Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 122937386
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122937386 protein phosphatase 1, regulatory (inhibitor)
subunit 1C [Homo sapiens]
(109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122937386 protein phosphatase 1, regulatory (inhibitor) subun... 224 9e-60
gi|155030238 protein phosphatase 1, regulatory (inhibitor) subun... 87 2e-18
gi|21735492 protein phosphatase 1, regulatory (inhibitor) subuni... 77 4e-15
gi|239756593 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 38 0.002
gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 38 0.002
gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 38 0.002
gi|31415880 protein phosphatase 1, regulatory (inhibitor) subuni... 35 0.010
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 35 0.010
gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 35 0.017
gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 35 0.017
gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 35 0.017
gi|116534937 interferon-induced protein with tetratricopeptide r... 34 0.022
gi|239754340 PREDICTED: similar to Putative UPF0607 protein ENSP... 33 0.049
gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 33 0.049
gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 33 0.049
gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 33 0.049
gi|169172420 PREDICTED: UPF0607 protein ENSP00000382826-like [Ho... 32 0.14
gi|55956788 nucleolin [Homo sapiens] 31 0.19
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 31 0.19
gi|169173209 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
gi|169172709 PREDICTED: UPF0607 protein ENSP00000382826-like [Ho... 31 0.19
gi|158341646 hypothetical protein LOC729830 [Homo sapiens] 31 0.19
gi|110349719 titin isoform N2-A [Homo sapiens] 31 0.24
gi|169168723 PREDICTED: similar to Putative UPF0607 protein ENSP... 31 0.24
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho... 30 0.32
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 30 0.42
gi|169169422 PREDICTED: similar to Putative UPF0607 protein ENSP... 30 0.42
gi|16579828 zinc finger protein 91 [Homo sapiens] 29 0.93
gi|239752750 PREDICTED: similar to protein phosphatase 2, cataly... 28 1.2
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 28 1.2
>gi|122937386 protein phosphatase 1, regulatory (inhibitor) subunit
1C [Homo sapiens]
Length = 109
Score = 224 bits (572), Expect = 9e-60
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MEPNSPKKIQFAVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
MEPNSPKKIQFAVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE
Sbjct: 1 MEPNSPKKIQFAVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
Query: 61 LQNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEGTNEREEQRDH 109
LQNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEGTNEREEQRDH
Sbjct: 61 LQNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEGTNEREEQRDH 109
>gi|155030238 protein phosphatase 1, regulatory (inhibitor) subunit
1A [Homo sapiens]
Length = 171
Score = 87.4 bits (215), Expect = 2e-18
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 7/106 (6%)
Query: 2 EPNSPKKIQFAVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGEL 61
+ NSP+KIQF VP+ + + PEAAEQIR+RRPTPA+LV+ ++ + PEID+ R PN +
Sbjct: 3 QDNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPATLVLTSDQSSPEIDEDRIPNPHLKS 62
Query: 62 QNA-SPKQRKQSVYTPPTIKG----VKHLKGQNESAFPEEEEGTNE 102
A SP+QRK+ PT+K V+H GQ + EE EG E
Sbjct: 63 TLAMSPRQRKKMTRITPTMKELQMMVEHHLGQQQQG--EEPEGAAE 106
>gi|21735492 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 1 [Homo sapiens]
Length = 204
Score = 76.6 bits (187), Expect = 4e-15
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1 MEPNSPKKIQFAVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
M+P KKIQF+VP SQ+ P E IR+RRPTPA L L+EH+ PE + GE
Sbjct: 1 MDPKDRKKIQFSVPAPPSQLDPRQVEMIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGE 60
