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Search of human proteins with 29570782
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29570782 additional sex combs like 1 [Homo sapiens]
(1541 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29570782 additional sex combs like 1 [Homo sapiens] 3101 0.0
gi|153792780 additional sex combs like 2 [Homo sapiens] 381 e-105
gi|149944526 additional sex combs like 3 [Homo sapiens] 335 2e-91
gi|9966841 cell death regulator aven [Homo sapiens] 52 6e-06
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 49 5e-05
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 48 8e-05
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 48 8e-05
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 47 1e-04
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 47 1e-04
gi|13994190 frizzled 8 [Homo sapiens] 47 2e-04
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 47 2e-04
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 45 4e-04
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 45 5e-04
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 45 5e-04
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 45 5e-04
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs... 45 5e-04
gi|33620755 YEATS domain containing 2 [Homo sapiens] 45 5e-04
gi|238859557 regulatory factor X1 [Homo sapiens] 45 7e-04
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 45 7e-04
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 45 7e-04
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 45 7e-04
gi|194363768 homeobox D9 [Homo sapiens] 44 0.001
gi|109255251 loricrin [Homo sapiens] 44 0.001
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 44 0.001
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 44 0.001
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 44 0.001
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 44 0.002
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 44 0.002
gi|54860079 nadrin isoform 1 [Homo sapiens] 44 0.002
gi|31657109 zinc finger protein 282 [Homo sapiens] 44 0.002
>gi|29570782 additional sex combs like 1 [Homo sapiens]
Length = 1541
Score = 3102 bits (8041), Expect = 0.0
Identities = 1541/1541 (100%), Positives = 1541/1541 (100%)
Query: 1 MKDKQKKKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRSGTSPLACLNAML 60
MKDKQKKKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRSGTSPLACLNAML
Sbjct: 1 MKDKQKKKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRSGTSPLACLNAML 60
Query: 61 HSNSRGGEGLFYKLPGRISLFTLKKDALQWSRHPATVEGEEPEDTADVESCGSNEASTVS 120
HSNSRGGEGLFYKLPGRISLFTLKKDALQWSRHPATVEGEEPEDTADVESCGSNEASTVS
Sbjct: 61 HSNSRGGEGLFYKLPGRISLFTLKKDALQWSRHPATVEGEEPEDTADVESCGSNEASTVS 120
Query: 121 GENDVSLDETSSNASCSTESQSRPLSNPRDSYRASSQANKQKKKTGVMLPRVVLTPLKVN 180
GENDVSLDETSSNASCSTESQSRPLSNPRDSYRASSQANKQKKKTGVMLPRVVLTPLKVN
Sbjct: 121 GENDVSLDETSSNASCSTESQSRPLSNPRDSYRASSQANKQKKKTGVMLPRVVLTPLKVN 180
Query: 181 GAHVESASGFSGCHADGESGSPSSSSSGSLALGSAAIRGQAEVTQDPAPLLRGFRKPATG 240
GAHVESASGFSGCHADGESGSPSSSSSGSLALGSAAIRGQAEVTQDPAPLLRGFRKPATG
Sbjct: 181 GAHVESASGFSGCHADGESGSPSSSSSGSLALGSAAIRGQAEVTQDPAPLLRGFRKPATG 240
Query: 241 QMKRNRGEEIDFETPGSILVNTNLRALINSRTFHALPSHFQQQLLFLLPEVDRQVGTDGL 300
QMKRNRGEEIDFETPGSILVNTNLRALINSRTFHALPSHFQQQLLFLLPEVDRQVGTDGL
Sbjct: 241 QMKRNRGEEIDFETPGSILVNTNLRALINSRTFHALPSHFQQQLLFLLPEVDRQVGTDGL 300
Query: 301 LRLSSSALNNEFFTHAAQSWRERLADGEFTHEMQVRIRQEMEKEKKVEQWKEKFFEDYYG 360
LRLSSSALNNEFFTHAAQSWRERLADGEFTHEMQVRIRQEMEKEKKVEQWKEKFFEDYYG
Sbjct: 301 LRLSSSALNNEFFTHAAQSWRERLADGEFTHEMQVRIRQEMEKEKKVEQWKEKFFEDYYG 360
Query: 361 QKLGLTKEESLQQNVGQEEAEIKSGLCVPGESVRIQRGPATRQRDGHFKKRSRPDLRTRA 420
QKLGLTKEESLQQNVGQEEAEIKSGLCVPGESVRIQRGPATRQRDGHFKKRSRPDLRTRA
Sbjct: 361 QKLGLTKEESLQQNVGQEEAEIKSGLCVPGESVRIQRGPATRQRDGHFKKRSRPDLRTRA 420
Query: 421 RRNLYKKQESEQAGVAKDAKSVASDVPLYKDGEAKTDPAGLSSPHLPGTSSAAPDLEGPE 480
RRNLYKKQESEQAGVAKDAKSVASDVPLYKDGEAKTDPAGLSSPHLPGTSSAAPDLEGPE
Sbjct: 421 RRNLYKKQESEQAGVAKDAKSVASDVPLYKDGEAKTDPAGLSSPHLPGTSSAAPDLEGPE 480
Query: 481 FPVESVASRIQAEPDNLARASASPDRIPSLPQETVDQEPKDQKRKSFEQAASASFPEKKP 540
FPVESVASRIQAEPDNLARASASPDRIPSLPQETVDQEPKDQKRKSFEQAASASFPEKKP
Sbjct: 481 FPVESVASRIQAEPDNLARASASPDRIPSLPQETVDQEPKDQKRKSFEQAASASFPEKKP 540
Query: 541 RLEDRQSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPT 600
RLEDRQSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPT
Sbjct: 541 RLEDRQSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPT 600
Query: 601 TESSCRGWTGARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGG 660
TESSCRGWTGARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGG
Sbjct: 601 TESSCRGWTGARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGG 660
Query: 661 RGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARRED 720
RGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARRED
Sbjct: 661 RGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARRED 720
Query: 721 LPSLRKEESCLLQRATVGLTDGLGDASQLPVAPTGDQPCQALPLLSSQTSVAERLVEQPQ 780
LPSLRKEESCLLQRATVGLTDGLGDASQLPVAPTGDQPCQALPLLSSQTSVAERLVEQPQ
Sbjct: 721 LPSLRKEESCLLQRATVGLTDGLGDASQLPVAPTGDQPCQALPLLSSQTSVAERLVEQPQ 780
Query: 781 LHPDVRTECESGTTSWESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQALDSHPTMKDP 840
LHPDVRTECESGTTSWESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQALDSHPTMKDP
Sbjct: 781 LHPDVRTECESGTTSWESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQALDSHPTMKDP 840
Query: 841 VNVTPSSTPESSPTDCLQNRAFDDELGLGGSCPPMRESDTRQENLKTKALVSNSSLHWIP 900
VNVTPSSTPESSPTDCLQNRAFDDELGLGGSCPPMRESDTRQENLKTKALVSNSSLHWIP
Sbjct: 841 VNVTPSSTPESSPTDCLQNRAFDDELGLGGSCPPMRESDTRQENLKTKALVSNSSLHWIP 900
Query: 901 IPSNDEVVKQPKPESREHIPSVEPQVGEEWEKAAPTPPALPGDLTAEEGLDPLDSLTSLW 960
IPSNDEVVKQPKPESREHIPSVEPQVGEEWEKAAPTPPALPGDLTAEEGLDPLDSLTSLW
Sbjct: 901 IPSNDEVVKQPKPESREHIPSVEPQVGEEWEKAAPTPPALPGDLTAEEGLDPLDSLTSLW 960
Query: 961 TVPSRGGSDSNGSYCQQVDIEKLKINGDSEALSPHGESTDTASDFEGHLTEDSSEADTRE 1020
TVPSRGGSDSNGSYCQQVDIEKLKINGDSEALSPHGESTDTASDFEGHLTEDSSEADTRE
Sbjct: 961 TVPSRGGSDSNGSYCQQVDIEKLKINGDSEALSPHGESTDTASDFEGHLTEDSSEADTRE 1020
Query: 1021 AAVTKGSSVDKDEKPNWNQSAPLSKVNGDMRLVTRTDGMVAPQSWVSRVCAVRQKIPDSL 1080
AAVTKGSSVDKDEKPNWNQSAPLSKVNGDMRLVTRTDGMVAPQSWVSRVCAVRQKIPDSL
Sbjct: 1021 AAVTKGSSVDKDEKPNWNQSAPLSKVNGDMRLVTRTDGMVAPQSWVSRVCAVRQKIPDSL 1080
Query: 1081 LLASTEYQPRAVCLSMPGSSVEATNPLVMQLLQGSLPLEKVLPPAHDDSMSESPQVPLTK 1140
LLASTEYQPRAVCLSMPGSSVEATNPLVMQLLQGSLPLEKVLPPAHDDSMSESPQVPLTK
Sbjct: 1081 LLASTEYQPRAVCLSMPGSSVEATNPLVMQLLQGSLPLEKVLPPAHDDSMSESPQVPLTK 1140
Query: 1141 DQSHGSLRMGSLHGLGKNSGMVDGSSPSSLRALKEPLLPDSCETGTGLARIEATQAPGAP 1200
DQSHGSLRMGSLHGLGKNSGMVDGSSPSSLRALKEPLLPDSCETGTGLARIEATQAPGAP
Sbjct: 1141 DQSHGSLRMGSLHGLGKNSGMVDGSSPSSLRALKEPLLPDSCETGTGLARIEATQAPGAP 1200
Query: 1201 QKNCKAVPSFDSLHPVTNPITSSRKLEEMDSKEQFSSFSCEDQKEVRAMSQDSNSNAAPG 1260
