Guide to the Human Genome
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Search of human proteins with 29294643

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
         (97 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ...   209   3e-55
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]   181   9e-47
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]               48   1e-06
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s...    48   2e-06
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s...    48   2e-06
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ...    48   2e-06
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]       48   2e-06
gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho...    43   6e-05
gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho...    43   6e-05
gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho...    43   6e-05
gi|9966907 ARS component B precursor [Homo sapiens]                    41   2e-04
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    40   4e-04
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    40   4e-04
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    40   4e-04
gi|30794264 glycosylphosphatidylinositol anchored high density l...    37   0.003
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]      36   0.008
gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]        36   0.008
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]     35   0.017
gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]             32   0.083
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]             32   0.083
gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]             32   0.083
gi|53829381 plasminogen activator, urokinase receptor isoform 3 ...    30   0.41 
gi|53829379 plasminogen activator, urokinase receptor isoform 2 ...    30   0.41 
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p...    30   0.41 
gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens]    30   0.41 
gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens]    30   0.41 
gi|221554530 prostate and testis expressed 4 [Homo sapiens]            29   0.92 
gi|194097377 ankyrin repeat domain 33 isoform 1 [Homo sapiens]         28   1.2  
gi|194097375 ankyrin repeat domain 33 isoform 2 [Homo sapiens]         28   1.2  
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s...    28   2.1  

>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
          sapiens]
          Length = 97

 Score =  209 bits (533), Expect = 3e-55
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTED 60
          MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTED
Sbjct: 1  MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTED 60

Query: 61 LPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
          LPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD
Sbjct: 61 LPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97


>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
          Length = 131

 Score =  181 bits (460), Expect = 9e-47
 Identities = 80/90 (88%), Positives = 86/90 (95%)

Query: 8   LLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM 67
           ++A  ++ + +AAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM
Sbjct: 42  MVAYCMTTRTSAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM 101

Query: 68  CHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
           CHIGCPDIPSLGLGPYVSIACCQTSLCNHD
Sbjct: 102 CHIGCPDIPSLGLGPYVSIACCQTSLCNHD 131


>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
          Length = 125

 Score = 48.1 bits (113), Expect = 1e-06
 Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 6/100 (6%)

Query: 4   GTGL-LLAAVLSLQLAAAEAIWCHQC---TGFGGCSHGSRCLRDSTHCVTT--ATRVLSN 57
           GT L LLA VL+     A A+ C+ C   TG   C   + C  + T C TT  +  ++  
Sbjct: 3   GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62

Query: 58  TEDLPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
            +    VTK C   C      G+G  + ++CC T LCN D
Sbjct: 63  FQGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVD 102


>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
          sapiens]
          Length = 190

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
          LLLAAV +   A A+A+ CH C G   C     C     +CV T     + +    LV K
Sbjct: 8  LLLAAVCA---ALAQALHCHVCCGHEHCESLVECAPTDKYCVITR----ATSPGGILVMK 60

Query: 67 MCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
           C   CP+         +S++CCQ S CN
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCN 89


>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
          sapiens]
          Length = 190

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
          LLLAAV +   A A+A+ CH C G   C     C     +CV T     + +    LV K
Sbjct: 8  LLLAAVCA---ALAQALHCHVCCGHEHCESLVECAPTDKYCVITR----ATSPGGILVMK 60

Query: 67 MCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
           C   CP+         +S++CCQ S CN
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCN 89


>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
          sapiens]
          Length = 190

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
          LLLAAV +   A A+A+ CH C G   C     C     +CV T     + +    LV K
Sbjct: 8  LLLAAVCA---ALAQALHCHVCCGHEHCESLVECAPTDKYCVITR----ATSPGGILVMK 60

Query: 67 MCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
           C   CP+         +S++CCQ S CN
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCN 89


>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
          Length = 128

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 37/98 (37%), Positives = 40/98 (40%), Gaps = 14/98 (14%)

Query: 5  TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDL--P 62
          T LLL A L++    A  + CH CT    C H   C   S  C TT T      E L   
Sbjct: 3  TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNT-----VEPLRGN 57

Query: 63 LVTKMCHIGCPDIPSLGLGPYV-----SIACCQTSLCN 95
          LV K C   C   PS  L   V     S  CCQ  LCN
Sbjct: 58 LVKKDCAESC--TPSYTLQGQVSSGTSSTQCCQEDLCN 93


>gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo
           sapiens]
          Length = 161

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 4   GTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDL 61
           G GL L AVL L  A A  +WC  CT     SH    +C    T C +      S++   
Sbjct: 29  GLGLALLAVL-LCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKD 87