Query: 61 LQNASPKQRKQSVYTPPTIKGVKH--------LKGQNESAFPEEEEGTNEREE 105
+ K+ YTPP++K V+ + NE+ EEE+ E E
Sbjct: 61 GHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRE 113
>gi|239756593 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P K +P F Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 123 PRLRGKFNLQLPSFDEQVIPARLPKTEMRAEEPKEATEVKDQVETQGQEDNKRGPCSNGE 182
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNES 91
+ S Q S Y P T++G HLK E+
Sbjct: 183 AASTSRPLETQGNLTSSWYNPRTLEGNVHLKSLTEN 218
>gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P K +P F Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 123 PRLRGKFNLQLPSFDEQVIPARLPKTEMRAEEPKEATEVKDQVETQGQEDNKRGPCSNGE 182
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNES 91
+ S Q S Y P T++G HLK E+
Sbjct: 183 AASTSRPLETQGNLTSSWYNPRTLEGNVHLKSLTEN 218
>gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P K +P F Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 123 PRLRGKFNLQLPSFDEQVIPARLPKTEMRAEEPKEATEVKDQVETQGQEDNKRGPCSNGE 182
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNES 91
+ S Q S Y P T++G HLK E+
Sbjct: 183 AASTSRPLETQGNLTSSWYNPRTLEGNVHLKSLTEN 218
>gi|31415880 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 2 [Homo sapiens]
Length = 168
Score = 35.4 bits (80), Expect = 0.010
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 41 LNEHNPPEIDDKRGPNTQGELQNASPKQRKQSVYTPPTIKGVKH--------LKGQNESA 92
L+EH+ PE + GE + K+ YTPP++K V+ + NE+
Sbjct: 5 LSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQ 64
Query: 93 FPEEEEGTNEREE 105
EEE+ E E
Sbjct: 65 ASEEEDELGELRE 77
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 3 PNSPKKIQFAVPVF-QSQIAPEAAEQIRKRRPTPAS---LVILNEHNPPEIDDKRGPNTQ 58
P+ PK+ +P ++ +P AA R++ TP S L + +I K P +
Sbjct: 112 PSMPKRTAKMIPTTTKNNYSPTAAGTERRKEDTPTSSRTLTYYTSTSSRQIVKKYTPTPR 171
Query: 59 GELQNASPKQRKQSVYTPPTIKG 81
GE+++ SP Q ++ V P+ +G
Sbjct: 172 GEMKSYSPTQVREKVKYTPSPRG 194
>gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 34.7 bits (78), Expect = 0.017
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P+ K +P Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 49 PHLRGKFNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQEQEDNKRGPCSNGE 108
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
+ S Q S Y P ++G HLK E
Sbjct: 109 AASTSRPLETQGNLTSSWYNPRPLEGNVHLKSLTE 143
>gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 34.7 bits (78), Expect = 0.017
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P+ K +P Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 49 PHLRGKFNLQLPSLDEQVIPARLPKTEVRAEEPKEATEVKDQVETQEQEDNKRGPCSNGE 108
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
+ S Q S Y P ++G HLK E
Sbjct: 109 AASTSRPLETQGNLTSSWYNPRPLEGNVHLKSLTE 143
>gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 34.7 bits (78), Expect = 0.017
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P+ K +P Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 49 PHLRGKFNLQLPSLDEQVIPARLPKTEVRAEEPKEATEVKDQVETQEQEDNKRGPCSNGE 108
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
+ S Q S Y P ++G HLK E
Sbjct: 109 AASTSRPLETQGNLTSSWYNPRPLEGNVHLKSLTE 143
>gi|116534937 interferon-induced protein with tetratricopeptide
repeats 1 isoform 2 [Homo sapiens]
Length = 478
Score = 34.3 bits (77), Expect = 0.022
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 49 IDDKRGPNTQGE-LQNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEGTNEREEQR 107
IDD P+ + L K SV + VKHLKGQNE A +E N +E+
Sbjct: 27 IDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYVKHLKGQNEEALKSLKEAENLMQEEH 86
Query: 108 DH 109
D+
Sbjct: 87 DN 88
>gi|239754340 PREDICTED: similar to Putative UPF0607 protein
ENSP00000383144 [Homo sapiens]
Length = 341
Score = 33.1 bits (74), Expect = 0.049
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 8 KIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGELQNAS 65
K F +P Q+ P ++R P A+ V + D+KRGP + GE S