QKNCKAVPSFDSLHPVTNPITSSRKLEEMDSKEQFSSFSCEDQKEVRAMSQDSNSNAAPG
Sbjct: 1201 QKNCKAVPSFDSLHPVTNPITSSRKLEEMDSKEQFSSFSCEDQKEVRAMSQDSNSNAAPG 1260
Query: 1261 KSPGDLTTSRTPRFSSPNVISFGPEQTGRALGDQSNVTGQGKKLFGSGNVAATLQRPRPA 1320
KSPGDLTTSRTPRFSSPNVISFGPEQTGRALGDQSNVTGQGKKLFGSGNVAATLQRPRPA
Sbjct: 1261 KSPGDLTTSRTPRFSSPNVISFGPEQTGRALGDQSNVTGQGKKLFGSGNVAATLQRPRPA 1320
Query: 1321 DPMPLPAEIPPVFPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGSVKNEKTFVGGPLKA 1380
DPMPLPAEIPPVFPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGSVKNEKTFVGGPLKA
Sbjct: 1321 DPMPLPAEIPPVFPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGSVKNEKTFVGGPLKA 1380
Query: 1381 NAENRKATGHSPLELVGHLEGMPFVMDLPFWKLPREPGKGLSEPLEPSSLPSQLSIKQAF 1440
NAENRKATGHSPLELVGHLEGMPFVMDLPFWKLPREPGKGLSEPLEPSSLPSQLSIKQAF
Sbjct: 1381 NAENRKATGHSPLELVGHLEGMPFVMDLPFWKLPREPGKGLSEPLEPSSLPSQLSIKQAF 1440
Query: 1441 YGKLSKLQLSSTSFNYSSSSPTFPKGLAGSVVQLSHKANFGASHSASLSLQMFTDSSTVE 1500
YGKLSKLQLSSTSFNYSSSSPTFPKGLAGSVVQLSHKANFGASHSASLSLQMFTDSSTVE
Sbjct: 1441 YGKLSKLQLSSTSFNYSSSSPTFPKGLAGSVVQLSHKANFGASHSASLSLQMFTDSSTVE 1500
Query: 1501 SISLQCACSLKAMIMCQGCGAFCHDDCIGPSKLCVLCLVVR 1541
SISLQCACSLKAMIMCQGCGAFCHDDCIGPSKLCVLCLVVR
Sbjct: 1501 SISLQCACSLKAMIMCQGCGAFCHDDCIGPSKLCVLCLVVR 1541
>gi|153792780 additional sex combs like 2 [Homo sapiens]
Length = 1435
Score = 381 bits (979), Expect = e-105
Identities = 330/1022 (32%), Positives = 471/1022 (46%), Gaps = 120/1022 (11%)
Query: 1 MKDKQKKKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRSGTSPLACLNAML 60
M++K ++KK RTWAEAA+ VLE Y + PM+ K+ILQVI+ EGLKE+RSGTSPLACLNAML
Sbjct: 1 MREKGRRKKGRTWAEAAKTVLEKYPNTPMSHKEILQVIQREGLKEIRSGTSPLACLNAML 60
Query: 61 HSNSRGGEGLFYKLPGRISLFTLKKDALQWSRHPATVEGEEPEDTADVESCGSNEASTVS 120
H+NSRG EG+FYK+PGR+ ++TLKKD + + E + +D +S ++ +S+
Sbjct: 61 HTNSRGEEGIFYKVPGRMGVYTLKKDVPDGVKELSEGSEESSDGQSDSQSSENSSSSSDG 120
Query: 121 GEND----------VSLDETSSNASCSTESQSRPLS-NPRDSYRASSQANKQ---KKKTG 166
G N VS S T + +S + + S +A QA KQ KK+
Sbjct: 121 GSNKEGKKSRWKRKVSSSSPQSGCPSPTIPAGKVISPSQKHSKKALKQALKQQQQKKQQQ 180
Query: 167 VMLPRVVLTP-----LKVNGAHVESASG----FSGCHADGESGSPSSSSSGSLALGSAAI 217
P + ++ LK A +S + G +DG++GSP +S+S S+++
Sbjct: 181 QCRPSISISSNQHLSLKTVKAASDSVPAKPATWEGKQSDGQTGSPQNSNSSF----SSSV 236
Query: 218 RGQAEVTQDPAPLLRGFRKPATGQMKRNRGEEIDFETPGSILVNTNLRALINSRTFHALP 277
+ + + + + T QMKR + +ID ETP SILVNTNLRALIN TF LP
Sbjct: 237 KVENTLLGLGKKSFQRSERLHTRQMKRTKCADIDVETPDSILVNTNLRALINKHTFSVLP 296
Query: 278 SHFQQQLLFLLPEVDRQVGTDGLLRLSSSALNNEFFTHAAQSWRERLADGEFTHEMQVRI 337
QQ+LL LLPEVDRQVG DGL++L+ SALNNEFFT AAQ W+ERL++GEFT EMQVRI
Sbjct: 297 GDCQQRLLLLLPEVDRQVGPDGLMKLNGSALNNEFFTSAAQGWKERLSEGEFTPEMQVRI 356
Query: 338 RQEMEKEKKVEQWKEKFFEDYYGQKLGLTKEESLQQNVGQEEAEIKSGLCVPGESVRIQR 397
RQE+EKEKKVE WKE+FFE YYGQ GL+ E+S + + ++K +S+ +
Sbjct: 357 RQEIEKEKKVEPWKEQFFESYYGQSSGLSLEDSKKLTASPSDPKVKKTPAEQPKSMPVSE 416
Query: 398 GPATRQRDGHFKKRSRPDLRTRARRNLYKKQESEQAGVAKDAKSVASDVPLYKDGEAKTD 457
R + + + + +K+E E G + S +S+ PL +
Sbjct: 417 ASLIRIVPVVSQSECKEEALQMSSPG--RKEECESQGEVQPNFSTSSE-PLLSSALNTHE 473
Query: 458 PAGLSSPHLPGTSS-------AAPDLEGPEFPVESVASRIQAEPDNLARASASPDRIPSL 510
+ + P + + E + + + ++ ++E S S + P +
Sbjct: 474 LSSILPIKCPKDEDLLEQKPVTSAEQESEKNHLTTASNYNKSESQESLVTSPSKPKSPGV 533
Query: 511 ------------PQET---------VDQEPKDQKRKS--FEQAASASFPEKKPRLEDRQS 547
PQET VDQ P+ KRKS ++ A S+ EK+PR+ + +
Sbjct: 534 EKPIVKPTAGAGPQETNMKEPLATLVDQSPESLKRKSSLTQEEAPVSW-EKRPRVTENRQ 592
Query: 548 FRNTIESVHTEKPQP------TKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPTT 601
+ + PQP + KVPP++I +SRI P + P+ Q+ PR
Sbjct: 593 HQQPFQ----VSPQPFLNRGDRIQVRKVPPLKIPVSRISP---MPFHPS-QVSPRARFPV 644
Query: 602 ESSCRGWTGARTLADIKARALQVRGARGHHCHREAATTAIGGGG---GPGGGGGGATDEG 658
+ TGARTLADIKA+A V+ R AA A GG GPG GGG EG
Sbjct: 645 SITSPNRTGARTLADIKAKAQLVKAQRAAAAAAAAAAAAASVGGTIPGPGPGGGQGPGEG 704
Query: 659 GGRGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRT-QLLPPYPLNGEHTQAGTAMSRAR 717
G ++ G + E GP+ T T +LLP P ++ T S+A+
Sbjct: 705 GEGQTARGGSPGSDRVSETGKGPTLELAGTGSRGGTRELLPCGPETQPQSETKTTPSQAQ 764
Query: 718 REDLPSLRKEESCLLQRATVGLTDGLGDASQLPVAPTGDQPCQALPLLSSQTSVAERLVE 777
+ + L Q V T + A +P + L ++ + V
Sbjct: 765 PHSVSGAQ-----LQQTPPVPPTPAVSGACTSVPSPAHIEKLDNEKLNPTRATATVASVS 819
Query: 778 QPQLHPDVRTECESGTTSWESDDEEQGPTVPADNGPIPSLVGDDTLEKGTG-------QA 830
PQ R E T GP + + P+ D T+E G +
Sbjct: 820 HPQGPSSCRQEKAPSPT---------GPALISGASPV-HCAADGTVELKAGPSKNIPNPS 869
Query: 831 LDSHPTMKDPVNVTPSSTPESSPTDCLQNRAFDD---ELGLGGSCPPMRESDTRQENLKT 887
S PV VTPS T L+ GS PP +
Sbjct: 870 ASSKTDASVPVAVTPSPLTSLLTTATLEKLPVPQVSATTAPAGSAPP------------S 917
Query: 888 KALVSNSSLHWIPIPSNDEVVKQPKPESREHIPSVEPQVGEEWE-KAAPTPPALPGDLTA 946
L + SSL P + P IP+ P V + + K P LP LT
Sbjct: 918 STLPAASSL---KTPGTSLNMNGPTLRPTSSIPANNPLVTQLLQGKDVPMEQILPKPLTK 974
Query: 947 EE 948
E
Sbjct: 975 VE 976
Score = 90.5 bits (223), Expect = 1e-17
Identities = 37/60 (61%), Positives = 48/60 (80%)
Query: 1482 ASHSASLSLQMFTDSSTVESISLQCACSLKAMIMCQGCGAFCHDDCIGPSKLCVLCLVVR 1541
+SH ++ +Q F++ +++E +C C LKAMIMC+GCGAFCHDDCIGPSKLCV CLVVR
Sbjct: 1376 SSHGQTIPVQAFSEENSIEGTPSKCYCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR 1435
Score = 42.0 bits (97), Expect = 0.005
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 1077 PDSLLLASTEYQPRAVCLSM------PGSSVEATNPLVMQLLQG-SLPLEKVLPPAHDDS 1129
P S L A++ + L+M P SS+ A NPLV QLLQG +P+E++LP +
Sbjct: 916 PSSTLPAASSLKTPGTSLNMNGPTLRPTSSIPANNPLVTQLLQGKDVPMEQILPKPL--T 973
Query: 1130 MSESPQVPLTKDQSHGSLRMGSL 1152
E VPLT + G MG+L
Sbjct: 974 KVEMKTVPLTAKEERG---MGAL 993
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 335 bits (859), Expect = 2e-91
Identities = 300/988 (30%), Positives = 440/988 (44%), Gaps = 148/988 (14%)
Query: 1 MKDKQKKKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRSGTSPLACLNAML 60
MKDK +KKK+RTWAEAARL LE + ++PMT KQIL+VI+ EGLKE SGTSPLACLNAML
Sbjct: 1 MKDK-RKKKDRTWAEAARLALEKHPNSPMTAKQILEVIQKEGLKET-SGTSPLACLNAML 58
Query: 61 HSNSRGGEGLFYKLPGRISLFTLKKDALQWSRHPATVEGEEPED-------TADVESCGS 113
H+N+R G+G F+K+PG+ L+ LKK+ E P D ++++
Sbjct: 59 HTNTRIGDGTFFKIPGKSGLYALKKE-----------ESSCPADGTLDLVCESELDGTDM 107
Query: 114 NEASTVSGENDVSLDETSSNASCSTES-------QSRPLSN-PRDSYRASSQA--NKQKK 163
EA+ EN V + + AS + +S QS+ +S+ + + +A QA +QK+
Sbjct: 108 AEANAHGEENGVCSKQVTDEASSTRDSSLTNTAVQSKLVSSFQQHTKKALKQALRQQQKR 167
Query: 164 KTGVML------PRVVLTPLKVNGAHVESASGFSGCHADGESGSPSSSSSGSLALGSAAI 217
+ GV + PRVVLTPLKV+ +S SG + + +S
Sbjct: 168 RNGVSMMVNKTVPRVVLTPLKVSDEQSDSPSGSESKNGEADSSDKEMK------------ 215
Query: 218 RGQAEVT-QDPAPLLRGFRKPATGQMKRNRGEEIDFETPGSILVNTNLRALINSRTFHAL 276
GQ T + + L+ +K G +K + E+ID ETPGSILVNTNLRALIN TF +L
Sbjct: 216 HGQKSPTGKQTSQHLKRLKKSGLGHLKWTKAEDIDIETPGSILVNTNLRALINKHTFASL 275
Query: 277 PSHFQQQLLFLLPEVDRQVGTDGLLRLSSSALNNEFFTHAAQSWRERLADGEFTHEMQVR 336
P HFQQ LL LLPEVDRQ+G+DG+LRLS+SALNNEFF +AAQ W++RLA+GEFT EMQ+R
