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Search of human proteins with 28558973
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28558973 mediator complex subunit 14 [Homo sapiens]
(1454 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28558973 mediator complex subunit 14 [Homo sapiens] 2929 0.0
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 59 3e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 1e-07
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 56 2e-07
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 56 2e-07
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 56 2e-07
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 56 3e-07
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 56 3e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 55 4e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 5e-07
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 55 5e-07
gi|116284392 mucin 2 precursor [Homo sapiens] 54 1e-06
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 53 2e-06
gi|47132519 Ras association and pleckstrin homology domains 1 is... 53 2e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 3e-06
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 52 3e-06
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 52 3e-06
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 52 3e-06
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 52 3e-06
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 52 3e-06
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 52 3e-06
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 52 3e-06
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 52 4e-06
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 52 4e-06
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 52 4e-06
gi|55750053 atrophin-1 [Homo sapiens] 52 5e-06
gi|55750041 atrophin-1 [Homo sapiens] 52 5e-06
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 51 9e-06
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 51 9e-06
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 50 1e-05
>gi|28558973 mediator complex subunit 14 [Homo sapiens]
Length = 1454
Score = 2929 bits (7592), Expect = 0.0
Identities = 1454/1454 (100%), Positives = 1454/1454 (100%)
Query: 1 MAPVQLENHQLVPPGGGGGGSGGPPSAPAPPPPGAAVAAAAAAAASPGYRLSTLIEFLLH 60
MAPVQLENHQLVPPGGGGGGSGGPPSAPAPPPPGAAVAAAAAAAASPGYRLSTLIEFLLH
Sbjct: 1 MAPVQLENHQLVPPGGGGGGSGGPPSAPAPPPPGAAVAAAAAAAASPGYRLSTLIEFLLH 60
Query: 61 RAYSELMVLTDLLPRKSDVERKIEIVQFASRTRQLFVRLLALVKWANNAGKVEKCAMISS 120
RAYSELMVLTDLLPRKSDVERKIEIVQFASRTRQLFVRLLALVKWANNAGKVEKCAMISS
Sbjct: 61 RAYSELMVLTDLLPRKSDVERKIEIVQFASRTRQLFVRLLALVKWANNAGKVEKCAMISS 120
Query: 121 FLDQQAILFVDTADRLASLARDALVHARLPSFAIPYAIDVLTTGSYPRLPTCIRDKIIPP 180
FLDQQAILFVDTADRLASLARDALVHARLPSFAIPYAIDVLTTGSYPRLPTCIRDKIIPP
Sbjct: 121 FLDQQAILFVDTADRLASLARDALVHARLPSFAIPYAIDVLTTGSYPRLPTCIRDKIIPP 180
Query: 181 DPITKIEKQATLHQLNQILRHRLVTTDLPPQLANLTVANGRVKFRVEGEFEATLTVMGDD 240
DPITKIEKQATLHQLNQILRHRLVTTDLPPQLANLTVANGRVKFRVEGEFEATLTVMGDD
Sbjct: 181 DPITKIEKQATLHQLNQILRHRLVTTDLPPQLANLTVANGRVKFRVEGEFEATLTVMGDD 240
Query: 241 PDVPWRLLKLEILVEDKETGDGRALVHSMQISFIHQLVQSRLFADEKPLQDMYNCLHSFC 300
PDVPWRLLKLEILVEDKETGDGRALVHSMQISFIHQLVQSRLFADEKPLQDMYNCLHSFC
Sbjct: 241 PDVPWRLLKLEILVEDKETGDGRALVHSMQISFIHQLVQSRLFADEKPLQDMYNCLHSFC 300
Query: 301 LSLQLEVLHSQTLMLIRERWGDLVQVERYHAGKCLSLSVWNQQVLGRKTGTASVHKVTIK 360
LSLQLEVLHSQTLMLIRERWGDLVQVERYHAGKCLSLSVWNQQVLGRKTGTASVHKVTIK
Sbjct: 301 LSLQLEVLHSQTLMLIRERWGDLVQVERYHAGKCLSLSVWNQQVLGRKTGTASVHKVTIK 360
Query: 361 IDENDVSKPLQIFHDPPLPASDSKLVERAMKIDHLSIEKLLIDSVHARAHQKLQELKAIL 420
IDENDVSKPLQIFHDPPLPASDSKLVERAMKIDHLSIEKLLIDSVHARAHQKLQELKAIL
Sbjct: 361 IDENDVSKPLQIFHDPPLPASDSKLVERAMKIDHLSIEKLLIDSVHARAHQKLQELKAIL 420
Query: 421 RGFNANENSSIETALPALVVPILEPCGNSECLHIFVDLHSGMFQLMLYGLDQATLDDMEK 480
RGFNANENSSIETALPALVVPILEPCGNSECLHIFVDLHSGMFQLMLYGLDQATLDDMEK
Sbjct: 421 RGFNANENSSIETALPALVVPILEPCGNSECLHIFVDLHSGMFQLMLYGLDQATLDDMEK 480
Query: 481 SVNDDMKRIIPWIQQLKFWLGQQRCKQSIKHLPTISSETLQLSNYSTHPIGNLSKNKLFI 540
SVNDDMKRIIPWIQQLKFWLGQQRCKQSIKHLPTISSETLQLSNYSTHPIGNLSKNKLFI
Sbjct: 481 SVNDDMKRIIPWIQQLKFWLGQQRCKQSIKHLPTISSETLQLSNYSTHPIGNLSKNKLFI 540
Query: 541 KLTRLPQYYIVVEMLEVPNKPTQLSYKYYFMSVNAADREDSPAMALLLQQFKENIQDLVF 600
KLTRLPQYYIVVEMLEVPNKPTQLSYKYYFMSVNAADREDSPAMALLLQQFKENIQDLVF
Sbjct: 541 KLTRLPQYYIVVEMLEVPNKPTQLSYKYYFMSVNAADREDSPAMALLLQQFKENIQDLVF 600
Query: 601 RTKTGKQTRTNAKRKLSDDPCPVESKKTKRAGEMCAFNKVLAHFVAMCDTNMPFVGLRLE 660
RTKTGKQTRTNAKRKLSDDPCPVESKKTKRAGEMCAFNKVLAHFVAMCDTNMPFVGLRLE
Sbjct: 601 RTKTGKQTRTNAKRKLSDDPCPVESKKTKRAGEMCAFNKVLAHFVAMCDTNMPFVGLRLE 660
Query: 661 LSNLEIPHQGVQVEGDGFSHAIRLLKIPPCKGITEETQKALDRSLLDCTFRLQGRNNRTW 720
LSNLEIPHQGVQVEGDGFSHAIRLLKIPPCKGITEETQKALDRSLLDCTFRLQGRNNRTW
Sbjct: 661 LSNLEIPHQGVQVEGDGFSHAIRLLKIPPCKGITEETQKALDRSLLDCTFRLQGRNNRTW 720
Query: 721 VAELVFANCPLNGTSTREQGPSRHVYLTYENLLSEPVGGRKVVEMFLNDWNSIARLYECV 780
VAELVFANCPLNGTSTREQGPSRHVYLTYENLLSEPVGGRKVVEMFLNDWNSIARLYECV
Sbjct: 721 VAELVFANCPLNGTSTREQGPSRHVYLTYENLLSEPVGGRKVVEMFLNDWNSIARLYECV 780
Query: 781 LEFARSLPDIPAHLNIFSEVRVYNYRKLILCYGTTKGSSISIQWNSIHQKFHISLGTVGP 840
LEFARSLPDIPAHLNIFSEVRVYNYRKLILCYGTTKGSSISIQWNSIHQKFHISLGTVGP
Sbjct: 781 LEFARSLPDIPAHLNIFSEVRVYNYRKLILCYGTTKGSSISIQWNSIHQKFHISLGTVGP 840
Query: 841 NSGCSNCHNTILHQLQEMFNKTPNVVQLLQVLFDTQAPLNAINKLPTVPMLGLTQRTNTA 900
NSGCSNCHNTILHQLQEMFNKTPNVVQLLQVLFDTQAPLNAINKLPTVPMLGLTQRTNTA
Sbjct: 841 NSGCSNCHNTILHQLQEMFNKTPNVVQLLQVLFDTQAPLNAINKLPTVPMLGLTQRTNTA 900
Query: 901 YQCFSILPQSSTHIRLAFRNMYCIDIYCRSRGVVAIRDGAYSLFDNSKLVEGFYPAPGLK 960
YQCFSILPQSSTHIRLAFRNMYCIDIYCRSRGVVAIRDGAYSLFDNSKLVEGFYPAPGLK
Sbjct: 901 YQCFSILPQSSTHIRLAFRNMYCIDIYCRSRGVVAIRDGAYSLFDNSKLVEGFYPAPGLK 960
Query: 961 TFLNMFVDSNQDARRRSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYP 1020
TFLNMFVDSNQDARRRSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYP
Sbjct: 961 TFLNMFVDSNQDARRRSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYP 1020
Query: 1021 LTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGP 1080
LTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGP
Sbjct: 1021 LTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGP 1080
Query: 1081 GASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPD 1140
GASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPD
Sbjct: 1081 GASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPD 1140
Query: 1141 ASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAG 1200
ASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAG
Sbjct: 1141 ASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAG 1200
Query: 1201 SYLCSPLERFLGSVIMRRHLQRIIQQETLQLINSNEPGVIMFKTDALKCRVALSPKTNQT 1260
SYLCSPLERFLGSVIMRRHLQRIIQQETLQLINSNEPGVIMFKTDALKCRVALSPKTNQT
Sbjct: 1201 SYLCSPLERFLGSVIMRRHLQRIIQQETLQLINSNEPGVIMFKTDALKCRVALSPKTNQT 1260
Query: 1261 LQLKVTPENAGQWKPDELQVLEKFFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIM 1320
LQLKVTPENAGQWKPDELQVLEKFFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIM
Sbjct: 1261 LQLKVTPENAGQWKPDELQVLEKFFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIM 1320
Query: 1321 KLELFPDQATQLKWNVQFCLTIPPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEP 1380
KLELFPDQATQLKWNVQFCLTIPPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEP
Sbjct: 1321 KLELFPDQATQLKWNVQFCLTIPPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEP 1380
Query: 1381 VSIIVPIIYDMASGTTQQADIPRQQNSSVAAPMMVSNILKRFAEMNPPRQGECTIFAAVR 1440
VSIIVPIIYDMASGTTQQADIPRQQNSSVAAPMMVSNILKRFAEMNPPRQGECTIFAAVR
Sbjct: 1381 VSIIVPIIYDMASGTTQQADIPRQQNSSVAAPMMVSNILKRFAEMNPPRQGECTIFAAVR 1440
Query: 1441 DLMANLTLPPGGRP 1454
DLMANLTLPPGGRP
Sbjct: 1441 DLMANLTLPPGGRP 1454
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
Length = 816
Score = 59.3 bits (142), Expect = 3e-08
Identities = 73/242 (30%), Positives = 98/242 (40%), Gaps = 31/242 (12%)
Query: 973 ARRRSVNEDDNPPSPIGGDMMDSLISQL---QPPPQQQPFPKQPGTSGAYPLTSPPTSYH 1029
ARR + PSP + +++ +P P +P +P T G S S H
Sbjct: 151 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP---RPPTEGPRKSVSS-ASEH 206
Query: 1030 STVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHG 1089
ST SP+ S G G L+ P+ S + P S GP A +P
Sbjct: 207 STTEPSPAARRRPSAG---------GGLQRPASRSLSSSATPLSSPARSGPSAR-GTPRA 256
Query: 1090 TLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPS-LHSPVPDASHSPRAG 1148
PS P P G P PQV+ P A P + P + S L +P P A SP A
Sbjct: 257 PAHPSQP----KPKGLQALRP--PQVTPPRKDAA-PALGPLSSSPLATPSPSAPPSPSAP 309
Query: 1149 TSSQTMPTNMPPPRKLPQRSWAASIPTI-LTHSAL---NILLLPSPTPGLVPGLAGSYLC 1204
S QT+P+ PP Q + + PT+ THS L + L +P P P LA L
Sbjct: 310 PSLQTLPS--PPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQ 367
Query: 1205 SP 1206
+P
Sbjct: 368 AP 369
Score = 50.4 bits (119), Expect = 1e-05
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 36/215 (16%)
Query: 985 PSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSP 1044
P+ + ++ + S PP Q PF P + P +PP+ ++ P + P
Sbjct: 389 PNALAVHLLQAPFSPPPSPPVQAPF-SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 447
Query: 1045 GNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSG 1104
A P S TPPP + P A P P +P + +P
Sbjct: 448 --------------ASPPMSPSATPPPQAPPPLAAPPLQLAKP----PPQAPPALATP-- 487
Query: 1105 RAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPV-PDASHSPRA----GTSSQTMPTNMP 1159
P + PSP A PG +P +PS P+ P A+ P+A +P + P
Sbjct: 488 --------PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP 539
Query: 1160 --PPRKLPQRSWAASIPTILTHSALNILLLPSPTP 1192
P + P+R T ++ L + L P P P
Sbjct: 540 ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Score = 46.2 bits (108), Expect = 2e-04
Identities = 60/220 (27%), Positives = 87/220 (39%), Gaps = 30/220 (13%)
Query: 1003 PPQQQPFPKQP----GTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGA-- 1056
PPQ P K G + PL +P S + + PS+ SP A+ PS A
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSP----PATPPSQATT 328
Query: 1057 -LRAPS-----------PASFVPTPPPSSH-GISIGPGASFASPHGT--LDPSSPYTMVS 1101
L +P+ P S + TPPP + +++ P + SP + L P + + +
Sbjct: 329 SLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQA 388
Query: 1102 PSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMP-- 1159
P+ A + +P PSP + P PA+P + P A+ +A S P +P
Sbjct: 389 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS---PSATPPSQAPPSLAAPPLQVPPS 445
Query: 1160 PPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLA 1199
PP P A P A L L P P P LA
Sbjct: 446 PPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALA 485
Score = 43.9 bits (102), Expect = 0.001
Identities = 108/442 (24%), Positives = 145/442 (32%), Gaps = 57/442 (12%)
Query: 1000 LQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRA 1059
L P P P P P T A + V + P + G + A+ P A RA
Sbjct: 25 LTPRPPGSPRPPPPVTPAALRVLGAA----GAVGRKPL---AERAGGIGGATIPESAPRA 77
Query: 1060 -PSPASFVPTPPPSSHGISIGPGASFASPHGTLDP--SSPYTMVSPSGRAGNWPGSPQVS 1116
P+ S PP S G P A SP P +S T P G+ G + +
Sbjct: 78 GPTRTS---RPPASGRG-ERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV 133
Query: 1117 GPSPAARMPGMSP---------ANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPR-KLPQ 1166
A P S + P+ +P P + RA + +P P R + P
Sbjct: 134 ARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT 193
Query: 1167 RSWAASIPTILTHSALNILLLPSPTPGLVPGLAGSYLCSPLERFLGSVIMR--------- 1217
S+ + HS PSP P AG L P R L S
Sbjct: 194 EGPRKSVSSASEHSTTE----PSPAARRRPS-AGGGLQRPASRSLSSSATPLSSPARSGP 248
Query: 1218 ------RHLQRIIQQETLQLINSNEPGVIMFKTDALKCRVALSPKTNQTLQLKVTPENAG 1271
R Q + L P V + DA AL P ++ L
Sbjct: 249 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP---ALGPLSSSPLATPSPSAPPS 305
Query: 1272 QWKPDELQVLEKFFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIMKLELFPDQATQ 1331
P LQ L + A PP +A T + L TH + L P QA
Sbjct: 306 PSAPPSLQTLP----SPPATPPSQATTSLGSPTLQA--THSFLPSPPLSPLATPPPQAPP 359
Query: 1332 -LKWNVQFCLTIPPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEPVSIIVPIIYD 1390
L PP++PP++P TP+ + + L L S PP PV P
Sbjct: 360 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL-LQAPFSPPPSPPVQ--APFSPP 416
Query: 1391 MASGTTQQADIPRQQNSSVAAP 1412
+ + A P Q S+AAP
Sbjct: 417 ASPPVSPSATPPSQAPPSLAAP 438
Score = 38.5 bits (88), Expect = 0.048
Identities = 48/174 (27%), Positives = 64/174 (36%), Gaps = 12/174 (6%)
Query: 983 NPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
+PP+ G S + L P P P+ P A L PP+ S Q+P T
Sbjct: 494 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT- 552
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSP-----Y 1097
PG + S P L A +P P PPPS S G A H + S+P Y
Sbjct: 553 -PGPDTSVSGPRLTL-ALAPG---PPPPPSRSPSSTLSGPDLAG-HSSSATSTPEELRGY 606
Query: 1098 TMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSS 1151
G A + P +++ PAA G +P +P P G S
Sbjct: 607 DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGS 660
Score = 37.7 bits (86), Expect = 0.081
Identities = 54/224 (24%), Positives = 72/224 (32%), Gaps = 43/224 (19%)
Query: 1002 PPPQQQPF---------PKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAAS- 1051
PPPQ P P P + PPT T P + +PG S
Sbjct: 519 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 578
Query: 1052 SPSGALRAPSPA---SFVPTPPPSSHGISIGP-GASFASPHGTLD------------PSS 1095
SPS L P A S + P G GP G + ASP + P+
Sbjct: 579 SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAP 638
Query: 1096 PYTMVSPSGRAGNWPGSP------------QVSGPSPAARMPGMSPANPSLHSPVPDASH 1143
P G WP + + GP A PG PS + A+
Sbjct: 639 PLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAA 698
Query: 1144 SPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLL 1187
AG SS++ P +L + A +++ H LLL
Sbjct: 699 GAGAGASSRS-----PKQARLGELPLGALQASVVQHLLSRTLLL 737
