Search of human proteins with 29558099

Search of human proteins with 29558099

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|29558099 protein phosphatase 1B isoform 3 [Homo sapiens]
         (192 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|29558099 protein phosphatase 1B isoform 3 [Homo sapiens]           375   e-105
gi|4505995 protein phosphatase 1B isoform 1 [Homo sapiens]            375   e-105
gi|29558022 protein phosphatase 1B isoform 2 [Homo sapiens]           186   1e-47
gi|75813620 protein phosphatase 1B isoform 5 [Homo sapiens]           183   9e-47
gi|10337595 protein phosphatase 1A isoform 1 [Homo sapiens]           135   2e-32
gi|193211600 protein phosphatase 1A isoform 3 [Homo sapiens]          135   2e-32
gi|122937199 protein phosphatase 1B-like [Homo sapiens]                72   3e-13
gi|75813618 protein phosphatase 1B isoform 4 [Homo sapiens]            69   2e-12
gi|29557855 protein phosphatase 1A isoform 2 [Homo sapiens]            57   1e-08
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]              36   0.018
gi|157785645 SPEG complex locus [Homo sapiens]                         33   0.11 
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]    33   0.15 
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]    33   0.15 
gi|148747864 JAW1-related protein isoform a [Homo sapiens]             32   0.33 
gi|154091334 JAW1-related protein isoform c [Homo sapiens]             32   0.33 
gi|154091332 JAW1-related protein isoform b [Homo sapiens]             32   0.33 
gi|148728182 JAW1-related protein isoform b [Homo sapiens]             32   0.33 
gi|124244083 F-box protein 10 [Homo sapiens]                           31   0.57 
gi|154689866 hypothetical protein LOC9778 [Homo sapiens]               31   0.57 
gi|154689751 hypothetical protein LOC9778 [Homo sapiens]               31   0.57 
gi|239753364 PREDICTED: hypothetical protein [Homo sapiens]            31   0.74 
gi|239747932 PREDICTED: hypothetical protein [Homo sapiens]            31   0.74 
gi|239741826 PREDICTED: hypothetical protein [Homo sapiens]            31   0.74 
gi|58082049 acyl-CoA synthetase medium-chain family member 2A [H...    30   0.97 
gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]       30   1.3  
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]       30   1.3  
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]        30   1.3  
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]        30   1.3  
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]        30   1.3  
gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]        30   1.3  

>gi|29558099 protein phosphatase 1B isoform 3 [Homo sapiens]
          Length = 192

 Score =  375 bits (964), Expect = e-105
 Identities = 192/192 (100%), Positives = 192/192 (100%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60
           MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI
Sbjct: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60

Query: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNY 120
           PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNY
Sbjct: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNY 120

Query: 121 RQLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSN 180
           RQLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSN
Sbjct: 121 RQLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSN 180

Query: 181 EDAGTKMSGEKI 192
           EDAGTKMSGEKI
Sbjct: 181 EDAGTKMSGEKI 192


>gi|4505995 protein phosphatase 1B isoform 1 [Homo sapiens]
          Length = 479

 Score =  375 bits (964), Expect = e-105
 Identities = 192/192 (100%), Positives = 192/192 (100%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60
           MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI
Sbjct: 288 MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 347

Query: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNY 120
           PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNY
Sbjct: 348 PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNY 407

Query: 121 RQLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSN 180
           RQLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSN
Sbjct: 408 RQLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSN 467

Query: 181 EDAGTKMSGEKI 192
           EDAGTKMSGEKI
Sbjct: 468 EDAGTKMSGEKI 479


>gi|29558022 protein phosphatase 1B isoform 2 [Homo sapiens]
          Length = 387

 Score =  186 bits (472), Expect = 1e-47
 Identities = 92/98 (93%), Positives = 95/98 (96%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60
           MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI
Sbjct: 288 MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 347

Query: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEE 98
           PNLPPGGGLAGKRNVIEAVYSRLNPHRESDG + + E+
Sbjct: 348 PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGGAGDLED 385


>gi|75813620 protein phosphatase 1B isoform 5 [Homo sapiens]
          Length = 380

 Score =  183 bits (464), Expect = 9e-47
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60
           MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI
Sbjct: 288 MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 347

Query: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDG 91
           PNLPPGGGLAGKRNVIEAVYSRLNPHRESDG
Sbjct: 348 PNLPPGGGLAGKRNVIEAVYSRLNPHRESDG 378


>gi|10337595 protein phosphatase 1A isoform 1 [Homo sapiens]
          Length = 382

 Score =  135 bits (340), Expect = 2e-32
 Identities = 65/98 (66%), Positives = 82/98 (83%), Gaps = 1/98 (1%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60
           MS++L+CF NAPKVS EAVKK++ELDK+LE RVEEI++K GE G+PDL HVMR L++ENI
Sbjct: 284 MSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGE-GVPDLVHVMRTLASENI 342

