Score = 36.6 bits (83), Expect = 0.032
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 37/166 (22%)
Query: 16 KKKKKKPFMLD-----------------EEGDTQTEETQPSETKEVEPEPTEDKDLE--- 55
KK+KK P L+ E+G + EET P E E E TED L+
Sbjct: 449 KKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPE-EEEDTEDAGLDDWE 507
Query: 56 --ADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEP 113
A +E+T K + N+ + K + +E EE +D + E + +E E
Sbjct: 508 AMASDEETEKVEG----------NKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGES 557
Query: 114 E----DDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDD 155
E D+ D + ++K K + E+ E D+D K++
Sbjct: 558 EGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEE 603
Score = 33.5 bits (75), Expect = 0.27
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 14 KKKKKKKKPFML--------------DEEGDTQTEETQPSETKEVEPEPTEDKDLEADEE 59
K+K+KKK P +EE + EE + +E+E + E++ LE ++
Sbjct: 328 KEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKR 387
Query: 60 DTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDI 119
+ +K+ + + L +K+ K TK + E L V+ P++
Sbjct: 388 ERKKQKEKERKERL----KKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKR 443
Query: 120 MLGNKKKKKKNVKFPDEDEILEKDEALE--DEDNKKDDGISFSNQTGPAWAGSERDYTYE 177
+ KK+K K P + E E E++E + G+ +T P E + T +
Sbjct: 444 PIYEDKKRK---KIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTED 500
Query: 178 ELLNRVFNIMREKNPDMVAGEK 199
L+ + ++ + V G K
Sbjct: 501 AGLDDWEAMASDEETEKVEGNK 522
Score = 32.7 bits (73), Expect = 0.46
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDL 73
KKKK KKK E + + +E + +K E +EE+ +K++ + + L
Sbjct: 313 KKKKDKKKK---KGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRL 369
Query: 74 NFFNQKKK--------KKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKK 125
K+K K++ KK + + E K+ K+ + Q + + K
Sbjct: 370 EELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATL----KL 425
Query: 126 KKKKNVKFPDEDEILEKDEALEDEDNKK 153
+ + V+ P +D + +K ED+ KK
Sbjct: 426 LQAQGVEVPSKDSLPKKRPIYEDKKRKK 453
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 46.6 bits (109), Expect = 3e-05
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 14 KKKKKKKKPFMLD--EEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLD 71
+K KK KK D EE D +T+E +P K + + ++ E +ED RK D+ DD +
Sbjct: 801 EKDKKSKKDERKDKKEERDDETDEPKPKRRKSGDDKDKKEDRDERKKEDKRKDDSKDDDE 860
Query: 72 DLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNV 131
NQ + +D EAEE +D + + D +E T+ +D DI N+ K++
Sbjct: 861 TEEDNNQDE--------YDPMEAEE-AEDEEDDRDEEEMTKRDDKRDI---NRYCKER-- 906
Query: 132 KFPDEDEILEKDEAL 146
P +D+ EK + +
Sbjct: 907 --PSKDKEKEKTQMI 919
Score = 37.7 bits (86), Expect = 0.014
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 43 EVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLK 102
E E + +DK + DE +K++ D+ D+ +K K KK ++ +E K+ K
Sbjct: 795 EKEDKKEKDKKSKKDERKDKKEERDDETDEPKPKRRKSGDDKDKK----EDRDERKKEDK 850
Query: 103 IESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDD 155
+ D ++ E E+D + DE + +E +EA ++ED++ ++
Sbjct: 851 RKDDSKDDDETEEDNN---------------QDEYDPMEAEEAEDEEDDRDEE 888
Score = 37.7 bits (86), Expect = 0.014
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 2 SGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDT 61
SGD+ D + ++KK+ D + D +TEE + E +P E+ + E D+ D
Sbjct: 832 SGDDK--DKKEDRDERKKEDKRKDDSKDDDETEEDNNQD--EYDPMEAEEAEDEEDDRDE 887
Query: 62 RKKDASDDLDDLNFF-----NQKKKKKKTKKI 88
+ DD D+N + ++ K+K+KT+ I
Sbjct: 888 EEMTKRDDKRDINRYCKERPSKDKEKEKTQMI 919
Score = 30.0 bits (66), Expect = 3.0
Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 35 ETQPSETKEVEPEPTEDKDLEAD-EEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDE 93
ET K+ E + + EAD E+D +KD + + + K KT K+ D+ +
Sbjct: 587 ETLSRGYKQQLVEKLQGERKEADGEQDEEEKDDGEAKEISTPTHWSKLDPKTMKVNDLRK 646
Query: 94 AEEG--VKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDN 151
E + ++S + + ++ +K+ +K+ K DED+ + ++ E+E+
Sbjct: 647 ELESRALSSKGLKSQLIARLTKQLKVEEQKEEQKELEKSEKEEDEDDDRKSEDDKEEEER 706
Query: 152 KKDDGI 157
K+ + I
Sbjct: 707 KRQEEI 712
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 46.2 bits (108), Expect = 4e-05
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 9 DPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVE---PEPTEDKDLEADEEDTRKKD 65
D + S + + K+ +EE +EE + SE ++ E PEP E++D A+ D
Sbjct: 1256 DSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 66 ASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKK 125
A DD DD + + KKK+ E + +D+K E VQE + N +
Sbjct: 1316 A-DDEDDGHLESTKKKEL---------EEQPTREDVKEEPGVQE--------SFLDANMQ 1357
Query: 126 KKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELL 180
K ++ +K +E E+ E+E D + G E +T EEL+
Sbjct: 1358 KSREKIKDKEETEL-----DSEEEQPSHDTSVVSEQMAGSEDDHEEDSHTKEELI 1407
Score = 35.0 bits (79), Expect = 0.093
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 10 PTMSKKKKKKKKPFM-------LDEEGDTQTEETQPSETKEVEPEPTEDKDLEADE---E 59
P ++K K+KKPF+ + ++ SET EV EP ED D E E
Sbjct: 1003 PILTKPTLKRKKPFLHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLE 1062
Query: 60 DTRKKDASDDLDDLN-FFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLD 118
T + D ++ +D N F ++ ++ + + D+ + K + + E ++ DD
Sbjct: 1063 PTFEIDEEEEEEDENELFPREYFRRLSSQ--DVLRCQSSSKRKSKDEEEDEESDDADDTP 1120
Query: 119 IMLGNKKKKKKNVK----FPDEDEILEKDEALEDEDNKK 153
I+ +K++VK PD L+K + ++K
Sbjct: 1121 ILKPVSLLRKRDVKNSPLEPDTSTPLKKKKGWPKGKSRK 1159
Score = 34.3 bits (77), Expect = 0.16
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Query: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQ-PSETKEVEPEPTEDKDLEADEE 59
