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Search of human proteins with 29789407
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29789407 ring finger protein 149 [Homo sapiens]
(400 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29789407 ring finger protein 149 [Homo sapiens] 819 0.0
gi|58331204 ring finger protein 150 [Homo sapiens] 281 6e-76
gi|29788758 ring finger protein 130 [Homo sapiens] 262 5e-70
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 252 5e-67
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 239 4e-63
gi|37675277 ring finger protein 148 [Homo sapiens] 211 9e-55
gi|21040269 ring finger protein 133 [Homo sapiens] 189 4e-48
gi|34577087 ring finger protein 13 [Homo sapiens] 82 9e-16
gi|6005864 ring finger protein 13 [Homo sapiens] 82 9e-16
gi|14149702 ring finger protein 167 [Homo sapiens] 81 2e-15
gi|63025220 ring finger protein 215 [Homo sapiens] 74 2e-13
gi|150378447 zinc and ring finger 3 [Homo sapiens] 71 2e-12
gi|37595553 ring finger protein 111 [Homo sapiens] 69 1e-11
gi|150170725 zinc and ring finger 4 [Homo sapiens] 67 4e-11
gi|56711322 ring finger protein 43 [Homo sapiens] 64 2e-10
gi|38045931 ring finger protein 122 [Homo sapiens] 64 2e-10
gi|7662486 ring finger protein 44 [Homo sapiens] 63 4e-10
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 62 7e-10
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 62 7e-10
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 62 7e-10
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 62 1e-09
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 62 1e-09
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 62 1e-09
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 62 1e-09
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 62 1e-09
gi|33859668 Rabring 7 [Homo sapiens] 60 3e-09
gi|57165361 ring finger protein 165 [Homo sapiens] 60 5e-09
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 59 1e-08
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 59 1e-08
gi|7657520 ring finger protein 11 [Homo sapiens] 58 1e-08
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 819 bits (2116), Expect = 0.0
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MAWRRREASVGARGVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSE 60
MAWRRREASVGARGVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSE
Sbjct: 1 MAWRRREASVGARGVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSE 60
Query: 61 SGRFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTF 120
SGRFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTF
Sbjct: 61 SGRFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTF 120
Query: 121 KDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIP 180
KDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIP
Sbjct: 121 KDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIP 180
Query: 181 VTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHR 240
VTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHR
Sbjct: 181 VTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHR 240
Query: 241 KETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWL 300
KETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWL
Sbjct: 241 KETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWL 300
Query: 301 LDHRTCPMCKLDVIKALGYWGEPGDVQEMPAPESPPGRDPAANLSLALPDDDGSDESSPP 360
LDHRTCPMCKLDVIKALGYWGEPGDVQEMPAPESPPGRDPAANLSLALPDDDGSDESSPP
Sbjct: 301 LDHRTCPMCKLDVIKALGYWGEPGDVQEMPAPESPPGRDPAANLSLALPDDDGSDESSPP 360
Query: 361 SASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPIS 400
SASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPIS
Sbjct: 361 SASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPIS 400
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 281 bits (720), Expect = 6e-76
Identities = 150/347 (43%), Positives = 216/347 (62%), Gaps = 20/347 (5%)
Query: 25 LCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSV-----------SESGRFGDSSPKEGA 73