Sbjct: 276 PQHFQQYLLLLLPEVDRQMGSDGILRLSTSALNNEFFAYAAQGWKQRLAEGEFTPEMQLR 335
Query: 337 IRQEMEKEKKVEQWKEKFFEDYYGQKLGLTKEESLQQNVGQEEAEIKSGLCVPGESVRIQ 396
IRQE+EKEKK E WKEKFFE +YG+KLG+++EES++ G A +S + +
Sbjct: 336 IRQEIEKEKKTEPWKEKFFERFYGEKLGMSREESVKLTTGPNNAGAQSSSSCGTSGLPVS 395
Query: 397 RGPA-TRQRDGHFKKRSRPDLRTRAR---------RNLYKKQESEQAGVAKD-------A 439
A Q+ K + P+ A +++ + ESE + ++ A
Sbjct: 396 AQTALAEQQPKSMKSPASPEPGFCATLCPMVEIPPKDIMAELESEDILIPEESVIQEEIA 455
Query: 440 KSVASDVPLYKDGEAKTDPAGLSSPHLPGTSSAAPDLEGPEFPVESVASRIQAEPDNLAR 499
+ V + + +D KT P S P + PE DNL
Sbjct: 456 EEVETSICECQDENHKTIPEFSEEAESLTNSHEEPQIAPPE--------------DNLES 501
Query: 500 ASASPDRIPSLPQETVDQEPKDQKRKSFEQAASASFPEKKPRLEDRQSFRNTIESVHTEK 559
D + +LP V E K + + + S + ++ H K
Sbjct: 502 CVMMNDVLETLPHIEVKIEGKSESPQEEMTVVIDQLEVCDSLIPSTSSMTHVSDTEH--K 559
Query: 560 PQPTKEEPKVPPIRIQLSRIKPPWVVKG---------QPTYQICPR-IIPTTESSCRGWT 609
T E P I+ S ++ + +G P Q+ I T S
Sbjct: 560 ESETAVETSTPKIKTGSSSLEGQFPNEGIAIDMELQSDPEEQLSENACISETSFSSESPE 619
Query: 610 GARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGG 669
GA T +L G E+ T A + + +S+ +
Sbjct: 620 GACT-------SLPSPGGETQSTSEESCTPASLETTFCSEVSSTENTDKYNQRNSTDENF 672
Query: 670 EACGHPEPRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGT---AMSRARREDLPSLRK 726
A E +P + ++ L+ PL E + + DLP L
Sbjct: 673 HASLMSE-----ISPISTSPEISEASLMSNLPLTSEASPVSNLPLTSETSPMSDLP-LTS 726
Query: 727 EESCLLQRATVGLTDGLGDASQLPVAPTGDQPCQALPLLSSQTSVAERLVEQPQLHPDVR 786
E S + +++ LT S LP+ P + P+ S +S+ ER+ Q + P V
Sbjct: 727 ETSSV---SSMLLTSETTFVSSLPL------PSETSPI--SNSSINERMAHQQRKSPSVS 775
Query: 787 TECESGTTSWESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQALDSHPTMKDPVNVTPS 846
E S DE P E T Q + T + + + S
Sbjct: 776 EEPLS-----PQKDESSATAKPLG-------------ENLTSQQKNLSNTPEPIIMSSSS 817
Query: 847 STPESSPTDCLQNRAF---------DDELGLGGSCPPMRESDTRQENLKTKALVSNSSLH 897
PE+ P++ L N+ D E S P + + T +K +++ +
Sbjct: 818 IAPEAFPSEDLHNKTLSQQTCKSHVDTEKPYPASIPEL--ASTEMIKVKNHSVLQRTEKK 875
Query: 898 WIPIPSNDEVVKQPKPESREHIPSVEPQ 925
+P P V + +PS + Q
Sbjct: 876 VLPSPLELSVFSEGTDNKGNELPSAKLQ 903
Score = 110 bits (275), Expect = 1e-23
Identities = 78/231 (33%), Positives = 111/231 (48%), Gaps = 21/231 (9%)
Query: 1317 PRPADPMPLPAEIPPV-FPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGSVKNEKTFVG 1375
P P P PLP +P PS + P + T R W P+ ++K+E
Sbjct: 2033 PPPPPPPPLPPPLPNAEVPSDQKQPPVTMET----TKRLSW-PQSTGICSNIKSEPLSFE 2087
Query: 1376 GPLKANAE-NRKATGHSPLELVGHLEGMPFVMDLPFWKLPREPGKGLSEPLEP----SSL 1430
L ++ E K + E+ L+ K LSEP +P ++
Sbjct: 2088 EGLSSSCELGMKQVSYDQNEMKEQLKAFAL-------KSADFSSYLLSEPQKPFTQLAAQ 2140
Query: 1431 PSQLSIKQAFYGKLSKLQLSSTSFNYSSSSPTFPKGLAGSVVQLSHKANFGASHSASLSL 1490
Q+ +Q G + STSF ++S+ G+ GS S+ A + +A + +
Sbjct: 2141 KMQVQQQQQLCGNYPTIHFGSTSFKRAASAIEKSIGILGSG---SNPATGLSGQNAQMPV 2197
Query: 1491 QMFTDSSTVESISLQCACSLKAMIMCQGCGAFCHDDCIGPSKLCVLCLVVR 1541
Q F DSS + + L+C+C LKAMI+C+GCGAFCHDDCIGPSKLCV CLVVR
Sbjct: 2198 QNFADSSNADELELKCSCRLKAMIVCKGCGAFCHDDCIGPSKLCVACLVVR 2248
Score = 106 bits (265), Expect = 2e-22
Identities = 68/166 (40%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 497 LARASASPDRIPSLPQETVDQEPKDQ---KRKSFEQAASASFPEKKPRLEDRQSFRNTIE 553
L + S PS + + E +D KRK+ EQ + EK+ R+ED QS RN
Sbjct: 934 LETSHTSKSSEPSKSPDGIRNESRDSEISKRKTAEQHSFGICKEKRARIEDDQSTRNISS 993
Query: 554 SVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPTTESSCRGWTGART 613
S EK QP +EEP+VPP++IQLS+I PP+++K QP + R +T S TGART
Sbjct: 994 SSPPEKEQPPREEPRVPPLKIQLSKIGPPFIIKSQPVSKPESRASTSTSVSGGRNTGART 1053
Query: 614 LADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGG 659
LADIKARA Q R R AA A+ G G+ EGG
Sbjct: 1054 LADIKARAQQARAQR-----EAAAAAAVAAAASIVSGAMGSPGEGG 1094
Score = 49.7 bits (117), Expect = 2e-05
Identities = 106/494 (21%), Positives = 168/494 (34%), Gaps = 85/494 (17%)
Query: 675 PEPRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARREDLPSLRKEESCLLQR 734
P P G + P TS + L+PP +N A+ + + S+ R
Sbjct: 1342 PTPSIGNNLPNLSTSSV----LIPPMGINNRFPSEKIAIPGSEEQATVSMGTTV-----R 1392
Query: 735 ATVGLTDGLGDASQLPVAPTGDQPCQALPLLSSQTSVAERLVEQPQLHPDVRTECESGTT 794
A + +D + L PT + + + P+L
Sbjct: 1393 AALSCSDSVAVTDSLVAHPT-------VAMFTGNMLTINSYDSPPKL------------- 1432
Query: 795 SWESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQAL------DSHPTMKDPVNVTPSST 848
S ES D+ GP ADN P +++ D T+ +++T S
Sbjct: 1433 SAESLDKNSGPRNRADNSGKPQQPPGGFAPAAINRSIPCKVIVDHSTTLTSSLSLTVSVE 1492
Query: 849 PESSPTDCLQNRAFDDELGLGGSCPPMRESDTRQENLKTKALVSNSSLHWIPIPSNDEVV 908
+ D LQ R E + P +R E + + + +S+ D
Sbjct: 1493 SSEASLD-LQGRPVRTEASVQPVACPQVSVISRPEPVANEGIDHSSTFIAASAAKQDSKT 1551
Query: 909 KQPKPESREHIPSVEPQVGEEW--------EKAAPTPPALPGDLTAEEGLDPLDSLTSLW 960
S +P V ++ E + P P D T +P + + W
Sbjct: 1552 LPATCTSLRELPLVPDKLNEPTAPSHNFAEQARGPAPFKSEADTTCSNQYNPSNRIC--W 1609
Query: 961 T----------VPSRGGSDSNGSYCQQVDIEKLKINGDS----EALSPHGESTDTASDFE 1006
+ + GS Y +Q + +K + L P T+ A +
Sbjct: 1610 NDDGMRSTGQPLVTHSGSSKQKEYLEQSCPKAIKTEHANYLNVSELHPRNLVTNVALPVK 1669
Query: 1007 GHLTEDSSEADTREAAVTKGSSVDKDEKPNWNQSAPLSKVNGDMRLVTRTDGMVAPQSWV 1066
L EAD KG +D ++ P P ++ V +T M A S
Sbjct: 1670 SEL----HEAD-------KGFRMDTEDFPGPELPPPAAEGASS---VQQTQNMKASTS-- 1713
Query: 1067 SRVCAVRQKIPDSLLLASTEYQ--PRAVCLSMPGSSVEATNPLVMQLLQGSLPLEKVLPP 1124
+ +++ LA+ + P A SSVEA NPLV QLLQG+LPLEKVLP
Sbjct: 1714 -------SPMEEAISLATDALKRVPGAGSSGCRLSSVEANNPLVTQLLQGNLPLEKVLPQ 1766
Query: 1125 AHDDSMSESPQVPL 1138
+ E ++PL
Sbjct: 1767 PRLGAKLEINRLPL 1780
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 51.6 bits (122), Expect = 6e-06
Identities = 103/374 (27%), Positives = 141/374 (37%), Gaps = 68/374 (18%)
Query: 625 RGARGHHCHRE----AATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGG 680
RG G H E AA A GGGGG GG GGG G GRG GG G PRG
Sbjct: 17 RGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRGRGFRGARGGRG-GGGAPRGS 75
Query: 681 PSTPG--------KCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARREDLPSLRKEESCLL 732
PG D G +++ + R +D+ ES
Sbjct: 76 RREPGGWGAGASAPVEDDSDAETYGEENDEQGNYSKRKIVSNWDRYQDIEKEVNNESGES 135
Query: 733 QRAT--VGLTDGLGDA-SQLPVAPTGDQPCQA-LPLLSSQTSV-AERLVEQPQ-----LH 782
QR T L GD+ SQ A + +A P +S V +E LV Q L
Sbjct: 136 QRGTDFSVLLSSAGDSFSQFRFAEEKEWDSEASCPKQNSAFYVDSELLVRALQELPLCLR 195
Query: 783 PDVRTECESGTTSWE--------SDD------EEQGPTVPADNGPIPSLVGDDTLEKGTG 828
+V E GT E +DD + +GP P GPI L ++ G
Sbjct: 196 LNVAAELVQGTVPLEVPQVKPKRTDDGKGLGMQLKGPLGPGGRGPIFEL---KSVAAGC- 251
Query: 829 QALDSHPTMKDPVNVTPSSTPES-SPTDCLQNRA--FDDELGLGGSC-PPMRESDTRQEN 884
P + N +P + +S PT LQ+ ++EL L + P++E D +
Sbjct: 252 ------PVLLGKDNPSPGPSRDSQKPTSPLQSAGDHLEEELDLLLNLDAPIKEGDNILPD 305
Query: 885 LKTKALVSNSSLHWIPIPSNDEVVKQPKPESREHIPSVEPQVGEEWEKAAPTPPALPGDL 944
++ L S + EVV +E +P V EE + P P+ ++
Sbjct: 306 QTSQDLKSK---------EDGEVV-------QEEEVCAKPSVTEE-KNMEPEQPSTSKNV 348
Query: 945 TAEEGLDPLDSLTS 958