+S + +P +S K +K EE E+ P E KE E E ++ E EE
Sbjct: 1182 VSTQACVIEPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEE 1241
Query: 60 DTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDE----AEEGVKDLKIESDVQEPTEPED 115
+ + N + + K ++ + +E +EE + + + +++EP EPE+
Sbjct: 1242 EDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEP-EPEE 1300
Query: 116 DLDIMLGNKKKKKKNVKFPDEDEI-LEKDEALEDEDNKKD 154
+ D + + D+ + K + LE++ ++D
Sbjct: 1301 EEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTRED 1340
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 46.2 bits (108), Expect = 4e-05
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 9 DPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVE---PEPTEDKDLEADEEDTRKKD 65
D + S + + K+ +EE +EE + SE ++ E PEP E++D A+ D
Sbjct: 1256 DSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 66 ASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKK 125
A DD DD + + KKK+ E + +D+K E VQE + N +
Sbjct: 1316 A-DDEDDGHLESTKKKEL---------EEQPTREDVKEEPGVQE--------SFLDANMQ 1357
Query: 126 KKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELL 180
K ++ +K +E E+ E+E D + G E +T EEL+
Sbjct: 1358 KSREKIKDKEETEL-----DSEEEQPSHDTSVVSEQMAGSEDDHEEDSHTKEELI 1407
Score = 35.0 bits (79), Expect = 0.093
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 10 PTMSKKKKKKKKPFM-------LDEEGDTQTEETQPSETKEVEPEPTEDKDLEADE---E 59
P ++K K+KKPF+ + ++ SET EV EP ED D E E
Sbjct: 1003 PILTKPTLKRKKPFLHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLE 1062
Query: 60 DTRKKDASDDLDDLN-FFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLD 118
T + D ++ +D N F ++ ++ + + D+ + K + + E ++ DD
Sbjct: 1063 PTFEIDEEEEEEDENELFPREYFRRLSSQ--DVLRCQSSSKRKSKDEEEDEESDDADDTP 1120
Query: 119 IMLGNKKKKKKNVK----FPDEDEILEKDEALEDEDNKK 153
I+ +K++VK PD L+K + ++K
Sbjct: 1121 ILKPVSLLRKRDVKNSPLEPDTSTPLKKKKGWPKGKSRK 1159
Score = 34.3 bits (77), Expect = 0.16
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Query: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQ-PSETKEVEPEPTEDKDLEADEE 59
+S + +P +S K +K EE E+ P E KE E E ++ E EE
Sbjct: 1182 VSTQACVIEPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEE 1241
Query: 60 DTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDE----AEEGVKDLKIESDVQEPTEPED 115
+ + N + + K ++ + +E +EE + + + +++EP EPE+
Sbjct: 1242 EDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEP-EPEE 1300
Query: 116 DLDIMLGNKKKKKKNVKFPDEDEI-LEKDEALEDEDNKKD 154
+ D + + D+ + K + LE++ ++D
Sbjct: 1301 EEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTRED 1340
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 46.2 bits (108), Expect = 4e-05
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 9 DPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVE---PEPTEDKDLEADEEDTRKKD 65
D + S + + K+ +EE +EE + SE ++ E PEP E++D A+ D
Sbjct: 1256 DSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 66 ASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKK 125
A DD DD + + KKK+ E + +D+K E VQE + N +
Sbjct: 1316 A-DDEDDGHLESTKKKEL---------EEQPTREDVKEEPGVQE--------SFLDANMQ 1357
Query: 126 KKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELL 180
K ++ +K +E E+ E+E D + G E +T EEL+
Sbjct: 1358 KSREKIKDKEETEL-----DSEEEQPSHDTSVVSEQMAGSEDDHEEDSHTKEELI 1407
Score = 35.0 bits (79), Expect = 0.093
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 10 PTMSKKKKKKKKPFM-------LDEEGDTQTEETQPSETKEVEPEPTEDKDLEADE---E 59
P ++K K+KKPF+ + ++ SET EV EP ED D E E
Sbjct: 1003 PILTKPTLKRKKPFLHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLE 1062
Query: 60 DTRKKDASDDLDDLN-FFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLD 118
T + D ++ +D N F ++ ++ + + D+ + K + + E ++ DD
Sbjct: 1063 PTFEIDEEEEEEDENELFPREYFRRLSSQ--DVLRCQSSSKRKSKDEEEDEESDDADDTP 1120
Query: 119 IMLGNKKKKKKNVK----FPDEDEILEKDEALEDEDNKK 153
I+ +K++VK PD L+K + ++K
Sbjct: 1121 ILKPVSLLRKRDVKNSPLEPDTSTPLKKKKGWPKGKSRK 1159
Score = 34.3 bits (77), Expect = 0.16
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Query: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQ-PSETKEVEPEPTEDKDLEADEE 59
+S + +P +S K +K EE E+ P E KE E E ++ E EE
Sbjct: 1182 VSTQACVIEPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEE 1241
Query: 60 DTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDE----AEEGVKDLKIESDVQEPTEPED 115
+ + N + + K ++ + +E +EE + + + +++EP EPE+
Sbjct: 1242 EDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEP-EPEE 1300
Query: 116 DLDIMLGNKKKKKKNVKFPDEDEI-LEKDEALEDEDNKKD 154
+ D + + D+ + K + LE++ ++D
Sbjct: 1301 EEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTRED 1340
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 46.2 bits (108), Expect = 4e-05
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQP-SETKEVEPEPTEDKDLEADEEDTRKKDASDDLDD 72
+K +KK +P + E E+TQ SET E+ E K+ + + +DT KKD+ D+
Sbjct: 1430 EKSEKKTQPHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIP- 1488
Query: 73 LNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVK 132
+ K K+K++ + DI E ++ S+ + P+ +K++ +V
Sbjct: 1489 ----SSKDHKEKSEFVDDITTRREPYDSVEESSESENSPVPQ----------RKRRTSVG 1534
Query: 133 FPDEDEILEKDE--ALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREK 190
DE ++D + E+ED + I S +GSE D L + + +
Sbjct: 1535 SSSSDEYKQEDSQGSGEEEDFIRKQIIEMSADEDA--SGSEDDEFIRNQLKEISSSTESQ 1592
Query: 191 NPDMVAGE 198
+ G+
Sbjct: 1593 KKEETKGK 1600
Score = 30.0 bits (66), Expect = 3.0
Identities = 31/173 (17%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 30 DTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIF 89
