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Search of human proteins with 29788768
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29788768 tubulin, beta 2B [Homo sapiens]
(445 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29788768 tubulin, beta 2B [Homo sapiens] 911 0.0
gi|4507729 tubulin, beta 2 [Homo sapiens] 905 0.0
gi|5174735 tubulin, beta, 2 [Homo sapiens] 890 0.0
gi|29788785 tubulin, beta [Homo sapiens] 876 0.0
gi|21361322 tubulin, beta 4 [Homo sapiens] 875 0.0
gi|50592996 tubulin, beta, 4 [Homo sapiens] 850 0.0
gi|14210536 tubulin, beta 6 [Homo sapiens] 833 0.0
gi|42558279 tubulin, beta 8 [Homo sapiens] 823 0.0
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 759 0.0
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 732 0.0
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 408 e-114
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 408 e-114
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens] 376 e-104
gi|14389309 tubulin alpha 6 [Homo sapiens] 376 e-104
gi|17986283 tubulin, alpha 1a [Homo sapiens] 374 e-103
gi|17921989 tubulin, alpha 4a [Homo sapiens] 371 e-103
gi|156564363 tubulin, alpha 3d [Homo sapiens] 370 e-102
gi|17921993 tubulin, alpha 3c [Homo sapiens] 370 e-102
gi|9507215 tubulin, alpha 8 [Homo sapiens] 367 e-101
gi|46409270 tubulin, alpha 3e [Homo sapiens] 362 e-100
gi|13376181 tubulin, alpha-like 3 [Homo sapiens] 345 6e-95
gi|31543831 tubulin, gamma 1 [Homo sapiens] 291 6e-79
gi|7706751 tubulin, gamma 2 [Homo sapiens] 289 3e-78
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 259 3e-69
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens] 189 6e-48
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens] 189 6e-48
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens] 189 6e-48
gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens] 162 7e-40
gi|50592998 delta-tubulin [Homo sapiens] 144 2e-34
gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens] 99 1e-20
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 911 bits (2354), Expect = 0.0
Identities = 445/445 (100%), Positives = 445/445 (100%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGEFEEEEGEDEA 445
EYQQYQDATADEQGEFEEEEGEDEA
Sbjct: 421 EYQQYQDATADEQGEFEEEEGEDEA 445
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 905 bits (2339), Expect = 0.0
Identities = 443/445 (99%), Positives = 443/445 (99%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEA GNKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGEFEEEEGEDEA 445
EYQQYQDATADEQGEFEEEEGEDEA
Sbjct: 421 EYQQYQDATADEQGEFEEEEGEDEA 445
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 890 bits (2299), Expect = 0.0
Identities = 431/445 (96%), Positives = 441/445 (99%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE+ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGEFEEEEGEDEA 445
EYQQYQDATA+E+GEFEEE E+ A
Sbjct: 421 EYQQYQDATAEEEGEFEEEAEEEVA 445
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 876 bits (2263), Expect = 0.0
Identities = 424/443 (95%), Positives = 437/443 (98%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEATG KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE+ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGEFEEEEGED 443
EYQQYQDATA+E+ +F EE E+
Sbjct: 421 EYQQYQDATAEEEEDFGEEAEEE 443
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 875 bits (2260), Expect = 0.0
Identities = 425/445 (95%), Positives = 439/445 (98%), Gaps = 1/445 (0%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG YV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE+ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLTVAA+FRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGEFEEEEGEDEA 445
EYQQYQDATA E+GEFEEE E+ A
Sbjct: 421 EYQQYQDATA-EEGEFEEEAEEEVA 444
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 850 bits (2196), Expect = 0.0
Identities = 411/446 (92%), Positives = 433/446 (97%), Gaps = 1/446 (0%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDP+G+Y GDSDLQLERI+VYYNEA+ +KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRAILVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE E+CDCLQGFQLTHSLGGGTGSGMGTLLISK+REEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLTVA +FRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMS+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGE-FEEEEGEDEA 445
EYQQYQDATA+E+GE +E++E E EA
Sbjct: 421 EYQQYQDATAEEEGEMYEDDEEESEA 446
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 833 bits (2153), Expect = 0.0
Identities = 405/443 (91%), Positives = 424/443 (95%), Gaps = 1/443 (0%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++ KYV
Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE E CDCLQGFQLTHSLGGGTGSGMGTLLISKIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD++NMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLTVA +FRG MSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKM++TFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGE-FEEEEGE 442
EYQQYQDATA++ E FE+EE E
Sbjct: 421 EYQQYQDATANDGEEAFEDEEEE 443
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 823 bits (2127), Expect = 0.0