T EE D LDS+ S
Sbjct: 349 TEEELEDWLDSMIS 362
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 48.5 bits (114), Expect = 5e-05
Identities = 27/70 (38%), Positives = 33/70 (47%)
Query: 607 GWTGARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSG 666
G+ A++L ALQ G H H+ + GGGGG GGGGGG GGG G S
Sbjct: 33 GYREAQSLVQGDYGALQSNGHPLSHAHQWITALSHGGGGGGGGGGGGGGGGGGGGGDGSP 92
Query: 667 DGGEACGHPE 676
G P+
Sbjct: 93 WSTSPLGQPD 102
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 47.8 bits (112), Expect = 8e-05
Identities = 198/951 (20%), Positives = 331/951 (34%), Gaps = 150/951 (15%)
Query: 522 QKRKSFEQAASASFPEKKPRLEDRQSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKP 581
+KRK+ E AA + KK R+ D S + E + + K P++ +
Sbjct: 61 RKRKAEEDAALQA---KKTRVSDPISTSESSEEEEEAEAETAKATPRLASTNSSVLGADL 117
Query: 582 PWVVKGQPTYQICPRIIPTTESSCRGWTGARTLADIKARALQVRGARGH-------HCHR 634
P +K + + + T S TG +T+A++ + + A
Sbjct: 118 PSSMKEKAKAET-EKAGKTGNSMPHPATG-KTVANLLSGKSPRKSAEPSANTTLVSETEE 175
Query: 635 EAATTAIGGGGGPGGGGGGATDEGGGRGSSSGD------------------GGEACGHPE 676
E + A G PG G D SSS D A G P
Sbjct: 176 EGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVRAASAPAKGTPG 235
Query: 677 PRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARREDLPSLRKEESCLLQRAT 736
P+ PGK + +T+ P E +++ + S E+ P+ + LLQ
Sbjct: 236 KGATPAPPGKAGAVASQTKAGKPE----EDSESSSEESSDSEEETPAAK----ALLQAKA 287
Query: 737 VGLTDGLGDASQLPVAPTGDQPCQ-ALPLLSSQTSVAERLVEQPQLHPDVRTECESGTTS 795
G T +G AS AP + P + A P +T A + + D S ++S
Sbjct: 288 SGKTSQVGAAS----APAKESPRKGAAPAPPGKTGPAVAKAQAGKREED------SQSSS 337
Query: 796 WESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQALDSHPTMKDPVNVTPSSTPESSPTD 855
ESD EE+ P +G P + S P + P + P +
Sbjct: 338 EESDSEEEAPAQAKPSGKAPQV------------RAASAPAKESPRKGAAPAPPRKTGPA 385
Query: 856 CLQNRAFDDELGLGGSCPPMRESDTRQENLKTKALVSNSSLHWIPIPSNDEVVKQPKPES 915
Q + E S ESD+ +E AL + ++ P+ + +V
Sbjct: 386 AAQVQVGKQE---EDSRSSSEESDSDRE-----ALAAMNAAQVKPLGKSPQVK------- 430
Query: 916 REHIPSVEPQVGEEWEKAAPTPPALPGDLT--AEEGLDPLDSLTSLWTVPSRGGSDSNGS 973
P+ +G + A P PP G T A+ G DS +S S SDS+
Sbjct: 431 ----PASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS-----SEESSDSSDG 481
Query: 974 YCQQVDIEKLKINGDSEALSPHGESTDTASDFEGHLTEDSSEADTREAAVTKGSSVDKDE 1033
++ ++L ++ T+S +G + A +A +S +E
Sbjct: 482 -----EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE 536
Query: 1034 KPNWNQSAPLSKVNGDMRLVTRTDGMVAPQSWVSRVCAVRQKIPDSLLLASTEYQPRAVC 1093
+ SA + M + PQ ++ C + AS + P V
Sbjct: 537 S---SDSADSEEAPAAMTAAQAKPALKIPQ---TKACPKKTN-----TTASAKVAPVRVG 585
Query: 1094 LSMPGSSVEATNPLVMQLLQGSLPLEK--VLPPAHDDSMSESPQVPLTKDQSHG-SLRMG 1150
P + AT+P GS P PA D S SE ++++ G ++ +G
Sbjct: 586 TQAPRKAGTATSP------AGSSPAVAGGTQRPAEDSSSSEESD---SEEEKTGLAVTVG 636
Query: 1151 SLHGLGKNSGMVDGSSP--SSLRALKEPLLPDSCETGTGLARIEATQAPGAPQKNCKAVP 1208
+GK + S P SL P+LP +TG + +++A + + ++
Sbjct: 637 QAKSVGKGLQVKAASVPVKGSLGQGTAPVLPG--KTGPTVTQVKAEKQEDSESSEEES-- 692
Query: 1209 SFDSLHPVTNPITSSRKLEEMDSKEQFSSFSCEDQKEVRAMSQDSNSNAAPGK--SPGDL 1266
DS +P +++ +K ++ K + + AA K SP +
Sbjct: 693 --DSEEAAASPAQVKTSVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKV 750
Query: 1267 TTS-RTPRFSSPNVISFGP---EQTGRALGDQSNVTGQGKKLFGSGNVAATLQRPRPADP 1322
R P+ S+ V++ GP G+A+ + ++ GS +D
Sbjct: 751 KPPVRNPQNST--VLARGPASVPSVGKAVATAAQAQTGPEEDSGSSE--------EESDS 800
Query: 1323 MPLPAEIPPVFPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGSVKNEKTFVGGPLKANA 1382
+ V PSGK +++ ++PR+ AP P KT GP A A
Sbjct: 801 EEEAETLAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPG--------KT---GPSAAQA 849
Query: 1383 ENRKATGHSPLELVGHLEGMPFVMDLPFWKLPREPGKGLSEPLEPSSLPSQ 1433
+ +G S E E V K P P P++ P+Q
Sbjct: 850 GKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQ 900
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
sapiens]
Length = 1411
Score = 47.8 bits (112), Expect = 8e-05
Identities = 198/951 (20%), Positives = 331/951 (34%), Gaps = 150/951 (15%)
Query: 522 QKRKSFEQAASASFPEKKPRLEDRQSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKP 581
+KRK+ E AA + KK R+ D S + E + + K P++ +
Sbjct: 61 RKRKAEEDAALQA---KKTRVSDPISTSESSEEEEEAEAETAKATPRLASTNSSVLGADL 117
Query: 582 PWVVKGQPTYQICPRIIPTTESSCRGWTGARTLADIKARALQVRGARGH-------HCHR 634
P +K + + + T S TG +T+A++ + + A
Sbjct: 118 PSSMKEKAKAET-EKAGKTGNSMPHPATG-KTVANLLSGKSPRKSAEPSANTTLVSETEE 175
Query: 635 EAATTAIGGGGGPGGGGGGATDEGGGRGSSSGD------------------GGEACGHPE 676
E + A G PG G D SSS D A G P
Sbjct: 176 EGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVRAASAPAKGTPG 235
Query: 677 PRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARREDLPSLRKEESCLLQRAT 736
P+ PGK + +T+ P E +++ + S E+ P+ + LLQ
Sbjct: 236 KGATPAPPGKAGAVASQTKAGKPE----EDSESSSEESSDSEEETPAAK----ALLQAKA 287
Query: 737 VGLTDGLGDASQLPVAPTGDQPCQ-ALPLLSSQTSVAERLVEQPQLHPDVRTECESGTTS 795
G T +G AS AP + P + A P +T A + + D S ++S
Sbjct: 288 SGKTSQVGAAS----APAKESPRKGAAPAPPGKTGPAVAKAQAGKREED------SQSSS 337
Query: 796 WESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQALDSHPTMKDPVNVTPSSTPESSPTD 855
ESD EE+ P +G P + S P + P + P +
Sbjct: 338 EESDSEEEAPAQAKPSGKAPQV------------RAASAPAKESPRKGAAPAPPRKTGPA 385
Query: 856 CLQNRAFDDELGLGGSCPPMRESDTRQENLKTKALVSNSSLHWIPIPSNDEVVKQPKPES 915
Q + E S ESD+ +E AL + ++ P+ + +V
Sbjct: 386 AAQVQVGKQE---EDSRSSSEESDSDRE-----ALAAMNAAQVKPLGKSPQVK------- 430
Query: 916 REHIPSVEPQVGEEWEKAAPTPPALPGDLT--AEEGLDPLDSLTSLWTVPSRGGSDSNGS 973
P+ +G + A P PP G T A+ G DS +S S SDS+
Sbjct: 431 ----PASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS-----SEESSDSSDG 481
Query: 974 YCQQVDIEKLKINGDSEALSPHGESTDTASDFEGHLTEDSSEADTREAAVTKGSSVDKDE 1033
++ ++L ++ T+S +G + A +A +S +E
Sbjct: 482 -----EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE 536
Query: 1034 KPNWNQSAPLSKVNGDMRLVTRTDGMVAPQSWVSRVCAVRQKIPDSLLLASTEYQPRAVC 1093
+ SA + M + PQ ++ C + AS + P V
Sbjct: 537 S---SDSADSEEAPAAMTAAQAKPALKIPQ---TKACPKKTN-----TTASAKVAPVRVG 585
Query: 1094 LSMPGSSVEATNPLVMQLLQGSLPLEK--VLPPAHDDSMSESPQVPLTKDQSHG-SLRMG 1150
P + AT+P GS P PA D S SE ++++ G ++ +G
Sbjct: 586 TQAPRKAGTATSP------AGSSPAVAGGTQRPAEDSSSSEESD---SEEEKTGLAVTVG 636
Query: 1151 SLHGLGKNSGMVDGSSP--SSLRALKEPLLPDSCETGTGLARIEATQAPGAPQKNCKAVP 1208
+GK + S P SL P+LP +TG + +++A + + ++
Sbjct: 637 QAKSVGKGLQVKAASVPVKGSLGQGTAPVLPG--KTGPTVTQVKAEKQEDSESSEEES-- 692
Query: 1209 SFDSLHPVTNPITSSRKLEEMDSKEQFSSFSCEDQKEVRAMSQDSNSNAAPGK--SPGDL 1266
DS +P +++ +K ++ K + + AA K SP +
Sbjct: 693 --DSEEAAASPAQVKTSVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKV 750
Query: 1267 TTS-RTPRFSSPNVISFGP---EQTGRALGDQSNVTGQGKKLFGSGNVAATLQRPRPADP 1322
R P+ S+ V++ GP G+A+ + ++ GS +D
Sbjct: 751 KPPVRNPQNST--VLARGPASVPSVGKAVATAAQAQTGPEEDSGSSE--------EESDS 800
Query: 1323 MPLPAEIPPVFPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGSVKNEKTFVGGPLKANA 1382
+ V PSGK +++ ++PR+ AP P KT GP A A