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.4 bits (137), Expect = 1e-07
Identities = 68/234 (29%), Positives = 92/234 (39%), Gaps = 28/234 (11%)
Query: 984 PPSPIGGDMMDSLISQLQP-----PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSM 1038
PPSP G S ++ L P PP++ P P +P P T Q+P++
Sbjct: 858 PPSPKGAPT-PSAVTPLSPKGVTLPPKETPTPSVVNLP--FPKEGPATP---APKQAPAL 911
Query: 1039 -MHTQSPGNLHAASSPSGALRAPSPASFVPTPP----PSSHGISIGPGASFA-SPHGTLD 1092
M + SP A +P G +PSP PTPP PS G P +A +P
Sbjct: 912 SMTSSSPKKARATPAPKGIPASPSPKG-APTPPAATPPSPKGGPATPSPKWAPTPPAATP 970
Query: 1093 PSSPYTMVSPSGRAGNWPGSPQVSGPSP----AARMPGMSPANPSLHSPVPDASHSPRAG 1148
PS +PS + P P + PSP A P +P P++ P P S +
Sbjct: 971 PSPKGGPATPSPKGA--PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPF 1028
Query: 1149 TSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPG-LVPGLAGS 1201
+ P PP P+ S AA+ P LPSP G P L G+
Sbjct: 1029 PKGASTPPAATPPS--PKGSPAAT-PLPKGAPTTPAATLPSPKGGPATPSLKGA 1079
Score = 56.6 bits (135), Expect = 2e-07
Identities = 74/254 (29%), Positives = 91/254 (35%), Gaps = 45/254 (17%)
Query: 985 PSPIGGDMMDSLISQLQPPPQQQPFPK----QPGTSGAY--PLTSPP-------TSYHST 1031
PSP GG SL PP P PK P GA P +PP T H
Sbjct: 1065 PSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG 1124
Query: 1032 VNQSPSMMHTQSPGNLHAASSPSGA-----LRAPSPASFVPTPPPSSHGISIGPGASFAS 1086
+P+ G L A P GA PSP + TPPP G P A+ S
Sbjct: 1125 APTTPAATPPSPKGGL-ATPPPKGAPTTPAATPPSPKGGLATPPPK--GAPTTPAATPPS 1181
Query: 1087 PHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSP----AARMPGMSPANPSLHSPVPDAS 1142
P G L ++P SP G P +P + PSP A P +P P+ P P
Sbjct: 1182 PKGGL--ATP----SPKGA----PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1231
Query: 1143 HSPRAGTSSQTMPTNMPPPRK----LPQRSWAASIPTILTHSALNILLLP----SPTPGL 1194
+ + + T P PP K P A + P S L P +P P +
Sbjct: 1232 LATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAV 1291
Query: 1195 V--PGLAGSYLCSP 1206
V P G SP
Sbjct: 1292 VTPPSPKGGPATSP 1305
Score = 55.5 bits (132), Expect = 4e-07
Identities = 70/258 (27%), Positives = 92/258 (35%), Gaps = 47/258 (18%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQS 1043
PPSP GG S PP P PK G+ A P ++ + SP +
Sbjct: 993 PPSPKGGPATPSPKGAPTPPAVTPPSPK--GSPAATPFPKGASTPPAATPPSPKGSPAAT 1050
Query: 1044 PGNLHAASSPSGALRAPS--PAS----FVPTPP-------------PSSHGISIGPGASF 1084
P A ++P+ L +P PA+ PTPP PS G + P A+
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP 1110
Query: 1085 ASPHGTLD-------PSSPY-TMVSPSGRAGN-----WPGSPQVSGPSP----AARMPGM 1127
SP G L P++P T SP G P +P + PSP A P
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKG 1170
Query: 1128 SPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRK----LPQRSWAASIPTILTHSALN 1183
+P P+ P P + + + T P PP K P A + P S
Sbjct: 1171 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230
Query: 1184 ILLLPSP-----TPGLVP 1196
L PSP TP P
Sbjct: 1231 GLATPSPKGAPTTPAATP 1248
Score = 49.7 bits (117), Expect = 2e-05
Identities = 64/240 (26%), Positives = 81/240 (33%), Gaps = 33/240 (13%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPK----QPGTSGA--YPLTSPPTSYHSTVNQSPS 1037
PPSP GG P P PK P GA P +PP+ SP
Sbjct: 1156 PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK 1215
Query: 1038 MMHTQSPGNLHAASSPSGALRAPSPASFVPTP---PPSSHGISIGPGASFA-SPHGTLDP 1093
T SP G L PSP TP PPS G P A +P P
Sbjct: 1216 GAPTTPAAT---PPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP 1272
Query: 1094 SSPYTMVSPSGRAGNWP---------GSPQVSGPSPAARMPGMSPANP--SLHSPVPDAS 1142
S + +P + P G P S P A P +P +P S +P P +
Sbjct: 1273 SLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGA 1332
Query: 1143 HSPRAGT-----SSQTMPTNMPPPRKLPQRSWAASIPT----ILTHSALNILLLPSPTPG 1193
+P A T + T+P P + P + PT +H + PSP G
Sbjct: 1333 PTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRG 1392
Score = 42.4 bits (98), Expect = 0.003
Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 51/232 (21%)
Query: 1002 PPPQQQPFPKQPGTSGA--------YPLTSP----------------PTSYHSTVNQSPS 1037
P P++ P PKQ TS + P+ +P P+S + + +
Sbjct: 1473 PSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTAT 1532
Query: 1038 MMHTQSPGNL---HAASSPSGALRAPSPASFVPTP-----PPSSHGISIGPGASFASPHG 1089
++ ++P L A P+ + +P +PTP PSS S P + ++ G
Sbjct: 1533 LLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKG 1592
Query: 1090 TLDPSS---PYTMVSPSGRAGNWPGSPQVSGPS----PAARMPGMSPANPSL-HSPVPDA 1141
P P + SPS + P P V+ PS PA P +P +P + S + D+
Sbjct: 1593 APSPKELLIPPAVTSPSPKEA--PTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDS 1650
Query: 1142 SHSPRAGTSSQTMPTNMPPPRK-LPQRSWAASIPTILTHSALNILLLPSPTP 1192
SP + T M +P K LP + ++ +L A P TP
Sbjct: 1651 PTSPASVTCK--MGATVPQASKGLPAKKGPTALKEVLVAPA------PESTP 1694
Score = 39.7 bits (91), Expect = 0.021
Identities = 60/237 (25%), Positives = 85/237 (35%), Gaps = 40/237 (16%)
Query: 984 PPSPIGGDMMD--------------SLISQLQPPPQQ---QPFPKQPGTSGAYPLTSPPT 1026
PPSP GG SL L PP + P P + P TSPP
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 1027 SYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFAS 1086
+ +P SP P GA P+P + PPS G P + +S
Sbjct: 1308 GAPTPPAATPP-----SPKGSPGTPPPKGA---PTPPA---VTPPSPKGTPTLPATTPSS 1356
Query: 1087 PHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPS----PAARMPGMSPANPSLHSPVPDAS 1142
G PSS P+ + G P ++ PS PA P P +P++ P +
Sbjct: 1357 KGGPTTPSSKEGPTPPAATPSH-KGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKA 1415
Query: 1143 HSPRAGTSSQTMPT--NMPPPRKLP---QRSWAASIPT--ILTHSALNILLLPSPTP 1192
+ P+ ++ PP P +++ A S P T S+ LP+ TP
Sbjct: 1416 PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTP 1472
Score = 38.9 bits (89), Expect = 0.036
Identities = 45/211 (21%), Positives = 76/211 (36%), Gaps = 16/211 (7%)
Query: 955 PAPGLKTFLNMFVDSNQDARRRSVNEDDNPPSPIGGDMMDSLISQLQPPP----QQQPFP 1010
PAP + ++ S P P + +S + P P Q+
Sbjct: 1688 PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSK 1747
Query: 1011 KQPGTSGAY----PLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFV 1066
G ++ PL P + + + + P + +++PS + P S V
Sbjct: 1748 TAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPV 1807
Query: 1067 PTPPPSSHGISIGPGASFASPHGTLDPSSP---YTMVSPSGRAGNWP-GSPQVSGPSPAA 1122
PT PP + PG SP L P+ ++ P +G P S V+ P+P
Sbjct: 1808 PTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTP-- 1865
Query: 1123 RMPGMSPANPSLHSPVPDASHSPRAGTSSQT 1153
+ G+ PS PV ++ +GT S +
Sbjct: 1866 KSAGIPVPTPSAKQPV--TKNNKGSGTESDS 1894
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 56.2 bits (134), Expect = 2e-07
Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 30/228 (13%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PP P P +S T+ P + +T PS + P A +P AP
Sbjct: 169 PPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSS--SAPPETTAAPPTPPATTPAPP 226
Query: 1062 PASFVP---TPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGP 1118
+S P PP+ + P +S A P T P +P S P
Sbjct: 227 SSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTP---------------SATTLDP 271
Query: 1119 SPAARMPGMS--PANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTI 1176
S A+ P + P PS +P P +S +P+ T++ N P P S ++ PT
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTH 331
Query: 1177 LTHSALNILLLPSPTPGLVPGLAGSYLCSPLERFLGSVIMRRHLQRII 1224
T +++ + P PG + + RFL + M+ L RII
Sbjct: 332 QTTTSVTTQTTTTKQPTSAPGQ------NKISRFL--LYMKNLLNRII 371
Score = 33.5 bits (75), Expect = 1.5
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 16/173 (9%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPG------NLHAASSPSG 1055
P P Q P +S P T S S S T P N SS
Sbjct: 85 PNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSREN 144
Query: 1056 ALRAPSPASFVPTPPPSSHGISIGPGASFAS----PHGTLDPSSPYTMVSPSGRAGNWPG 1111
+ S A+ P P+ + P A+ P + P + +PS P
Sbjct: 145 VNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPS 204
Query: 1112 S---PQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPP 1161
S P+ + P P +PA PS +P P+ + +P +++ P + P
Sbjct: 205 SSAPPETTAAPPTP--PATTPAPPSSSAP-PETTAAPPTPSATTPAPLSSSAP 254
Score = 31.2 bits (69), Expect = 7.6
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1119 SPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMP---TNMPPPRKLPQRSWAA 1171
SPA + +P PS +P P +S +P T++ P T PP P + AA
Sbjct: 159 SPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 56.2 bits (134), Expect = 2e-07
Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 30/228 (13%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PP P P +S T+ P + +T PS + P A +P AP
Sbjct: 169 PPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSS--SAPPETTAAPPTPPATTPAPP 226
Query: 1062 PASFVP---TPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGP 1118
+S P PP+ + P +S A P T P +P S P
Sbjct: 227 SSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTP---------------SATTLDP 271
Query: 1119 SPAARMPGMS--PANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTI 1176
S A+ P + P PS +P P +S +P+ T++ N P P S ++ PT
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTH 331
Query: 1177 LTHSALNILLLPSPTPGLVPGLAGSYLCSPLERFLGSVIMRRHLQRII 1224
T +++ + P PG + + RFL + M+ L RII
Sbjct: 332 QTTTSVTTQTTTTKQPTSAPGQ------NKISRFL--LYMKNLLNRII 371
Score = 33.5 bits (75), Expect = 1.5
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 16/173 (9%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPG------NLHAASSPSG 1055
P P Q P +S P T S S S T P N SS
Sbjct: 85 PNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSREN 144
Query: 1056 ALRAPSPASFVPTPPPSSHGISIGPGASFAS----PHGTLDPSSPYTMVSPSGRAGNWPG 1111
+ S A+ P P+ + P A+ P + P + +PS P
Sbjct: 145 VNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPS 204
Query: 1112 S---PQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPP 1161
S P+ + P P +PA PS +P P+ + +P +++ P + P
Sbjct: 205 SSAPPETTAAPPTP--PATTPAPPSSSAP-PETTAAPPTPSATTPAPLSSSAP 254
Score = 31.2 bits (69), Expect = 7.6
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1119 SPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMP---TNMPPPRKLPQRSWAA 1171
SPA + +P PS +P P +S +P T++ P T PP P + AA
Sbjct: 159 SPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 56.2 bits (134), Expect = 2e-07
Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 30/228 (13%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PP P P +S T+ P + +T PS + P A +P AP
Sbjct: 169 PPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSS--SAPPETTAAPPTPPATTPAPP 226
Query: 1062 PASFVP---TPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGP 1118
+S P PP+ + P +S A P T P +P S P
Sbjct: 227 SSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTP---------------SATTLDP 271
Query: 1119 SPAARMPGMS--PANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTI 1176
S A+ P + P PS +P P +S +P+ T++ N P P S ++ PT
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTH 331
Query: 1177 LTHSALNILLLPSPTPGLVPGLAGSYLCSPLERFLGSVIMRRHLQRII 1224
T +++ + P PG + + RFL + M+ L RII
Sbjct: 332 QTTTSVTTQTTTTKQPTSAPGQ------NKISRFL--LYMKNLLNRII 371
Score = 33.5 bits (75), Expect = 1.5
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 16/173 (9%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPG------NLHAASSPSG 1055
P P Q P +S P T S S S T P N SS
Sbjct: 85 PNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSREN 144
Query: 1056 ALRAPSPASFVPTPPPSSHGISIGPGASFAS----PHGTLDPSSPYTMVSPSGRAGNWPG 1111
+ S A+ P P+ + P A+ P + P + +PS P
Sbjct: 145 VNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPS 204
Query: 1112 S---PQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPP 1161
S P+ + P P +PA PS +P P+ + +P +++ P + P
Sbjct: 205 SSAPPETTAAPPTP--PATTPAPPSSSAP-PETTAAPPTPSATTPAPLSSSAP 254
Score = 31.2 bits (69), Expect = 7.6
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1119 SPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMP---TNMPPPRKLPQRSWAA 1171
SPA + +P PS +P P +S +P T++ P T PP P + AA
Sbjct: 159 SPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 55.8 bits (133), Expect = 3e-07
Identities = 80/301 (26%), Positives = 122/301 (40%), Gaps = 47/301 (15%)
Query: 986 SPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPG 1045
S G ++ S+ L P P P SGA P S T +T +PS+ +Q+PG
Sbjct: 1466 SASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLAT---APSLSSSQTPG 1522
Query: 1046 NLHAASSPSGALRAPSPASFVP----TPPPSSHGISIGPGASFASPHGTLDPSSP--YTM 1099
+ L AP+ +S VP T P+ + + P ++ ASP + +P ++
Sbjct: 1523 H--------PLLLAPT-SSHVPGLNSTVAPACSPVLV-PASALASPFPSAPNPAPAQASL 1572
Query: 1100 VSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAG---TSSQTMPT 1156
++P+ A +P +P + SPA P +P+P + SP A SSQT P
Sbjct: 1573 LAPASSASQALATPLAPMAAPQTAILAPSPAPPL--APLPVLAPSPGAAPVLASSQT-PV 1629
Query: 1157 NMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAGSYLCSPLERFLGSVIM 1216
+ P P S A++ P +P+PTP L P + L +P+ L S
Sbjct: 1630 PVMAPSSTPGTSLASASP------------VPAPTPVLAPSSTQTMLPAPVPSPLPSPAS 1677
Query: 1217 RRHLQRI----------IQQETLQLINSNEPGVIMFKTDALKCRVALSPKTNQTLQLKVT 1266
+ L +TL L N G +T +L +L P QTL L
Sbjct: 1678 TQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPG 1737
Query: 1267 P 1267
P
Sbjct: 1738 P 1738
Score = 48.1 bits (113), Expect = 6e-05
Identities = 65/232 (28%), Positives = 91/232 (39%), Gaps = 37/232 (15%)
Query: 995 SLISQLQPPPQQQPFPKQPGTSGAYPLTSP-PT--SYHSTVNQ-SPSMMHTQSPGNLHAA 1050
+LI + P P P P ++ P T+P PT S NQ P+M++ +
Sbjct: 1258 ALIQAVAPTPGPTPVSVLPSST---PSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVR 1314
Query: 1051 SSPSGALRAPSPASFVPTPPPSSHGISIGPGASFAS---PHGTLD----PSSPYTMVSPS 1103
+P L P + P PP S + P + P TL P T+V P
Sbjct: 1315 QAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPL 1374
Query: 1104 GRAGNWPGSPQVSGPSPAA---------RMPGMSPANPSLHSPVPDASH--SPRAGTSSQ 1152
+ + P SP+VS +P A +P P S P+P++S SP + T S