Query: 62  PLVTKMCHIGCPDIPSLGLGPY-----------VSIACCQTSLCN 95
             V KMC   C  +       Y           V + CC+  LCN
Sbjct: 88  HSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 132


>gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo
           sapiens]
          Length = 140

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 4   GTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDL 61
           G GL L AVL L  A A  +WC  CT     SH    +C    T C +      S++   
Sbjct: 8   GLGLALLAVL-LCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKD 66

Query: 62  PLVTKMCHIGCPDIPSLGLGPY-----------VSIACCQTSLCN 95
             V KMC   C  +       Y           V + CC+  LCN
Sbjct: 67  HSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 111


>gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo
           sapiens]
          Length = 161

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 4   GTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDL 61
           G GL L AVL L  A A  +WC  CT     SH    +C    T C +      S++   
Sbjct: 29  GLGLALLAVL-LCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKD 87

Query: 62  PLVTKMCHIGCPDIPSLGLGPY-----------VSIACCQTSLCN 95
             V KMC   C  +       Y           V + CC+  LCN
Sbjct: 88  HSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 132


>gi|9966907 ARS component B precursor [Homo sapiens]
          Length = 103

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 7   LLLAAVLSLQLAAAEAIWCHQCTG---FGGCSHGSRCLRDSTHCVTTATRVLSNT--EDL 61
           LLL A  S+     EA+ C+ C        C   +RC  + T C+TT   V +       
Sbjct: 9   LLLVAAWSM--GCGEALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQS 66

Query: 62  PLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
           P+VT+ C   C       +G    I CC   LCN +
Sbjct: 67  PVVTRSCSSSCVATDPDSIGAAHLIFCCFRDLCNSE 102


>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo
          sapiens]
          Length = 116

 Score = 40.0 bits (92), Expect = 4e-04
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65
          L L  V+ + L  A+A+ CH C   G  C +  RC     +C+TT T     T     V+
Sbjct: 5  LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61

Query: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95
          K C   C +    G   + S  +CCQ  LCN
Sbjct: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92


>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo
          sapiens]
          Length = 116

 Score = 40.0 bits (92), Expect = 4e-04
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65
          L L  V+ + L  A+A+ CH C   G  C +  RC     +C+TT T     T     V+
Sbjct: 5  LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61

Query: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95
          K C   C +    G   + S  +CCQ  LCN
Sbjct: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92


>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo
          sapiens]
          Length = 116

 Score = 40.0 bits (92), Expect = 4e-04
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65
          L L  V+ + L  A+A+ CH C   G  C +  RC     +C+TT T     T     V+
Sbjct: 5  LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61

Query: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95
          K C   C +    G   + S  +CCQ  LCN
Sbjct: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92


>gi|30794264 glycosylphosphatidylinositol anchored high density
           lipoprotein binding protein 1 [Homo sapiens]
          Length = 184

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 11/71 (15%)

Query: 27  QCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM--CHIGCPDIPSLGLGPYV 84
           +C     CSHG  C     H          NTE   L T    C   C  I     G  V
Sbjct: 76  RCNLTQNCSHGQTCTTLIAH---------GNTESGLLTTHSTWCTDSCQPITKTVEGTQV 126

Query: 85  SIACCQTSLCN 95
           ++ CCQ+SLCN
Sbjct: 127 TMTCCQSSLCN 137


>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
          Length = 131

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 1  MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGG---CSHGSRCLRDSTHCVT-TATRVLS 56
          M++   +LLAA+L ++ A++  + C  C        C   + C     +CVT +A+  + 
Sbjct: 1  MKIFLPVLLAALLGVERASS--LMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIG 58

Query: 57 NTEDLP-LVTKMCHIGCPDIPSLGLG-PYVSIACCQTSLCN 95
          N       ++K C   CP    + +G   + I+CCQ+ LCN
Sbjct: 59 NLVTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCN 99


>gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]
          Length = 131

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 1  MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGG---CSHGSRCLRDSTHCVT-TATRVLS 56
          M++   +LLAA+L ++ A++  + C  C        C   + C     +CVT +A+  + 
Sbjct: 1  MKIFLPVLLAALLGVERASS--LMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIG 58

Query: 57 NTEDLP-LVTKMCHIGCPDIPSLGLG-PYVSIACCQTSLCN 95
          N       ++K C   CP    + +G   + I+CCQ+ LCN
Sbjct: 59 NLVTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCN 99


>gi|5031995 prostate stem cell antigen preproprotein [Homo
          sapiens]
          Length = 123

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQC---TGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPL 63
          LL   +  L L    A+ C+ C        C     C +    C T   R +     L +
Sbjct: 5  LLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGL---LTV 61

Query: 64 VTKMCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
          ++K C + C D          +I CC T LCN
Sbjct: 62 ISKGCSLNCVDDSQDYYVGKKNITCCDTDLCN 93