+ +EE + E +E+ E + +++E + + K + D D+L ++++ K
Sbjct: 1771 EDSSEEEELREEEELLKEQEKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNL 1830
Query: 90 DIDEAEEGVKDLKIESDVQE----------PTEPEDDLDIMLGNKK--KKKKNVKFP--- 134
E ++L+ ++++E P+ D + +K + +K K P
Sbjct: 1831 SPIEDASPTEELRQAAEMEELHRSSCSEYSPSIESDPEGFEISPEKIIEVQKVYKLPTAV 1890
Query: 135 ------DEDEILEKD---EALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEE 178
DE I++K+ +AL+ + ++ + +++ A +ERD +E+
Sbjct: 1891 SLYSPTDEQSIMQKEGSQKALKSAEEMYEEMMHKTHKYKAFPAANERDEVFEK 1943
Score = 28.5 bits (62), Expect = 8.7
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 22 PFMLDEEGD--TQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQK 79
P L +E D T+T + QP +P+ +E +E T K+D D +
Sbjct: 1303 PQSLPKEDDKTTKTIKEQPQPPCTAKPD-----QVEPGKEKTEKEDDKSDT------SSS 1351
Query: 80 KKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEI 139
++ K + + D + +G+ E PT D+ DI+ G KK P
Sbjct: 1352 QQPKSPQGLSDTGYSSDGISSSLGEIPSLIPT---DEKDILKGLKKDSFSQESSPSSPSD 1408
Query: 140 LEKDEA 145
L K E+
Sbjct: 1409 LAKLES 1414
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 46.2 bits (108), Expect = 4e-05
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQP-SETKEVEPEPTEDKDLEADEEDTRKKDASDDLDD 72
+K +KK +P + E E+TQ SET E+ E K+ + + +DT KKD+ D+
Sbjct: 1430 EKSEKKTQPHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIP- 1488
Query: 73 LNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVK 132
+ K K+K++ + DI E ++ S+ + P+ +K++ +V
Sbjct: 1489 ----SSKDHKEKSEFVDDITTRREPYDSVEESSESENSPVPQ----------RKRRTSVG 1534
Query: 133 FPDEDEILEKDE--ALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREK 190
DE ++D + E+ED + I S +GSE D L + + +
Sbjct: 1535 SSSSDEYKQEDSQGSGEEEDFIRKQIIEMSADEDA--SGSEDDEFIRNQLKEISSSTESQ 1592
Query: 191 NPDMVAGE 198
+ G+
Sbjct: 1593 KKEETKGK 1600
Score = 30.0 bits (66), Expect = 3.0
Identities = 31/173 (17%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 30 DTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIF 89
+ +EE + E +E+ E + +++E + + K + D D+L ++++ K
Sbjct: 1771 EDSSEEEELREEEELLKEQEKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNL 1830
Query: 90 DIDEAEEGVKDLKIESDVQE----------PTEPEDDLDIMLGNKK--KKKKNVKFP--- 134
E ++L+ ++++E P+ D + +K + +K K P
Sbjct: 1831 SPIEDASPTEELRQAAEMEELHRSSCSEYSPSIESDPEGFEISPEKIIEVQKVYKLPTAV 1890
Query: 135 ------DEDEILEKD---EALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEE 178
DE I++K+ +AL+ + ++ + +++ A +ERD +E+
Sbjct: 1891 SLYSPTDEQSIMQKEGSQKALKSAEEMYEEMMHKTHKYKAFPAANERDEVFEK 1943
Score = 28.5 bits (62), Expect = 8.7
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 22 PFMLDEEGD--TQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQK 79
P L +E D T+T + QP +P+ +E +E T K+D D +
Sbjct: 1303 PQSLPKEDDKTTKTIKEQPQPPCTAKPD-----QVEPGKEKTEKEDDKSDT------SSS 1351
Query: 80 KKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEI 139
++ K + + D + +G+ E PT D+ DI+ G KK P
Sbjct: 1352 QQPKSPQGLSDTGYSSDGISSSLGEIPSLIPT---DEKDILKGLKKDSFSQESSPSSPSD 1408
Query: 140 LEKDEA 145
L K E+
Sbjct: 1409 LAKLES 1414
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 45.4 bits (106), Expect = 7e-05
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 11 TMSKKKKK--KKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASD 68
TM KKKK KKK ++ T T++T + TKE E E ++K+ E ++E ++K+
Sbjct: 41 TMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKK 100
Query: 69 DLDDLNFFNQKKKKKKTKKI 88
+KKKKKK KK+
Sbjct: 101 K-------KKKKKKKKKKKL 113
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 45.1 bits (105), Expect = 9e-05
Identities = 35/149 (23%), Positives = 79/149 (53%), Gaps = 13/149 (8%)
Query: 9 DPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASD 68
D S++ ++ +LDE ++ ++ E +E E E E++++ +EE+ ++++ +
Sbjct: 2218 DEVESEEHFSEEMESLLDELEKQESLSSEEEEERE-EEEEREEEEVREEEEERKEEEEGE 2276
Query: 69 DLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKK 128
+ +KKKKKK KK ++ E EE V + K E +E TE L ++++++
Sbjct: 2277 EKQVEKEEEEKKKKKKEKKKEEVQEKEE-VFEEKEEIMSEEETE-------SLSDEEEEE 2328
Query: 129 KNVKFPD----EDEILEKDEALEDEDNKK 153
++ + E EIL+K++ + ++ ++
Sbjct: 2329 ESCSLEEEVDREKEILKKEKQFKLQEQRR 2357
Score = 42.0 bits (97), Expect = 8e-04
Identities = 38/168 (22%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSE--TKEVEP---EPTEDKDLEADEEDTRKKDASD 68
+K+K+ K+ E+ +Q +E + E ++E+E E + + L ++EE+ R+++
Sbjct: 2198 RKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEER 2257
Query: 69 DLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIE---SDVQEPTEP-EDDLDIMLGNK 124
+ +++ +++K+++ + +++ EE K K E +VQE E E+ +IM +
Sbjct: 2258 EEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEE 2317
Query: 125 KKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSER 172
+ + + +E LE++ E E KK+ Q + G ER
Sbjct: 2318 TESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRKSLRGRER 2365
Score = 32.7 bits (73), Expect = 0.46
Identities = 29/142 (20%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDL 73
+K K + + EE T+ E + EV + E+ +E +E +
Sbjct: 2144 RKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIEEEEV-------------I 2190
Query: 74 NFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKF 133
F ++ +K+K K D + + + ++ES+ E E LD + + + +
Sbjct: 2191 PFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEE 2250
Query: 134 PDEDEILEKDEALEDEDNKKDD 155
+E+E E++E E+E+ +K++
Sbjct: 2251 REEEEEREEEEVREEEEERKEE 2272
Score = 30.0 bits (66), Expect = 3.0
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 3 GDEMIFDPTMSKKKKKKK---------KPFMLDEEGDTQTEETQPSETKEVEPEPTEDKD 53