LC+ EW++A VNI Y +P + + +E GR+G+ SPK+ A
Sbjct: 27 LCLDFTVAEKEEWYTAFVNITYAEPAPDPGAGAAGGGGAELHTEKTECGRYGEHSPKQDA 86
Query: 74 HGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAARRNAS 133
G V V + D C P+T+F P G W+AL+ +G CT++DK+ A +NAS
Sbjct: 87 RGEV-VMASSAHDRLACDPNTKFAAPTRGKN----WIALIPKGNCTYRDKIRNAFLQNAS 141
Query: 134 AVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIGVGTRHVQ 193
AVV++N N T+ M HAG +IV IMI PKG+EI+ L+++ I VTM I +GTR++Q
Sbjct: 142 AVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQ 201
Query: 194 EFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKE-TKKVIGQLLL 252
+++S SVVFV+I+FI +MIISLAWL+FYYIQRF Y ++ +Q + KK I +L +
Sbjct: 202 KYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQI 261
Query: 253 HTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLD 312
T+K G+K + D +NCAVCIE +K D++RILPC+H+FH+ C+DPWLLDHRTCPMCK++
Sbjct: 262 RTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMN 321
Query: 313 VIKALGYWGEPGDVQEMPAP-ESPPGRDPAANLSLALPDDDGSDESS 358
++KALG + ++P E G P ++ A D +ESS
Sbjct: 322 ILKALGIPPNADCMDDLPTDFEGSLGGPPTNQITGA--SDTTVNESS 366
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 262 bits (669), Expect = 5e-70
Identities = 140/311 (45%), Positives = 196/311 (63%), Gaps = 8/311 (2%)
Query: 11 GARGVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPK 70
G + ALALL +L A + E+++A++N+ +P + + GR+G SPK
Sbjct: 8 GPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPGRGAPLTFRIDRGRYGLDSPK 67
Query: 71 EGAHGLVGVPWAPGG--DLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAA 128
G V P G D GC P TRFFVP W+AL+ RG CTFK+K+ AA
Sbjct: 68 AEVRGQVLAPLPLHGVADHLGCDPQTRFFVPP----NIKQWIALLQRGNCTFKEKISRAA 123
Query: 129 RRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIGVG 188
NA AVV+YN + + M+H GTG+I+ +MI+ +G++IL ++K I V MTI VG
Sbjct: 124 FHNAVAVVIYNNKSKEE-PVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVG 182
Query: 189 TRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKET-KKVI 247
TR + S S+VFV+I+FI +MIIS AWLIFY+IQ+ YT ++ +Q + KK I
Sbjct: 183 TRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAI 242
Query: 248 GQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCP 307
+L TVK G+K D D ++CAVCIE++K D++RILPCKH+FH+ C+DPWL +H TCP
Sbjct: 243 SKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCP 302
Query: 308 MCKLDVIKALG 318
MCKL+++KALG
Sbjct: 303 MCKLNILKALG 313
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 252 bits (643), Expect = 5e-67
Identities = 145/349 (41%), Positives = 205/349 (58%), Gaps = 11/349 (3%)
Query: 20 LLALALCVPGARGRALEWFSAVVNIEYVDPQT--NLTVWSVSESGRFGDSSPKEGAHGLV 77
LLAL+ PG+RG W +A +N+ + P T N TVW +SE G +G SP E G++
Sbjct: 26 LLALSPQAPGSRGAEAVW-TAYLNVSWRVPHTGVNRTVWELSEEGVYGQDSPLEPVAGVL 84
Query: 78 GVPWAPGGDLEGCAPDTRFFVPEPGGRGA-APWVALVARGG-CTFKDKVLVAARRNASAV 135
P PG L C P T F VP G W+AL+ RGG CTF DK+ +A R AS
Sbjct: 85 VPPDGPGA-LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGA 143
Query: 136 VLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIGVGTRHVQEF 195
V++N N +PMSH G +IV IMI KG +IL+ +Q+GI VTM I VG +H +
Sbjct: 144 VIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKH-GPW 202
Query: 196 ISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRK-ETKKVIGQLLLHT 254
++ S+ FV+++F + ++ + IFY +R +Q Q K + KK IG+L L T
Sbjct: 203 VNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRT 262
Query: 255 VKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVI 314
+K G+K I D ++CAVCIE +K D++RIL C HIFH+ C+DPWLL+HRTCPMCK D++
Sbjct: 263 LKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDIL 322
Query: 315 KALGYWGEPGDVQEMPAPESPPGRDPAANLSLALPDDDGSDESSPPSAS 363
KALG DV++ P + +N + + +D+ S+ +S AS
Sbjct: 323 KALGI---EVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGYAS 368
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 239 bits (609), Expect = 4e-63
Identities = 130/326 (39%), Positives = 191/326 (58%), Gaps = 13/326 (3%)