Sbjct: 1375 LKLVHSP-SPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSV 1433
Query: 1153 --------TMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVP 1196
++PT +P P P I LT SA LL S TP L P
Sbjct: 1434 PLSSSLPISVPTTLPAPASAP---LTIPISAPLTVSASGPALLTSVTPPLAP 1482
Score = 43.5 bits (101), Expect = 0.001
Identities = 48/185 (25%), Positives = 68/185 (36%), Gaps = 39/185 (21%)
Query: 1007 QPFPKQPGTS-----------GAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSG 1055
QP PKQ G + G P+ PP S +P + P +L ++SP+G
Sbjct: 999 QPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSA-QPTPGPVPQVLPASLMVSASPAG 1057
Query: 1056 -----ALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWP 1110
A R P P P P S + P + GT P +P + P+
Sbjct: 1058 PPLIPASRPPGPVLLPPLQPNSGSLPQVLP-SPLGVLSGTSRPPTPTLSLKPTP------ 1110
Query: 1111 GSPQVSGPSPAARMPGMSPANPSLHSPV---PDASHSPRAGTSSQTMP-----TNMPPPR 1162
P+P P P + SL P+ P + P A T++ T T +P P
Sbjct: 1111 -------PAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPT 1163
Query: 1163 KLPQR 1167
PQR
Sbjct: 1164 PAPQR 1168
Score = 40.8 bits (94), Expect = 0.010
Identities = 61/228 (26%), Positives = 86/228 (37%), Gaps = 32/228 (14%)
Query: 1008 PFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALR-----APSP 1062
PFP P + A P S S +P + +P A SP+ L APSP
Sbjct: 1558 PFPSAPNPAPAQASLLAPASSASQALATP-LAPMAAPQTAILAPSPAPPLAPLPVLAPSP 1616
Query: 1063 -------ASFVPTP---PPSSHGISIGPGASFASPHGTLDPSSPYTMV-SPSGRAGNWPG 1111
+S P P P S+ G S+ + +P L PSS TM+ +P P
Sbjct: 1617 GAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPA 1676
Query: 1112 SPQ--VSGPSPAARMPGMSPA--------NPSLHSPVPDASHSPRAG---TSSQTMPTNM 1158
S Q P+ A + G SP+ NP P S +P + T +QT+
Sbjct: 1677 STQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAP 1736
Query: 1159 PPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAGSYLCSP 1206
PP Q A P + S + P+ T L P + + L +P
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVG--PAPAHTLTLAPASSSASLLAP 1782
Score = 38.9 bits (89), Expect = 0.036
Identities = 52/199 (26%), Positives = 69/199 (34%), Gaps = 27/199 (13%)
Query: 976 RSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQS 1035
RS++ ++ P PIGG + S L PPQQ ++ G SP
Sbjct: 2794 RSMSGPESSP-PIGGPCEAAPSSSLPTPPQQPFIARRHIELGVTGGGSP----------- 2841
Query: 1036 PSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDP-S 1094
G L A + P+ R P +P + G+ P ++ DP
Sbjct: 2842 -----ENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSSTLKGKTNGADPVP 2896
Query: 1095 SPYTMV--SPSGRAGNWPGSPQVSGPSPAAR-MPGMSPANPSLHSPVPDASHSPRAGTSS 1151
P T++ P PG PQ GP P R P +SP P A P GT S
Sbjct: 2897 GPETLIVADPVLEPQLIPG-PQPLGPQPVHRPNPLLSPVEKRRRGRPPKARDLPIPGTIS 2955
Query: 1152 QTMPTN-----MPPPRKLP 1165
N PPP P
Sbjct: 2956 SAGDGNSESRTQPPPHPSP 2974
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 55.8 bits (133), Expect = 3e-07
Identities = 51/171 (29%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP 1062
PP P PG P PPTS V+ +H +PG P+ + P+P
Sbjct: 303 PPAPGVHPPAPGVHPPAPGVHPPTS---GVHPPAPGVHPPAPG----VHPPAPGVHPPAP 355
Query: 1063 ASFVPTP---PPSSHGISI-GPGASFASPHGTLDPSSPYTMVSPSGRAGNWPG-SPQVSG 1117
P P PP S G+ PG A+P + P +P G PG PQ G
Sbjct: 356 GVHPPAPGVHPPPSAGVHPQAPGVHPAAP--AVHPQAPGVHPPAPGMHPQAPGVHPQPPG 413
Query: 1118 PSPAA-----RMPGMSPANPSLH--SPVPDASHSPRAGTSSQTMPTNMPPP 1161
P+A + PG+ P+NP +H +P+P P P N+PPP
Sbjct: 414 VHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEG----PGNIPPP 460
Score = 48.5 bits (114), Expect = 5e-05
Identities = 46/170 (27%), Positives = 58/170 (34%), Gaps = 19/170 (11%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PPP P +P + P PP + P A S P G + P
Sbjct: 234 PPPLMNGLPPRPPLPESLP--PPPPG---------GLPLPPMPPTGPAPSGPPGPPQLPP 282
Query: 1062 PASFVPTPPPSSHGISIG---PGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGP 1118
PA V P P H + G P P + P +P SG P +P V P
Sbjct: 283 PAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH---PPAPGVHPP 339
Query: 1119 SPAAR--MPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQ 1166
+P PG+ P P +H P P P AG Q + P PQ
Sbjct: 340 APGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQ 389
Score = 30.8 bits (68), Expect = 9.9
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 1000 LQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRA 1059
+ PPP P+ PG A P P V+ MH Q+PG P G
Sbjct: 364 VHPPPSAGVHPQAPGVHPAAPAVHPQA---PGVHPPAPGMHPQAPG---VHPQPPGV--H 415
Query: 1060 PSPASFVPTPP---PSSHGI 1076
PS P PP PS+ G+
Sbjct: 416 PSAPGVHPQPPGVHPSNPGV 435
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 55.5 bits (132), Expect = 4e-07
Identities = 54/198 (27%), Positives = 73/198 (36%), Gaps = 28/198 (14%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PPP Q P P P GA Q+P + +P A++P L+ P
Sbjct: 727 PPPAQDPAPATPVAKGA-----------GLGPQAPDSQASPAPAPQIPAAAP---LKGPG 772
Query: 1062 PASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPA 1121
P+S P H +G SPH T PS P + R + P P
Sbjct: 773 PSS----SPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAP 828
Query: 1122 ARMPGMSPANPSLHSPVPDASHSPRAGTSSQ--TMPTNMPPPRKLPQRSWAASIPTILTH 1179
+PG+ L P P ++ +P A Q P + PP LP A +P T
Sbjct: 829 PTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPP---APHLPPSSTS 885
Query: 1180 SAL-----NILLLPSPTP 1192
SA+ LP+PTP
Sbjct: 886 SAVASSSETSSRLPAPTP 903
Score = 53.9 bits (128), Expect = 1e-06
Identities = 67/240 (27%), Positives = 95/240 (39%), Gaps = 65/240 (27%)
Query: 1002 PPPQQQPFPKQPGTSGA--YPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRA 1059
PPP P P PG P + PP + +P + + + + ++S S L A
Sbjct: 844 PPPASNPAPTAPGPPQPPLRPQSQPP---EGPLPPAPHLPPSSTSSAVASSSETSSRLPA 900
Query: 1060 PSPASF------------VPTPPPSSHGISIGPGASFASPHGTLD------PSSPYTMV- 1100
P+P+ F PTPPP+ H + P A P T P+ P
Sbjct: 901 PTPSDFQLQFPPSQGPHKSPTPPPTLHLVP-EPAAPPPPPPRTFQMVTTPFPALPQPKAL 959
Query: 1101 ------SPSG-----RAGNWPGSPQVS---GP--SPAA------RMPGMSPANPSLHSPV 1138
PSG +AG P +PQ S GP SPAA + P +P PS H+P
Sbjct: 960 LERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPS-HAPA 1018
Query: 1139 PDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGL 1198
P +P A T +PP +++A+++PT LN+ S PG GL
Sbjct: 1019 P----APMAA-------TGLPPLLPAENKAFASNLPT------LNVAKAASSGPGKPSGL 1061
Score = 43.1 bits (100), Expect = 0.002
Identities = 53/219 (24%), Positives = 79/219 (36%), Gaps = 33/219 (15%)
Query: 999 QLQPPPQQ---QPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMM------HTQSPGNL-- 1047
Q PPQ QP P + L PP++ + + S+ +Q P +
Sbjct: 654 QAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEG 713
Query: 1048 -HAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRA 1106
H + S + AP PA P + G +GP A P + SP+ A
Sbjct: 714 PHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQA-------------PDSQASPA-PA 759
Query: 1107 GNWPGSPQVSGPSPAA--RMPGMSPANPSLHSPVPDASHSPRAGTS---SQTMPTNMPPP 1161
P + + GP P++ +P +P S H P P + P S S + P + PP
Sbjct: 760 PQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPL 819
Query: 1162 RKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAG 1200
P ++P I N L +P P P G
Sbjct: 820 HPCPPPQAPPTLPGIFV--IQNQLGVPPPASNPAPTAPG 856
Score = 37.4 bits (85), Expect = 0.11
Identities = 49/217 (22%), Positives = 77/217 (35%), Gaps = 44/217 (20%)
Query: 1020 PLTSPPTSYHSTVNQSPSMMHT------QSPGNLHAASSPSGALRAPSPASFVPTPPPSS 1073
P+ +P + HS S + + Q P +L A S P+ + AP+
Sbjct: 528 PVLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPA------------ 575
Query: 1074 HGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPS 1133
GP A+ TL PS+ + +P G + +P + A P+
Sbjct: 576 -----GPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPA 630
Query: 1134 LHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPG 1193
+ +P+P P+A PP PQ AA+ P T P P+PG
Sbjct: 631 VSTPLPLGLQQPQA---------QQPPQAPTPQ---AAAPPQATT---------PQPSPG 669
Query: 1194 LVPGLAGSYLCSPLERFLGSVIMRRHLQRIIQQETLQ 1230
L L P +++ + LQ + QE Q
Sbjct: 670 LASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQ 706
Score = 32.7 bits (73), Expect = 2.6
Identities = 43/205 (20%), Positives = 71/205 (34%), Gaps = 26/205 (12%)
Query: 1003 PPQQQPFPKQP-GTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
P Q QP P P T+ +T PP++ +M++T P L ++P+ A +
Sbjct: 567 PTQSQPAPAGPAATTVLQGVTLPPSAV--------AMLNT--PDGLVQPATPAAATGEAA 616
Query: 1062 PASFVPTPPPSSHGISIGPGASFASPHGTLDPSSP---------YTMVSPSGRAGNWP-- 1110
P V P + +S P P +P T PS + P
Sbjct: 617 PVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEK 676
Query: 1111 ---GSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQR 1167
G P + P+ + P S P ++ P + + + PPP + P
Sbjct: 677 IVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVI-VSAPPPAQDPAP 735
Query: 1168 SWAASIPTILTHSALNILLLPSPTP 1192
+ + L A + P+P P
Sbjct: 736 ATPVAKGAGLGPQAPDSQASPAPAP 760
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 55.1 bits (131), Expect = 5e-07
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 984 PPSPIGGDMMDSLISQLQPP------PQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPS 1037
PP+ + +++L S PP P P + P PL +PP+ + ++PS
Sbjct: 526 PPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPS 585
Query: 1038 MMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSS-HGISIGPGASFASPHGTLDPSSP 1096
+ T P A +SP P S + TPPP + +++ P + SP + P SP
Sbjct: 586 SIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPAS-PPLSP 644
Query: 1097 YTMVSPSGRAGNW------------PGSPQVSGP---------SPAARMPGMSPANPSLH 1135
+ +PS +A N P SP V P SP+A P +P PSL
Sbjct: 645 --LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP--PSLA 700
Query: 1136 SPVPDASHSPRAG---TSSQTMPTNMPPPRKLP 1165
+P SP A + S T P PPP P
Sbjct: 701 APPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 733
Score = 53.9 bits (128), Expect = 1e-06
Identities = 78/254 (30%), Positives = 98/254 (38%), Gaps = 52/254 (20%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVN-QSP---SMM 1039
PPSP+ ++ S PPPQ P P G L SPP S +T Q+P ++
Sbjct: 572 PPSPLTTPPPETPSSIATPPPQAPPALASPPLQG---LPSPPLSPLATPPPQAPPXLALP 628
Query: 1040 HTQSPGNLHAASSPSGALRAPSP------------ASFVPTP---------PPSSHGISI 1078
Q+P + AS P L PSP A F P P PP+S +S
Sbjct: 629 PLQAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS- 686
Query: 1079 GPGA--------SFASPHGTLDPSSPYT-MVSPSGRAGNWPGSPQVSGPSPAARMPGMSP 1129
P A S A+P + PS P + +SPS +P P P A P P
Sbjct: 687 -PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS-------ATPPPQAPPPLAAPPLQVP 738
Query: 1130 ANPSLHSPV-PDASHSPRAGTSSQTMPTNMP--PPRKLPQRSWAASIPTILTHSALNIL- 1185
+P P+ P A+ PR P +P PP LP A P A L
Sbjct: 739 PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQ 798
Query: 1186 LLPSPTPGLVPGLA 1199
LPSP P PG A
Sbjct: 799 ALPSP-PASFPGQA 811
Score = 53.5 bits (127), Expect = 1e-06
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 28/233 (12%)
Query: 985 PSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSP 1044
P+ + ++ + S PP Q PF P + P +PP+ ++ P + P
Sbjct: 653 PNALAVHLLQAPFSPPPSPPVQAPF-SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 711
Query: 1045 GNLHAASSPSGALRAPSPASF----VPTPPPSSHGISIGPGAS--------FASPHGTLD 1092
+ + S + +AP P + VP PP+S +S P A+ A+P +
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMS--PSATPPPRVPPLLAAPPLQVP 769
Query: 1093 PSSPYTM-----VSPSGRAGNWPGSPQVSG-PSPAARMPGMSPANPSLHSPV-PDASHSP 1145
PS P ++ P +A +P + PSP A PG +P +PS P+ P A+ P
Sbjct: 770 PSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 829
Query: 1146 RA----GTSSQTMPTNMP--PPRKLPQRSWAASIPTILTHSALNILLLPSPTP 1192
+A +P + P P + P+R T ++ L + L P P P
Sbjct: 830 QAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 882
Score = 53.1 bits (126), Expect = 2e-06
Identities = 114/441 (25%), Positives = 158/441 (35%), Gaps = 51/441 (11%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPP--TSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAP 1060
PPQ P P++ PL+S P T S P + L A PS L P
Sbjct: 282 PPQVTP-PRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATP 340
Query: 1061 SP-ASFVPTPPPSSHGISIGPGA--SFASPHGTLDP--SSPYTMVSPSGRAGNWPGSPQV 1115
P A P+ PPS + P S A P T P + P P + + SP +
Sbjct: 341 LPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSL 400
Query: 1116 SGPSPAARMPGMSPANPSLHSPVPDASHS-----PRAGTSSQTMPTNMPPPRKLPQRSWA 1170
P + + A SL SP A+HS PR +S T P+ P P S
Sbjct: 401 QAPPSPLALSSLQ-ATTSLGSPTLQATHSFLTMSPRQTQASLTSPSR---PASTPPDSPP 456
Query: 1171 ASIPTILTHSA-LNILLLPSPTPGLVPGLAGSYLCSPLERF--LGSVIMRRHLQRIIQQE 1227
P L S L L P+ +P L+ PL+ L S + L +I
Sbjct: 457 LQAPLSLPASPPLQTSLSPAVSP-----LSSPLTIHPLQALSSLASHSPQAPLSSLIMPP 511
Query: 1228 TLQLINSNEPGVIM-----FKTDALKCRVALSPKTNQTLQLKVTPENAG----------Q 1272
L+ +S P + T L+ +L+P QT +T + Q
Sbjct: 512 -LETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQ 570
Query: 1273 WKPDELQVLEKFFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIMKLELFPDQATQ- 1331
P L + +A PP +A +A L G P+ L L P QA
Sbjct: 571 APPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSP------LATPPPQAPPX 624
Query: 1332 LKWNVQFCLTIPPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEPVSIIVPIIYDM 1391
L PP++PP++P TP+ + + L L S PP PV P
Sbjct: 625 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL-LQAPFSPPPSPPVQ--APFSPPA 681
Query: 1392 ASGTTQQADIPRQQNSSVAAP 1412
+ + A P Q S+AAP
Sbjct: 682 SPPVSPSATPPSQAPPSLAAP 702
Score = 52.8 bits (125), Expect = 2e-06
Identities = 110/460 (23%), Positives = 162/460 (35%), Gaps = 75/460 (16%)
Query: 973 ARRRSVNEDDNPPSPIGGDMMDSLISQL---QPPPQQQPFPKQPGTSGAYPLTSPPTSYH 1029
ARR + PSP + +++ +P P +P +P T G S S H
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP---RPPTEGPRKSVSS-ASEH 215
Query: 1030 STVNQSP------------------SMMHTQSPGNLHAASSPS--GALRAPS-PASFVPT 1068
ST SP S+ + +P + A S PS G RAP+ P+ P
Sbjct: 216 STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPK 275