G+E + +KKKKKK K + +E+ + +EE ET+ + E E++
Sbjct: 2275 GEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEE----ETESLSDEEEEEES 2330
Query: 54 LEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKK 87
+EE R+K+ Q++K + ++
Sbjct: 2331 CSLEEEVDREKEILKKEKQFKLQEQRRKSLRGRE 2364
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 27 EEGDTQTE----ETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKK 82
EE D E + E +E E TE+ DEED+ D+LD N K ++
Sbjct: 4769 EEADKLDERLWGDDDEEEDEEEEDNKTEETGPGMDEEDSELVAKDDNLDSGNSNKDKSQQ 4828
Query: 83 KKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKK--KKKNVKFPDEDEIL 140
K ++ + + + G + KI + E E+++D GN++K + + + PD+ +
Sbjct: 4829 DKKEEKEEAEADDGGQGEDKINEQIDERDYDENEVDPYHGNQEKVPEPEALDLPDDLNLD 4888
Query: 141 EKDE-ALEDEDNKKDD 155
+D+ ED DN++ +
Sbjct: 4889 SEDKNGGEDTDNEEGE 4904
Score = 43.1 bits (100), Expect = 3e-04
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 25/197 (12%)
Query: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED 60
+ +E + D ++K K+ P D + D + E+ +++ + + D +LE EED
Sbjct: 4693 IGNEEQVEDTFQKGQEKDKEDP---DSKSDIKGEDNAIEMSEDFDGK-MHDGELEEQEED 4748
Query: 61 TRKKDASD-DLDD-LNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEP----- 113
K D+ DLD + N ++ K ++++ D+ EE D + E + E T P
Sbjct: 4749 DEKSDSEGGDLDKHMGDLNGEEADKLDERLWGDDDEEE---DEEEEDNKTEETGPGMDEE 4805
Query: 114 -------EDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDED--NKKDDGISFSNQTG 164
+D+LD NK K +++ K +E E E D+ + ED N++ D +
Sbjct: 4806 DSELVAKDDNLDSGNSNKDKSQQDKK--EEKEEAEADDGGQGEDKINEQIDERDYDENEV 4863
Query: 165 PAWAGSERDYTYEELLN 181
+ G++ E L+
Sbjct: 4864 DPYHGNQEKVPEPEALD 4880
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 15 KKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEE-----DTRKKDASDD 69
K+K ++ +E G+T+T++ + +E E P+ED E +EE D + DA+
Sbjct: 4912 KEKPEEAGHEAEERGETETDQNESQSPQEPEEGPSEDDKAEGEEEMDTGADDQDGDAAQH 4971
Query: 70 LDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPED 115
++ + Q+ ++K K+ D + E G D + +E E D
Sbjct: 4972 PEEHSEEQQQSVEEKDKEA-DEEGGENGPADQGFQPQEEEEREDSD 5016
Score = 28.9 bits (63), Expect = 6.7
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
Query: 21 KPFMLDEEGDTQTEETQPSETKEVEPEPTEDKD----LEADEEDTRKKDASDDLDDLNFF 76
K FM D G+ TE E E +D E EDT +K D +D +
Sbjct: 4658 KEFMEDSAGEGATEFHDYEGGGIGEGEGMKDVSDQIGNEEQVEDTFQKGQEKDKEDPD-- 4715
Query: 77 NQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDE 136
K K ++ E +G + +++E E ++ D G+ K ++ +
Sbjct: 4716 -SKSDIKGEDNAIEMSEDFDGKMH---DGELEEQEEDDEKSDSEGGDLDKHMGDLNGEEA 4771
Query: 137 DEILEKDEALEDEDNKKDDGISFSNQTGP 165
D++ E+ +DE+ +++ + + +TGP
Sbjct: 4772 DKLDERLWGDDDEEEDEEEEDNKTEETGP 4800
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 43.9 bits (102), Expect = 2e-04
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 13 SKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEAD------EEDTRKKDA 66
S KK+ KKK D E + +E++ KE E E K+ E D +ED +K +
Sbjct: 498 SPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQS 557
Query: 67 SDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDD-LDIMLGNKK 125
D + F + +K + E E V D ++E + E +E EDD + +L +
Sbjct: 558 EDGSE--REFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEG 615
Query: 126 KKKKNVKFPDEDEILEK--DEALEDEDNKKDD 155
+++ + DE E E ++ +DE ++K+D
Sbjct: 616 SEREFDEDSDEKEEEEDTYEKVFDDESDEKED 647
Score = 37.4 bits (85), Expect = 0.019
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 20/150 (13%)
Query: 30 DTQTEETQPSETKEVE-PEPTEDKDLEADEEDTRKK---DASDDLDDLNFFNQKKKKKKT 85
D +E+ E E E E +++K+ +EEDT +K D SD+ +D + ++K +
Sbjct: 604 DDGSEKVLDEEGSEREFDEDSDEKE---EEEDTYEKVFDDESDEKEDEEYADEKGLEAAD 660
Query: 86 KKIFDIDEAEEGVKDLKI--ESDVQEPTEPEDDLDIMLGNKK---KKKKNVKFPDEDEIL 140
KK AEEG D K+ ESD +E E D ++ ++K N K DE+E
Sbjct: 661 KK------AEEGDADEKLFEESDDKE-DEDADGKEVEDADEKLFEDDDSNEKLFDEEED- 712
Query: 141 EKDEALEDEDNKKDDGISFSNQTGPAWAGS 170
++ +D D + G S + GP GS
Sbjct: 713 SSEKLFDDSDERGTLGGFGSVEEGPLSTGS 742
Score = 32.0 bits (71), Expect = 0.79
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 3 GDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTR 62
G E FD +K++++ + ++ + E+ + ++ K +E + ++ +ADE+
Sbjct: 615 GSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFE 674
Query: 63 KKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLG 122
+ D +D D + K+ + +K+F+ D++ E + D E D E + D LG
Sbjct: 675 ESDDKEDED----ADGKEVEDADEKLFEDDDSNEKLFD--EEEDSSEKLFDDSDERGTLG 728
Query: 123 NKKKKKKNVKFPDEDEILEKDEALEDED 150
++ IL D+ +D+D
Sbjct: 729 GFGSVEEGPLSTGSSFILSSDD--DDDD 754
Score = 31.6 bits (70), Expect = 1.0
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 35/175 (20%)
Query: 6 MIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEAD------EE 59
M F+ + +KK +K + EEG ++ + S KE E E +K+ E E
Sbjct: 420 MAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAE-EGCPEKESEEGCPKRGFEG 478
Query: 60 DTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDI 119
+K++ + KK+ KK D E G+ E EDDL
Sbjct: 479 SCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGL-----------AKESEDDL-- 525
Query: 120 MLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDY 174
NK+ E+E+ E+ ED+ K+ D Q+ GSER++
Sbjct: 526 ---NKE---------SEEEVGPTKESEEDDSEKESDEDCSEKQSED---GSEREF 565
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 43.9 bits (102), Expect = 2e-04
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 13 SKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEAD------EEDTRKKDA 66
S KK+ KKK D E + +E++ KE E E K+ E D +ED +K +
Sbjct: 498 SPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQS 557