>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)

Query: 5   TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62
           T LL   +L   L     + C  CT  G   HG    C  D   CV    +  S  ++L 
Sbjct: 9   TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68

Query: 63  LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95
              K C I   D    + S  +GP      S  CCQ+  CN
Sbjct: 69  HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108


>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)

Query: 5   TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62
           T LL   +L   L     + C  CT  G   HG    C  D   CV    +  S  ++L 
Sbjct: 9   TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68

Query: 63  LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95
              K C I   D    + S  +GP      S  CCQ+  CN
Sbjct: 69  HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108


>gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)

Query: 5   TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62
           T LL   +L   L     + C  CT  G   HG    C  D   CV    +  S  ++L 
Sbjct: 9   TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68

Query: 63  LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95
              K C I   D    + S  +GP      S  CCQ+  CN
Sbjct: 69  HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108


>gi|53829381 plasminogen activator, urokinase receptor isoform 3
          precursor [Homo sapiens]
          Length = 290

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
          L L  +L   + A+  + C QC   G C     C      C TT  R+    E+L LV K
Sbjct: 7  LPLLLLLHTCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEK 65

Query: 67 MC 68
           C
Sbjct: 66 SC 67


>gi|53829379 plasminogen activator, urokinase receptor isoform 2
          precursor [Homo sapiens]
          Length = 281

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
          L L  +L   + A+  + C QC   G C     C      C TT  R+    E+L LV K
Sbjct: 7  LPLLLLLHTCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEK 65

Query: 67 MC 68
           C
Sbjct: 66 SC 67


>gi|4505865 plasminogen activator, urokinase receptor isoform 1
          precursor [Homo sapiens]
          Length = 335

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
          L L  +L   + A+  + C QC   G C     C      C TT  R+    E+L LV K
Sbjct: 7  LPLLLLLHTCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEK 65

Query: 67 MC 68
           C
Sbjct: 66 SC 67


>gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens]
          Length = 251

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)

Query: 17  LAAAEAIWC---HQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCP 73
           L+ AE   C   HQ     G S   +C +D T C     R+      +P+  + CH   P
Sbjct: 130 LSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCH--RP 187

Query: 74  DIPSLG-LGPYVSI----ACCQTSLCN 95
              + G   P+ +I    +CC+  LCN
Sbjct: 188 SCTTEGTTSPWTAIDLQGSCCEGYLCN 214


>gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens]
          Length = 208

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)

Query: 17  LAAAEAIWC---HQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCP 73
           L+ AE   C   HQ     G S   +C +D T C     R+      +P+  + CH   P
Sbjct: 87  LSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCH--RP 144

Query: 74  DIPSLG-LGPYVSI----ACCQTSLCN 95
              + G   P+ +I    +CC+  LCN
Sbjct: 145 SCTTEGTTSPWTAIDLQGSCCEGYLCN 171


>gi|221554530 prostate and testis expressed 4 [Homo sapiens]
          Length = 98

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 9/94 (9%)

Query: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNT-----EDL 61
          LLL ++  L L     + C+ C      + G +C+     C+     + S T     +  
Sbjct: 7  LLLVSLSFLYLKEVMGLKCNTCI----YTEGWKCMAGRGTCIAKENELCSTTAYFRGDKH 62

Query: 62 PLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
             T MC   C +  S   G      CC  + CN
Sbjct: 63 MYSTHMCKYKCREEESSKRGLLRVTLCCDRNFCN 96


>gi|194097377 ankyrin repeat domain 33 isoform 1 [Homo sapiens]
          Length = 272

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 46  HCVTTATRVLSNTEDLPLVTKMCHIGCPD-IPSLG 79
           H VT  T + S     P VT  CH  CPD  PSLG
Sbjct: 182 HLVTATTSLAS-----PFVTTACHTLCPDHPPSLG 211


>gi|194097375 ankyrin repeat domain 33 isoform 2 [Homo sapiens]
          Length = 452

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 46  HCVTTATRVLSNTEDLPLVTKMCHIGCPD-IPSLG 79
           H VT  T + S     P VT  CH  CPD  PSLG
Sbjct: 307 HLVTATTSLAS-----PFVTTACHTLCPDHPPSLG 336


>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
           sapiens]
          Length = 1037

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 17  LAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCV 48
           L+  E +W   C+    C +G  CL ++ +CV
Sbjct: 565 LSCPEGLWGVNCSNTCTCKNGGTCLPENGNCV 596


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.136    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,803,298
Number of Sequences: 37866
Number of extensions: 143255
Number of successful extensions: 587
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 560
Number of HSP's gapped (non-prelim): 53
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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