Query: 1069 PPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMS 1128
+ + P A+P SSP SPSG P P + +P +P
Sbjct: 276 GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKAR-PVPPPDNAATP---LPATL 331
Query: 1129 PANPSLHSPVPDASHSPRAGTSSQTM-------PTNMPPPRKLPQRSWAASIPTI----L 1177
P +P L +P+P A SP A S QT+ P+ PP P S+ TI +
Sbjct: 332 PPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQV 391
Query: 1178 THSALNILLLPSPTPGLVPGL-AGSYLCSPLERFLGSVIMRRHLQRIIQQETLQLINSNE 1236
HS + L P+P + L A + L SP + S L +Q L + +
Sbjct: 392 PHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHS-----FLTMSPRQTQASLTSPSR 446
Query: 1237 PGVIMFKTDALKCRVALSPKTNQTLQLKVTPENAGQWKPDELQVLEKFFE---------- 1286
P D+ + LS + LQ ++P + P + L+
Sbjct: 447 PA--STPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPL 504
Query: 1287 TRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIMKLELFPDQATQLKWNVQFCLTIPPSA 1346
+ + PP + + +A L P + LE P A LT P
Sbjct: 505 SSLIMPPLETQSSLAPPSLQTPPASLTTP-----PLENLPSLAPPPLQTASAPLTTPHLE 559
Query: 1347 PPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEPVSIIVP 1386
P P P S + T+ PP+ P SI P
Sbjct: 560 TPPCPAPCPLQAPPSPL---------TTPPPETPSSIATP 590
Score = 38.5 bits (88), Expect = 0.048
Identities = 48/174 (27%), Positives = 64/174 (36%), Gaps = 12/174 (6%)
Query: 983 NPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
+PP+ G S + L P P P+ P A L PP+ S Q+P T
Sbjct: 802 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT- 860
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSP-----Y 1097
PG + S P L A +P P PPPS S G A H + S+P Y
Sbjct: 861 -PGPDTSVSGPRLTL-ALAPG---PPPPPSRSPSSTLSGPDLAG-HSSSATSTPEELRGY 914
Query: 1098 TMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSS 1151
G A + P +++ PAA G +P +P P G S
Sbjct: 915 DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGS 968
Score = 37.7 bits (86), Expect = 0.081
Identities = 54/224 (24%), Positives = 72/224 (32%), Gaps = 43/224 (19%)
Query: 1002 PPPQQQPF---------PKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAAS- 1051
PPPQ P P P + PPT T P + +PG S
Sbjct: 827 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 886
Query: 1052 SPSGALRAPSPA---SFVPTPPPSSHGISIGP-GASFASPHGTLD------------PSS 1095
SPS L P A S + P G GP G + ASP + P+
Sbjct: 887 SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAP 946
Query: 1096 PYTMVSPSGRAGNWPGSP------------QVSGPSPAARMPGMSPANPSLHSPVPDASH 1143
P G WP + + GP A PG PS + A+
Sbjct: 947 PLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAA 1006
Query: 1144 SPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLL 1187
AG SS++ P +L + A +++ H LLL
Sbjct: 1007 GAGAGASSRS-----PKQARLGELPLGALQASVVQHLLSRTLLL 1045
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 55.1 bits (131), Expect = 5e-07
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 18/172 (10%)
Query: 1003 PPQQQPFPKQPGT--SGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAP 1060
PP P+ P T A PL PP+ + S+ P + P ++ + RAP
Sbjct: 749 PPDMVAGPRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAP 808
Query: 1061 SPASFVPTPPPS-----SHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGS--P 1113
P + P P+ ++ +G + HG + SSPY V P+ P + P
Sbjct: 809 GPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVV--SSPYVGVGPAPPVAGLPSAPPP 866
Query: 1114 QVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLP 1165
Q SGP A + + S+ +P+P SH T+ + PT PPP P
Sbjct: 867 QFSGPELAMAVRPATTTVDSIQAPIP--SH-----TAPRPNPTPAPPPPCFP 911
Score = 49.7 bits (117), Expect = 2e-05
Identities = 44/140 (31%), Positives = 56/140 (40%), Gaps = 22/140 (15%)
Query: 1000 LQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRA 1059
L PP P+ QPG G PP H+ + P+ Q P H SGAL
Sbjct: 991 LLPPQSPYPYAPQPGVLG-----QPPPPLHTQLYPGPA----QDPLPAH-----SGALPF 1036
Query: 1060 PSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPS 1119
PSP P PP ++ GP S P G ++P T+ PS + P V P+
Sbjct: 1037 PSPGPPQPPHPP----LAYGPAPS-TRPMG--PQAAPLTIRGPSSAGQSTPSPHLVPSPA 1089
Query: 1120 PAARMPGMSPANPSLHSPVP 1139
P+ PG P P P P
Sbjct: 1090 PSPG-PGPVPPRPPAAEPPP 1108
Score = 45.8 bits (107), Expect = 3e-04
Identities = 52/189 (27%), Positives = 62/189 (32%), Gaps = 20/189 (10%)
Query: 1001 QPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAP 1060
QP P QP P Q G P P H P + Q+PG L S AP
Sbjct: 954 QPQPHPQPHPSQ--AFGPQPPQQPLPLQH------PHLFPPQAPGLLPPQSPYP---YAP 1002
Query: 1061 SPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSP 1120
P PPP + GP H P PS P P GP+P
Sbjct: 1003 QPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPF-------PSPGPPQPPHPPLAYGPAP 1055
Query: 1121 AARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHS 1180
+ R G A ++ P +P P+ P P +P R AA P L
Sbjct: 1056 STRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPS--PGPGPVPPRPPAAEPPPCLRRG 1113
Query: 1181 ALNILLLPS 1189
A LL S
Sbjct: 1114 AAAADLLSS 1122
Score = 38.9 bits (89), Expect = 0.036
Identities = 52/218 (23%), Positives = 79/218 (36%), Gaps = 30/218 (13%)
Query: 992 MMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAAS 1051
++D + + PP P P P + + + P + + P +
Sbjct: 707 LLDRELKKKPPPRPTAPKPLLPRREESEAVEA---------GDPPEELRSLPPDMVAGPR 757
Query: 1052 SPSGALRAPSPASFVPTPPPSSHGISIGPGASFAS---PHGTLDPSSPYTMVSPSGRAGN 1108
P L + +P F P+P PS S GPG + S P GT S P ++ P RA
Sbjct: 758 LPDTFLGSATPLHFPPSPFPS----STGPGPHYLSGPLPPGTY--SGPTQLIQP--RAPG 809
Query: 1109 WPGSPQVSGPS--PA-------ARMPGMSPANPSLHSPVPDASHSPR-AGTSSQTMPTNM 1158
P GP+ PA +P SP + + SP +P AG S P
Sbjct: 810 PHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGVGPAPPVAGLPSAPPPQFS 869
Query: 1159 PPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVP 1196
P + R ++ +I + P+PTP P
Sbjct: 870 GPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPP 907
Score = 36.6 bits (83), Expect = 0.18
Identities = 50/187 (26%), Positives = 63/187 (33%), Gaps = 29/187 (15%)
Query: 1042 QSPGNLHAASSPSGALRAPSPASFVPTPP----------------PSSHGISIGPGASFA 1085
Q+P H A P+ P P VP P P+ H S G A F
Sbjct: 888 QAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFP 947
Query: 1086 SPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSP 1145
+P P P+ PS G P PQ P P P P L P ++P
Sbjct: 948 APRIGPQP-QPHPQPHPSQAFG--PQPPQ--QPLPLQHPHLFPPQAPGLLPPQSPYPYAP 1002
Query: 1146 RAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAGSYLCS 1205
+ G Q PPP Q + + HS L PSP P P +Y +
Sbjct: 1003 QPGVLGQ------PPPPLHTQLYPGPAQDPLPAHS--GALPFPSPGPPQPPHPPLAYGPA 1054
Query: 1206 PLERFLG 1212
P R +G
Sbjct: 1055 PSTRPMG 1061
Score = 35.8 bits (81), Expect = 0.31
Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 12/150 (8%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQS 1043
P + G L +QL P P Q P P G +P PP H + P+ +
Sbjct: 1002 PQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGAL-PFPSPGPPQPPHPPLAYGPA--PSTR 1058
Query: 1044 PGNLHAA----SSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTM 1099
P AA PS A ++ VP+P PS GPG P P
Sbjct: 1059 PMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSP-----GPGPVPPRPPAAEPPPCLRRG 1113
Query: 1100 VSPSGRAGNWPGSPQVSGPSPAARMPGMSP 1129
+ + + P S SP P + P
Sbjct: 1114 AAAADLLSSSPESQHGGTQSPGGGQPLLQP 1143
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 53.5 bits (127), Expect = 1e-06
Identities = 56/202 (27%), Positives = 74/202 (36%), Gaps = 15/202 (7%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLT--SPPTSYHS--TVNQSPSMMHTQSPGNLHAASSPSGAL 1057
PPP P P T+ P T SPPT+ S T SP T +P S P+
Sbjct: 1448 PPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1507
Query: 1058 RAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTM-VSPSGRAGNWPGSPQVS 1116
P PAS PP ++ P + +P T PS P T ++P P + S
Sbjct: 1508 ITP-PASTTTLPPTTTPS---PPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1563
Query: 1117 GPSPAARMPG--MSPANPSLHSPVPDA----SHSPRAGTSSQTMPTNMPPPRKLPQRSWA 1170
P P +P+ P+ +P P + P S T T PPP P
Sbjct: 1564 PPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTT 1623
Query: 1171 ASIPTILTHSALNILLLPSPTP 1192
I + + L PSP P
Sbjct: 1624 TPITPPTSTTTLPPTTTPSPPP 1645
Score = 52.8 bits (125), Expect = 2e-06
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PPP P P T+ P T+P +T P+ T SP ++PS PS
Sbjct: 1432 PPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTT--TPSP----PTTTPSPPTTTPS 1485
Query: 1062 PASFVPTPPPSSHGIS------IGPGASFASPHGTLDPSSPYTMVS--PSGRAGNWPGSP 1113
P + T PP + S I P AS + T PS P T + P + P +
Sbjct: 1486 PPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTT 1545
Query: 1114 QVSGPSPAARMPGM---SPANPSLHSPVPDASHSPRAGT--SSQTMPTNMPPPRKLP 1165
++ P+ +P SP + +P P + SP T S T+ T PPP P
Sbjct: 1546 PITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTP 1602
Score = 52.0 bits (123), Expect = 4e-06
Identities = 54/190 (28%), Positives = 67/190 (35%), Gaps = 24/190 (12%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP 1062
PP P P T+ P T+P S +T +P T SP + P +P P
Sbjct: 1401 PPTTTPSPPPTSTTTLPPTTTP--SPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSP-P 1457
Query: 1063 ASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAA 1122
S TPPP++ SP T PS P T SP P P + PSP
Sbjct: 1458 ISTTTTPPPTTT----------PSPP-TTTPSPPTTTPSPPTTTTTTP--PPTTTPSP-- 1502
Query: 1123 RMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSAL 1182
P +P P P + P S T T PPP P I + + L
Sbjct: 1503 --PTTTPITP----PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTL 1556
Query: 1183 NILLLPSPTP 1192
PSP P
Sbjct: 1557 PPTTTPSPPP 1566
Score = 51.6 bits (122), Expect = 5e-06
Identities = 56/219 (25%), Positives = 75/219 (34%), Gaps = 17/219 (7%)
Query: 985 PSPIGGDMMDSLISQLQPPPQQQPFPKQ--PGTSGAYPLTSPPTSYHS---TVNQSPSMM 1039
PSP + PPP P P P T A T PPT+ S T +P
Sbjct: 1477 PSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT 1536
Query: 1040 HTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPS----- 1094
T SP + P+ P + P+PPP++ + P + SP T PS
Sbjct: 1537 TTPSPPTTTPITPPTSTTTLPPTTT--PSPPPTT--TTTPPPTTTPSPPTTTTPSPPTIT 1592
Query: 1095 --SPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQ 1152
+P +PS P + PSP P P + + P S P T+
Sbjct: 1593 TTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP 1652
Query: 1153 TMPTNMPPPRKLPQRS-WAASIPTILTHSALNILLLPSP 1190
T PP P + P T + I PSP
Sbjct: 1653 PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSP 1691
Score = 48.5 bits (114), Expect = 5e-05
Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 997 ISQLQPPPQQQPFPKQPGTSGAYPLT--SPPTSYHSTVNQSPSMMH-TQSPGNLHAASSP 1053
I+ PPP P P T+ P T SPPT+ T S + + T +P ++
Sbjct: 1591 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 1650
Query: 1054 SGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSP 1113
PSP + TP P P + +P T PSSP T +PS P +
Sbjct: 1651 PPPTTTPSPPTTT-TPSP--------PITTTTTPPPTTTPSSPIT-TTPS------PPTT 1694
Query: 1114 QVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASI 1173
++ PSP +P++P + P ++ +P ++ T P+ P P + ++
Sbjct: 1695 TMTTPSPTT-----TPSSPITTTTTPSSTTTPSPPPTTMTTPS--PTTTPSPPTTTMTTL 1747
Query: 1174 PTILTHSALNILLLPSPTPGLVP 1196
P T S L LP P + P
Sbjct: 1748 PPTTTSSPLTTTPLP---PSITP 1767
Score = 43.1 bits (100), Expect = 0.002
Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 12/144 (8%)
Query: 1057 LRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVS 1116
+ PSP + P+PPP+S ++ P + + P T P T SP P P +
Sbjct: 1396 ITTPSPPTTTPSPPPTS-TTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP--PPTT 1452
Query: 1117 GPSP-----AARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRK----LPQR 1167
PSP P +P+ P+ P + SP T++ PT P P P
Sbjct: 1453 TPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPA 1512
Query: 1168 SWAASIPTILTHSALNILLLPSPT 1191
S PT P PT
Sbjct: 1513 STTTLPPTTTPSPPTTTTTTPPPT 1536
Score = 38.9 bits (89), Expect = 0.036
Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 34/155 (21%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PP P P T+ P T+P + +T + + M T SP SSP PS
Sbjct: 1659 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT--TPSSPITTTTTPS 1716
Query: 1062 PASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPA 1121
++ P+PPP+ + +P T PS P T ++
Sbjct: 1717 -STTTPSPPPT----------TMTTPSPTTTPSPPTTTMT-------------------- 1745
Query: 1122 ARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPT 1156
+P + ++P +P+P + P S T PT
Sbjct: 1746 -TLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPT 1779
Score = 37.4 bits (85), Expect = 0.11
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 21/195 (10%)
Query: 1013 PGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPS 1072
P +G T+ P + +TV +P+ TQ+ H +++P L +P TP S
Sbjct: 4165 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQTS 4224
Query: 1073 SHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANP 1132
S P + TL P+ T +P P +P + P+ + +SP
Sbjct: 4225 RSTSS--PLTESTTLLSTLPPAIEMTSTAP-------PSTP--TAPTTTSGGHTLSPPPS 4273
Query: 1133 SLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTP 1192
+ SP + G+SS P P + + +A PT S +I+ T
Sbjct: 4274 TTTSPPGTPTRGTTTGSSS------APTPSTVQTTTTSAWTPTPTPLSTPSII----RTT 4323
Query: 1193 GLVPGLAGSYLCSPL 1207
GL P + +C L
Sbjct: 4324 GLRPYPSSVLICCVL 4338
Score = 32.3 bits (72), Expect = 3.4
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 1109 WPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRS 1168
WP ++ PSP P SP S + P + SP T++ PT P P P +
Sbjct: 1390 WPMDKCITTPSPPTTTP--SPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSP---PITT 1444
Query: 1169 WAASIPTILTHSALNILLLPSPT 1191
PT ++ P PT
Sbjct: 1445 TTTPPPTTTPSPPISTTTTPPPT 1467
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 53.1 bits (126), Expect = 2e-06
Identities = 71/282 (25%), Positives = 115/282 (40%), Gaps = 30/282 (10%)
Query: 984 PPSPIG-GDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
P P G + + ++ LQPP P QP ++GA + + Q+ S + Q