Query: 67 SDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDD-LDIMLGNKK 125
D + F + +K + E E V D ++E + E +E EDD + +L +
Sbjct: 558 EDGSE--REFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEG 615
Query: 126 KKKKNVKFPDEDEILEK--DEALEDEDNKKDD 155
+++ + DE E E ++ +DE ++K+D
Sbjct: 616 SEREFDEDSDEKEEEEDTYEKVFDDESDEKED 647
Score = 37.4 bits (85), Expect = 0.019
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 20/150 (13%)
Query: 30 DTQTEETQPSETKEVE-PEPTEDKDLEADEEDTRKK---DASDDLDDLNFFNQKKKKKKT 85
D +E+ E E E E +++K+ +EEDT +K D SD+ +D + ++K +
Sbjct: 604 DDGSEKVLDEEGSEREFDEDSDEKE---EEEDTYEKVFDDESDEKEDEEYADEKGLEAAD 660
Query: 86 KKIFDIDEAEEGVKDLKI--ESDVQEPTEPEDDLDIMLGNKK---KKKKNVKFPDEDEIL 140
KK AEEG D K+ ESD +E E D ++ ++K N K DE+E
Sbjct: 661 KK------AEEGDADEKLFEESDDKE-DEDADGKEVEDADEKLFEDDDSNEKLFDEEED- 712
Query: 141 EKDEALEDEDNKKDDGISFSNQTGPAWAGS 170
++ +D D + G S + GP GS
Sbjct: 713 SSEKLFDDSDERGTLGGFGSVEEGPLSTGS 742
Score = 32.0 bits (71), Expect = 0.79
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 3 GDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTR 62
G E FD +K++++ + ++ + E+ + ++ K +E + ++ +ADE+
Sbjct: 615 GSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFE 674
Query: 63 KKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLG 122
+ D +D D + K+ + +K+F+ D++ E + D E D E + D LG
Sbjct: 675 ESDDKEDED----ADGKEVEDADEKLFEDDDSNEKLFD--EEEDSSEKLFDDSDERGTLG 728
Query: 123 NKKKKKKNVKFPDEDEILEKDEALEDED 150
++ IL D+ +D+D
Sbjct: 729 GFGSVEEGPLSTGSSFILSSDD--DDDD 754
Score = 31.6 bits (70), Expect = 1.0
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 35/175 (20%)
Query: 6 MIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEAD------EE 59
M F+ + +KK +K + EEG ++ + S KE E E +K+ E E
Sbjct: 420 MAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAE-EGCPEKESEEGCPKRGFEG 478
Query: 60 DTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDI 119
+K++ + KK+ KK D E G+ E EDDL
Sbjct: 479 SCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGL-----------AKESEDDL-- 525
Query: 120 MLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDY 174
NK+ E+E+ E+ ED+ K+ D Q+ GSER++
Sbjct: 526 ---NKE---------SEEEVGPTKESEEDDSEKESDEDCSEKQSED---GSEREF 565
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 43.9 bits (102), Expect = 2e-04
Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 37/162 (22%)
Query: 10 PTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPE---------------PTEDKDL 54
P K K K DEE D +EE + + E E E +ED+D
Sbjct: 130 PAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDD 189
Query: 55 EADEED-TRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEP 113
E DE+D D DD ++ K KK K+ + K++ + D +E E
Sbjct: 190 EDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVK-----AKNVAEDEDEEEDDED 244
Query: 114 EDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDD 155
EDD D DED+ + DE E+E+ ++++
Sbjct: 245 EDDDD----------------DEDDEDDDDEDDEEEEEEEEE 270
Score = 36.2 bits (82), Expect = 0.042
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 4 DEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRK 63
+E + T +K KK K ++ + E+ E E E + ++ D + D+ED +
Sbjct: 207 EEEAMETTPAKGKKAAK---VVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEE 263
Query: 64 KDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGN 123
++ ++ + + K+KK+ K+ +A K K+E TEP ++ +GN
Sbjct: 264 EEEEEEEEPVKEAPGKRKKEMAKQ-----KAAPEAKKQKVEG-----TEPTTAFNLFVGN 313
Query: 124 K--KKKKKNVKFPDEDEILEKDEALED 148
K +K D + D A+ D
Sbjct: 314 LNFNKSAPELKTGISDVFAKNDLAVVD 340
Score = 32.0 bits (71), Expect = 0.79
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 81 KKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEIL 140
K K K D DE E+ D E + + E ED+ +I K DED+
Sbjct: 135 KNGKNAKKEDSDEEED---DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDED 191
Query: 141 EKDEALEDEDNKKDDGISFSNQTGPA 166
++D+ +D+D+++DD + +T PA
Sbjct: 192 DEDDE-DDDDDEEDDSEEEAMETTPA 216
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 43.5 bits (101), Expect = 3e-04
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 5 EMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKK 64
E ++D ++K+K+++K ++ + D + E + ++ KE++ + D E+ D +
Sbjct: 31 ETLYDEVLAKQKREQK---LIPTKTDKKKAEKKKNKKKEIQNGNLHESDSESVPRDFKLS 87
Query: 65 DASDDLDD------LNFF-------NQKKKKKKTKKIFDIDEAEEG----VKDLKIE--S 105
DA DD LN +KKK+KK K + + +E + K+E
Sbjct: 88 DALAVEDDQVAPVPLNVVETSSSVRERKKKEKKQKPVLEEQVIKESDASKIPGKKVEPVP 147
Query: 106 DVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILE-------KDEALEDEDNKKDDGIS 158
++PT P + +KK KN D+D+ +E + EAL K + S
Sbjct: 148 VTKQPTPPSEAAASKKKPGQKKSKNGS-DDQDKKVETLMVPSKRQEALPLHQETKQESGS 206
Query: 159 FSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPD-MVAGEKRKFV--MKPPQVVRV--- 212
+ +E + E L++ I N D +KR+ + +KP QV +
Sbjct: 207 GKKKASSKKQKTENVFVDEPLIHATTYIPLMDNADSSPVVDKREVIDLLKPDQVEGIQKS 266
Query: 213 GTKK 216
GTKK
Sbjct: 267 GTKK 270
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 43.5 bits (101), Expect = 3e-04
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 5 EMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKK 64
E ++D ++K+K+++K ++ + D + E + ++ KE++ + D E+ D +
Sbjct: 31 ETLYDEVLAKQKREQK---LIPTKTDKKKAEKKKNKKKEIQNGNLHESDSESVPRDFKLS 87
Query: 65 DASDDLDD------LNFF-------NQKKKKKKTKKIFDIDEAEEG----VKDLKIE--S 105
DA DD LN +KKK+KK K + + +E + K+E
Sbjct: 88 DALAVEDDQVAPVPLNVVETSSSVRERKKKEKKQKPVLEEQVIKESDASKIPGKKVEPVP 147
Query: 106 DVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILE-------KDEALEDEDNKKDDGIS 158
++PT P + +KK KN D+D+ +E + EAL K + S