Identities = 394/444 (88%), Positives = 422/444 (95%), Gaps = 2/444 (0%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIV Q GQCGNQIGAKFWEVISDEH ID G+YHGDS LQLERINVYYNEA+G +YV
Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ GAGNNWAKGHYTEGAEL++SV+DVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE+ESCDCLQGFQLTHSLGGGTGSGMGTLL+SKIREEYPDRI+NTFS++PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQL+EN DET+CIDNEALYDIC +TLKL TPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTV ELTQQMFD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACDPRHGRYLT AAIFRGRM M+EVDEQM N+Q+KNSSYF +W+PNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMSATFIGN+TAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQDATADEQGEFEEEEGEDE 444
EYQQYQDATA+E E +EE E+E
Sbjct: 421 EYQQYQDATAEE--EEDEEYAEEE 442
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 759 bits (1961), Expect = 0.0
Identities = 368/434 (84%), Positives = 397/434 (91%), Gaps = 1/434 (0%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MRE+V Q GQCGNQIGAKFWEVISDEH ID G+YHGDS LQLERINV+++EA+G +YV
Sbjct: 1 MRELVLTQTGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVHHHEASGGRYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
RA+LVDLEPGTMDSVRSGPFGQ+FRPDNF+ Q GAGNNWAKG YTEGAEL +SV+DVV
Sbjct: 61 SRAVLVDLEPGTMDSVRSGPFGQVFRPDNFISRQCGAGNNWAKGRYTEGAELTESVMDVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE+ESCDCLQGFQLTHSLGGGTGSGMGTLLISKI EEYPDRI+NT S++ PKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSILLLPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQL+EN DET+CIDNEALYDIC RTLKL TPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
FP QLNADLRKLA+NMVPFPRLHFFMPGFAPLTSRGSQQYRALTV ELTQQMFD+KNMM
Sbjct: 241 CFPDQLNADLRKLAMNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AA DPRHGRYLT AAIF+GRM M+EVDEQM N+Q+KNSSYF +W PNNVKTAVCDIPP G
Sbjct: 301 AARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFADWFPNNVKTAVCDIPPWG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMS TF GN+TA+QEL KR+SEQFTA FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSVTFTGNNTAVQEL-KRVSEQFTATFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 419
Query: 421 EYQQYQDATADEQG 434
EYQQYQDATA+ G
Sbjct: 420 EYQQYQDATAEGGG 433
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 732 bits (1889), Expect = 0.0
Identities = 354/445 (79%), Positives = 396/445 (88%), Gaps = 1/445 (0%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVHIQ GQCGNQIGAKFWE+I +EHGID GS G S LQLERI+VYYNEA G KYV
Sbjct: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDS+RS G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
R ESESCDCLQGFQ+ HSLGGGTGSGMGTLL++KIREEYPDRIMN+FSVMPSPKVSDTVV
Sbjct: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNA LS+HQL+EN D +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFD++N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
AACD R GRYLTVA IFRG+MS KEVD+Q+L+VQ +NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
Query: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
L M+ATFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
Query: 421 EYQQYQDATAD-EQGEFEEEEGEDE 444
EYQQ+QDA A E+ E EE E E
Sbjct: 421 EYQQFQDAKAVLEEDEEVTEEAEME 445
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 408 bits (1048), Expect = e-114
Identities = 239/425 (56%), Positives = 271/425 (63%), Gaps = 73/425 (17%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
M EIVHIQ G CG+QI AKFWEVISD H +D +E TG+KYV
Sbjct: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
P ILVD EPG MDS
Sbjct: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
KE+ESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SVMPS KV TV
Sbjct: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ+FD+KNMM
Sbjct: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKTAVCDIPPR 359
AA P + + MKEV+EQML+VQNK+ SSYF+EW+ VKTA+ DI P
Sbjct: 237 AA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
Query: 360 GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
G KM+ TF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
Query: 420 SEYQQ 424
SE++Q
Sbjct: 349 SEHRQ 353
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 408 bits (1048), Expect = e-114
Identities = 239/425 (56%), Positives = 271/425 (63%), Gaps = 73/425 (17%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
M EIVHIQ G CG+QI AKFWEVISD H +D +E TG+KYV
Sbjct: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
P ILVD EPG MDS
Sbjct: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
Query: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
KE+ESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SVMPS KV TV
Sbjct: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ+FD+KNMM
Sbjct: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
Query: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKTAVCDIPPR 359
AA P + + MKEV+EQML+VQNK+ SSYF+EW+ VKTA+ DI P
Sbjct: 237 AA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
Query: 360 GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
G KM+ TF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
Query: 420 SEYQQ 424
SE++Q
Sbjct: 349 SEHRQ 353
>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
Length = 451
Score = 376 bits (966), Expect = e-104
Identities = 182/450 (40%), Positives = 272/450 (60%), Gaps = 10/450 (2%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178
