Guide to the Human Genome
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Name: MRPL43 Sequence: fasta or formatted (215aa) NCBI GI: 28872732
Description:

mitochondrial ribosomal protein L43 isoform b

Referenced in:

Ribosomes

Other entries for this name:
alt prot [159aa] mitochondrial ribosomal protein L43 isoform a
alt prot [202aa] mitochondrial ribosomal protein L43 isoform c
alt prot [235aa] mitochondrial ribosomal protein L43 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         17           1
 C cysteine            2.3          5           2
 D aspartate           4.7         10           1
 E glutamate           4.2          9           2
 F phenylalanine       3.3          7           1
 G glycine             5.6         12           1
 H histidine           1.9          4           1
 I isoleucine          4.7         10           1
 K lysine              1.9          4           1
 L leucine             8.8         19           2
 M methionine          0.9          2           1
 N asparagine          2.8          6           1
 P proline            10.2         22           2
 Q glutamine           4.7         10           2
 R arginine            8.8         19           2
 S serine              9.8         21           3
 T threonine           5.6         12           2
 V valine              9.8         21           2
 W tryptophan          0.9          2           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L43 isoform b 
MRPL43                0.819   mitochondrial ribosomal protein L43 isoform c 
MRPL43                0.714   mitochondrial ribosomal protein L43 isoform d 
MRPL43                0.709   mitochondrial ribosomal protein L43 isoform a 
MAP3K14               0.029   mitogen-activated protein kinase kinase kinase 14 [...
LOC100132024          0.020   PREDICTED: similar to FLJ00287 protein 
LOC100129979          0.020   PREDICTED: similar to FLJ00287 protein 
LOC100129979          0.020   PREDICTED: similar to FLJ00287 protein 
LOC100129890          0.020   PREDICTED: hypothetical protein 
TRERF1                0.020   transcriptional regulating factor 1 
NDUFA2                0.017   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2...
TNKS                  0.017   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
GBF1                  0.015   golgi-specific brefeldin A resistant guanine nucleoti...
ZNF358                0.015   zinc finger protein 358 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
RALGDS                0.012   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.012   ral guanine nucleotide dissociation stimulator isof...
DTX2                  0.012   deltex 2 isoform b 
DTX2                  0.012   deltex 2 isoform a 
DTX2                  0.012   deltex 2 isoform a 
DTX2                  0.012   deltex 2 isoform a 
ZFHX4                 0.012   zinc finger homeodomain 4 
GP1BA                 0.012   platelet glycoprotein Ib alpha polypeptide precurso...
COL18A1               0.010   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.010   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
MYPOP                 0.010   Myb protein P42POP 
ZFHX3                 0.010   AT-binding transcription factor 1 
WNK2                  0.010   WNK lysine deficient protein kinase 2 
AOAH                  0.010   acyloxyacyl hydrolase precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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