Sbjct: 801 EEEAETLAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPG--------KT---GPSAAQA 849
Query: 1383 ENRKATGHSPLELVGHLEGMPFVMDLPFWKLPREPGKGLSEPLEPSSLPSQ 1433
+ +G S E E V K P P P++ P+Q
Sbjct: 850 GKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQ 900
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 47.4 bits (111), Expect = 1e-04
Identities = 40/120 (33%), Positives = 45/120 (37%), Gaps = 13/120 (10%)
Query: 555 VHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPTTESSCRGWTGARTL 614
VH PQ ++ P PP +V P P + S+ A
Sbjct: 414 VHESSPQGSESSPAASS---GYESSTPPGLVS--------PSAEPQSSSNLSPAAAAAAA 462
Query: 615 ADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGH 674
A A A RG A GGG G GGGGGGA GGG GSS G G A GH
Sbjct: 463 AAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGA--GGGGGGSSGGGSGTAGGH 520
Score = 41.2 bits (95), Expect = 0.008
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 636 AATTAI--GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPS 682
AA +A+ GGG G GG GGG+ GGG GS G GG G GG S
Sbjct: 469 AAVSAVHRGGGSGSGGAGGGS---GGGSGSGGGGGGAGGGGGGSSGGGS 514
Score = 40.8 bits (94), Expect = 0.010
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPS 682
G GG GG GGG+ GGG G+ G GG + G GG S
Sbjct: 481 GSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHS 521
Score = 37.7 bits (86), Expect = 0.087
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 643 GGGGPGGGGGGATDEGGGRGSSSGDGG 669
GGGG G GGGG GGG G++ G G
Sbjct: 496 GGGGGGAGGGGGGSSGGGSGTAGGHSG 522
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 47.4 bits (111), Expect = 1e-04
Identities = 62/238 (26%), Positives = 86/238 (36%), Gaps = 36/238 (15%)
Query: 490 IQAEPDNLARASASPDRIPSLPQETVD----QEPKDQKRKSFEQAASASFPEKKPRLEDR 545
+Q + ARA+ + L +T+D EPK + K ++AASA + RL D
Sbjct: 60 VQYSNERHARAAVLGENGRVLAGQTLDINMAGEPKPDRPKGLKRAASAIY-----RLFD- 113
Query: 546 QSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPTTESSC 605
+R + V + P K P + + L R VK ++ R T SS
Sbjct: 114 --YRGRLSPVPVPRAVPVKR----PRVTVPLVRR-----VKTNVPVKLFARSTAVTTSSA 162
Query: 606 RGWTGARTLADIKARALQVRGARGHHCHREAATTAI----------GGGGGPGGGGGGAT 655
+ + L IK Q++ R A G GGG GGGGGG
Sbjct: 163 KIKLKSSELQAIKTELTQIKSNIDALLSRLEQIAAEQKANPDGKKKGDGGGAGGGGGGGG 222
Query: 656 DEGGGRGSSSGDGGEACGHPEPR-----GGPSTPGKCTSDLQRTQLLPPYPLNGEHTQ 708
GGG G G G P+ G P + D LL EH+Q
Sbjct: 223 SGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDGDEEGLLTHSEEELEHSQ 280
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 46.6 bits (109), Expect = 2e-04
Identities = 20/31 (64%), Positives = 20/31 (64%)
Query: 636 AATTAIGGGGGPGGGGGGATDEGGGRGSSSG 666
A TA GGGGGPGGGGGG GGG G G
Sbjct: 633 AGATAAGGGGGPGGGGGGGPGGGGGPGGGGG 663
Score = 35.8 bits (81), Expect = 0.33
Identities = 18/36 (50%), Positives = 18/36 (50%)
Query: 645 GGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGG 680
G GGG GAT GGG G G GG G P GG
Sbjct: 626 GAAVGGGAGATAAGGGGGPGGGGGGGPGGGGGPGGG 661
Score = 35.8 bits (81), Expect = 0.33
Identities = 16/34 (47%), Positives = 17/34 (50%)
Query: 640 AIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACG 673
A+GGG G GGG GGG G G GG G
Sbjct: 628 AVGGGAGATAAGGGGGPGGGGGGGPGGGGGPGGG 661
Score = 31.6 bits (70), Expect = 6.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 624 VRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGG 669
VR GH + A + G GG GG GG A G + G GG
Sbjct: 329 VRLVAGHE--KVACSGGAPGAGGAGGAGGAAAGAGAAGAGAGGPGG 372
Score = 31.2 bits (69), Expect = 8.1
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 644 GGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRG 679
GG PG GG G GG + +G G G P RG
Sbjct: 342 GGAPGAGGAGGA---GGAAAGAGAAGAGAGGPGGRG 374
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 46.6 bits (109), Expect = 2e-04
Identities = 128/619 (20%), Positives = 206/619 (33%), Gaps = 101/619 (16%)
Query: 337 IRQEMEKEKKVEQWKEKFFEDYYGQKLGLTKE-------------------ESLQQNVGQ 377
I +ME+ K VE +E + Y + LGL ++ ++L V Q
Sbjct: 84 IETQMERFKVVE--RETKTKAYSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQ 141
Query: 378 EEAEIKSGLCVPGESVRIQRGPATRQRDGHFKKRSRPD-LRTRARRNLYKKQESEQAGVA 436
E+E+ ES+ +Q TR++ G K+ R + L+ ++ Y + E
Sbjct: 142 FESEV--------ESLSVQ----TRKKKGDKDKQDRIEGLKRHIEKHRYHVRMLETILRM 189
Query: 437 KDAKSVASDV--PLYKDGEAKTDPAGLSSPHLPGTSSAAPDLEGPEFPVESVA----SRI 490
D S+ D + D E D + P DL+ + P VA S
Sbjct: 190 LDNDSILVDAIRKIKDDVEYYVDSS--QDPDFEENEFLYDDLDLEDIPQALVATSPPSHS 247
Query: 491 QAEPDNLARASASPDR------IPSLPQETVDQEPKDQKRKSFEQAASASFPEKKPRLED 544
E + ++S++P IP P + +D K++ + S K +
Sbjct: 248 HMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSPAKNGSKP 307
Query: 545 RQSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPTTESS 604
S + H + P P PP P G P P + S
Sbjct: 308 VHS------NQHPQSPAVPPTYPSGPPPAASALSTTPG--NNGVPAPAAPPSALGPKASP 359
Query: 605 CRGWTGARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSS 664
+A A R + GGGGG GGGG ++ G
Sbjct: 360 APSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGG 419
Query: 665 SGDGGEACGHPE-PRGGPSTPGKCTSDLQRTQLLPPYPLNGEHTQAGTAMSRARREDLPS 723
+G A + P+ +S P +G H PS
Sbjct: 420 AGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPP------------PS 467
Query: 724 LRKEESCLLQRATVGLTDGLGDAS-------QLPVAPTGDQPCQALPLLSSQTSVAERLV 776
KE S G+ G G+ S LPV P P P S + L
Sbjct: 468 TSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPVNP----PSSPTPSFSDAKAAGALLN 523
Query: 777 EQPQLHPDVRTECESGTTSWESDDEEQGPTVPADNGPIPSLVGDDTLEKGTGQALDSHPT 836
PQ + +S +S E + ++ P+P+L H T
Sbjct: 524 GPPQFSTAPEIKAPEPLSSLKSMAERAAISSGIED-PVPTL----------------HLT 566
Query: 837 MKDPVNVTPSSTPESSPTDCLQNRAFDDELGLGGSCPPMRESDTRQENLKTKALVSNSSL 896
+D + ++ +S P +S LQ + L LG P+ +E L +A+ ++
Sbjct: 567 ERD-IILSSTSAPPASAQPPLQLSEVNIPLSLG--VCPLGPVPLTKEQLYQQAM-EEAAW 622
Query: 897 HWIPIPSNDEVVKQPKPES 915
H +P PS+ E ++Q P +
Sbjct: 623 HHMPHPSDSERIRQYLPRN 641
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 45.4 bits (106), Expect = 4e-04
Identities = 29/67 (43%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 627 ARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGK 686
A G H +AA GGGGG GGGGGGA GGG G G G RG PS+
Sbjct: 17 AAGSIVHSDAAGAGGGGGGGGGGGGGGA--GGGGGGMQPGSAAVTSG--AYRGDPSSVKM 72
Query: 687 CTSDLQR 693
SD +
Sbjct: 73 VQSDFMQ 79
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 45.1 bits (105), Expect = 5e-04
Identities = 19/37 (51%), Positives = 20/37 (54%)
Query: 636 AATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEAC 672
A T+ GGGGG GG GGG G G G G GG C
Sbjct: 68 ATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Score = 34.7 bits (78), Expect = 0.73
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 10/44 (22%)
Query: 642 GGGGGPGGGGGG----------ATDEGGGRGSSSGDGGEACGHP 675
G GGG GGGGGG + GGG G S GG A P
Sbjct: 90 GNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP 133
Score = 33.5 bits (75), Expect = 1.6