Query: 39 SAVVNIEYVDPQTNLTVWSVSESGRFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFV 98
SA V + Y + +N T E G +G +SP A G+VG+P + + C +T F
Sbjct: 29 SAYVTVTYYNETSNYTAIETCECGVYGLASPVANAMGVVGIP--KNNNYQACDHNTEF-- 84
Query: 99 PEPGGRGAAPWVALVARGGCTFKDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNI 158
PW+AL+ RG CTF +K+ A RRNA AVV+YN GN T+ M++ G +I
Sbjct: 85 ----SNTKKPWIALIERGNCTFSEKIQTAGRRNADAVVIYNAPETGNQTIQMANFGAVDI 140
Query: 159 VVIMISYPKGREILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAW 218
V IMI KG +IL+ +Q+GI VTM I VG +H +++ S+ FV+++F + ++ +
Sbjct: 141 VAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKH-GPWVNHYSIFFVSVSFFIITAATVGY 199
Query: 219 LIFYYIQRFLYTGSQIGSQSHRK-ETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFK 277
IFY +R +Q Q K + KK IG+L L T+K G+K I D ++CAVCIE +K
Sbjct: 200 FIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYK 259
Query: 278 VKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPGDVQEMPAPESPPG 337
D++RIL C HIFH+ C+DPWLL+HRTCPMCK D++KALG DV++ P
Sbjct: 260 PNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGI---EVDVEDGSVSLQVPV 316
Query: 338 RDPAANLSLALPDDDGSDESSPPSAS 363
+ +N + + +D+ S+ +S AS
Sbjct: 317 SNEISNSASSHEEDNRSETASSGYAS 342
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 211 bits (537), Expect = 9e-55
Identities = 123/304 (40%), Positives = 175/304 (57%), Gaps = 18/304 (5%)
Query: 14 GVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPKEGA 73
G+L L++ L L P + G+A+ ++A +NI + N + ESG FG+ SP E
Sbjct: 17 GLLRLSIFLL-LSFPDSNGKAI--WTAHLNITF--QVGNEITSELGESGVFGNHSPLERV 71
Query: 74 HGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAARRNAS 133
G+V +P G + C P T F P+ A W+AL+ RGGCTF K+ VAA + A+
Sbjct: 72 SGVVALP--EGWNQNACHPLTNFSRPKQ----ADSWLALIERGGCTFTHKINVAAEKGAN 125
Query: 134 AVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIGVGTRHVQ 193
V++YN + G+ PMSH GT NIV +MIS KG EIL +QKG+ VT+ I VG H+Q
Sbjct: 126 GVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVGRMHMQ 185
Query: 194 EFISGQSVVFVAIAF-ITMMIISLAWLIFYYIQR-FLYTGSQIGSQSHRKETKKVIGQLL 251
+F +A I + W + + F SQI + + KK I QL
Sbjct: 186 WVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQI-----KTDVKKAIDQLQ 240
Query: 252 LHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKL 311
L +K G++ +D++ +NC VC + +K +D++RIL CKH FH+ CIDPWLL HRTCPMCK
Sbjct: 241 LRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKC 300
Query: 312 DVIK 315
D++K
Sbjct: 301 DILK 304
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 189 bits (480), Expect = 4e-48
Identities = 113/318 (35%), Positives = 169/318 (53%), Gaps = 23/318 (7%)
Query: 3 WRRREASVGARGVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSESG 62
WR AS L L++ C RA + A +NI + N + + E+G
Sbjct: 9 WRNNTASSWLMKFSVLWLVSQNCC------RASVVWMAYMNISF--HVGNHVLSELGETG 60
Query: 63 RFGDSSPKEGAHGLVGVPWAPGGDLEG-CAPDTRFFVPEPGGRGAAPWVALVARGGCTFK 121
FG SS + G++ VP P G ++ C P+T F + + W+AL+ RGGCTF
Sbjct: 61 VFGRSSTLKRVAGVI-VP--PEGKIQNACNPNTIF----SRSKYSETWLALIERGGCTFT 113
Query: 122 DKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPV 181
K+ VA + AS V++YN GN PM H ++VV+MI KG EI L++KG+ +
Sbjct: 114 QKIKVATEKGASGVIIYNVPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEIFHLIKKGVLI 173
Query: 182 TMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGS-QSHR 240
T + VG +H+ + ++F+ + +LA+ IFY+I R Q Q
Sbjct: 174 TAVVEVGRKHIIW------MNHYLVSFVIVTTATLAYFIFYHIHRLCLARIQNRRWQRLT 227
Query: 241 KETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWL 300
+ + GQL L VK G++ I+ + ++C +C E +K DI+RIL CKH FH+ CIDPW+
Sbjct: 228 TDLQNTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWI 287
Query: 301 LDHRTCPMCKLDVIKALG 318
L H TCP+CK D++K LG
Sbjct: 288 LPHGTCPICKCDILKVLG 305
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 82.0 bits (201), Expect = 9e-16
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 53/301 (17%)