Sbjct: 54 KFNFQLPSLDEQVIPARLPKTEVRAEEPKEATKVKYQVETQGQKDNKRGPCSNGEAAFTS 113
Query: 66 PKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
Q S Y P ++G HL E
Sbjct: 114 GPLETQGNLTSSWYNPRPLEGNVHLNSLAE 143
>gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 33.1 bits (74), Expect = 0.049
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P+ K +P Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 49 PHLRGKFNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQGQEDNKRGPCSNGE 108
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLK 86
+ S Q S Y P ++G HLK
Sbjct: 109 AASTSSLLETQGNLTSSWYNPRPLEGNVHLK 139
>gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 33.1 bits (74), Expect = 0.049
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P+ K +P Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 49 PHLRGKFNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQGQEDNKRGPCSNGE 108
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLK 86
+ S Q S Y P ++G HLK
Sbjct: 109 AASTSSLLETQGNLTSSWYNPRPLEGNVHLK 139
>gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 33.1 bits (74), Expect = 0.049
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P+ K +P Q+ P ++R P A+ V + D+KRGP + GE
Sbjct: 49 PHLRGKFNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQGQEDNKRGPCSNGE 108
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLK 86
+ S Q S Y P ++G HLK
Sbjct: 109 AASTSSLLETQGNLTSSWYNPRPLEGNVHLK 139
>gi|169172420 PREDICTED: UPF0607 protein ENSP00000382826-like [Homo
sapiens]
Length = 352
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAA--EQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P K +P Q+ P ++R P A+ V + D+K GP + GE
Sbjct: 124 PRLRGKFNLQLPSLDEQVIPARLLKMEVRAEEPKEATEVKDQVETQGQEDNKMGPCSNGE 183
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNES 91
+ S Q S Y P ++G HLK E+
Sbjct: 184 AASTSRPLETQGNLTSSWYNPRPLEGNVHLKSLTEN 219
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 31.2 bits (69), Expect = 0.19
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 7 KKIQFAVPVFQSQIAP--EAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGELQNA 64
KK+ A P ++ + P +AA K+ TPA V K+G T G+ A
Sbjct: 70 KKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTT--------PGKKGA-TPGKALVA 120
Query: 65 SPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEGTNEREEQRD 108
+P ++ ++ KG K+ K + EEE+ +E +E+ D
Sbjct: 121 TPGKKGAAI----PAKGAKNGKNAKKEDSDEEEDDDSEEDEEDD 160
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 31.2 bits (69), Expect = 0.19
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 9 IQFAVPVFQSQI-APEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGELQNASPK 67
+ F P+F + +PEA Q R P+S + PP++ KRG Q
Sbjct: 998 VAFKKPIFTHPMPSPEAVIQTRCPAHAPSSSFTVMALGPPKVSPKRGVPKTSPRQTLGTP 1057
Query: 68 QRKQSVYTP 76
QR + TP
Sbjct: 1058 QRDIGLQTP 1066
>gi|169173209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 31.2 bits (69), Expect = 0.19
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAA--EQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P K +P Q+ P ++R P A+ V + D+K GP + GE
Sbjct: 124 PRLRGKFNLQLPSLDEQVIPARLLKMEVRAEEPKEATEVKDQVETQGQEDNKMGPCSNGE 183
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
+ S Q S Y P ++G HLK E
Sbjct: 184 AASTSRPLETQGNLTSSWYNPRPLEGNVHLKSLTE 218
>gi|169172709 PREDICTED: UPF0607 protein ENSP00000382826-like [Homo
sapiens]
Length = 352
Score = 31.2 bits (69), Expect = 0.19
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 3 PNSPKKIQFAVPVFQSQIAPEAA--EQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
P K +P Q+ P ++R P A+ V + D+K GP + GE
Sbjct: 124 PRLRGKFNLQLPSLDEQVIPARLLKMEVRAEEPKEATEVKDQVETQGQEDNKMGPCSNGE 183
Query: 61 LQNASPKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
+ S Q S Y P ++G HLK E
Sbjct: 184 AASTSRPLETQGNLTSSWYNPRPLEGNVHLKSLTE 218
>gi|158341646 hypothetical protein LOC729830 [Homo sapiens]
Length = 1040
Score = 31.2 bits (69), Expect = 0.19