Query: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEE 98
           P+LPPGG LA KRNVIEAVY+RLNP++  D  S   ++
Sbjct: 343 PSLPPGGELASKRNVIEAVYNRLNPYKNDDTDSTSTDD 380


>gi|193211600 protein phosphatase 1A isoform 3 [Homo sapiens]
          Length = 455

 Score =  135 bits (340), Expect = 2e-32
 Identities = 65/98 (66%), Positives = 82/98 (83%), Gaps = 1/98 (1%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60
           MS++L+CF NAPKVS EAVKK++ELDK+LE RVEEI++K GE G+PDL HVMR L++ENI
Sbjct: 357 MSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGE-GVPDLVHVMRTLASENI 415

Query: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEE 98
           P+LPPGG LA KRNVIEAVY+RLNP++  D  S   ++
Sbjct: 416 PSLPPGGELASKRNVIEAVYNRLNPYKNDDTDSTSTDD 453


>gi|122937199 protein phosphatase 1B-like [Homo sapiens]
          Length = 430

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 8/103 (7%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENI 60
           M+ +LVCF  AP+ S+EA++++  LD  L  R+ E+   + +   P L  V R L++E+I
Sbjct: 319 MTCILVCFPGAPRPSEEAIRRELALDAALGCRIAELCASAQKP--PSLNTVFRTLASEDI 376

Query: 61  PNLPPGGGLAGKRNVIEAVYSRLNPHRESDGASDEAEESGSQG 103
           P+LPPGGGL  K  VI  VYS++         S+E  E G  G
Sbjct: 377 PDLPPGGGLDCKATVIAEVYSQICQ------VSEECGEKGQDG 413


>gi|75813618 protein phosphatase 1B isoform 4 [Homo sapiens]
          Length = 327

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 34/34 (100%), Positives = 34/34 (100%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVE 34
           MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVE
Sbjct: 288 MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVE 321


>gi|29557855 protein phosphatase 1A isoform 2 [Homo sapiens]
          Length = 324

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 25/34 (73%), Positives = 31/34 (91%)

Query: 1   MSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVE 34
           MS++L+CF NAPKVS EAVKK++ELDK+LE RVE
Sbjct: 284 MSVILICFPNAPKVSPEAVKKEAELDKYLECRVE 317


>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
          Length = 1505

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 11/127 (8%)

Query: 69  LAGKRNVIEAVYSRLNPHRESDGASDEA-------EESGSQGKLVEALRQMRINHRGNYR 121
           L+ ++N++ A+ S     RE+ G S            +GS+G +   +R          +
Sbjct: 614 LSDEQNIL-ALRSIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIK 672

Query: 122 QLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSNE 181
            +LE+   + R  +V+    PA+P++ + S NSD      +Q++  E E+  A LD + +
Sbjct: 673 SILEQ---AKRELQVQKTAEPAQPSSASGSGNSDDAIRSILQQARREMEAQQAALDPALK 729

Query: 182 DAGTKMS 188
            A    S
Sbjct: 730 QAPLSQS 736


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 21/59 (35%), Positives = 28/59 (47%)

Query: 130 SYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSNEDAGTKMS 188
           S R+ K      PA+PAAT TS +     PV  +++ TE + G     S    AGT  S
Sbjct: 313 SPRVGKRSPPGPPAQPAATPTSPHRRTQEPVLPEDTTTEEKRGKKSKSSGPSLAGTAES 371


>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
          Length = 2454

 Score = 33.1 bits (74), Expect = 0.15
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 1/102 (0%)

Query: 90   DGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKVEGEESPAEPAATA 149
            D    + +ESG   ++ E+  + R   R   +  LEE   SY+  K        E +++ 
Sbjct: 1340 DSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSE 1399

Query: 150  TSSNSDAGNPVTMQESHTESESGLAELDSSNEDAGTKMSGEK 191
              SNS+       +E   E E    E D  N+D+ +   G K
Sbjct: 1400 NKSNSEEEEEEKEEEEEEEEEEEEEEED-ENDDSKSPGKGRK 1440


>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
          Length = 2492

 Score = 33.1 bits (74), Expect = 0.15
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 1/102 (0%)

Query: 90   DGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKVEGEESPAEPAATA 149
            D    + +ESG   ++ E+  + R   R   +  LEE   SY+  K        E +++ 
Sbjct: 1378 DSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSE 1437

Query: 150  TSSNSDAGNPVTMQESHTESESGLAELDSSNEDAGTKMSGEK 191
              SNS+       +E   E E    E D  N+D+ +   G K
Sbjct: 1438 NKSNSEEEEEEKEEEEEEEEEEEEEEED-ENDDSKSPGKGRK 1478


>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
          Length = 903

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 21/137 (15%)