Query: 63 RFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKD 122
RFG P EG G + + P E P P + ++ L+ R C F
Sbjct: 54 RFGYRLPAEGLKGFL-INSKPENACEPIVP------PPVKDNSSGTFIVLIRRLDCNFDI 106
Query: 123 KVLVAARRNASAVVLYNE-------------ERYGNITLPMSHAG--TGNIVVIMISYPK 167
KVL A R A +++N E I +P G + N + +Y K
Sbjct: 107 KVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEK 166
Query: 168 GREILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRF 227
G ++ + + +P+ + I F+ ++ I L ++ + I +F
Sbjct: 167 GGHLILVPEFSLPLE--------------------YYLIPFLIIVGICLILIVIFMITKF 206
Query: 228 LYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPC 287
+ + RK+ K +L +H K G++ DV CA+C++ ++ D +RILPC
Sbjct: 207 VQDRHRARRNRLRKDQLK---KLPVHKFKKGDE-YDV----CAICLDEYEDGDKLRILPC 258
Query: 288 KHIFHRICIDPWLL-DHRTCPMCKLDVIKALGYWGEPGD--VQEMPAPESPPGRDPAANL 344
H +H C+DPWL +TCP+CK V+ + G D +E E P P A++
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASV 318
Query: 345 S 345
S
Sbjct: 319 S 319
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 82.0 bits (201), Expect = 9e-16
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 53/301 (17%)
Query: 63 RFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKD 122
RFG P EG G + + P E P P + ++ L+ R C F
Sbjct: 54 RFGYRLPAEGLKGFL-INSKPENACEPIVP------PPVKDNSSGTFIVLIRRLDCNFDI 106
Query: 123 KVLVAARRNASAVVLYNE-------------ERYGNITLPMSHAG--TGNIVVIMISYPK 167
KVL A R A +++N E I +P G + N + +Y K
Sbjct: 107 KVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEK 166
Query: 168 GREILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRF 227
G ++ + + +P+ + I F+ ++ I L ++ + I +F
Sbjct: 167 GGHLILVPEFSLPLE--------------------YYLIPFLIIVGICLILIVIFMITKF 206
Query: 228 LYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPC 287
+ + RK+ K +L +H K G++ DV CA+C++ ++ D +RILPC
Sbjct: 207 VQDRHRARRNRLRKDQLK---KLPVHKFKKGDE-YDV----CAICLDEYEDGDKLRILPC 258
Query: 288 KHIFHRICIDPWLL-DHRTCPMCKLDVIKALGYWGEPGD--VQEMPAPESPPGRDPAANL 344
H +H C+DPWL +TCP+CK V+ + G D +E E P P A++
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASV 318
Query: 345 S 345
S
Sbjct: 319 S 319
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 80.9 bits (198), Expect = 2e-15
Identities = 85/338 (25%), Positives = 139/338 (41%), Gaps = 71/338 (21%)
Query: 64 FGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDK 123
FG + +EG G + V P AP P P + ++AL+ R C F K
Sbjct: 45 FGATLSQEGLQGFL-VEAHPDNACSPIAP------PPPAPVNGSVFIALLRRFDCNFDLK 97
Query: 124 VLVAARRNASAVVLYN-------------EERYGNITLPMSHAG--TGNIVVIMISYPKG 168
VL A + A V++N EE I +P G + + + Y KG
Sbjct: 98 VLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKG 157
Query: 169 REILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFL 228
+L + P+ + + F I + ++++++ ++ I R +
Sbjct: 158 ARVLLVPDNTFPLGYYL---------------IPFTGI--VGLLVLAMGAVM---IARCI 197
Query: 229 YTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCK 288
++ + TK+ + Q+ H + G++ DV CA+C++ ++ D +R+LPC
Sbjct: 198 QHRKRL---QRNRLTKEQLKQIPTHDYQKGDQ-YDV----CAICLDEYEDGDKLRVLPCA 249
Query: 289 HIFHRICIDPWLLDHR-TCPMCKLDVIKALG-----------YWGEPGDVQEMPAPESPP 336
H +H C+DPWL R TCP+CK V + G G+ G+ ++ PA E
Sbjct: 250 HAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPASE--- 306
Query: 337 GRDPAANLSLALPDDDGSDESSP-----PSASPAESEP 369
R P S LP GS +P PS P S P
Sbjct: 307 -RTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPP 343
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 74.3 bits (181), Expect = 2e-13
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 263 DVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVI 314
D AE CAVC++ F K +R+LPCKH FHR C+DPWL+ +TCP+CK +V+
Sbjct: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 70.9 bits (172), Expect = 2e-12
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 268 NCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWG------ 321
+CA+C+E + + +R++PC H FHR C+DPWLL H TCP C+ ++I+ G
Sbjct: 192 DCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVET 251