Sbjct: 148 VTKQPTPPSEAAASKKKPGQKKSKNGS-DDQDKKVETLMVPSKRQEALPLHQETKQESGS 206
Query: 159 FSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPD-MVAGEKRKFV--MKPPQVVRV--- 212
+ +E + E L++ I N D +KR+ + +KP QV +
Sbjct: 207 GKKKASSKKQKTENVFVDEPLIHATTYIPLMDNADSSPVVDKREVIDLLKPDQVEGIQKS 266
Query: 213 GTKK 216
GTKK
Sbjct: 267 GTKK 270
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 43.5 bits (101), Expect = 3e-04
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 5 EMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKK 64
E ++D ++K+K+++K ++ + D + E + ++ KE++ + D E+ D +
Sbjct: 31 ETLYDEVLAKQKREQK---LIPTKTDKKKAEKKKNKKKEIQNGNLHESDSESVPRDFKLS 87
Query: 65 DASDDLDD------LNFF-------NQKKKKKKTKKIFDIDEAEEG----VKDLKIE--S 105
DA DD LN +KKK+KK K + + +E + K+E
Sbjct: 88 DALAVEDDQVAPVPLNVVETSSSVRERKKKEKKQKPVLEEQVIKESDASKIPGKKVEPVP 147
Query: 106 DVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILE-------KDEALEDEDNKKDDGIS 158
++PT P + +KK KN D+D+ +E + EAL K + S
Sbjct: 148 VTKQPTPPSEAAASKKKPGQKKSKNGS-DDQDKKVETLMVPSKRQEALPLHQETKQESGS 206
Query: 159 FSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPD-MVAGEKRKFV--MKPPQVVRV--- 212
+ +E + E L++ I N D +KR+ + +KP QV +
Sbjct: 207 GKKKASSKKQKTENVFVDEPLIHATTYIPLMDNADSSPVVDKREVIDLLKPDQVEGIQKS 266
Query: 213 GTKK 216
GTKK
Sbjct: 267 GTKK 270
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 43.5 bits (101), Expect = 3e-04
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 5 EMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKK 64
E ++D ++K+K+++K ++ + D + E + ++ KE++ + D E+ D +
Sbjct: 31 ETLYDEVLAKQKREQK---LIPTKTDKKKAEKKKNKKKEIQNGNLHESDSESVPRDFKLS 87
Query: 65 DASDDLDD------LNFF-------NQKKKKKKTKKIFDIDEAEEG----VKDLKIE--S 105
DA DD LN +KKK+KK K + + +E + K+E
Sbjct: 88 DALAVEDDQVAPVPLNVVETSSSVRERKKKEKKQKPVLEEQVIKESDASKIPGKKVEPVP 147
Query: 106 DVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILE-------KDEALEDEDNKKDDGIS 158
++PT P + +KK KN D+D+ +E + EAL K + S
Sbjct: 148 VTKQPTPPSEAAASKKKPGQKKSKNGS-DDQDKKVETLMVPSKRQEALPLHQETKQESGS 206
Query: 159 FSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPD-MVAGEKRKFV--MKPPQVVRV--- 212
+ +E + E L++ I N D +KR+ + +KP QV +
Sbjct: 207 GKKKASSKKQKTENVFVDEPLIHATTYIPLMDNADSSPVVDKREVIDLLKPDQVEGIQKS 266
Query: 213 GTKK 216
GTKK
Sbjct: 267 GTKK 270
>gi|11225260 DNA topoisomerase I [Homo sapiens]
Length = 765
Score = 43.5 bits (101), Expect = 3e-04
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 34/189 (17%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKD----ASDD 69
K+K ++K E D++ + + +TK + + KD D + ++K+ AS D
Sbjct: 40 KEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKEKRKEEKVRASGD 99
Query: 70 L---------------------DDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQ 108
DD F K+ K K+ D D+A+ K +K E +
Sbjct: 100 AKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIKTEDTKK 159
Query: 109 EPTEP-EDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALED------EDNKKDDGI--SF 159
E E++ D L K K K+ K P+ D +K + E+ E+ + +GI F
Sbjct: 160 EKKRKLEEEEDGKLKKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKF 219
Query: 160 SNQTGPAWA 168
GP +A
Sbjct: 220 LEHKGPVFA 228
Score = 41.6 bits (96), Expect = 0.001
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEP---TEDKDLEA- 56
MSGD + D + + D+ D + + + K+ E +E KD E
Sbjct: 1 MSGDHLHNDSQIEADFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKK 60
Query: 57 --DEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAE-EGVKDLKIESDVQEPTEP 113
++E T+ KD S + ++ K+K+K +K+ +A+ + K+ S Q EP
Sbjct: 61 HKEKEKTKHKDGSSEKHKDKHKDRDKEKRKEEKVRASGDAKIKKEKENGFSSPPQIKDEP 120
Query: 114 EDDLDIMLGNKKKKKKNVKFP-DEDEILEKDEALEDEDNKKD 154
EDD + K+ K +K P DED+ K + ++ ED KK+
Sbjct: 121 EDDGYFV--PPKEDIKPLKRPRDEDDADYKPKKIKTEDTKKE 160
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 43.5 bits (101), Expect = 3e-04
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 13 SKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDD 72
S K+KKK++ + E+ ++ + E +E E E E+++ E +EED S
Sbjct: 1380 SYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPG--- 1436
Query: 73 LNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVK 132
K +KK +KI +KD K+ ++ Q + E++ + ++++++ ++
Sbjct: 1437 -------KGRKKIRKI---------LKDDKLRTETQNALKEEEERRKRIAEREREREKLR 1480
Query: 133 FPDEDEILEKDEA 145
E++E ++A
Sbjct: 1481 -----EVIEIEDA 1488
Score = 42.0 bits (97), Expect = 8e-04
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 7 IFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED---TRK 63
+ D ++KK K K + + + ++ SE + + ++ E+++E TR
Sbjct: 1309 VSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRS 1368
Query: 64 KDASDDLDDLNFFNQKKKKKKTKKIFDID-------EAEEGVKDLKIESDVQEPTEPEDD 116
++ ++ + QKKK+++ K D E EE K+ + E + +E E ED+
Sbjct: 1369 AKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDE 1428
Query: 117 LDIMLGNKKKKKKNVKFPDEDEI-LEKDEALEDEDNKK 153
D K +KK K +D++ E AL++E+ ++
Sbjct: 1429 NDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERR 1466
Score = 34.3 bits (77), Expect = 0.16
Identities = 26/128 (20%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 32 QTEETQPSETKEVEPEPTEDKDLEADEE-DTRKKDASDDLDDLNFFNQKKKKKKTKKIFD 90
+ ++T+P E KEV+ E E+ D ++ S+++ + ++++ + ++ K +
Sbjct: 1316 EEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESE--DEQRPRTRSAKKAE 1373
Query: 91 IDEAEEGVKDLKIES--DVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALED 148
++E + K K VQE + E+ N +++++ + +E+E E++E ++
Sbjct: 1374 LEENQRSYKQKKKRRRIKVQEDSSSENK-----SNSEEEEEEKEEEEEEEEEEEEEEEDE 1428
Query: 149 EDNKKDDG 156