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 11/43 (25%)
Query: 642 GGGGGPGGGGGGATDEGGG-----------RGSSSGDGGEACG 673
GGGGG G GGG GGG GS G GG + G
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAG 125
Score = 32.0 bits (71), Expect = 4.8
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 626 GARGHHCHREAATTAIGGGGGPGG---GGG--GATDEGGGRGSSSGDGGEACGHPEPRGG 680
G G +C+ A + G GGG GG GGG +T GSSS +
Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSS 157
Query: 681 PSTPGKC 687
S+ C
Sbjct: 158 SSSSSSC 164
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 45.1 bits (105), Expect = 5e-04
Identities = 19/37 (51%), Positives = 20/37 (54%)
Query: 636 AATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEAC 672
A T+ GGGGG GG GGG G G G G GG C
Sbjct: 68 ATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Score = 34.7 bits (78), Expect = 0.73
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 10/44 (22%)
Query: 642 GGGGGPGGGGGG----------ATDEGGGRGSSSGDGGEACGHP 675
G GGG GGGGGG + GGG G S GG A P
Sbjct: 90 GNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP 133
Score = 33.5 bits (75), Expect = 1.6
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 11/43 (25%)
Query: 642 GGGGGPGGGGGGATDEGGG-----------RGSSSGDGGEACG 673
GGGGG G GGG GGG GS G GG + G
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAG 125
Score = 32.0 bits (71), Expect = 4.8
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 626 GARGHHCHREAATTAIGGGGGPGG---GGG--GATDEGGGRGSSSGDGGEACGHPEPRGG 680
G G +C+ A + G GGG GG GGG +T GSSS +
Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSS 157
Query: 681 PSTPGKC 687
S+ C
Sbjct: 158 SSSSSSC 164
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 45.1 bits (105), Expect = 5e-04
Identities = 19/37 (51%), Positives = 20/37 (54%)
Query: 636 AATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEAC 672
A T+ GGGGG GG GGG G G G G GG C
Sbjct: 68 ATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Score = 34.7 bits (78), Expect = 0.73
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 10/44 (22%)
Query: 642 GGGGGPGGGGGG----------ATDEGGGRGSSSGDGGEACGHP 675
G GGG GGGGGG + GGG G S GG A P
Sbjct: 90 GNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP 133
Score = 33.5 bits (75), Expect = 1.6
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 11/43 (25%)
Query: 642 GGGGGPGGGGGGATDEGGG-----------RGSSSGDGGEACG 673
GGGGG G GGG GGG GS G GG + G
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAG 125
Score = 32.0 bits (71), Expect = 4.8
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 626 GARGHHCHREAATTAIGGGGGPGG---GGG--GATDEGGGRGSSSGDGGEACGHPEPRGG 680
G G +C+ A + G GGG GG GGG +T GSSS +
Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSS 157
Query: 681 PSTPGKC 687
S+ C
Sbjct: 158 SSSSSSC 164
>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
[Homo sapiens]
Length = 864
Score = 45.1 bits (105), Expect = 5e-04
Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 607 GWTGARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSG 666
GWT +R + R+LQ G C AT GG GGGGG T GGG G G
Sbjct: 276 GWT-SRAPSPQAGRSLQEGAEGGQGCSEAWATLGWAAAGGFGGGGGACTAGGGGGGYRGG 334
Query: 667 DGGE 670
D E
Sbjct: 335 DASE 338
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 45.1 bits (105), Expect = 5e-04
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 624 VRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGP 681
+R + +A + G GG GGGGGG GG GS+ G GG A G + GP
Sbjct: 783 LRATNNANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGP 840
Score = 33.1 bits (74), Expect = 2.1
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGG 669
G GGG GGGG T GGG S++G GG
Sbjct: 816 GSGGGGSTGGGGGT-AGGGTQSTAGPGG 842
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 44.7 bits (104), Expect = 7e-04
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 636 AATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRTQ 695
A + GGGG GGGGGG GGG S+G GG G +GG S T+
Sbjct: 374 AGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYSHTTR 433
Query: 696 LLP---PYPLNGEHTQAGTAMSRA 716
P + L+ T G ++ R+
Sbjct: 434 ASPATVQWLLDNYETAEGVSLPRS 457
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 44.7 bits (104), Expect = 7e-04
Identities = 27/66 (40%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 627 ARGHHCHREA-------ATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACG-----H 674
A GHH H A + A GG G GGGG A+ GGG G G GG A G H
Sbjct: 188 AAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALH 247
Query: 675 PEPRGG 680
P G
Sbjct: 248 PHHAAG 253
Score = 36.2 bits (82), Expect = 0.25
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 637 ATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGG 669
A+ GGGGG GGGGGGA GG GG
Sbjct: 222 ASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254
Score = 31.2 bits (69), Expect = 8.1
Identities = 20/62 (32%), Positives = 22/62 (35%)
Query: 619 ARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPR 678
A A G HH H AA G G G A GG G + G G + G
Sbjct: 171 AAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGG 230
Query: 679 GG 680
GG
Sbjct: 231 GG 232
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 44.7 bits (104), Expect = 7e-04
Identities = 27/66 (40%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 627 ARGHHCHREA-------ATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACG-----H 674
A GHH H A + A GG G GGGG A+ GGG G G GG A G H
Sbjct: 188 AAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALH 247
Query: 675 PEPRGG 680
P G
Sbjct: 248 PHHAAG 253
Score = 36.2 bits (82), Expect = 0.25
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 637 ATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGG 669
A+ GGGGG GGGGGGA GG GG
Sbjct: 222 ASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254
Score = 31.2 bits (69), Expect = 8.1
Identities = 20/62 (32%), Positives = 22/62 (35%)
Query: 619 ARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPR 678
A A G HH H AA G G G A GG G + G G + G
Sbjct: 171 AAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGG 230
Query: 679 GG 680
GG
Sbjct: 231 GG 232
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 44.7 bits (104), Expect = 7e-04
Identities = 44/205 (21%), Positives = 65/205 (31%), Gaps = 41/205 (20%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRTQLLPPYP 701
GGGGG GGGGG GGG GG C S L + L +
Sbjct: 3507 GGGGGGSGGGGGGGGGGGG------------------GGSYHCLACESALCGEEALSQHL 3548
Query: 702 LNGEHTQAGTAMSRARREDLPSLRKEESCLLQRATVGLTDGLGDASQLPVAPTGDQPCQA 761
+ H + ++ PSL +C +T + ++ P P+ P A
Sbjct: 3549 ESALHKHRTITRAARNAKEHPSLLPHSACFPDPSTASTSQSAAHSNDSPPPPSAAAPSSA 3608
Query: 762 -----------------------LPLLSSQTSVAERLVEQPQLHPDVRTECESGTTSWES 798
P LSS ++V + P + T+ S + +
Sbjct: 3609 SPHASRKSWPQVVSRASAAKPPSFPPLSSSSTVTSSSCSTSGVQPSMPTDDYSEESDTDL 3668