Query: 322 ---EPGDVQEMPAPESPPGRDPAANLSLALPDDDGSDESSPP 360
G Q + P PGR N A P D P
Sbjct: 252 SNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNP 293
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 68.6 bits (166), Expect = 1e-11
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 252 LHTVKHGEKGIDVDAEN-CAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCK 310
LH + GE+G + D E C +C+ + + +R LPC H+FH++C+D WL+ ++ CP+C+
Sbjct: 916 LHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 975
Query: 311 LDV 313
+D+
Sbjct: 976 VDI 978
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 66.6 bits (161), Expect = 4e-11
Identities = 78/309 (25%), Positives = 118/309 (38%), Gaps = 57/309 (18%)
Query: 32 GRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPKEGAHGLVGVPWAPGG------ 85
GRAL A++ + + V +V E S L GVP AP G
Sbjct: 77 GRALVAVKALLVLSLLQVPAQAVVRAVLEDN--SSSVDFADLPALFGVPLAPEGIRGYLM 134
Query: 86 ---DLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAARRNASAVVLYN--- 139
C P P G R + L+ R CTF KVL A R A +++N
Sbjct: 135 EVKPANACHP---IEAPRLGNRSLGA-IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHS 190
Query: 140 ----------EERYGNITLP---MSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIG 186
E+ G I +P +S A + ++ VI+ +L P +G
Sbjct: 191 DDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALL---LPDDPPCHDLG 247
Query: 187 VGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKETKKV 246
++ G ++ V AF +++ WL + Q SHR+ K
Sbjct: 248 CHPVLTVSWVLGCTLALVVSAFF---VLNHLWL---WAQACC---------SHRRPVKTS 292
Query: 247 IGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWL--LDHR 304
Q K + + CA+C++ ++ D ++ILPC H +H CIDPW R
Sbjct: 293 TCQ------KAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRR 346
Query: 305 TCPMCKLDV 313
+CP+CK V
Sbjct: 347 SCPVCKQSV 355
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 64.3 bits (155), Expect = 2e-10
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 269 CAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDV 313
CA+C+E F +R++ C H FHR C+DPWL HRTCP+C ++
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNI 316
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 63.9 bits (154), Expect = 2e-10
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 206 IAFITMMIISLAWLIF--YYIQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGID 263
+ F T + + + LIF Y+I + + +QS R K+V+ +K K +
Sbjct: 40 VIFGTGIFVFMLSLIFCCYFISKL-----RNQAQSERYGYKEVV-------LKGDAKKLQ 87
Query: 264 VDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMC 309
+ + CAVC+E+FK KD + +LPC+H FHR C+ WL CPMC
Sbjct: 88 LYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 63.2 bits (152), Expect = 4e-10
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 225 QRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRI 284
+ L ++G R TK I QL + + + C VC +F+ + ++R+
Sbjct: 338 EALLNLAERLGDAKPRGLTKADIEQL--PSYRFNPDSHQSEQTLCVVCFSDFEARQLLRV 395
Query: 285 LPCKHIFHRICIDPWLLDHRTCPMCKLD 312
LPC H FH C+D WL +RTCP+C+ D
Sbjct: 396 LPCNHEFHTKCVDKWLKANRTCPICRAD 423
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 62.4 bits (150), Expect = 7e-10
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 267 ENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIK 315
E CAVC+E+FK +D + I PCKH FHR C+ WL + CP+C + V++
Sbjct: 97 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 145
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 62.4 bits (150), Expect = 7e-10
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 267 ENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIK 315
E CAVC+E+FK +D + I PCKH FHR C+ WL + CP+C + V++
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 124
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 62.4 bits (150), Expect = 7e-10
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 267 ENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIK 315
E CAVC+E+FK +D + I PCKH FHR C+ WL + CP+C + V++