+RK ++ C LQGF + HS GGGTGSG +LL+ ++ +Y + FS+ P+P+VS
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+S +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
M CDPRHG+Y+ ++RG + K+V+ + ++ K S FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQYQDATADEQGEFEEEE 440
A +M L +Y++ + + +GE E EE
Sbjct: 421 AREDMAALEKDYEEVGVDSVEGEGEEEGEE 450
>gi|14389309 tubulin alpha 6 [Homo sapiens]
Length = 449
Score = 376 bits (965), Expect = e-104
Identities = 181/448 (40%), Positives = 271/448 (60%), Gaps = 10/448 (2%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178
+RK ++ C LQGF + HS GGGTGSG +LL+ ++ +Y + FS+ P+P+VS
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+S +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298
LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300
Query: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + + N+TA+ E + R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQYQDATADEQGEFEE 438
A +M L +Y++ +AD + E EE
Sbjct: 421 AREDMAALEKDYEEVGADSADGEDEGEE 448
>gi|17986283 tubulin, alpha 1a [Homo sapiens]
Length = 451
Score = 374 bits (959), Expect = e-103
Identities = 180/450 (40%), Positives = 271/450 (60%), Gaps = 10/450 (2%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178
+RK ++ C LQGF + HS GGGTGSG +LL+ ++ +Y + FS+ P+P+VS
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQYQDATADEQGEFEEEE 440
A +M L +Y++ + + +GE E EE
Sbjct: 421 AREDMAALEKDYEEVGVDSVEGEGEEEGEE 450
>gi|17921989 tubulin, alpha 4a [Homo sapiens]
Length = 448
Score = 371 bits (953), Expect = e-103
Identities = 178/448 (39%), Positives = 270/448 (60%), Gaps = 10/448 (2%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + + GQ G Q+G WE+ EHGI P G D + + ++ E K
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D +R+GP+ Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
Query: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178
+RK S+ C LQGF + HS GGGTGSG +LL+ ++ +Y + FS+ P+P+VS
Sbjct: 121 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+S +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
M CDPRHG+Y+ ++RG + K+V+ + ++ K S FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQYQDATADEQGEFEE 438
A +M L +Y++ + +++ E EE
Sbjct: 421 AREDMAALEKDYEEVGIDSYEDEDEGEE 448
>gi|156564363 tubulin, alpha 3d [Homo sapiens]
Length = 450
Score = 370 bits (950), Expect = e-102
Identities = 180/453 (39%), Positives = 271/453 (59%), Gaps = 14/453 (3%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178
+RK ++ C LQGF + HS GGGTGSG +LL+ ++ +Y + F++ P+P+VS
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQYQDATADEQGEFEEEEGED 443
A ++ L +Y++ + E E EEGE+
Sbjct: 421 AREDLAALEKDYEE----VGVDSVEAEAEEGEE 449
>gi|17921993 tubulin, alpha 3c [Homo sapiens]
Length = 450
Score = 370 bits (950), Expect = e-102
Identities = 180/453 (39%), Positives = 271/453 (59%), Gaps = 14/453 (3%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178
+RK ++ C LQGF + HS GGGTGSG +LL+ ++ +Y + F++ P+P+VS
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQYQDATADEQGEFEEEEGED 443
A ++ L +Y++ + E E EEGE+
Sbjct: 421 AREDLAALEKDYEE----VGVDSVEAEAEEGEE 449
>gi|9507215 tubulin, alpha 8 [Homo sapiens]
Length = 449
Score = 367 bits (942), Expect = e-101
Identities = 176/452 (38%), Positives = 274/452 (60%), Gaps = 18/452 (3%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERIN------VYYNEA 54
MRE + + GQ G QIG WE+ EHGI G++ D Q +IN +++E
Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTF----DAQASKINDDDSFTTFFSET 56
Query: 55 TGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
K+VPRA+++DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D
Sbjct: 57 GNGKHVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESID 116
Query: 115 SVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPK 174
VLD +RK +++C LQGF + HS GGGTGSG +LL+ ++ +Y + F++ P+P+
Sbjct: 117 LVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQ 176
Query: 175 VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMS 234
VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+S +S
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVS 236
Query: 235 GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMF 294
+T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCF 296
Query: 295 DSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
+ + M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 297 EPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGIN 356
Query: 355 DIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEM 406
PP ++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG 416
Query: 407 EFTEAESNMNDLVSEYQQYQDATADEQGEFEE 438
EF+EA ++ L +Y++ + +E+ E EE
Sbjct: 417 EFSEAREDLAALEKDYEEVGTDSFEEENEGEE 448
>gi|46409270 tubulin, alpha 3e [Homo sapiens]
Length = 450
Score = 362 bits (930), Expect = e-100
Identities = 178/453 (39%), Positives = 269/453 (59%), Gaps = 14/453 (3%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A +N+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLD 120
Query: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178
+RK ++ C LQGF + HS GGGTGSG +LL+ ++ +Y + F++ P+P+VS
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + + N+TAI E + R+ +F M+ + AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQYQDATADEQGEFEEEEGED 443
