Guide to the Human Genome
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Name: MRPL43 Sequence: fasta or formatted (202aa) NCBI GI: 28872736
Description:

mitochondrial ribosomal protein L43 isoform c

Referenced in:

Ribosomes

Other entries for this name:
alt prot [215aa] mitochondrial ribosomal protein L43 isoform b
alt prot [159aa] mitochondrial ribosomal protein L43 isoform a
alt prot [235aa] mitochondrial ribosomal protein L43 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         12           1
 C cysteine            1.5          3           2
 D aspartate           4.5          9           1
 E glutamate           5.0         10           2
 F phenylalanine       3.5          7           1
 G glycine             6.4         13           1
 H histidine           2.5          5           1
 I isoleucine          4.5          9           1
 K lysine              2.0          4           1
 L leucine             8.4         17           2
 M methionine          0.5          1           1
 N asparagine          3.5          7           1
 P proline             8.9         18           1
 Q glutamine           5.4         11           2
 R arginine            9.9         20           2
 S serine              9.4         19           2
 T threonine           5.4         11           2
 V valine              8.9         18           2
 W tryptophan          2.0          4           1
 Y tyrosine            2.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L43 isoform c 
MRPL43                0.859   mitochondrial ribosomal protein L43 isoform b 
MRPL43                0.749   mitochondrial ribosomal protein L43 isoform d 
MRPL43                0.744   mitochondrial ribosomal protein L43 isoform a 
MAP3K14               0.018   mitogen-activated protein kinase kinase kinase 14 [...
NDUFA2                0.018   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2...
RALGDS                0.018   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.018   ral guanine nucleotide dissociation stimulator isof...
WWP2                  0.018   WW domain containing E3 ubiquitin protein ligase 2 i...
WWP2                  0.018   WW domain containing E3 ubiquitin protein ligase 2 i...
DTX2                  0.018   deltex 2 isoform b 
DTX2                  0.018   deltex 2 isoform a 
DTX2                  0.018   deltex 2 isoform a 
DTX2                  0.018   deltex 2 isoform a 
TNRC6A                0.013   trinucleotide repeat containing 6A 
ABP1                  0.010   amiloride binding protein 1 precursor 
AOAH                  0.010   acyloxyacyl hydrolase precursor 
LOC642398             0.010   PREDICTED: hypothetical protein 
SEZ6L                 0.010   seizure related 6 homolog (mouse)-like precursor [Ho...
LOC100293110          0.008   PREDICTED: hypothetical protein 
LOC100289572          0.008   PREDICTED: hypothetical protein 
LOC100289572          0.008   PREDICTED: hypothetical protein XP_002343123 
LOC100294236          0.005   PREDICTED: similar to diffuse panbronchiolitis crit...
LONRF2                0.005   LON peptidase N-terminal domain and ring finger 2 [...
TMEM87A               0.005   transmembrane protein 87A isoform 2 
TMEM87A               0.005   transmembrane protein 87A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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