D+ K G
Sbjct: 1429 NDDSKSPG 1436
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 43.5 bits (101), Expect = 3e-04
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 13 SKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDD 72
S K+KKK++ + E+ ++ + E +E E E E+++ E +EED S
Sbjct: 1418 SYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPG--- 1474
Query: 73 LNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVK 132
K +KK +KI +KD K+ ++ Q + E++ + ++++++ ++
Sbjct: 1475 -------KGRKKIRKI---------LKDDKLRTETQNALKEEEERRKRIAEREREREKLR 1518
Query: 133 FPDEDEILEKDEA 145
E++E ++A
Sbjct: 1519 -----EVIEIEDA 1526
Score = 42.0 bits (97), Expect = 8e-04
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 7 IFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED---TRK 63
+ D ++KK K K + + + ++ SE + + ++ E+++E TR
Sbjct: 1347 VSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRS 1406
Query: 64 KDASDDLDDLNFFNQKKKKKKTKKIFDID-------EAEEGVKDLKIESDVQEPTEPEDD 116
++ ++ + QKKK+++ K D E EE K+ + E + +E E ED+
Sbjct: 1407 AKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDE 1466
Query: 117 LDIMLGNKKKKKKNVKFPDEDEI-LEKDEALEDEDNKK 153
D K +KK K +D++ E AL++E+ ++
Sbjct: 1467 NDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERR 1504
Score = 34.3 bits (77), Expect = 0.16
Identities = 26/128 (20%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 32 QTEETQPSETKEVEPEPTEDKDLEADEE-DTRKKDASDDLDDLNFFNQKKKKKKTKKIFD 90
+ ++T+P E KEV+ E E+ D ++ S+++ + ++++ + ++ K +
Sbjct: 1354 EEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESE--DEQRPRTRSAKKAE 1411
Query: 91 IDEAEEGVKDLKIES--DVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALED 148
++E + K K VQE + E+ N +++++ + +E+E E++E ++
Sbjct: 1412 LEENQRSYKQKKKRRRIKVQEDSSSENK-----SNSEEEEEEKEEEEEEEEEEEEEEEDE 1466
Query: 149 EDNKKDDG 156
D+ K G
Sbjct: 1467 NDDSKSPG 1474
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 43.5 bits (101), Expect = 3e-04
Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 10 PTMSKKKKKKKKPFMLDEEGDTQT-EETQPSETKEVEPEPTEDKDLEADEE------DTR 62
P ++ + +K+P EE + EETQP +E++ + TE+K E E D +
Sbjct: 257 PEQARLEFLEKEPRKSSEEAGLEPPEETQPEVPEEMQRKATEEKGTELPERTKPDFPDHK 316
Query: 63 KKDASDD-----LDDLNFFNQKKKKKKTKKIFDIDEAE----EGVKDLKIESDVQEPTEP 113
+ ++D+ L+++ +++ +KT + ++++E E ++++ ++ + P P
Sbjct: 317 PRKSTDENVPEPLEEIKLEFPEEESRKTNEETILEQSEMMKPESPEEIRKSNEKKNPQPP 376
Query: 114 EDDLDIMLG--NKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSE 171
E+ ++ N + ++K P E +ILE L DE ++ + FS + P S+
Sbjct: 377 EETGPVLPQEINPQVEEKTQTKPTE-KILE----LPDETKPRETHVEFSKEDRPEPIKSK 431
Query: 172 RDYTYEELLNR 182
+EL +R
Sbjct: 432 YSVGNDELEHR 442
Score = 31.2 bits (69), Expect = 1.3
Identities = 36/201 (17%), Positives = 82/201 (40%), Gaps = 17/201 (8%)
Query: 17 KKKKKPFMLDEEGDTQTEET---QPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDL 73
+++ +P + +E Q EET P +TK+ P + LE + K + ++
Sbjct: 185 EEETEPGVPEESLRVQHEETGLEPPEQTKQDFPSEKLGESLEETDLQPPKMTKPETPEET 244
Query: 74 NFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKF 133
+ +KK+ + + ++ E+ + E+ ++ P E + ++ + K ++K +
Sbjct: 245 QRESTEKKRTEPPEQARLEFLEKEPRKSSEEAGLEPPEETQPEVPEEMQRKATEEKGTEL 304
Query: 134 PDEDEILEKDEALEDEDNKKDDGISFSNQTGP------AWAGSERDYTYEELLNRVFNIM 187
P+ K + + + K D N P + E T EE + +M
Sbjct: 305 PER----TKPDFPDHKPRKSTD----ENVPEPLEEIKLEFPEEESRKTNEETILEQSEMM 356
Query: 188 REKNPDMVAGEKRKFVMKPPQ 208
+ ++P+ + K +PP+
Sbjct: 357 KPESPEEIRKSNEKKNPQPPE 377
Score = 29.6 bits (65), Expect = 3.9
Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 43/166 (25%)
Query: 9 DPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDK------DLEADEEDTR 62
+P + +K + K +L+ +T+ ET +KE PEP + K +LE E
Sbjct: 388 NPQVEEKTQTKPTEKILELPDETKPRETHVEFSKEDRPEPIKSKYSVGNDELEHREPKRG 447
Query: 63 KKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGV-------------KDLKIESDVQE 109
K SD K +K+ + + E+EE + ++ E +
Sbjct: 448 KLSLSD-----------KFRKEYYALGSLRESEESIGTHYEFLQPLQKLLNVSEECSYSD 496
Query: 110 PTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDD 155
P+E + +L +F E E+++ + L++ ++ D+
Sbjct: 497 PSESQTELS-------------EFVHEKEVVDLSQELKERVSEDDE 529
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 43.1 bits (100), Expect = 3e-04
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
Query: 14 KKKKKKKKPFMLDEEGD---TQTEETQPSETKEVEP---------EPTEDKDLEADEEDT 61
+K+K+K+KPF D EG+ T++ ++ P E + E + + D E +ED
Sbjct: 668 EKRKEKEKPFYSDSEGESGPTESADSDPESESESDSKSSSESGSGESSSESDNEDQDEDE 727
Query: 62 RKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDD-LDIM 120
K S+ +K KKK ++ + ++EG S+ + +E E++ L+
Sbjct: 728 EKGRGSESEQSEEDGKRKTKKKVPERKGEASSSDEGSDSSSSSSESEMTSESEEEQLEPA 787
Query: 121 LGNKKKKKKNVKFPDEDEILEKDEALED 148
++K + P EI D LED
Sbjct: 788 SWSRKTPPSSKSAPATKEISLLD--LED 813
Score = 32.0 bits (71), Expect = 0.79
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 77 NQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDE 136
N++K+K+K K + E E G + +SD + +E + G+ + ++ D+
Sbjct: 666 NREKRKEKEKPFYSDSEGESGPTE-SADSDPESESESDSKSSSESGSGESSSESDN-EDQ 723
Query: 137 DEILEKDEALEDEDNKKD 154
DE EK E E +++D
Sbjct: 724 DEDEEKGRGSESEQSEED 741
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 43.1 bits (100), Expect = 3e-04
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 11/155 (7%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETK-----EVEPEPTEDKDLEADEEDTRKKDASD 68
KKKKK+ K +E E+ +P E K ++ EP E K A + K +S+
Sbjct: 641 KKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSN 700
Query: 69 DLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKK 128