Query: 799 DDEEQGPTVPADNGPIPSLVGDDTL 823
+ GP P + PS D L
Sbjct: 3669 SQKSDGPASPVEGPKDPSCPKDSGL 3693
Score = 32.3 bits (72), Expect = 3.6
Identities = 36/161 (22%), Positives = 58/161 (36%), Gaps = 30/161 (18%)
Query: 427 KQESEQAGVAKDAKSVASDVPLYKDGEAKTDPA----------GLSSPHLPGTSSAAPDL 476
K+ +E G+A + + + PL PA GL+SP LPG + + L
Sbjct: 3085 KKANEVLGLAAQQQGMFDNTPLQALNLPTAYPALQGIPPVLLPGLNSPSLPGFTPSNTAL 3144
Query: 477 EGPEFPVESVASRIQAEPDNLARASASPDRIPSLPQETVDQEPKDQKRKS--FEQAASAS 534
P+ NL ++ P LP + +P S QA A
Sbjct: 3145 TSPK--------------PNLMGLPSTTVPSPGLPTSGLPNKPSSASLSSPTPAQATMAM 3190
Query: 535 FPEKKPRLEDRQSFRNTIESVHTEKPQPTKEEPKVPPIRIQ 575
P++ P+ + +Q V P P + P P + +Q
Sbjct: 3191 GPQQPPQQQQQQQ----QPQVQQPPPPPAAQPPPTPQLPLQ 3227
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 44.3 bits (103), Expect = 0.001
Identities = 48/152 (31%), Positives = 57/152 (37%), Gaps = 26/152 (17%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGH-----PEPRGGPS-TPGKCTSDLQRTQ 695
GG GG GGGGGG G GRG S G G A G PE R P+ T+ T
Sbjct: 128 GGAGGGGGGGGG----GPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSSTS 183
Query: 696 LLPPYPLNGEHTQAGTAMSRARREDLPSLRKEESC--LLQRATVGLTDGLGDASQLPVAP 753
L + + T+ A RE S E SC LQ T G G + + A
Sbjct: 184 L----SSSSKRTECSVA-----RESQGSSGPEFSCNSFLQEKAAAATGGTGPGAGIGAAT 234
Query: 754 -TG----DQPCQALPLLSSQTSVAERLVEQPQ 780
TG C P+ E+ QPQ
Sbjct: 235 GTGGSSEPSACSDHPIPGCSLKEEEKQHSQPQ 266
Score = 31.6 bits (70), Expect = 6.2
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 640 AIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRTQLLPP 699
A GG GPG G G AT GG S + HP P K S Q+ QL P
Sbjct: 219 AATGGTGPGAGIGAATGTGG-----SSEPSACSDHPIPGCSLKEEEKQHSQPQQQQLDPN 273
Query: 700 YP 701
P
Sbjct: 274 NP 275
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 44.3 bits (103), Expect = 0.001
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGKC 687
GGGGG GG GGG GG GS G G CG+ GG + G C
Sbjct: 21 GGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGY--SGGGGYSGGGC 64
Score = 40.4 bits (93), Expect = 0.013
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPG 685
GGGG GGG GG + GGG G G GG + G + GG + G
Sbjct: 55 GGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSG 98
Score = 36.6 bits (83), Expect = 0.19
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 644 GGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGK 686
GGG GGGGG + GG S SG G C + + P+ P K
Sbjct: 273 GGGSSGGGGGGSSVGG---SGSGKGVPICHQTQQKQAPTWPSK 312
Score = 36.2 bits (82), Expect = 0.25
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSG------DGGEACGHPEPRGGPSTPG 685
GG GG GGG GG+ GG GSS G GG G GG S+ G
Sbjct: 75 GGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGG 124
Score = 35.0 bits (79), Expect = 0.56
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 10/49 (20%)
Query: 642 GGGGGPGGGG----------GGATDEGGGRGSSSGDGGEACGHPEPRGG 680
GGGGG GGGG GG++ G G G G CG GG
Sbjct: 24 GGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGG 72
Score = 35.0 bits (79), Expect = 0.56
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACG 673
GG G GG GG GG G SSG GG + G
Sbjct: 227 GGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSG 258
Score = 34.7 bits (78), Expect = 0.73
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 645 GGPGGGGGGATDEGGGRGSSSG--DGGEACGHPEPRGGPSTPGKCTSDLQRTQLLPPYPL 702
GG GGG G GGG GS G GG CG G S G +S P P
Sbjct: 167 GGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGS--SGGSGSGYVSSQQVTQTSCAPQPS 224
Query: 703 NGEHTQAG 710
G + G
Sbjct: 225 YGGGSSGG 232
Score = 34.7 bits (78), Expect = 0.73
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGG 680
GGGGG G GGG++ G G G GG CG GG
Sbjct: 244 GGGGGSSGCGGGSS--GIGSGCIISGGGSVCGGGSSGGG 280
Score = 34.3 bits (77), Expect = 0.96
Identities = 14/26 (53%), Positives = 14/26 (53%)
Query: 643 GGGGPGGGGGGATDEGGGRGSSSGDG 668
GGGG GGG G GGG S G G
Sbjct: 117 GGGGSSGGGSGCFSSGGGGSSGGGSG 142
Score = 33.9 bits (76), Expect = 1.3
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 626 GARGHHCHREAATTAIGGGGGP----GGGGGGATDEGGGRGSS---SGDGGEACG 673
G+ G C GGG G GGGGGG GGG G S SG GG + G
Sbjct: 45 GSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGG 99
Score = 33.9 bits (76), Expect = 1.3
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 11/42 (26%)
Query: 642 GGGGGPGGGGGGAT----------DEGGGRGS-SSGDGGEAC 672
GGGGG GG GGG+ GGG G SSG GG C
Sbjct: 72 GGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGC 113
Score = 33.5 bits (75), Expect = 1.6
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 642 GGGGGPGGGGGGATDEGGGRG--SSSGDG--GEACGHPEPRGGPSTPG 685
GGGG GGG G + GGG G SS G G G G GG S+ G
Sbjct: 92 GGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGG 139
Score = 33.5 bits (75), Expect = 1.6
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 642 GGGGG---PGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPS 682
GGG G GGGG G GGG S G G + G GG S
Sbjct: 98 GGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGS 141
Score = 33.1 bits (74), Expect = 2.1
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 626 GARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGG 669
G G C + GGG G GGG + GG SSG GG
Sbjct: 107 GGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGG 150
Score = 33.1 bits (74), Expect = 2.1
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Query: 642 GGGGGPGGGGG-----GATDEGGGRGSSSGDGGEACGHP---EPRGGPSTPG 685
GGGG GGG G G GGG G S GG G + GG S+ G
Sbjct: 117 GGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGG 168
Score = 32.3 bits (72), Expect = 3.6
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGKC 687
GGG G G G G GGG S G GG + G GG G C
Sbjct: 39 GGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSG----GGGGGGIGGC 80
Score = 32.0 bits (71), Expect = 4.8
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 626 GARGHHCHREAATTAIGGGGGPG---GGGGGATDEGGGRGSSSGDGGEACG 673
G+ G C + GG G G GGGG + G G GSS G GG G
Sbjct: 28 GSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIG 78
Score = 31.6 bits (70), Expect = 6.2
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 19/65 (29%)
Query: 629 GHHCHREAATTAIGGGGG---PGGGG----------------GGATDEGGGRGSSSGDGG 669
G C + GGG G GGGG GG++ G G SS G GG
Sbjct: 125 GSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGG 184
Query: 670 EACGH 674
CG+
Sbjct: 185 SVCGY 189
Score = 31.2 bits (69), Expect = 8.1
Identities = 21/79 (26%), Positives = 26/79 (32%), Gaps = 13/79 (16%)
Query: 626 GARGHHCHREAATTAIGGGGGPGGGGGGATDE-------------GGGRGSSSGDGGEAC 672
G G C + GGG G G G + + GGG G GG C
Sbjct: 181 GGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGC 240
Query: 673 GHPEPRGGPSTPGKCTSDL 691
GG S G +S +
Sbjct: 241 FSSGGGGGSSGCGGGSSGI 259
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 44.3 bits (103), Expect = 0.001
