Guide to the Human Genome
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Name: MRPL43 Sequence: fasta or formatted (159aa) NCBI GI: 28872734
Description:

mitochondrial ribosomal protein L43 isoform a

Referenced in:

Ribosomes

Other entries for this name:
alt prot [215aa] mitochondrial ribosomal protein L43 isoform b
alt prot [202aa] mitochondrial ribosomal protein L43 isoform c
alt prot [235aa] mitochondrial ribosomal protein L43 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         11           1
 C cysteine            1.9          3           2
 D aspartate           3.8          6           1
 E glutamate           5.7          9           2
 F phenylalanine       4.4          7           1
 G glycine             6.3         10           1
 H histidine           2.5          4           1
 I isoleucine          4.4          7           1
 K lysine              2.5          4           1
 L leucine             6.3         10           1
 M methionine          0.6          1           1
 N asparagine          3.8          6           1
 P proline             6.9         11           1
 Q glutamine           6.9         11           2
 R arginine           11.3         18           2
 S serine              8.2         13           2
 T threonine           4.4          7           2
 V valine             10.7         17           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L43 isoform a 
MRPL43                0.976   mitochondrial ribosomal protein L43 isoform d 
MRPL43                0.976   mitochondrial ribosomal protein L43 isoform b 
MRPL43                0.976   mitochondrial ribosomal protein L43 isoform c 
NDUFA2                0.024   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2...
DTX2                  0.017   deltex 2 isoform b 
DTX2                  0.017   deltex 2 isoform a 
DTX2                  0.017   deltex 2 isoform a 
DTX2                  0.017   deltex 2 isoform a 
AOAH                  0.013   acyloxyacyl hydrolase precursor 
MAP3K14               0.007   mitogen-activated protein kinase kinase kinase 14 [...
CNTNAP1               0.007   contactin associated protein 1 precursor 
LONRF2                0.007   LON peptidase N-terminal domain and ring finger 2 [...
TMEM87A               0.007   transmembrane protein 87A isoform 2 
TMEM87A               0.007   transmembrane protein 87A isoform 1 
WDR87                 0.007   NYD-SP11 protein 
CANX                  0.007   calnexin precursor 
CANX                  0.007   calnexin precursor 
LOC100133655          0.007   PREDICTED: hypothetical protein 
NUDT18                0.007   nudix (nucleoside diphosphate linked moiety X)-type...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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