D KKK K K E E DL P E ++D + ++
Sbjct: 701 KKPDSEASALKKKVNKGKT-----EGSEN-SDLDKTPPPSPPPEEDEDPGVQKRRSSRQV 754
Query: 129 KNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQT 163
K ++ ++ E DE +D D D S ++Q+
Sbjct: 755 KRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQS 789
Score = 28.5 bits (62), Expect = 8.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Query: 67 SDD-LDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKK 125
SDD L + Q+KKKKK ++ +G V + LD KK
Sbjct: 583 SDDYLPSIEQQPQQKKKKKKNNHIVAEDPSKGFGKDDFPGGVDNQELNRNSLDGSQEEKK 642
Query: 126 KKKKNVKFPDEDEILEKDEALEDEDNK 152
KKK++ D E E E E ++ K
Sbjct: 643 KKKRSKAKKDPKEPKEPKEKKEPKEPK 669
Score = 28.5 bits (62), Expect = 8.7
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDL 73
KKKKKK + ++ ++ P V+ + L+ +E+ +KK S D
Sbjct: 597 KKKKKKNNHIVAEDPSKGFGKDDFPGG---VDNQELNRNSLDGSQEEKKKKKRSKAKKDP 653
Query: 74 NFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKF 133
+ K+KK+ K+ K K +EP E + KK N K
Sbjct: 654 KEPKEPKEKKEPKE----------PKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKP 703
Query: 134 PDEDEILEK 142
E L+K
Sbjct: 704 DSEASALKK 712
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 42.4 bits (98), Expect = 6e-04
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 15/146 (10%)
Query: 9 DPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEEDTRKKDASD 68
D KK K K + EG+ E ++K+ + + + KD A E K D
Sbjct: 188 DNKKDKKDSNKGKDSATESEGEKGGTE---KDSKKGKKDSKKGKD-SAIELQAVKADEKK 243
Query: 69 DLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKK 128
D D N+ + K KK D E ++G KD K S ++ +DD+ KK+
Sbjct: 244 DEDGKKDANKGDESKDAKK--DAKEIKKGKKDKKKPSSTD--SDSKDDV-------KKES 292
Query: 129 KNVKFPDEDEILEKDEALEDEDNKKD 154
K D ++ +KD E D+KKD
Sbjct: 293 KKDATKDAKKVAKKDTEKESADSKKD 318
Score = 37.7 bits (86), Expect = 0.014
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Query: 27 EEGDTQTEETQP-SETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKT 85
E+ TQ + T SE K+ + + + KD+E +E+ K DA D KK +K
Sbjct: 119 EDKTTQKDTTDSESELKQGKKDSKKGKDIEKGKEE--KLDAKKDSK-----KGKKDAEKG 171
Query: 86 KKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEA 145
K E E+G + D ++ + +D G K +K+ K +D KD A
Sbjct: 172 KDSATESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTEKDSKKGKKDSKKGKDSA 231
Query: 146 LE----------DEDNKKD 154
+E DED KKD
Sbjct: 232 IELQAVKADEKKDEDGKKD 250
Score = 36.6 bits (83), Expect = 0.032
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 12 MSKKKKKKKKPFMLDEEG-DTQTEETQPSETKEVEPEPTEDKDLE-ADEEDTRKKDASDD 69
+ K KK KKKP D + D +E++ TK+ + +D + E AD + KK+A D
Sbjct: 267 IKKGKKDKKKPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKD 326
Query: 70 LDDLNFFNQKKKKKKTKK 87
N KK +KK K
Sbjct: 327 AKKDAKKNAKKDEKKDAK 344
Score = 35.4 bits (80), Expect = 0.072
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 37 QPSETKEVEPEPTEDKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEE 96
+P+ T EV+ + E + E+ T +KD +D +L K+ KK +KK DI++ +E
Sbjct: 100 KPTRTVEVDSKAAEIG--KKGEDKTTQKDTTDSESEL-----KQGKKDSKKGKDIEKGKE 152
Query: 97 GVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKD 154
D K +S KK KK K D E ++ +DNKKD
Sbjct: 153 EKLDAKKDS------------------KKGKKDAEKGKDSATESEDEKGGAKKDNKKD 192
Score = 29.6 bits (65), Expect = 3.9
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 14 KKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTE-DKDLEADEEDTRKKDASDDLDD 72
K + KK DE D + + + + K+ + +P+ D D + D + KKDA+ D
Sbjct: 243 KDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVKKESKKDATKDA-- 300
Query: 73 LNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNVK 132
+K KK T+K E+ + KD K + + + D KK +KK+ K
Sbjct: 301 -----KKVAKKDTEK-----ESADSKKDAK------KNAKKDAKKDAKKNAKKDEKKDAK 344
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 42.4 bits (98), Expect = 6e-04
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED 60
M D + T ++K + ++ EE +T T+ Q ++ ++ E EDK+ E +EE+
Sbjct: 131 MQNDTAENETTEKEEKSESRQERYEIEETETVTKSYQKNDWRDAEENKKEDKEKEEEEEE 190
Query: 61 TRKKDA-SDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDI 119
K+ + ++ + + K++K ++ + EE +KD KI+ D + E + +D
Sbjct: 191 KPKRGSIGENQGEEKGTKVQAKREKLQEDKPTFKKEE-IKDEKIKKDKEPKEEVKSFMDR 249
Query: 120 MLGNKKKKKKNVKF 133
G + K +N +F
Sbjct: 250 KKGFTEVKSQNGEF 263
Score = 28.5 bits (62), Expect = 8.7
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 15 KKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLE---ADEEDTRKKDASDDLD 71
KKK++++ +L+EE + +E + +E E + +++E A+ + R+K D L
Sbjct: 334 KKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLS 393
Query: 72 DLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIMLGNKKKKKKNV 131
D KK K F +G LKIE + L +K V
Sbjct: 394 D---------DKKPFKCF----TPKG-SSLKIEERAE-----------FLNKSVQKSSGV 428
Query: 132 KFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPA 166
K + I+ K ++ ++ +G + T PA
Sbjct: 429 KSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPA 463
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,720,534
Number of Sequences: 37866
Number of extensions: 701297
Number of successful extensions: 8012
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 499
Number of HSP's that attempted gapping in prelim test: 4397
Number of HSP's gapped (non-prelim): 2719
length of query: 333
length of database: 18,247,518
effective HSP length: 103
effective length of query: 230
effective length of database: 14,347,320
effective search space: 3299883600
effective search space used: 3299883600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.