Sbjct: 371 PVQPSGQSEYLQQHVAGLQPPS-----PAQPSSTGAAASPATAATLPVGTGQNASSVGAQ 425
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPS-SPYTMVS 1101
G A+S PS A+ P P+ G + P P T+ P +
Sbjct: 426 LMG---ASSQPSEAM--------APRTGPAQGG-QVAPCQPTGVPPATVGGVVQPCLGPA 473
Query: 1102 PSGRAGNWPGSPQVSGPSPAARMPG----MSPANPSLHSPVPDASHSPRAGTSSQTMPTN 1157
+G+ + P PQ+ G P + +PG + P P++ + VP A P T+S TMP N
Sbjct: 474 GAGQPQSVP-PPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVP-APSVPSVSTTSVTMP-N 530
Query: 1158 MPPP----RKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAGSYLCSPLERFLGS 1213
+P P ++L + + +I+ H L + P +P S + + +G
Sbjct: 531 VPAPLAQSQQLSSHTPVSRSSSIIQHVGLPLAPGTHSAPTSLPQSDLSQFQTQTQPLVGQ 590
Query: 1214 VIMRRHLQRIIQQETLQLINSNEPGVIMFKTDALKCRVALSP 1255
V R + Q L LI N+P V D+L + L+P
Sbjct: 591 VDDTRRKSEPLPQPPLSLIAENKPVVKPPVADSLANPLQLTP 632
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 52.8 bits (125), Expect = 2e-06
Identities = 56/204 (27%), Positives = 75/204 (36%), Gaps = 31/204 (15%)
Query: 985 PSPIGGDMMDSLISQLQPPPQQQPFP---KQPGTSGAYPLTSPPTSYHSTVNQSPSMMHT 1041
P+P + +++Q PP P P KQP +Y SPPT V P +
Sbjct: 786 PAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTP---PVPVPPPTLPK 842
Query: 1042 QSPGNLHAASSPSGALRAPS-----PASFVPTP-PPSSHGISIGPGASFASPHGTLDPSS 1095
Q + A PS PS + F P P PP+ + P + +P S
Sbjct: 843 QQ--SFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQ-----SP 895
Query: 1096 PYTMVSPSGRAGNWP-----------GSPQVSGPSPAARMPGMSPANPSLHSPVPDASHS 1144
P P + + P S V P P + +P P P SP PD S S
Sbjct: 896 PAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGS 955
Query: 1145 PRAGTSSQTMPTNMPPPRKLPQRS 1168
P TS + P PP PQR+
Sbjct: 956 PGKKTSKTSSPGGKKPP-PTPQRN 978
Score = 42.7 bits (99), Expect = 0.003
Identities = 45/182 (24%), Positives = 64/182 (35%), Gaps = 29/182 (15%)
Query: 984 PPSPIGG--DMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHT 1041
PPSP+ ++ + SQ PPP +PP + P+ +
Sbjct: 851 PPSPLSPVPSVVKQIASQFPPPP------------------TPPAMESQPLKPVPANVAP 892
Query: 1042 QSPGNLHAASS--PSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTM 1099
QSP + A PS ++ PSP F P PP SS P + +P P P
Sbjct: 893 QSPPAVKAKPKWQPS-SIPVPSP-DFPPPPPESSLVFPPPPPSPVPAP-----PPPPPPT 945
Query: 1100 VSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMP 1159
SP+ PG SP + P +P S A H S ++ +
Sbjct: 946 ASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFT 1005
Query: 1160 PP 1161
PP
Sbjct: 1006 PP 1007
Score = 40.4 bits (93), Expect = 0.013
Identities = 47/201 (23%), Positives = 70/201 (34%), Gaps = 41/201 (20%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PPP P P PG++ A +P + P + ++ + P+ P
Sbjct: 710 PPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPI 769
Query: 1062 PASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPA 1121
PA P PP P + +P T + T +P P+P
Sbjct: 770 PAPLPPQAPPK-------PLVTIPAPTSTKTVAPVVTQAAP---------------PTPT 807
Query: 1122 ARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSA 1181
+P P+ P AS+ P S T P +PPP Q+S+ A P S
Sbjct: 808 PPVP------PAKKQPAFPASYIP---PSPPTPPVPVPPPTLPKQQSFCAKPPP----SP 854
Query: 1182 LNILLLPSPTPGLVPGLAGSY 1202
L SP P +V +A +
Sbjct: 855 L------SPVPSVVKQIASQF 869
Score = 31.2 bits (69), Expect = 7.6
Identities = 38/153 (24%), Positives = 53/153 (34%), Gaps = 16/153 (10%)
Query: 1048 HAASSPSGALRAPSPASFVPTPP--------PSSHGISIGPGASFASPHGTLDPSSPYTM 1099
+ AS PS L P P P PP PS S G A + T+ +
Sbjct: 619 YTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTI--TRLQNA 676
Query: 1100 VSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMP 1159
SG P P + S ++ + P N + P P +Q P
Sbjct: 677 SQHSGALFKPPTPPVMQSQSVKPQI--LVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCA 734
Query: 1160 PPRKLPQRSWAASIPTILTHSALNILLLPSPTP 1192
P LPQ ++A P + H +I + PTP
Sbjct: 735 P--SLPQ--FSAPPPPLKIHQVQHITQVAPPTP 763
Score = 30.8 bits (68), Expect = 9.9
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 1032 VNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTL 1091
+N ++ T+S + + SS S +++ S +S +P S+H G S P G +
Sbjct: 511 MNYQEALKRTESAYDWTSLSSSS--IKSGSSSSSIPESQ-SNHSNQSDSGVSDTQPAGHV 567
Query: 1092 DPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSS 1151
S + V W Q+ S ARM M+ SL P+ T+S
Sbjct: 568 RSQSIVSSVFSEA----WKRGTQLE-ESSKARMESMNRPYTSLVPPLSPQPKIVTPYTAS 622
Query: 1152 QTMPTNMPPPRKLP 1165
Q P PPP P
Sbjct: 623 QPSPPLPPPPPPPP 636
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 855
Score = 52.4 bits (124), Expect = 3e-06
Identities = 75/266 (28%), Positives = 104/266 (39%), Gaps = 49/266 (18%)
Query: 973 ARRRSVNEDDNPPSPIGGDMMDSLISQL---QPPPQQQPFPKQPGTSGAYPLTSPPTSYH 1029
ARR + PSP + +++ +P P +P +P T G S S H
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP---RPPTEGPRKSVSS-ASEH 215
Query: 1030 STVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHG 1089
ST SP+ S G G L+ P+ S + P S GP A +P
Sbjct: 216 STTEPSPAARRRPSAG---------GGLQRPASRSLSSSATPLSSPARSGPSAR-GTPRA 265
Query: 1090 TLDPSSPY---------TMVSPSGR-----AGNWPGSPQVSGPSPAARM----PGMSPAN 1131
PS P V+P + G SP ++ PSP+A + P PA
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP-LATPSPSAALQSQAPPTLPAT 324
Query: 1132 P-------SLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTI-LTHSAL- 1182
P L +P+P A SP A S QT+P+ PP Q + + PT+ THS L
Sbjct: 325 PHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS--PPATPPSQATTSLGSPTLQATHSFLP 382
Query: 1183 --NILLLPSPTPGLVPGLAGSYLCSP 1206
+ L +P P P LA L +P
Sbjct: 383 SPPLSPLATPPPQAPPALALPPLQAP 408
Score = 50.4 bits (119), Expect = 1e-05
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 36/215 (16%)
Query: 985 PSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSP 1044
P+ + ++ + S PP Q PF P + P +PP+ ++ P + P
Sbjct: 428 PNALAVHLLQAPFSPPPSPPVQAPF-SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 486
Query: 1045 GNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSG 1104
A P S TPPP + P A P P +P + +P
Sbjct: 487 --------------ASPPMSPSATPPPQAPPPLAAPPLQLAKP----PPQAPPALATP-- 526
Query: 1105 RAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPV-PDASHSPRA----GTSSQTMPTNMP 1159
P + PSP A PG +P +PS P+ P A+ P+A +P + P
Sbjct: 527 --------PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP 578
Query: 1160 --PPRKLPQRSWAASIPTILTHSALNILLLPSPTP 1192
P + P+R T ++ L + L P P P
Sbjct: 579 ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 613
Score = 47.0 bits (110), Expect = 1e-04
Identities = 61/220 (27%), Positives = 78/220 (35%), Gaps = 17/220 (7%)
Query: 984 PPSPIGGDMMDSLISQLQPP-PQQQPFPKQPGTSGAYPLT-SPPTSYHSTVNQSPSMMHT 1041
PP+ SL QL P P P P P + P + P S +T SP++ T
Sbjct: 318 PPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQAT 377
Query: 1042 QSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVS 1101
S S P L P P + P P + SP T P +P +
Sbjct: 378 HS----FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 433
Query: 1102 PSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMP-- 1159
+A P SP PSP + P PA+P + P A+ +A S P +P
Sbjct: 434 HLLQA---PFSPP---PSPPVQAPFSPPASPPVS---PSATPPSQAPPSLAAPPLQVPPS 484
Query: 1160 PPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLA 1199
PP P A P A L L P P P LA
Sbjct: 485 PPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALA 524
Score = 44.3 bits (103), Expect = 9e-04
Identities = 54/193 (27%), Positives = 77/193 (39%), Gaps = 22/193 (11%)
Query: 1004 PQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPA 1063
P+ P QP G L PP + +P++ S + A SPS AL++ +P
Sbjct: 263 PRAPAHPSQPKPKGLQALR-PPQVTPPRKDAAPALGPLSS--SPLATPSPSAALQSQAPP 319
Query: 1064 SFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAAR 1123
+ TP SS + A P + PS T+ SP P +P PS A
Sbjct: 320 TLPATPHSSSLTCQLATPLPLAPPSPSAPPSL-QTLPSP-------PATP----PSQATT 367
Query: 1124 MPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAA------SIPTIL 1177
G SP + HS +P SP A Q P PP + P A+ + P+
Sbjct: 368 SLG-SPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQ 426
Query: 1178 THSALNILLLPSP 1190
+AL + LL +P
Sbjct: 427 APNALAVHLLQAP 439
Score = 43.1 bits (100), Expect = 0.002
Identities = 104/430 (24%), Positives = 147/430 (34%), Gaps = 61/430 (14%)
Query: 1011 KQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP-------- 1062
+ GTS P + PP S ++P +T SPG + + SG R P P
Sbjct: 81 RSAGTSSRNPASRPPASGRG--ERAPPAKNT-SPGPVSSPGRASGTTR-PGPLGQKGLRI 136
Query: 1063 ------ASFVPTPPPSSHGISIGPGASFASPH-GTLDPSSPYTMVSPSGRAGNWPGSPQV 1115
A T P +S G + P GT P+ M S AG G P+
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA----MARRSRAAGTEVGLPRP 192
Query: 1116 SG---PSPAARMPGMSPANPSLHS---PVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSW 1169
+ P P P S ++ S HS P P A P AG Q P R L +
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR-----PASRSLSSSAT 247
Query: 1170 AASIPTILTHSALNILLLPS----PTPGLVPGLAGSYLCSPLERFLGSVIMRRHLQRIIQ 1225
S P SA P+ P P + L + P + + +
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP-RKDAAPALGPLSSSPLAT 306
Query: 1226 QETLQLINSNEPGVIMFK--TDALKCRVALSPKTNQTLQLKVTPENAGQWKPDELQVLEK 1283
+ S P + + +L C++A L + P + P LQ L
Sbjct: 307 PSPSAALQSQAPPTLPATPHSSSLTCQLATP--------LPLAPPSPSA--PPSLQTLP- 355
Query: 1284 FFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIMKLELFPDQATQ-LKWNVQFCLTI 1342
+ A PP +A T + L TH + L P QA L
Sbjct: 356 ---SPPATPPSQATTSLGSPTLQA--THSFLPSPPLSPLATPPPQAPPALALPPLQAPPS 410
Query: 1343 PPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEPVSIIVPIIYDMASGTTQQADIP 1402
PP++PP++P TP+ + + L L S PP PV P + + A P
Sbjct: 411 PPASPPLSPLATPSPQAPNALAVHL-LQAPFSPPPSPPVQ--APFSPPASPPVSPSATPP 467
Query: 1403 RQQNSSVAAP 1412
Q S+AAP
Sbjct: 468 SQAPPSLAAP 477
Score = 38.5 bits (88), Expect = 0.048
Identities = 48/174 (27%), Positives = 64/174 (36%), Gaps = 12/174 (6%)
Query: 983 NPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
+PP+ G S + L P P P+ P A L PP+ S Q+P T
Sbjct: 533 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT- 591
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSP-----Y 1097
PG + S P L A +P P PPPS S G A H + S+P Y
Sbjct: 592 -PGPDTSVSGPRLTL-ALAPG---PPPPPSRSPSSTLSGPDLAG-HSSSATSTPEELRGY 645
Query: 1098 TMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSS 1151
G A + P +++ PAA G +P +P P G S
Sbjct: 646 DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGS 699
Score = 37.7 bits (86), Expect = 0.081
Identities = 54/224 (24%), Positives = 72/224 (32%), Gaps = 43/224 (19%)
Query: 1002 PPPQQQPF---------PKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAAS- 1051
PPPQ P P P + PPT T P + +PG S
Sbjct: 558 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 617
Query: 1052 SPSGALRAPSPA---SFVPTPPPSSHGISIGP-GASFASPHGTLD------------PSS 1095
SPS L P A S + P G GP G + ASP + P+
Sbjct: 618 SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAP 677
Query: 1096 PYTMVSPSGRAGNWPGSP------------QVSGPSPAARMPGMSPANPSLHSPVPDASH 1143
P G WP + + GP A PG PS + A+
Sbjct: 678 PLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAA 737
Query: 1144 SPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLL 1187
AG SS++ P +L + A +++ H LLL
Sbjct: 738 GAGAGASSRS-----PKQARLGELPLGALQASVVQHLLSRTLLL 776
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 52.4 bits (124), Expect = 3e-06
Identities = 55/197 (27%), Positives = 71/197 (36%), Gaps = 29/197 (14%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYP--LTSPPTSYHSTVNQSPSMMHT 1041
PP P G D + PP P P P T+ P L PP S P ++
Sbjct: 143 PPGPAPGPPQD-----ISEPPGGSPLPSPPSTAPPPPPLLLEPPPP-PSMAPPPPPVLEA 196
Query: 1042 QSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVS 1101
SP H SSPS P+P F+P PP + P +P P + T +
Sbjct: 197 LSPP--HTLSSPS----IPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLF 250
Query: 1102 PSGRAGNWPGSPQVSGPSPAA--RMPGMSPANP--SLHSPVPDASHSPRAGTSSQTMPTN 1157
P G W ++G A P SPA P S P P+ T P +
Sbjct: 251 PPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE---------PHLTFPRS 301
Query: 1158 MPPPRKLPQRSWAASIP 1174
P P R+ +SIP
Sbjct: 302 FKVPPPTPVRT--SSIP 316
Score = 32.3 bits (72), Expect = 3.4
Identities = 51/192 (26%), Positives = 70/192 (36%), Gaps = 29/192 (15%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVN-QSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PP+ P +P S P P ++ + P+ + T S A +P A
Sbjct: 276 PPRS---PAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATK 332
Query: 1062 PASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTM-----VSP---------SGRAG 1107
A PPS H I P AS P +P P + SP RAG
Sbjct: 333 KAPSRLPLPPSFH---IRP-ASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAG 388
Query: 1108 NWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHS--PRAG---TSSQTMPTNMPPPR 1162
P +P + P PA +P +P P P+P A + P AG T + P P P
Sbjct: 389 TPPPAPPL--PPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 1163 KLPQRSWAASIP 1174
+ A+S P
Sbjct: 447 PPSPENTASSAP 458
Score = 31.2 bits (69), Expect = 7.6
Identities = 44/192 (22%), Positives = 68/192 (35%), Gaps = 32/192 (16%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP 1062
PP+ P P P + +P T P +T+ + + T P ++P A P+
Sbjct: 642 PPKATPEPAIPPKATLWPATPP----KATLGPATPLKATSGP------TTPLKATSGPAI 691
Query: 1063 ASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGS-----PQVSG 1117
AS T P ++ + + P G + + + +PS G S P
Sbjct: 692 ASTATTLPTTTSQLM---AEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGA 748
Query: 1118 PSPAARMPGMSPAN---PSLHSPVPDASH-----------SPRAGTSSQTMPTNMPPPRK 1163
S AA P SP P L+ P S R G + P + P
Sbjct: 749 RSSAAFPPKTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPPG 808
Query: 1164 LPQRSWAASIPT 1175
LP + A++ PT
Sbjct: 809 LPAKPPASAQPT 820
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 52.4 bits (124), Expect = 3e-06