Identities = 22/44 (50%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACG--------HPEP 677
GGGGGPGGGGG GGG G G GG G HP P
Sbjct: 148 GGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHPHP 191
Score = 40.0 bits (92), Expect = 0.017
Identities = 24/47 (51%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 637 ATTAIGGGG---GPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGG 680
A A GGGG GPGGGGG GGG G G GG G P GG
Sbjct: 134 AGAAAGGGGAHDGPGGGGG----PGGGGGPGGGPGGGGGGGPGGGGG 176
Score = 38.9 bits (89), Expect = 0.039
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 620 RALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRG 679
+AL+ H A A GG G GGGGA D GG G G GG P G
Sbjct: 109 QALEPGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGG-------PGG 161
Query: 680 GPSTPG 685
GP G
Sbjct: 162 GPGGGG 167
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 43.9 bits (102), Expect = 0.001
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 321 RERLADGEFTHEMQVRIRQEMEKEKKVEQWKEKFFEDYYGQKLGLTKEESLQQNVGQEEA 380
+ RL D + + R + E E+E K +Q +E+ + E LQ+ + QE A
Sbjct: 427 QRRLEDMQALRREEERRQAEREQEYKRKQLEEQ------------RQSERLQRQLQQEHA 474
Query: 381 EIKSGLCVPGESVRIQRG------PATRQRDGHFKKRSRPDLRTRARRNLYKKQESEQAG 434
+KS L + ++Q+ P R+ H+ + P A + + ++ E+
Sbjct: 475 YLKS-LQQQQQQQQLQKQQQQQLLPGDRKPLYHYGRGMNP-----ADKPAWAREVEERTR 528
Query: 435 VAKDAKSVASDVPLYKDGEAKTDPAG---LSSPHLPGTSSAAPDLEGPEFPVESVASRIQ 491
+ K S PL K T P +SP PG S P ++ P P E +Q
Sbjct: 529 MNKQQNS-----PLAKSKPGSTGPEPPIPQASPGPPGPLSQTPPMQRPVEPQEGPHKSLQ 583
Query: 492 AEPD-NLARASASPDRIPSLPQET 514
+P NLA AS D P++P T
Sbjct: 584 DQPTRNLAAFPASHDPDPAIPAPT 607
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 43.9 bits (102), Expect = 0.001
Identities = 61/246 (24%), Positives = 86/246 (34%), Gaps = 36/246 (14%)
Query: 490 IQAEPDNLARASASPDRIPSLPQETVD----QEPKDQKRKSFEQAASA-------SFPEK 538
+Q + ARA+ + L +T+D EPK + K ++AASA +
Sbjct: 60 VQYSNERHARAAVLGENGRVLAGQTLDINMAGEPKPDRPKGLKRAASAIYSGYIFDYDYY 119
Query: 539 KPRLEDRQ-SFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRI 597
+ DR +R + V + P K P + + L R VK ++ R
Sbjct: 120 RDDFYDRLFDYRGRLSPVPVPRAVPVKR----PRVTVPLVRR-----VKTNVPVKLFARS 170
Query: 598 IPTTESSCRGWTGARTLADIKARALQVRGARGHHCHREAATTAI----------GGGGGP 647
T SS + + L IK Q++ R A G GGG
Sbjct: 171 TAVTTSSAKIKLKSSELQAIKTELTQIKSNIDALLSRLEQIAAEQKANPDGKKKGDGGGA 230
Query: 648 GGGGGGATDEGGGRGSSSGDGGEACGHPEPR-----GGPSTPGKCTSDLQRTQLLPPYPL 702
GGGGGG GGG G G G P+ G P + D LL
Sbjct: 231 GGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDGDEEGLLTHSEE 290
Query: 703 NGEHTQ 708
EH+Q
Sbjct: 291 ELEHSQ 296
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 43.5 bits (101), Expect = 0.002
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 25/99 (25%)
Query: 625 RGARGHHCHREAATTA----------------IGGGGGPGGG--GGGATDEGGGRGSSSG 666
+G+ G+ C R+ TA GGG GPG G GG + GGG+GS SG
Sbjct: 538 QGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGPGDGHGSGGGKNSGGGKGSGSG 597
Query: 667 DGGEACGHPEPRGGP----STPGKCTSDLQRTQLLPPYP 701
G + G RG S GK T Q+ PP P
Sbjct: 598 KGSDGDGE---RGKSLKKRSYFGKLTQSKQQQMPPPPPP 633
Score = 34.7 bits (78), Expect = 0.73
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 642 GGGGGPGGGGGGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGKCTSDLQRT 694
G GGG G G G++ G SG+G + G G S +C+ D Q T
Sbjct: 500 GSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGT 552
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 43.5 bits (101), Expect = 0.002
Identities = 26/65 (40%), Positives = 28/65 (43%)
Query: 611 ARTLADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGE 670
AR A + A A G A +GGG GGGGG GGGRGS G GG
Sbjct: 138 ARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG 197
Query: 671 ACGHP 675
G P
Sbjct: 198 ERGGP 202
Score = 35.0 bits (79), Expect = 0.56
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 638 TTAIGGGGGPGGGGGGATDEGGGRGSSSGDGGEA 671
++A GGGGG GGGGG + G G G G +A
Sbjct: 173 SSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQA 206
Score = 34.3 bits (77), Expect = 0.96
Identities = 34/120 (28%), Positives = 45/120 (37%), Gaps = 31/120 (25%)
Query: 636 AATTAIGGGGGPGGGG--------GGATDEGGGRGSSSGDGGEACGHPEPRGGPSTPGKC 687
A TTA+ G PG GG GG + GGG G G GG G RGG G
Sbjct: 149 ATTTALDG---PGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGR--GSRRGRGGGERGGPR 203
Query: 688 TSDLQRTQLLPPYPLNGEHTQAGTAMSRARREDLPSLRKEE----SCLLQRATVGLTDGL 743
++R + R RR L LR+ + + L+RA + + L
Sbjct: 204 AQAVRR--------------RLSALRGRGRRRRLKRLRRAQETRGAAALERACASVREEL 249
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 43.5 bits (101), Expect = 0.002
Identities = 71/313 (22%), Positives = 109/313 (34%), Gaps = 28/313 (8%)
Query: 1136 VPLTKDQSHGSLRMGSLHGLGKNSGMVDGSSPSSLRALKEPLLPDSCETGTGLARIEATQ 1195
VPLT S+ S G+ +SG ++ P+S+ ++ L+ G L +A +
Sbjct: 455 VPLTTPSSNHSFHTGN----DSDSGTLERKRPASMAVMEGDLVKKE-SFGVKLMDFQAHR 509
Query: 1196 APGAPQKNCKAVPSFDSLHPVTNPIT---SSRKLEEMDSKEQFSSFSCEDQKEVRAMSQD 1252
G + P+F P T+ T + + S+ + SS + Q
Sbjct: 510 RGGTLNRK-HISPAFQPPLPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILEQG 568
Query: 1253 SNSNAAPGKSPGDLTTSRTPRFSSPNV-ISFGPEQTGRALGDQSNVTGQGKKLFGSGNVA 1311
+ P D ++ P N I+ G Q A G GQ G
Sbjct: 569 PSPGDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHT 628
Query: 1312 ATLQRPRPADPMPLPAEIPPVFPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGSVKNEK 1371
+PA P P PP P G+ S SG Q P +PKP S +
Sbjct: 629 LRRAVKKPAPAPPKPGNPPPGHPGGQ------SSSGTSQHP-PSLSPKPPTRSPSPPTQH 681
Query: 1372 T-----FVGGPLKANAENRKATGHSPLELVGHLEGMPFVMDLPFWKL-PREPGKGLSEPL 1425
T P + +A R ++ SP++ H P P P G P
Sbjct: 682 TGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQG-----PP 736
Query: 1426 EPSSLPSQLSIKQ 1438
P +LPS+ ++Q
Sbjct: 737 NPMALPSEHGLEQ 749
>gi|31657109 zinc finger protein 282 [Homo sapiens]
Length = 671
Score = 43.5 bits (101), Expect = 0.002
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 555 VHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIIPTTESSCRGWTGARTL 614
V P P + +P+ P + QL + QP Q P P + G +R L
Sbjct: 400 VKNPPPAPPQPQPQPQPPQPQL---------QSQPQPQSLP---PIAVAENPGGPPSRGL 447
Query: 615 ADIKARALQVRGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGGRGSSSG 666
D + L G RG + GGGGG GGGGGG + G G G G
Sbjct: 448 LDDGFQVLP--GERGSGEAPPGGDRSTGGGGGDGGGGGGGAEAGTGAGGGCG 497
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,318,217
Number of Sequences: 37866
Number of extensions: 3835553
Number of successful extensions: 27367
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 19215
Number of HSP's gapped (non-prelim): 5107
length of query: 1541
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1426
effective length of database: 13,892,928
effective search space: 19811315328
effective search space used: 19811315328
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.