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 124
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 225 QRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRI 284
+ L ++G R TK I QL + + + C VC+ +F+ + ++R+
Sbjct: 338 EALLNLAERLGEAKPRGLTKADIEQL--PSYRFNPNNHQSEQTLCVVCMCDFESRQLLRV 395
Query: 285 LPCKHIFHRICIDPWLLDHRTCPMCKLD 312
LPC H FH C+D WL +RTCP+C+ D
Sbjct: 396 LPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 225 QRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRI 284
+ L ++G R TK I QL + + + C VC+ +F+ + ++R+
Sbjct: 338 EALLNLAERLGEAKPRGLTKADIEQL--PSYRFNPNNHQSEQTLCVVCMCDFESRQLLRV 395
Query: 285 LPCKHIFHRICIDPWLLDHRTCPMCKLD 312
LPC H FH C+D WL +RTCP+C+ D
Sbjct: 396 LPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 225 QRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRI 284
+ L ++G R TK I QL + + + C VC+ +F+ + ++R+
Sbjct: 371 EALLNLAERLGEAKPRGLTKADIEQL--PSYRFNPNNHQSEQTLCVVCMCDFESRQLLRV 428
Query: 285 LPCKHIFHRICIDPWLLDHRTCPMCKLD 312
LPC H FH C+D WL +RTCP+C+ D
Sbjct: 429 LPCNHEFHAKCVDKWLKANRTCPICRAD 456
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 225 QRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRI 284
+ L ++G R TK I QL + + + C VC+ +F+ + ++R+
Sbjct: 338 EALLNLAERLGEAKPRGLTKADIEQL--PSYRFNPNNHQSEQTLCVVCMCDFESRQLLRV 395
Query: 285 LPCKHIFHRICIDPWLLDHRTCPMCKLD 312
LPC H FH C+D WL +RTCP+C+ D
Sbjct: 396 LPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 225 QRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRI 284
+ L ++G R TK I QL + + + C VC+ +F+ + ++R+
Sbjct: 421 EALLNLAERLGEAKPRGLTKADIEQL--PSYRFNPNNHQSEQTLCVVCMCDFESRQLLRV 478
Query: 285 LPCKHIFHRICIDPWLLDHRTCPMCKLD 312
LPC H FH C+D WL +RTCP+C+ D
Sbjct: 479 LPCNHEFHAKCVDKWLKANRTCPICRAD 506
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 60.5 bits (145), Expect = 3e-09
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 252 LHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCK 310
L TV ++ +D+ E C VC E++ V++ +R LPC H FH CI PWL H TCP+C+
Sbjct: 212 LPTVTVTQEQVDMGLE-CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 59.7 bits (143), Expect = 5e-09
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 267 ENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALG 318
E C +C+ + + +R LPC H+FH++C+D WL + CP+C++D+ LG
Sbjct: 292 EKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLG 343
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 58.5 bits (140), Expect = 1e-08
Identities = 27/60 (45%), Positives = 32/60 (53%)
Query: 258 GEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKAL 317
G + + C +C+ F D IR LPCKH FH CID WLL TCP C+ V AL
Sbjct: 77 GRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCRGPVDAAL 136
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 58.5 bits (140), Expect = 1e-08
Identities = 27/60 (45%), Positives = 32/60 (53%)
Query: 258 GEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKAL 317
G + + C +C+ F D IR LPCKH FH CID WLL TCP C+ V AL
Sbjct: 77 GRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCRGPVDAAL 136
>gi|7657520 ring finger protein 11 [Homo sapiens]
Length = 154
Score = 58.2 bits (139), Expect = 1e-08
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 258 GEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKAL 317
G G + C +C+ +F D IR LPC HI+H CID WL+ TCP C V AL
Sbjct: 88 GRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSCMEPVDAAL 147
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,345,976
Number of Sequences: 37866
Number of extensions: 917033
Number of successful extensions: 4571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 4221
Number of HSP's gapped (non-prelim): 466
length of query: 400
length of database: 18,247,518
effective HSP length: 104
effective length of query: 296
effective length of database: 14,309,454
effective search space: 4235598384
effective search space used: 4235598384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.