Identities = 55/197 (27%), Positives = 71/197 (36%), Gaps = 29/197 (14%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYP--LTSPPTSYHSTVNQSPSMMHT 1041
PP P G D + PP P P P T+ P L PP S P ++
Sbjct: 143 PPGPAPGPPQD-----ISEPPGGSPLPSPPSTAPPPPPLLLEPPPP-PSMAPPPPPVLEA 196
Query: 1042 QSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVS 1101
SP H SSPS P+P F+P PP + P +P P + T +
Sbjct: 197 LSPP--HTLSSPS----IPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLF 250
Query: 1102 PSGRAGNWPGSPQVSGPSPAA--RMPGMSPANP--SLHSPVPDASHSPRAGTSSQTMPTN 1157
P G W ++G A P SPA P S P P+ T P +
Sbjct: 251 PPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE---------PHLTFPRS 301
Query: 1158 MPPPRKLPQRSWAASIP 1174
P P R+ +SIP
Sbjct: 302 FKVPPPTPVRT--SSIP 316
Score = 32.3 bits (72), Expect = 3.4
Identities = 51/192 (26%), Positives = 70/192 (36%), Gaps = 29/192 (15%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVN-QSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PP+ P +P S P P ++ + P+ + T S A +P A
Sbjct: 276 PPRS---PAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATK 332
Query: 1062 PASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTM-----VSP---------SGRAG 1107
A PPS H I P AS P +P P + SP RAG
Sbjct: 333 KAPSRLPLPPSFH---IRP-ASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAG 388
Query: 1108 NWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHS--PRAG---TSSQTMPTNMPPPR 1162
P +P + P PA +P +P P P+P A + P AG T + P P P
Sbjct: 389 TPPPAPPL--PPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 1163 KLPQRSWAASIP 1174
+ A+S P
Sbjct: 447 PPSPENTASSAP 458
Score = 31.2 bits (69), Expect = 7.6
Identities = 44/192 (22%), Positives = 68/192 (35%), Gaps = 32/192 (16%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP 1062
PP+ P P P + +P T P +T+ + + T P ++P A P+
Sbjct: 642 PPKATPEPAIPPKATLWPATPP----KATLGPATPLKATSGP------TTPLKATSGPAI 691
Query: 1063 ASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGS-----PQVSG 1117
AS T P ++ + + P G + + + +PS G S P
Sbjct: 692 ASTATTLPTTTSQLM---AEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGA 748
Query: 1118 PSPAARMPGMSPAN---PSLHSPVPDASH-----------SPRAGTSSQTMPTNMPPPRK 1163
S AA P SP P L+ P S R G + P + P
Sbjct: 749 RSSAAFPPKTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPPG 808
Query: 1164 LPQRSWAASIPT 1175
LP + A++ PT
Sbjct: 809 LPAKPPASAQPT 820
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sapiens]
Length = 1188
Score = 52.4 bits (124), Expect = 3e-06
Identities = 55/197 (27%), Positives = 71/197 (36%), Gaps = 29/197 (14%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYP--LTSPPTSYHSTVNQSPSMMHT 1041
PP P G D + PP P P P T+ P L PP S P ++
Sbjct: 143 PPGPAPGPPQD-----ISEPPGGSPLPSPPSTAPPPPPLLLEPPPP-PSMAPPPPPVLEA 196
Query: 1042 QSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVS 1101
SP H SSPS P+P F+P PP + P +P P + T +
Sbjct: 197 LSPP--HTLSSPS----IPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLF 250
Query: 1102 PSGRAGNWPGSPQVSGPSPAA--RMPGMSPANP--SLHSPVPDASHSPRAGTSSQTMPTN 1157
P G W ++G A P SPA P S P P+ T P +
Sbjct: 251 PPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE---------PHLTFPRS 301
Query: 1158 MPPPRKLPQRSWAASIP 1174
P P R+ +SIP
Sbjct: 302 FKVPPPTPVRT--SSIP 316
Score = 32.3 bits (72), Expect = 3.4
Identities = 51/192 (26%), Positives = 70/192 (36%), Gaps = 29/192 (15%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVN-QSPSMMHTQSPGNLHAASSPSGALRAPS 1061
PP+ P +P S P P ++ + P+ + T S A +P A
Sbjct: 276 PPRS---PAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATK 332
Query: 1062 PASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTM-----VSP---------SGRAG 1107
A PPS H I P AS P +P P + SP RAG
Sbjct: 333 KAPSRLPLPPSFH---IRP-ASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAG 388
Query: 1108 NWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHS--PRAG---TSSQTMPTNMPPPR 1162
P +P + P PA +P +P P P+P A + P AG T + P P P
Sbjct: 389 TPPPAPPL--PPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 1163 KLPQRSWAASIP 1174
+ A+S P
Sbjct: 447 PPSPENTASSAP 458
Score = 31.2 bits (69), Expect = 7.6
Identities = 44/192 (22%), Positives = 68/192 (35%), Gaps = 32/192 (16%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP 1062
PP+ P P P + +P T P +T+ + + T P ++P A P+
Sbjct: 642 PPKATPEPAIPPKATLWPATPP----KATLGPATPLKATSGP------TTPLKATSGPAI 691
Query: 1063 ASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGS-----PQVSG 1117
AS T P ++ + + P G + + + +PS G S P
Sbjct: 692 ASTATTLPTTTSQLM---AEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGA 748
Query: 1118 PSPAARMPGMSPAN---PSLHSPVPDASH-----------SPRAGTSSQTMPTNMPPPRK 1163
S AA P SP P L+ P S R G + P + P
Sbjct: 749 RSSAAFPPKTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPPG 808
Query: 1164 LPQRSWAASIPT 1175
LP + A++ PT
Sbjct: 809 LPAKPPASAQPT 820
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 52.4 bits (124), Expect = 3e-06
Identities = 70/220 (31%), Positives = 88/220 (40%), Gaps = 36/220 (16%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPF-PKQPGTSGAYPLTSPPTSYHSTV---NQS--PS 1037
PP +G P QQQP QPG A P PP H NQ PS
Sbjct: 1003 PPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPG---AVPPGVPPPGPHGPSPFPNQQTPPS 1059
Query: 1038 MMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPY 1097
MM PG+ H P A AP F PPP SI P G+L S
Sbjct: 1060 MMPGAVPGSGH----PGVAGNAPLGLPFGMPPPPPPPAPSI-------IPFGSLADSISI 1108
Query: 1098 TMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTN 1157
+ +P G+ P G P +P +S ANP LH +P ++ TMP++
Sbjct: 1109 NLPAPPNLHGHHHHLPFAPGTLPPPNLP-VSMANP-LHPNLP----------ATTTMPSS 1156
Query: 1158 MPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPG 1197
+P L S AA P I+ +A+ LLPS +P PG
Sbjct: 1157 LPLGPGL--GSAAAQSPAIV--AAVQGNLLPSASPLPDPG 1192
Score = 51.2 bits (121), Expect = 7e-06
Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 1070 PPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQ---VSGPSPAARMPG 1126
PP+ HG+++ P + +P G+ P G+AG+ G Q P P A PG
Sbjct: 980 PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPG 1039
Query: 1127 MSPANPSLHSP--------------VPDASHSPRAGTSSQTMPTNMPPPRKLPQRS 1168
+ P P SP VP + H AG + +P MPPP P S
Sbjct: 1040 VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPS 1095
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 52.4 bits (124), Expect = 3e-06
Identities = 66/233 (28%), Positives = 86/233 (36%), Gaps = 38/233 (16%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPK-QPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
PPSP PPP P P QP T A ++P + Q P H+
Sbjct: 257 PPSP-------------HPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSL 303
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGIS-IGPGASFASPHGTLDPSSPYTMVS 1101
G L L+ P P PP +S G + +G + A PH +L + S
Sbjct: 304 QAGPL---------LQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPA-----S 349
Query: 1102 PSGRAGNWPGSPQVSGPSPAARMPGMSP--ANPSLHSPVPDA-SHSPR-AGTSSQTMPTN 1157
S P Q P+P A MP + P P P P A H P +G S +M N
Sbjct: 350 QSALQSQQPPREQPLPPAPLA-MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN 408
Query: 1158 MPPPRKL-PQRSWAASIPTILTHSALNILLLPSP---TPGLVPGLAGSYLCSP 1206
+PPP L P S + P L ++ P +P PGL S P
Sbjct: 409 LPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPP 461
Score = 50.1 bits (118), Expect = 2e-05
Identities = 64/215 (29%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 999 QLQPPPQQQPFPKQPGTSGAYP----LTSP-PTSYHSTVNQSPSMMHTQSPGNLHAASSP 1053
Q QPP Q P P S A P L +P PT + V S +Q+P A ++P
Sbjct: 181 QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 240
Query: 1054 --------SGALRAPSPASFVPTPPPSSH-------GISIGPGA-SFASP--HGTLDPSS 1095
+ AL P S P P PS H G + P A S A P HG P
Sbjct: 241 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQ-GPPG 299
Query: 1096 PYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMP 1155
P+++ +G PG PQ G P A G +P SP H+ +SQ+
Sbjct: 300 PHSL--QAGPLLQHPGPPQPFGLPPQASQ-GQAPLGT---SPAAAYPHTSLQLPASQSAL 353
Query: 1156 TNMPPPRKLPQRSWAASIPTILTHSALNILLLPSP 1190
+ PPR+ P ++P I I LP+P
Sbjct: 354 QSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAP 388
Score = 38.9 bits (89), Expect = 0.036
Identities = 39/142 (27%), Positives = 48/142 (33%), Gaps = 23/142 (16%)
Query: 1000 LQPPPQQQPFPKQPGTSGAY---------PLTSPPTSYHSTVNQSPSMMHTQSPGNLHAA 1050
LQ PQ QP P P P + PPT H Q P H PG
Sbjct: 434 LQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPI 493
Query: 1051 SSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHG---TLDPSSPYTMVSPSGRAG 1107
+ P+ PS ++ PP+ G S P S A+ G S P V A
Sbjct: 494 TPPT----CPSTST-----PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEAL 544
Query: 1108 NWPGSPQVSGPSPAARMPGMSP 1129
+ P+ P P R P P
Sbjct: 545 DDAEEPE--SPPPPPRSPSPEP 564
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 52.4 bits (124), Expect = 3e-06
Identities = 66/233 (28%), Positives = 86/233 (36%), Gaps = 38/233 (16%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPK-QPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
PPSP PPP P P QP T A ++P + Q P H+
Sbjct: 811 PPSP-------------HPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSL 857
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGIS-IGPGASFASPHGTLDPSSPYTMVS 1101
G L L+ P P PP +S G + +G + A PH +L + S
Sbjct: 858 QAGPL---------LQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPA-----S 903
Query: 1102 PSGRAGNWPGSPQVSGPSPAARMPGMSP--ANPSLHSPVPDA-SHSPR-AGTSSQTMPTN 1157
S P Q P+P A MP + P P P P A H P +G S +M N
Sbjct: 904 QSALQSQQPPREQPLPPAPLA-MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN 962
Query: 1158 MPPPRKL-PQRSWAASIPTILTHSALNILLLPSP---TPGLVPGLAGSYLCSP 1206
+PPP L P S + P L ++ P +P PGL S P
Sbjct: 963 LPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPP 1015
Score = 50.1 bits (118), Expect = 2e-05
Identities = 64/215 (29%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 999 QLQPPPQQQPFPKQPGTSGAYP----LTSP-PTSYHSTVNQSPSMMHTQSPGNLHAASSP 1053
Q QPP Q P P S A P L +P PT + V S +Q+P A ++P
Sbjct: 735 QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794
Query: 1054 --------SGALRAPSPASFVPTPPPSSH-------GISIGPGA-SFASP--HGTLDPSS 1095
+ AL P S P P PS H G + P A S A P HG P
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQ-GPPG 853
Query: 1096 PYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMP 1155
P+++ +G PG PQ G P A G +P SP H+ +SQ+
Sbjct: 854 PHSL--QAGPLLQHPGPPQPFGLPPQASQ-GQAPLGT---SPAAAYPHTSLQLPASQSAL 907
Query: 1156 TNMPPPRKLPQRSWAASIPTILTHSALNILLLPSP 1190
+ PPR+ P ++P I I LP+P
Sbjct: 908 QSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAP 942
Score = 38.9 bits (89), Expect = 0.036
Identities = 39/142 (27%), Positives = 48/142 (33%), Gaps = 23/142 (16%)
Query: 1000 LQPPPQQQPFPKQPGTSGAY---------PLTSPPTSYHSTVNQSPSMMHTQSPGNLHAA 1050
LQ PQ QP P P P + PPT H Q P H PG
Sbjct: 988 LQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPI 1047
Query: 1051 SSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHG---TLDPSSPYTMVSPSGRAG 1107
+ P+ PS ++ PP+ G S P S A+ G S P V A
Sbjct: 1048 TPPT----CPSTST-----PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEAL 1098
Query: 1108 NWPGSPQVSGPSPAARMPGMSP 1129
+ P+ P P R P P
Sbjct: 1099 DDAEEPE--SPPPPPRSPSPEP 1118
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 52.4 bits (124), Expect = 3e-06
Identities = 66/233 (28%), Positives = 86/233 (36%), Gaps = 38/233 (16%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPK-QPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
PPSP PPP P P QP T A ++P + Q P H+
Sbjct: 811 PPSP-------------HPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSL 857
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGIS-IGPGASFASPHGTLDPSSPYTMVS 1101
G L L+ P P PP +S G + +G + A PH +L + S
Sbjct: 858 QAGPL---------LQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPA-----S 903
Query: 1102 PSGRAGNWPGSPQVSGPSPAARMPGMSP--ANPSLHSPVPDA-SHSPR-AGTSSQTMPTN 1157
S P Q P+P A MP + P P P P A H P +G S +M N
Sbjct: 904 QSALQSQQPPREQPLPPAPLA-MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN 962
Query: 1158 MPPPRKL-PQRSWAASIPTILTHSALNILLLPSP---TPGLVPGLAGSYLCSP 1206
+PPP L P S + P L ++ P +P PGL S P
Sbjct: 963 LPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPP 1015
Score = 50.1 bits (118), Expect = 2e-05
Identities = 64/215 (29%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 999 QLQPPPQQQPFPKQPGTSGAYP----LTSP-PTSYHSTVNQSPSMMHTQSPGNLHAASSP 1053
Q QPP Q P P S A P L +P PT + V S +Q+P A ++P
Sbjct: 735 QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794
Query: 1054 --------SGALRAPSPASFVPTPPPSSH-------GISIGPGA-SFASP--HGTLDPSS 1095
+ AL P S P P PS H G + P A S A P HG P
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQ-GPPG 853
Query: 1096 PYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMP 1155
P+++ +G PG PQ G P A G +P SP H+ +SQ+
Sbjct: 854 PHSL--QAGPLLQHPGPPQPFGLPPQASQ-GQAPLGT---SPAAAYPHTSLQLPASQSAL 907
Query: 1156 TNMPPPRKLPQRSWAASIPTILTHSALNILLLPSP 1190
+ PPR+ P ++P I I LP+P
Sbjct: 908 QSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAP 942
Score = 38.9 bits (89), Expect = 0.036
Identities = 39/142 (27%), Positives = 48/142 (33%), Gaps = 23/142 (16%)
Query: 1000 LQPPPQQQPFPKQPGTSGAY---------PLTSPPTSYHSTVNQSPSMMHTQSPGNLHAA 1050
LQ PQ QP P P P + PPT H Q P H PG
Sbjct: 988 LQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPI 1047
Query: 1051 SSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHG---TLDPSSPYTMVSPSGRAG 1107
+ P+ PS ++ PP+ G S P S A+ G S P V A
Sbjct: 1048 TPPT----CPSTST-----PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEAL 1098
Query: 1108 NWPGSPQVSGPSPAARMPGMSP 1129
+ P+ P P R P P
Sbjct: 1099 DDAEEPE--SPPPPPRSPSPEP 1118
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 52.0 bits (123), Expect = 4e-06