Query: 17  EAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRNVI 76
           EA +++  L   L   +EE   KSG + MP+++ V  +L    +    PG         +
Sbjct: 467 EAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDV--LLRKLRVHRSLPGSAPPLTEKEV 524

Query: 77  EAVYSRLNPHRESDGASDEA--EESGSQGKLVEALRQMRI-----------------NHR 117
           E V+ +L+    +D  + E+   ++  +  L E   +  +                  HR
Sbjct: 525 ENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEKELENFKASITSSASLWHHCEHR 584

Query: 118 GNYRQLLEEMLTSYRLA 134
             Y++LLE++   +RLA
Sbjct: 585 ETYQKLLEDIAVLHRLA 601


>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
          Length = 597

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 21/137 (15%)

Query: 17  EAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRNVI 76
           EA +++  L   L   +EE   KSG + MP+++ V  +L    +    PG         +
Sbjct: 161 EAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDV--LLRKLRVHRSLPGSAPPLTEKEV 218

Query: 77  EAVYSRLNPHRESDGASDEA--EESGSQGKLVEALRQMRI-----------------NHR 117
           E V+ +L+    +D  + E+   ++  +  L E   +  +                  HR
Sbjct: 219 ENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEKELENFKASITSSASLWHHCEHR 278

Query: 118 GNYRQLLEEMLTSYRLA 134
             Y++LLE++   +RLA
Sbjct: 279 ETYQKLLEDIAVLHRLA 295


>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 21/137 (15%)

Query: 17  EAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRNVI 76
           EA +++  L   L   +EE   KSG + MP+++ V  +L    +    PG         +
Sbjct: 385 EAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDV--LLRKLRVHRSLPGSAPPLTEKEV 442

Query: 77  EAVYSRLNPHRESDGASDEA--EESGSQGKLVEALRQMRI-----------------NHR 117
           E V+ +L+    +D  + E+   ++  +  L E   +  +                  HR
Sbjct: 443 ENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEKELENFKASITSSASLWHHCEHR 502

Query: 118 GNYRQLLEEMLTSYRLA 134
             Y++LLE++   +RLA
Sbjct: 503 ETYQKLLEDIAVLHRLA 519


>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 21/137 (15%)

Query: 17  EAVKKDSELDKHLESRVEEIMEKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRNVI 76
           EA +++  L   L   +EE   KSG + MP+++ V  +L    +    PG         +
Sbjct: 385 EAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDV--LLRKLRVHRSLPGSAPPLTEKEV 442

Query: 77  EAVYSRLNPHRESDGASDEA--EESGSQGKLVEALRQMRI-----------------NHR 117
           E V+ +L+    +D  + E+   ++  +  L E   +  +                  HR
Sbjct: 443 ENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEKELENFKASITSSASLWHHCEHR 502

Query: 118 GNYRQLLEEMLTSYRLA 134
             Y++LLE++   +RLA
Sbjct: 503 ETYQKLLEDIAVLHRLA 519


>gi|124244083 F-box protein 10 [Homo sapiens]
          Length = 956

 Score = 31.2 bits (69), Expect = 0.57
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 136 VEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGLAELDSSNEDAGTKMSGE 190
           +EG +SP  PA+++    S AG+    QE+   S+         + D G   SGE
Sbjct: 313 IEGSQSPTSPASSSPKPGSKAGS----QEAEVGSDGERVAQTPDSSDGGLSPSGE 363


>gi|154689866 hypothetical protein LOC9778 [Homo sapiens]
          Length = 1395

 Score = 31.2 bits (69), Expect = 0.57
 Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 72  KRNVIEAVYSRLNPHRESDGASDE-AEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTS 130
           K+ +      ++ P   S G+S+  +  SG+QG+L  +++ +++ H+    +  +     
Sbjct: 272 KKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQ 331

Query: 131 YRLAKVEGEESPAEPAATATSSNSDAGN 158
            RL+   GE++      T +SS+S +G+
Sbjct: 332 SRLSLKHGEKAERN-IHTGSSSSSSSGS 358


>gi|154689751 hypothetical protein LOC9778 [Homo sapiens]
          Length = 1395

 Score = 31.2 bits (69), Expect = 0.57
 Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 72  KRNVIEAVYSRLNPHRESDGASDE-AEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTS 130
           K+ +      ++ P   S G+S+  +  SG+QG+L  +++ +++ H+    +  +     
Sbjct: 272 KKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQ 331

Query: 131 YRLAKVEGEESPAEPAATATSSNSDAGN 158
            RL+   GE++      T +SS+S +G+
Sbjct: 332 SRLSLKHGEKAERN-IHTGSSSSSSSGS 358


>gi|239753364 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 30.8 bits (68), Expect = 0.74
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 77  EAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKV 136
           E  Y  L+P R    A   +E  G     +E  ++  + H G     LE+   ++R A  
Sbjct: 65  EECYQALSPRRALGAAFGSSEALGDHFCGLEKAQETSLGHLGLRHSSLEQSSQTWRSA-- 122

