Guide to the Human Genome
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Name: PPM1B Sequence: fasta or formatted (327aa) NCBI GI: 75813618
Description:

protein phosphatase 1B isoform 4

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [387aa] protein phosphatase 1B isoform 2
alt prot [192aa] protein phosphatase 1B isoform 3
alt prot [479aa] protein phosphatase 1B isoform 1
alt prot [380aa] protein phosphatase 1B isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         21           2
 C cysteine            3.1         10           1
 D aspartate           7.0         23           2
 E glutamate           8.3         27           2
 F phenylalanine       3.4         11           2
 G glycine             8.6         28           2
 H histidine           3.4         11           1
 I isoleucine          4.3         14           2
 K lysine              5.5         18           2
 L leucine             7.0         23           2
 M methionine          2.8          9           1
 N asparagine          5.8         19           1
 P proline             2.8          9           1
 Q glutamine           1.8          6           1
 R arginine            5.5         18           1
 S serine              8.3         27           2
 T threonine           3.4         11           2
 V valine              8.6         28           2
 W tryptophan          1.2          4           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1B isoform 4 
PPM1B                 0.980   protein phosphatase 1B isoform 5 
PPM1B                 0.980   protein phosphatase 1B isoform 2 
PPM1B                 0.980   protein phosphatase 1B isoform 1 
PPM1A                 0.761   protein phosphatase 1A isoform 2 
PPM1A                 0.758   protein phosphatase 1A isoform 1 
PPM1A                 0.758   protein phosphatase 1A isoform 3 
FLJ40125              0.367   protein phosphatase 1B-like 
PPM1G                 0.156   protein phosphatase 1G 
PPM1G                 0.156   protein phosphatase 1G 
PPM1L                 0.156   protein phosphatase 1 (formerly 2C)-like 
ILKAP                 0.136   integrin-linked kinase-associated protein phosphatas...
PPM1E                 0.120   protein phosphatase 1E 
PPM1K                 0.117   protein phosphatase 1K (PP2C domain containing) [Ho...
PPM1F                 0.112   protein phosphatase 1F 
PPM1D                 0.094   protein phosphatase 1D 
PPM1B                 0.068   protein phosphatase 1B isoform 3 
PPM1H                 0.052   protein phosphatase 1H (PP2C domain containing) [Ho...
PDP2                  0.049   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
PPM1M                 0.046   protein phosphatase 1M isoform b 
PPM1M                 0.046   protein phosphatase 1M isoform a 
PPM1J                 0.043   protein phosphatase 1J (PP2C domain containing) [Hom...
PDP1                  0.039   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.039   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.039   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.039   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.039   pyruvate dehyrogenase phosphatase catalytic subunit...
PHLPP1                0.035   PH domain and leucine rich repeat protein phosphatas...
PHLPP2                0.011   PH domain and leucine rich repeat protein phosphatas...
AGBL4                 0.009   ATP/GTP binding protein-like 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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