A ++ L + ++ + E E EEGE+
Sbjct: 421 AREDLAALEKDCEE----VGVDSVEAEAEEGEE 449
>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
Length = 446
Score = 345 bits (884), Expect = 6e-95
Identities = 172/441 (39%), Positives = 255/441 (57%), Gaps = 17/441 (3%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLER---------INVYY 51
MRE + I GQ G QIG WE+ EHGI P G QLE + ++
Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
Query: 52 NEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
E K+VPRA+ VDLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E
Sbjct: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
Query: 112 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP 171
++D VL+ RK +E C LQGF + S GGGTGSG +LL+ ++ EY + FSV P
Sbjct: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
Query: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
Query: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
+S +T LRF G LN DL + N+VP+PR+HF M FAP+ S + +V ++T
Sbjct: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
Query: 292 QMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
F+S N + CDPR G+Y+ ++RG + KEV+ + ++++S FV+W P K
Sbjct: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
Query: 352 AVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 403
+ + PP + S + N+TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
Query: 404 DEMEFTEAESNMNDLVSEYQQ 424
+E EF EA ++ L +Y++
Sbjct: 421 EEAEFLEAREDLAALERDYEE 441
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 291 bits (746), Expect = 6e-79
Identities = 148/438 (33%), Positives = 256/438 (58%), Gaps = 11/438 (2%)
Query: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVP 61
REI+ +Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+P
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
Query: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
RA+L+DLEP + S+ + P+ +++ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
Query: 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSP-KVSDT 178
+ +E++ D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T+SV P+ ++SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDV 181
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDSK 297
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
Query: 298 NMMAACD---PRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV- 353
N+M + + Y+ + I +G + +V + + ++ + + F+ W P +++ A+
Sbjct: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
Query: 354 --CDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
P ++S + N T+I LF+R Q+ + +R+AFL + E M + F E
Sbjct: 362 RKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEM 421
Query: 412 ESNMNDLVSEYQQYQDAT 429
+++ + +Y AT
Sbjct: 422 DTSREIVQQLIDEYHAAT 439
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 289 bits (740), Expect = 3e-78
Identities = 148/434 (34%), Positives = 254/434 (58%), Gaps = 14/434 (3%)
Query: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVP 61
REI+ +Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+P
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
Query: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
RA+L+DLEP + S+ + P+ +++ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
Query: 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP-SPKVSDT 178
+ +E++ D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T+SV P ++SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
Query: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
Query: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDSK 297
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
Query: 298 NMMAACD---PRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
N+M + + Y+ + I +G + +V + + ++ + + F+ W P +++ A+
Sbjct: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
Query: 355 ---DIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
P ++S + N T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
Query: 412 ESN---MNDLVSEY 422
+ + + +L+ EY
Sbjct: 422 DRSREVVQELIDEY 435
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 259 bits (662), Expect = 3e-69
Identities = 150/464 (32%), Positives = 242/464 (52%), Gaps = 39/464 (8%)
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGI--------DPTGSYHGDSDLQLERINVYYN 52
M + V +Q GQCGNQIG FW++ EH + S+ + D ++ +
Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
Query: 53 EATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
+ RA+L+D+E G ++ + GP +F + SG+GNNWA GH G+
Sbjct: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
Query: 113 VDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPS 172
D +L+ RK +E CDCLQ F + HS+GGGTGSG+GT L+ + +E+P+ S+ PS
Sbjct: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
Query: 173 PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR------------TLK---L 217
+ D + PYN+ L++ +L E+ D IDN++L+DI + T+K L
Sbjct: 181 GE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSL 239
Query: 218 TTPTYGDL-----------NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
T + G L N++V+ + +T+ RF G LN DL ++++N+VPFP+LH+
Sbjct: 240 VTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYL 299
Query: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
+ PL + + ++ F + + DP+H YL A + RG + + ++