Identities = 70/241 (29%), Positives = 96/241 (39%), Gaps = 32/241 (13%)
Query: 983 NPPSPIGGDMMDSLISQLQPP-PQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHT 1041
+PPS G + S + PP PQ+ P G+ P + PP V +P + +
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPP-----VPSTPRPIQS 196
Query: 1042 QSPGNLHAASSPSGALRAPSPASFVPTPPP--SSHGISIGPGASFASPHGTLDPSSPYTM 1099
SP N + P G R PSP PTPPP + G ++G G+ SP + P S
Sbjct: 197 -SPHNRGSPPVPGGP-RQPSPG---PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP 251
Query: 1100 VSPS-GRA--GNWPGSPQVSGPSPAARMPGMSPANPSLHSP-VPDASHSPRAGTSSQTMP 1155
+ P+ RA P P G P+ + P P + P VP +PR SSQ
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS---TPRPSASSQA-- 306
Query: 1156 TNMPPPRKLPQRSWAASIPTILTHS-------ALNILLLPSPTPGLVPGLAGSYLCSPLE 1208
PPP P R +P + + N+ L S P PG +G P E
Sbjct: 307 ---PPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSE 363
Query: 1209 R 1209
R
Sbjct: 364 R 364
Score = 47.0 bits (110), Expect = 1e-04
Identities = 51/192 (26%), Positives = 71/192 (36%), Gaps = 30/192 (15%)
Query: 989 GGDMMDSLISQLQPPPQQQPFPKQPGTS--GAYPLTSPPT----SYHSTVNQSPSMMHTQ 1042
GG + S +S P + P P P + P PP S H P + +
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNK 291
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFAS------PHGTLDPSSP 1096
P + + PS + +AP P PPPS G P +S + P L SS
Sbjct: 292 PP--VPSTPRPSASSQAPPPP-----PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS 344
Query: 1097 YTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPT 1156
+ GR+G P P P P PG S P+P R G++S+ +P
Sbjct: 345 TPPLPSPGRSGPLPPPPSERPPPPVRDPPGRS-------GPLPPPPPVSRNGSTSRALPA 397
Query: 1157 NMPPPRKLPQRS 1168
+LP RS
Sbjct: 398 T----PQLPSRS 405
Score = 45.8 bits (107), Expect = 3e-04
Identities = 50/183 (27%), Positives = 62/183 (33%), Gaps = 29/183 (15%)
Query: 976 RSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQ-----PFPKQPGTSGAYPLTSPPTSYHS 1030
R++++ PP P G+ + PPP Q P +P S P PP S
Sbjct: 258 RALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS--- 314
Query: 1031 TVNQSPSMMHTQSPGNLHAASSP-------SGALRAPSPASFVPTPPPSSHGISIGPGAS 1083
P + S GN P S PSP P PPP S P
Sbjct: 315 --RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSE----RPPPP 368
Query: 1084 FASPHGTLDPSSPYTMVSPSGRAGN-WPGSPQ------VSGPSPAARMPGMSPANPSLHS 1136
P G P P VS +G P +PQ V P R P + P PS +
Sbjct: 369 VRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPR-PPLPPDRPSAGA 427
Query: 1137 PVP 1139
P P
Sbjct: 428 PPP 430
Score = 40.4 bits (93), Expect = 0.013
Identities = 37/134 (27%), Positives = 47/134 (35%), Gaps = 19/134 (14%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPK---QPGTSGAYPLTSPPTSYHSTVNQSPSMMH 1040
PP P G L PPP ++P P PG SG P P + ST P+
Sbjct: 346 PPLPSPGRS-----GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQ 400
Query: 1041 TQSPGNLHAA-SSPSGALRAPSPASFVPTPPPSSHGISIG----------PGASFASPHG 1089
S + + S P L P++ P PPP S I G + P
Sbjct: 401 LPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPIS 460
Query: 1090 TLDPSSPYTMVSPS 1103
L P PY + S
Sbjct: 461 DLPPPEPYVQTTKS 474
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 52.0 bits (123), Expect = 4e-06
Identities = 70/241 (29%), Positives = 96/241 (39%), Gaps = 32/241 (13%)
Query: 983 NPPSPIGGDMMDSLISQLQPP-PQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHT 1041
+PPS G + S + PP PQ+ P G+ P + PP V +P + +
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPP-----VPSTPRPIQS 196
Query: 1042 QSPGNLHAASSPSGALRAPSPASFVPTPPP--SSHGISIGPGASFASPHGTLDPSSPYTM 1099
SP N + P G R PSP PTPPP + G ++G G+ SP + P S
Sbjct: 197 -SPHNRGSPPVPGGP-RQPSPG---PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP 251
Query: 1100 VSPS-GRA--GNWPGSPQVSGPSPAARMPGMSPANPSLHSP-VPDASHSPRAGTSSQTMP 1155
+ P+ RA P P G P+ + P P + P VP +PR SSQ
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS---TPRPSASSQA-- 306
Query: 1156 TNMPPPRKLPQRSWAASIPTILTHS-------ALNILLLPSPTPGLVPGLAGSYLCSPLE 1208
PPP P R +P + + N+ L S P PG +G P E
Sbjct: 307 ---PPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSE 363
Query: 1209 R 1209
R
Sbjct: 364 R 364
Score = 47.0 bits (110), Expect = 1e-04
Identities = 51/192 (26%), Positives = 71/192 (36%), Gaps = 30/192 (15%)
Query: 989 GGDMMDSLISQLQPPPQQQPFPKQPGTS--GAYPLTSPPT----SYHSTVNQSPSMMHTQ 1042
GG + S +S P + P P P + P PP S H P + +
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNK 291
Query: 1043 SPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFAS------PHGTLDPSSP 1096
P + + PS + +AP P PPPS G P +S + P L SS
Sbjct: 292 PP--VPSTPRPSASSQAPPPP-----PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS 344
Query: 1097 YTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPT 1156
+ GR+G P P P P PG S P+P R G++S+ +P
Sbjct: 345 TPPLPSPGRSGPLPPPPSERPPPPVRDPPGRS-------GPLPPPPPVSRNGSTSRALPA 397
Query: 1157 NMPPPRKLPQRS 1168
+LP RS
Sbjct: 398 T----PQLPSRS 405
Score = 45.8 bits (107), Expect = 3e-04
Identities = 50/183 (27%), Positives = 62/183 (33%), Gaps = 29/183 (15%)
Query: 976 RSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQ-----PFPKQPGTSGAYPLTSPPTSYHS 1030
R++++ PP P G+ + PPP Q P +P S P PP S
Sbjct: 258 RALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS--- 314
Query: 1031 TVNQSPSMMHTQSPGNLHAASSP-------SGALRAPSPASFVPTPPPSSHGISIGPGAS 1083
P + S GN P S PSP P PPP S P
Sbjct: 315 --RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSE----RPPPP 368
Query: 1084 FASPHGTLDPSSPYTMVSPSGRAGN-WPGSPQ------VSGPSPAARMPGMSPANPSLHS 1136
P G P P VS +G P +PQ V P R P + P PS +
Sbjct: 369 VRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPR-PPLPPDRPSAGA 427
Query: 1137 PVP 1139
P P
Sbjct: 428 PPP 430
Score = 40.4 bits (93), Expect = 0.013
Identities = 37/134 (27%), Positives = 47/134 (35%), Gaps = 19/134 (14%)
Query: 984 PPSPIGGDMMDSLISQLQPPPQQQPFPK---QPGTSGAYPLTSPPTSYHSTVNQSPSMMH 1040
PP P G L PPP ++P P PG SG P P + ST P+
Sbjct: 346 PPLPSPGRS-----GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQ 400
Query: 1041 TQSPGNLHAA-SSPSGALRAPSPASFVPTPPPSSHGISIG----------PGASFASPHG 1089
S + + S P L P++ P PPP S I G + P
Sbjct: 401 LPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPIS 460
Query: 1090 TLDPSSPYTMVSPS 1103
L P PY + S
Sbjct: 461 DLPPPEPYVQTTKS 474
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 52.0 bits (123), Expect = 4e-06
Identities = 57/211 (27%), Positives = 81/211 (38%), Gaps = 20/211 (9%)
Query: 972 DARRRSVNEDDNPPSPIGGDMMDSLI---SQLQPPPQQQPFPKQPGTSGAYPLTSPPTSY 1028
+A R S ++ P SP+ + S S L PPP++ P P +S PL P S
Sbjct: 463 EASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSP 522
Query: 1029 HSTVNQSPSMMHTQSPGNLHAASSP--SGALRAPSPASFVPTPPPSSHGISIGPGASFAS 1086
SP++ SP + SP + +P P +PPP + +S P S S
Sbjct: 523 PEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMS 582
Query: 1087 PHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASH-SP 1145
P P SP P + +P P P P S SP P+AS SP
Sbjct: 583 PPPEESPMSP-----PPEASRLFP---------PFEESPLSPPPEESPLSPPPEASRLSP 628
Query: 1146 RAGTSSQTMPTNMPPPRKLPQRSWAASIPTI 1176
S + P P P+ S + +P +
Sbjct: 629 PPEDSPMSPPPEESPMSPPPEVSRLSPLPVV 659
Score = 45.1 bits (105), Expect = 5e-04
Identities = 72/278 (25%), Positives = 94/278 (33%), Gaps = 69/278 (24%)
Query: 983 NPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQ 1042
+PP + ++S+L PPP++ P P S P + PP + S ++ P T
Sbjct: 645 SPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEES---PTSPPPEA--SRLSPPPEDSPTS 699
Query: 1043 SPGNLHAASSP--SGALRAP---SPASFVPTPP---PSSHGISIGPGASFASPHGTLDPS 1094
P AS P + P SP +P P P S G + P PH + P
Sbjct: 700 PPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPE--EPHLSPRPE 757
Query: 1095 SPYTMVSPSGRAGNWPGSPQVSGP-----------SPAARMPGMSPANPSLH-------- 1135
P+ +SP + SPQ P SP A P +SP LH
Sbjct: 758 EPH--LSPQAEEPHL--SPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEP 813
Query: 1136 -----------SPVPDASH----------SPRAGTSSQTMPTNMPP----PRKLPQRSWA 1170
SP P+ SH SPR S + PP P K P+
Sbjct: 814 HLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQ 873
Query: 1171 ASIPTILTHSALNILLLPSPTPGLVPGLAGSYLCSPLE 1208
P L L P P L P L L P E
Sbjct: 874 CPAPEELP------LFPPPGEPSLSPLLGEPALSEPGE 905
Score = 41.6 bits (96), Expect = 0.006
Identities = 60/220 (27%), Positives = 78/220 (35%), Gaps = 25/220 (11%)
Query: 998 SQLQPPPQQQPFPKQPGTS------GAYPLTSPPTSYHST--VNQSP-SMMHTQSPGNLH 1048
S L PPP++ P P S P + P + H + + +SP S +SP +
Sbjct: 447 SPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPP 506
Query: 1049 AASSPSGALRAP--SPASFVPTPPPSSHGISIGPGASFASP---HGTLDPSSPYTMVSPS 1103
SSP L SP P P +S P AS SP L P SP
Sbjct: 507 PESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPP 566
Query: 1104 GRAGNWPGSPQVSGPSPAARMPGMSPA----------NPSLHSPVPDASH-SPRAGTSSQ 1152
A P+ S SP MSP S SP P+ S SP S
Sbjct: 567 PEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRL 626
Query: 1153 TMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTP 1192
+ P P P+ S + P + S L ++ SP P
Sbjct: 627 SPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPP 666
Score = 41.6 bits (96), Expect = 0.006
Identities = 50/186 (26%), Positives = 67/186 (36%), Gaps = 17/186 (9%)
Query: 998 SQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASS-PSGA 1056
S L PPP++ P P S P PP S ++ P P + S P +
Sbjct: 606 SPLSPPPEESPLSPPPEASRLSP---PPED--SPMSPPPEESPMSPPPEVSRLSPLPVVS 660
Query: 1057 LRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVS 1116
+P P +PPP S P AS SP P+SP SP A P +S
Sbjct: 661 RLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSP---ASPPPEDSLMS 717
Query: 1117 GP------SPAARMPGMSPANPSLH-SPVPDASH-SPRAGTSSQTMPTNMPPPRKLPQRS 1168
P P P + P + H SP P+ H SPR + P P+
Sbjct: 718 LPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEP 777
Query: 1169 WAASIP 1174
++P
Sbjct: 778 CLCAVP 783
Score = 38.5 bits (88), Expect = 0.048
Identities = 54/199 (27%), Positives = 73/199 (36%), Gaps = 32/199 (16%)
Query: 1010 PKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTP 1069
P QPG G+ P + PT + + +P+ + T + G L PA VP P
Sbjct: 2107 PPQPGALGSPPPAAAPTIFIGSPT-TPAGLSTSADGFLKP------------PAGSVPGP 2153
Query: 1070 PPSSHGISIGPGASFASPHGTLDPSSPYTMVS--PSGRAGNWPGSPQVSGPSPAARMPGM 1127
PG F L P P + S P G A +P P+ +P P
Sbjct: 2154 D--------SPGELFLK----LPPQVPAQVPSQDPFGLAPAYPLEPRFP-TAPPTYPPYP 2200
Query: 1128 SPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLL 1187
SP P+ AS P AG + T PR P P +L+ L +
Sbjct: 2201 SPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRC---PSLDNLAV 2257
Query: 1188 PSPTPGLVPGLAGSYLCSP 1206
P +PG+ G A L SP
Sbjct: 2258 PE-SPGVGGGKASEPLLSP 2275
Score = 38.5 bits (88), Expect = 0.048
Identities = 53/195 (27%), Positives = 65/195 (33%), Gaps = 46/195 (23%)
Query: 1001 QPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSP-SMMHTQSP-------GNLHAASS 1052
QPP +P P P + A P S P+ S V SP S +QSP S
Sbjct: 2380 QPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSP 2439
Query: 1053 PSGALRAPSPASFVPTPPPS----------------------------SHGISIGPGASF 1084
+ ++P P S P+ P S S G P A
Sbjct: 2440 VTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALP 2499
Query: 1085 ASPHGTLDPSSPYTMVSPSGRAGNWPGSPQ----VSGPSPAARMPGMSPANPSLHSPVPD 1140
A P G L PSG+ N+ SP V PSP + PSL PVP
Sbjct: 2500 AGPAGELHAK------VPSGQPPNFVRSPGTGAFVGTPSPMRFTFPQAVGEPSLKPPVPQ 2553
Query: 1141 ASHSPRAGTSSQTMP 1155
P G +S P
Sbjct: 2554 PGLPPPHGINSHFGP 2568
Score = 37.4 bits (85), Expect = 0.11
Identities = 44/163 (26%), Positives = 57/163 (34%), Gaps = 37/163 (22%)
Query: 1000 LQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRA 1059
L PPP++ P P S TSPP P + +
Sbjct: 440 LLPPPEESPLSPPPEESP----TSPP---------------------------PEASRLS 468
Query: 1060 PSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGS-PQVSGP 1118
P P +P P + +S S SP P SP SP P S P+ S P
Sbjct: 469 PPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPP 528
Query: 1119 SPAARMPGMSPANPS-LHSPVPDASHSPRAGTSSQTMPTNMPP 1160
SPA P P S L P ++ SP + +PT+ PP
Sbjct: 529 SPALETPLSPPPEASPLSPPFEESPLSP----PPEELPTSPPP 567
Score = 35.8 bits (81), Expect = 0.31
Identities = 36/140 (25%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTS-----PPTSYHS------TVNQSPSMMHTQSPGNLHAA 1050
P P + FP+ G P PP +S T+ + S +T + GN H +
Sbjct: 2531 PSPMRFTFPQAVGEPSLKPPVPQPGLPPPHGINSHFGPGPTLGKPQSTNYTVATGNFHPS 2590
Query: 1051 SSPSGALRAPSPASF--VPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGN 1108
SP G + S+ P PPS G+ HG S + V G
Sbjct: 2591 GSPLGPSSGSTGESYGLSPLRPPSVLPPPAPDGSLPYLSHGASQRSGITSPVEKREDPGT 2650
Query: 1109 WPGSPQVSGPSPAARMPGMS 1128
GS + P + PGMS
Sbjct: 2651 GMGSSLATAELPGTQDPGMS 2670
Score = 33.1 bits (74), Expect = 2.0
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 992 MMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPG--NLHA 1049
+M + Q Q Q P+ ++PGT TSP Q Q+ L A
Sbjct: 4226 LMQRQLQQSQAVRQTPPY-QEPGTQ-----TSPLQGLLGCQPQLGGFPGPQTGPLQELGA 4279
Query: 1050 ASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGR---- 1105
P G R P+P + T P +GP P +P P + SPS +
Sbjct: 4280 GPRPQGPPRLPAPPGALSTGPV------LGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTE 4333
Query: 1106 ---AGNWPGSPQVSGPSPAARMPGMSPANPSL 1134
PG+P+ GP+ +SPA L
Sbjct: 4334 AQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQL 4365
Score = 31.6 bits (70), Expect = 5.8
Identities = 45/177 (25%), Positives = 66/177 (37%), Gaps = 26/177 (14%)
Query: 996 LISQLQPPPQQQPFPKQPGTSGAYP----LTSPPTSYHSTVNQSPS-------MMHTQSP 1044
L+S P + FP+ P +G P P +SP P
Sbjct: 4806 LLSMKIPNSYEVLFPESPARAGTEPKKGEAEGPGGKEKGLEGKSPDTGPDWLKQFDAVLP 4865
Query: 1045 G-NLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPS 1103
G L + L+ SPA PT ++ +S ++P +PS P + ++PS
Sbjct: 4866 GYTLKSQLDILSLLKQESPAPEPPTQHSYTYNVSNLDVRQLSAPPPE-EPSPPPSPLAPS 4924