Query: 137 EGEESPAEPAATATSSNSDAGNPVTMQESHTES 169
                 +  +AT +S+ S A    T   S T S
Sbjct: 123 --PSKTSTASATTSSAKSAASTKATTTASSTSS 153


>gi|239747932 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 30.8 bits (68), Expect = 0.74
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 77  EAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKV 136
           E  Y  L+P R    A   +E  G     +E  ++  + H G     LE+   ++R A  
Sbjct: 65  EECYQALSPRRALGAAFGSSEALGDHFCGLEKAQETSLGHLGLRHSSLEQSSQTWRSA-- 122

Query: 137 EGEESPAEPAATATSSNSDAGNPVTMQESHTES 169
                 +  +AT +S+ S A    T   S T S
Sbjct: 123 --PSKTSTASATTSSAKSAASTKATTTASSTSS 153


>gi|239741826 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 30.8 bits (68), Expect = 0.74
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 77  EAVYSRLNPHRESDGASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKV 136
           E  Y  L+P R    A   +E  G     +E  ++  + H G     LE+   ++R A  
Sbjct: 65  EECYQALSPRRALGAAFGSSEALGDHFCGLEKAQETSLGHLGLRHSSLEQSSQTWRSA-- 122

Query: 137 EGEESPAEPAATATSSNSDAGNPVTMQESHTES 169
                 +  +AT +S+ S A    T   S T S
Sbjct: 123 --PSKTSTASATTSSAKSAASTKATTTASSTSS 153


>gi|58082049 acyl-CoA synthetase medium-chain family member 2A [Homo
           sapiens]
          Length = 577

 Score = 30.4 bits (67), Expect = 0.97
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 120 YRQLLEEMLTSYRLAKVEGEESPAEPAATATSSNSDAGNPVTMQESHTESESGL 173
           YR LL++ L+SY+   ++   +  E     T  N  A   + ++ES+ ++E+GL
Sbjct: 315 YRMLLQQDLSSYKFPHLQNCVTVGESLLPETLENWRAQTGLDIRESYGQTETGL 368


>gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
          Length = 397

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 125 EEMLTSYRLAKVEGEESPAEPAA-----TATSSNSDA---GNPVTMQESHTESESGLAEL 176
           E  L  Y  A+   E+SPA+ +A     TAT ++  A   G P T    +TE++S    L
Sbjct: 60  EHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL 119

Query: 177 DSSN 180
             SN
Sbjct: 120 HVSN 123


>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
          Length = 370

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 125 EEMLTSYRLAKVEGEESPAEPAA-----TATSSNSDA---GNPVTMQESHTESESGLAEL 176
           E  L  Y  A+   E+SPA+ +A     TAT ++  A   G P T    +TE++S    L
Sbjct: 60  EHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL 119

Query: 177 DSSN 180
             SN
Sbjct: 120 HVSN 123


>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
          Length = 395

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 125 EEMLTSYRLAKVEGEESPAEPAA-----TATSSNSDA---GNPVTMQESHTESESGLAEL 176
           E  L  Y  A+   E+SPA+ +A     TAT ++  A   G P T    +TE++S    L
Sbjct: 80  EHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL 139

Query: 177 DSSN 180
             SN
Sbjct: 140 HVSN 143


>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
          Length = 392

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 125 EEMLTSYRLAKVEGEESPAEPAA-----TATSSNSDA---GNPVTMQESHTESESGLAEL 176
           E  L  Y  A+   E+SPA+ +A     TAT ++  A   G P T    +TE++S    L
Sbjct: 80  EHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL 139

Query: 177 DSSN 180
             SN
Sbjct: 140 HVSN 143


>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
          Length = 418

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 125 EEMLTSYRLAKVEGEESPAEPAA-----TATSSNSDA---GNPVTMQESHTESESGLAEL 176
           E  L  Y  A+   E+SPA+ +A     TAT ++  A   G P T    +TE++S    L
Sbjct: 80  EHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL 139

Query: 177 DSSN 180
             SN
Sbjct: 140 HVSN 143


>gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
          Length = 397

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 125 EEMLTSYRLAKVEGEESPAEPAA-----TATSSNSDA---GNPVTMQESHTESESGLAEL 176
           E  L  Y  A+   E+SPA+ +A     TAT ++  A   G P T    +TE++S    L
Sbjct: 60  EHTLNLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRL 119

Query: 177 DSSN 180
             SN
Sbjct: 120 HVSN 123


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.304    0.123    0.327 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,500,529
Number of Sequences: 37866
Number of extensions: 337805
Number of successful extensions: 1180
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1132
Number of HSP's gapped (non-prelim): 92
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.