Sbjct: 300 VSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDL 359
Query: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
+ + K S FV W KT++C +PP G S + N+T ++ F + E+F
Sbjct: 360 RRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFM 417
Query: 387 AMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 418 RLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 189 bits (479), Expect = 6e-48
Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 2/141 (1%)
Query: 284 LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVE 343
L V +LT+QMFD+KNM+AACDP HG YL A I G MSM+EVDEQ N+QNK SSYF
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
Query: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401
WIP+NV+ A CDIPP LKMS TFI N+TAIQEL F+ I EQFTA FR KAFL WY+G+
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
Query: 402 GMDEMEFTEAESNMNDLVSEY 422
GM ++EF E ESNMN+LVSEY
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316
>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 189 bits (479), Expect = 6e-48
Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 2/141 (1%)
Query: 284 LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVE 343
L V +LT+QMFD+KNM+AACDP HG YL A I G MSM+EVDEQ N+QNK SSYF
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
Query: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401
WIP+NV+ A CDIPP LKMS TFI N+TAIQEL F+ I EQFTA FR KAFL WY+G+
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
Query: 402 GMDEMEFTEAESNMNDLVSEY 422
GM ++EF E ESNMN+LVSEY
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316
>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 189 bits (479), Expect = 6e-48
Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 2/141 (1%)
Query: 284 LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVE 343
L V +LT+QMFD+KNM+AACDP HG YL A I G MSM+EVDEQ N+QNK SSYF
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
Query: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401
WIP+NV+ A CDIPP LKMS TFI N+TAIQEL F+ I EQFTA FR KAFL WY+G+
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
Query: 402 GMDEMEFTEAESNMNDLVSEY 422
GM ++EF E ESNMN+LVSEY
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316
>gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
Length = 198
Score = 162 bits (409), Expect = 7e-40
Identities = 99/193 (51%), Positives = 119/193 (61%), Gaps = 8/193 (4%)
Query: 233 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 292
M GVTT L FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ
Sbjct: 1 MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
Query: 293 MFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKT 351
+FD+KNMMAA P + + MKEV+EQML+VQNK+ F NN +
Sbjct: 61 VFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
Query: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
+ P + E +S QF A+ KA LHWY GEGM+EMEF EA
Sbjct: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
Query: 412 ESNMNDLVSEYQQ 424
E+NMND +SE++Q
Sbjct: 174 ENNMNDFISEHRQ 186
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 144 bits (363), Expect = 2e-34
Identities = 110/455 (24%), Positives = 203/455 (44%), Gaps = 43/455 (9%)
Query: 4 IVHIQAGQCGNQIGAKFWE-VISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPR 62
IV +Q GQCGNQIG + ++ ++SD H S + Q +++E + R
Sbjct: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
Query: 63 AILVDLEPGTMDSV--RSGPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDV 119
A+LVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G +S++++
Sbjct: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
Query: 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTV 179
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + + P + +
Sbjct: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
Query: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV--- 238
Query: 240 LRFPGQLNAD---------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----V 286
F +A+ L L ++VP P P S S Y T +
Sbjct: 239 --FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
Query: 287 PELTQQMFDSKNMMAACDPRH----------------GRYLTVAAIFRGRMSMKEVDEQM 330
L Q + + M D RH + L + ++ D Q
Sbjct: 297 KHLRQMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQS 355
Query: 331 LNVQN-KNSSYFVEWIP--NNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
+V+ K+ + + W+ N + SA + NS + + I +
Sbjct: 356 ADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
MF KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
>gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]
Length = 83
Score = 98.6 bits (244), Expect = 1e-20
Identities = 49/76 (64%), Positives = 60/76 (78%)
Query: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
MSATFI N+TAI ELF+ I F AMFR K FL WY GEG DE+EFTEAES+MN+LVS+Y
Sbjct: 1 MSATFISNNTAIHELFRCILGPFMAMFRCKDFLQWYLGEGKDEIEFTEAESSMNNLVSKY 60
Query: 423 QQYQDATADEQGEFEE 438
Q++QDA A E+ +E+
Sbjct: 61 QEHQDAMAKEEEIWED 76
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,149,668
Number of Sequences: 37866
Number of extensions: 768752
Number of successful extensions: 2948
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2716
Number of HSP's gapped (non-prelim): 158
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.