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 2 EPNSPKKIQF--AVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQ- 58
EP PK+ + A P S++A A E T A PE ++ Q
Sbjct: 708 EPKEPKQEREPEAAPESNSELASPAPEAEHSSNLTAAH---------PESEELIAQYDQI 758
Query: 59 -GELQNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEGTNEREEQRD 108
EL + + +Q+ TP + K +G+ ES +E+EG E E++ D
Sbjct: 759 IKELDSGAEGLMEQNYPTPDPLLLTKEEEGKEESKGEKEKEGKKELEDEED 809
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.8 bits (68), Expect = 0.24
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 5 SPKKIQFA---VPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGEL 61
+PKK++ VP ++ PE +++PTP + E PP++ KR P +
Sbjct: 10049 APKKVEAPPAKVPEVPKKLIPE------EKKPTPVPKKV--EAPPPKVPKKREPVP---V 10097
Query: 62 QNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEGTNEREE 105
A P++ + V I + + + E PEEEE E EE
Sbjct: 10098 PVALPQE--EEVLFEEEIVPEEEVLPEEEEVLPEEEEVLPEEEE 10139
>gi|169168723 PREDICTED: similar to Putative UPF0607 protein
ENSP00000383144 [Homo sapiens]
Length = 341
Score = 30.8 bits (68), Expect = 0.24
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 8 KIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGELQNAS 65
K +P Q+ P ++R P A+ V + D+KRGP + GE S
Sbjct: 54 KFNLQLPSLDEQVIPARLPKTEVRAEEPKEATKVKYQVETQGQKDNKRGPCSNGEAAFTS 113
Query: 66 PKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
Q S Y P ++G HL E
Sbjct: 114 GPLETQGNLTSSWYNPRPLEGNVHLNSLAE 143
>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
sapiens]
Length = 520
Score = 30.4 bits (67), Expect = 0.32
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 6 PKKIQFAVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGEL 61
P + A+P S P A +R R +L+I EH+PPE + P + GEL
Sbjct: 402 PSATKMALPSQHSLQEPYTASVVRSR-----NLLIYEEHSPPE--ESSSPGSAGEL 450
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 30.0 bits (66), Expect = 0.42
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 22 PEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGELQNASPKQRKQSVYTPPT 78
P +A + +RRP PA PP+ D+ G ++ G + R S+ TPPT
Sbjct: 500 PSSATKQVQRRPPPAG-PRSERGEPPKSGDRSGYSSPGSPGTPGSRSRTPSLPTPPT 555
>gi|169169422 PREDICTED: similar to Putative UPF0607 protein
ENSP00000383144 [Homo sapiens]
Length = 341
Score = 30.0 bits (66), Expect = 0.42
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 8 KIQFAVPVFQSQIAPEAAE--QIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGELQNAS 65
K +P Q+ P ++R P A+ V + D+KRGP + GE S
Sbjct: 54 KFNLQLPSLVEQVIPARLPKTEVRAEEPKEATKVKYQVETQGQKDNKRGPCSNGEAAFTS 113
Query: 66 PKQRKQ-----SVYTPPTIKGVKHLKGQNE 90
Q S Y P ++G HL E
Sbjct: 114 GPLETQGNLTSSWYNPRPLEGNVHLNSLAE 143
>gi|16579828 zinc finger protein 91 [Homo sapiens]
Length = 570
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 39 VILNEHNPPEIDDKRGPNTQGELQNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEE 98
++++E P DD R + L+ +PK R++S K K +K + E EEE
Sbjct: 217 MLISEEEIPFKDDPRDETYKPHLERETPKPRRKSGKVKEE-KEKKEIKVEVEVEVKEEEN 275
Query: 99 GTNEREE 105
E EE
Sbjct: 276 EIREDEE 282
>gi|239752750 PREDICTED: similar to protein phosphatase 2,
catalytic subunit, alpha [Homo sapiens]
Length = 384
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 17 QSQIAPEAAEQIRKRRPTPASL--VILNEHNPPEIDDKRGPNTQGELQNASPKQR 69
++Q+AP R+ R P SL L + P + D+ GP T+ E + AS + R
Sbjct: 28 RAQLAP--LTPARENRSPPGSLESAYLRPASDPPVSDRAGPATRAEPRTASEQPR 80
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 40 ILNEHNPPEIDDKRGPNTQGELQNASPKQRKQSVYTPPTIKGVKHLKGQNESAFPEEEEG 99
+L + + K + +G +Q Q ++ P++ +++KGQ E EEE
Sbjct: 852 VLGQQKKSPLHAKMDESKEGSIQGLEEMQVEREGSLNPSLNE-ENVKGQGEKKEESEEED 910
Query: 100 TNEREEQRD 108
E EE+ +
Sbjct: 911 EKEEEEEEE 919
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,400,143
Number of Sequences: 37866
Number of extensions: 265724
Number of successful extensions: 745
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 706
Number of HSP's gapped (non-prelim): 96
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.