Query: 1104 GRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPP 1160
P SP P +P A P + SP+P AS SP S++ P PP
Sbjct: 4925 ------PASPPTE---PLVELPTEPLAEPPVPSPLPLAS-SPE---SARPKPRARPP 4968
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 51.6 bits (122), Expect = 5e-06
Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 26/184 (14%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTS-------PPTSYHSTVNQSPSMMHTQSPGNLHAASSPS 1054
PPP P P+ P ++ P S PT YH+ + S M PG A P
Sbjct: 161 PPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPG----APPPH 216
Query: 1055 GALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYT--MVSPSGRAGNWPGS 1112
L + PP G G +S P+G P T VS SG +G P
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKG--GGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTK 274
Query: 1113 P--------QVSGPSPAARMPGMSP--ANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPR 1162
P + P A P ++P P P+ +AS SP G +Q +P ++P P
Sbjct: 275 PPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP-PGLGAQPLPGHLPSPH 333
Query: 1163 KLPQ 1166
+ Q
Sbjct: 334 AMGQ 337
Score = 41.2 bits (95), Expect = 0.007
Identities = 56/209 (26%), Positives = 76/209 (36%), Gaps = 31/209 (14%)
Query: 984 PPSPIGGDMMDSLIS----QLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMM 1039
P P GG S+ + PPP G SGA P T PPT+
Sbjct: 232 PMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPP-TKPPTT------------ 278
Query: 1040 HTQSPGNLHAASSPSGALRAPSPASFVPTPP---PSSHGISIGPGASFASPHGTLDPSSP 1096
GNL +A P+ P +P PP P ++ + PG G L SP
Sbjct: 279 -PVGGGNLPSAPPPA---NFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHL--PSP 332
Query: 1097 YTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPA-NPSLHSPVPDASHSPRAGTSSQTMP 1155
+ M G P PSP + P S A P + P +S S A +SS +
Sbjct: 333 HAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSS 392
Query: 1156 TN----MPPPRKLPQRSWAASIPTILTHS 1180
++ P + LP + PT L+ S
Sbjct: 393 SSSASPFPASQALPSYPHSFPPPTSLSVS 421
Score = 38.1 bits (87), Expect = 0.062
Identities = 49/199 (24%), Positives = 64/199 (32%), Gaps = 39/199 (19%)
Query: 1004 PQQQPFPKQPGTSGAYPLTSPPTSYHS---------TVNQSPSMMHTQSPGN-------- 1046
P P P Q YP PT S TV SP+ T SP
Sbjct: 584 PCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRA 643
Query: 1047 ----LHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSP 1102
+ ++P G + SP SF PP G S G GT P SP
Sbjct: 644 PSPGAYKTATPPG-YKPGSPPSFRTGTPPGYRGTSPPAGP------GTFKPGSPTV---- 692
Query: 1103 SGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPR 1162
PG +GPS +P PA P+ P+ +T + +PP R
Sbjct: 693 ------GPGPLPPAGPSGLPSLP-PPPAAPASGPPLSATQIKQEPAEEYETPESPVPPAR 745
Query: 1163 KLPQRSWAASIPTILTHSA 1181
+P+ + SA
Sbjct: 746 SPSPPPKVVDVPSHASQSA 764
Score = 38.1 bits (87), Expect = 0.062
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 32/146 (21%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP 1062
PP P+ K+ + GAY +PP SP T +P S P+G P
Sbjct: 633 PPGPPPYGKRAPSPGAYKTATPP----GYKPGSPPSFRTGTPPGYRGTSPPAG------P 682
Query: 1063 ASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAA 1122
+F P P ++GP G L P+ P + S P + SGP +A
Sbjct: 683 GTFKPGSP------TVGP--------GPLPPAGPSGLPSLPP-----PPAAPASGPPLSA 723
Query: 1123 RMPGMSPAN--PSLHSPVPDA-SHSP 1145
PA + SPVP A S SP
Sbjct: 724 TQIKQEPAEEYETPESPVPPARSPSP 749
Score = 37.0 bits (84), Expect = 0.14
Identities = 48/186 (25%), Positives = 69/186 (37%), Gaps = 18/186 (9%)
Query: 1001 QPPPQQQPFPKQPGTSGAYPLTSPP-TSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRA 1059
Q PP P+ + S A+P PP T ST + S H +
Sbjct: 440 QGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQ 499
Query: 1060 PSPASFVPTPPPSSHGISIGPGASFASP--HGTLDPSSPYTMVSPSGRAGNWPGSPQVSG 1117
PPP PGA F P G+ + PY M G +P P
Sbjct: 500 QQQHHGNSGPPP--------PGA-FPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGP-AHL 549
Query: 1118 PSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRS--WAASIPT 1175
P P +++ S A P + P +S + + TS + P + P P + PQ + +PT
Sbjct: 550 PPPHSQV-SYSQAGP--NGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPT 606
Query: 1176 ILTHSA 1181
+ T SA
Sbjct: 607 VTTSSA 612
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 51.6 bits (122), Expect = 5e-06
Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 26/184 (14%)
Query: 1002 PPPQQQPFPKQPGTSGAYPLTS-------PPTSYHSTVNQSPSMMHTQSPGNLHAASSPS 1054
PPP P P+ P ++ P S PT YH+ + S M PG A P
Sbjct: 161 PPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPG----APPPH 216
Query: 1055 GALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYT--MVSPSGRAGNWPGS 1112
L + PP G G +S P+G P T VS SG +G P
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKG--GGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTK 274
Query: 1113 P--------QVSGPSPAARMPGMSP--ANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPR 1162
P + P A P ++P P P+ +AS SP G +Q +P ++P P
Sbjct: 275 PPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP-PGLGAQPLPGHLPSPH 333
Query: 1163 KLPQ 1166
+ Q
Sbjct: 334 AMGQ 337
Score = 41.2 bits (95), Expect = 0.007
Identities = 56/209 (26%), Positives = 76/209 (36%), Gaps = 31/209 (14%)
Query: 984 PPSPIGGDMMDSLIS----QLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMM 1039
P P GG S+ + PPP G SGA P T PPT+
Sbjct: 232 PMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPP-TKPPTT------------ 278
Query: 1040 HTQSPGNLHAASSPSGALRAPSPASFVPTPP---PSSHGISIGPGASFASPHGTLDPSSP 1096
GNL +A P+ P +P PP P ++ + PG G L SP
Sbjct: 279 -PVGGGNLPSAPPPA---NFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHL--PSP 332
Query: 1097 YTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPA-NPSLHSPVPDASHSPRAGTSSQTMP 1155
+ M G P PSP + P S A P + P +S S A +SS +
Sbjct: 333 HAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSS 392
Query: 1156 TN----MPPPRKLPQRSWAASIPTILTHS 1180
++ P + LP + PT L+ S
Sbjct: 393 SSSASPFPASQALPSYPHSFPPPTSLSVS 421
Score = 38.1 bits (87), Expect = 0.062
Identities = 49/199 (24%), Positives = 64/199 (32%), Gaps = 39/199 (19%)
Query: 1004 PQQQPFPKQPGTSGAYPLTSPPTSYHS---------TVNQSPSMMHTQSPGN-------- 1046
P P P Q YP PT S TV SP+ T SP
Sbjct: 584 PCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRA 643
Query: 1047 ----LHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSP 1102
+ ++P G + SP SF PP G S G GT P SP
Sbjct: 644 PSPGAYKTATPPG-YKPGSPPSFRTGTPPGYRGTSPPAGP------GTFKPGSPTV---- 692
Query: 1103 SGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPR 1162
PG +GPS +P PA P+ P+ +T + +PP R
Sbjct: 693 ------GPGPLPPAGPSGLPSLP-PPPAAPASGPPLSATQIKQEPAEEYETPESPVPPAR 745
Query: 1163 KLPQRSWAASIPTILTHSA 1181
+P+ + SA
Sbjct: 746 SPSPPPKVVDVPSHASQSA 764
Score = 38.1 bits (87), Expect = 0.062
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 32/146 (21%)
Query: 1003 PPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP 1062
PP P+ K+ + GAY +PP SP T +P S P+G P
Sbjct: 633 PPGPPPYGKRAPSPGAYKTATPP----GYKPGSPPSFRTGTPPGYRGTSPPAG------P 682
Query: 1063 ASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAA 1122
+F P P ++GP G L P+ P + S P + SGP +A
Sbjct: 683 GTFKPGSP------TVGP--------GPLPPAGPSGLPSLPP-----PPAAPASGPPLSA 723
Query: 1123 RMPGMSPAN--PSLHSPVPDA-SHSP 1145
PA + SPVP A S SP
Sbjct: 724 TQIKQEPAEEYETPESPVPPARSPSP 749
Score = 37.0 bits (84), Expect = 0.14
Identities = 48/186 (25%), Positives = 69/186 (37%), Gaps = 18/186 (9%)
Query: 1001 QPPPQQQPFPKQPGTSGAYPLTSPP-TSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRA 1059
Q PP P+ + S A+P PP T ST + S H +
Sbjct: 440 QGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQ 499
Query: 1060 PSPASFVPTPPPSSHGISIGPGASFASP--HGTLDPSSPYTMVSPSGRAGNWPGSPQVSG 1117
PPP PGA F P G+ + PY M G +P P
Sbjct: 500 QQQHHGNSGPPP--------PGA-FPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGP-AHL 549
Query: 1118 PSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRS--WAASIPT 1175
P P +++ S A P + P +S + + TS + P + P P + PQ + +PT
Sbjct: 550 PPPHSQV-SYSQAGP--NGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPT 606
Query: 1176 ILTHSA 1181
+ T SA
Sbjct: 607 VTTSSA 612
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 50.8 bits (120), Expect = 9e-06
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 19/192 (9%)
Query: 1023 SPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSP-ASFVPTPPPSSHGISIGPG 1081
+P + +T P+ + + AAS P A + AS T P SS S P
Sbjct: 305 APVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSPADSPRPQ 364
Query: 1082 ASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDA 1141
AS SP + + S A + S + P+P R+ + PS++ PVP +
Sbjct: 365 ASSYSP----------AVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPAS 414
Query: 1142 SHSPRAGTS-SQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAG 1200
++SP G + S T T P P P + A + + T++ PSP P P A
Sbjct: 415 TYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYT-------PSPAPAYTPSPAP 467
Query: 1201 SYLCSPLERFLG 1212
+Y +P + G
Sbjct: 468 NYNPAPSVAYSG 479
Score = 33.5 bits (75), Expect = 1.5
Identities = 53/238 (22%), Positives = 79/238 (33%), Gaps = 50/238 (21%)
Query: 991 DMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPG----N 1046
D SL++ P P+ + P PGT P SP S S + S+ PG +
Sbjct: 112 DTNGSLVAP-SPSPEARASPGTPGTPELRPTFSPAFSRPSAFS---SLAEASDPGPPRAS 167
Query: 1047 LHAASSPSGALRAPSPASFVPTPPPSSHGISIG--------------------------- 1079
L A +SP GA P + + P + IG
Sbjct: 168 LRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGL 227
Query: 1080 PGASFASPHGTLDPSSP-YTMV-----SPSGRAGNW---PGSPQVSGPSPAARMPG---- 1126
PG S +D +SP Y V P A W + Q A+M G
Sbjct: 228 PGGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFM 287
Query: 1127 MSPANPSLHSPVPDASHSPRAGTSSQT--MPTNMPPPRKLPQRSWAASIPTILTHSAL 1182
P +L H+P + + T +P + PP + + + T H+A+
Sbjct: 288 QDPDEEALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAI 345
Score = 33.1 bits (74), Expect = 2.0
Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 20/184 (10%)
Query: 955 PAPGLKTFLNMFVDSNQDARRRSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQPFPKQPG 1014
P P ++ S+ A S +E P+P + + I +P QP
Sbjct: 361 PRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASI---------RPSVYQPV 411
Query: 1015 TSGAYPLTSPPTSYHST-VNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSS 1073
+ Y SP +Y T SP+ +T SP + S +P+PA + P+P P
Sbjct: 412 PASTYS-PSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPA-YTPSPAP-- 467
Query: 1074 HGISIGPGASFASPHGTLDPSSPYTMVSPSGRAGNW-PG--SPQVSGPSPAARMPGMSPA 1130
+ P S A G +P+S V+ + + PG + +S + P +PA
Sbjct: 468 ---NYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPA 524
Query: 1131 NPSL 1134
P +
Sbjct: 525 GPQV 528
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase 4
[Homo sapiens]
Length = 1039
Score = 50.8 bits (120), Expect = 9e-06
Identities = 59/202 (29%), Positives = 75/202 (37%), Gaps = 32/202 (15%)
Query: 968 DSNQDARRRS---VNEDDNPPSPIGGDMMDSLISQLQPPPQ---QQPFPKQPGTSGAYPL 1021
D + +RR+ +N DD G+++DSL PP+ Q P P P GA
Sbjct: 416 DEEDEVQRRAFLFLNPDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGA--T 473
Query: 1022 TSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPG 1081
+PPT +P S A P RAP P V PPP + + PG
Sbjct: 474 LAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPG 533
Query: 1082 ASFASPHGTLDPSSPYTMVSPSGRAGNWPGSPQV-SGPSPAARMPGMSPANPSLHSPVPD 1140
ASP +P+ RA WP P V P P R+ +P P P
Sbjct: 534 QR-ASPR------------APAPRA-PWPPFPGVFLHPRPLPRVQLRAP-------PRPP 572
Query: 1141 ASHSPRAGTSSQTMPTNMPPPR 1162
H R G T P PP R
Sbjct: 573 RPHGRRTGGPQATQP--RPPAR 592
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapiens]
Length = 490
Score = 50.4 bits (119), Expect = 1e-05
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 18/211 (8%)
Query: 992 MMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAAS 1051
++ L+S + PP P S ++SPP+ S ++ PS++ +
Sbjct: 106 LVSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLL----------SG 155
Query: 1052 SPSGALRAPSPASFVPTPPPSSHGISIG---PGASFASPHGTLDPSSPYTMVSPSGRAGN 1108
PS PSP S VP+PP + G P + SP + PS P + S
Sbjct: 156 VPSPPSDVPSPPSDVPSPPSDVPSLLSGVPSPPSDVPSPPSDV-PSPPSDVPLLSDVPSP 214
Query: 1109 WPGSPQVSG-PSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQR 1167
P +S PSP + +P + PSL S P + + P+++ PP +P
Sbjct: 215 PSDVPLLSDVPSPPSDVPSLPSDVPSLSGVPSPPSDVPSLLSGVPSPPSDISPPSDVP-- 272
Query: 1168 SWAASIPTILTHSALNILLLPSPTPGLVPGL 1198
S + +P++ + + +PSP P VP L
Sbjct: 273 SLLSDVPSLPSDVPSLLSGVPSP-PSDVPSL 302
Score = 43.1 bits (100), Expect = 0.002
Identities = 49/189 (25%), Positives = 74/189 (39%), Gaps = 34/189 (17%)
Query: 983 NPPSPIGGDMMDSLISQLQPPPQQQPFPKQ--PGTSGAYPLTSPPTSYHSTVNQSPSMMH 1040
+PPS + SL+S + PP P P P SG + SPP+ S + PS
Sbjct: 294 SPPSDV-----PSLLSDVPSPPSDVPSPPSDIPLLSG---VPSPPSDVPSPPSDVPS--- 342
Query: 1041 TQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPHGTLDPSSPYTMV 1100
P ++ S L S VP+PP + + SPH L S Y++V
Sbjct: 343 --PPSDVPLLSGVPSPLSDVPLLSGVPSPPSDVPSLLM-------SPHRLL--MSHYSLV 391
Query: 1101 SPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPP 1160
SP ++ PS + +P + PS S VP + ++P+ +P
Sbjct: 392 SPH----------RLDVPSLLSDVPSLLSGVPSSPSGVPSLPSGVPILSGVPSLPSGVPS 441
Query: 1161 PRKLPQRSW 1169
P +P W
Sbjct: 442 PSGVPITLW 450
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,028,603
Number of Sequences: 37866
Number of extensions: 3421292
Number of successful extensions: 35631
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 1262
Number of HSP's that attempted gapping in prelim test: 24687
Number of HSP's gapped (non-prelim): 11345
length of query: 1454
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1339
effective length of database: 13,892,928
effective search space: 18602630592
effective search space used: 18602630592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.