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Search of human proteins with 28316810
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28316810 coiled-coil domain containing 107 [Homo sapiens]
(283 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28316810 coiled-coil domain containing 107 [Homo sapiens] 570 e-163
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 37 0.026
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 37 0.026
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom... 37 0.026
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 37 0.026
gi|221139761 zinc finger protein 853 [Homo sapiens] 35 0.057
gi|21735548 centrosomal protein 2 [Homo sapiens] 35 0.097
gi|205360981 resistance to inhibitors of cholinesterase 3 homolo... 35 0.097
gi|157042792 coiled-coil domain containing 64B [Homo sapiens] 34 0.13
gi|28274705 family with sequence similarity 9, member A [Homo sa... 33 0.37
gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 32 0.48
gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 32 0.48
gi|195972866 keratin 10 [Homo sapiens] 32 0.48
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 32 0.48
gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens] 32 0.82
gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens] 32 0.82
gi|4507379 TATA box binding protein [Homo sapiens] 31 1.1
gi|4503489 ephrin-B3 precursor [Homo sapiens] 31 1.1
gi|229577185 epidermal growth factor receptor pathway substrate ... 31 1.4
gi|4503593 epidermal growth factor receptor pathway substrate 15... 31 1.4
gi|47578099 selenoprotein N, 1 isoform 1 precursor [Homo sapiens] 31 1.4
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 31 1.4
gi|219689123 pleckstrin homology domain containing, family A mem... 31 1.4
gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo s... 30 1.8
gi|55741655 anoctamin 8 [Homo sapiens] 30 1.8
gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens] 30 1.8
gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo s... 30 1.8
gi|47578101 selenoprotein N, 1 isoform 2 precursor [Homo sapiens] 30 1.8
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 30 1.8
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom... 30 1.8
>gi|28316810 coiled-coil domain containing 107 [Homo sapiens]
Length = 283
Score = 570 bits (1469), Expect = e-163
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MAGAVSLLGVVGLLLVSALSGVLGDRANPDLRAHPGNAAHPGSGATEPRRRPPLKDQRER 60
MAGAVSLLGVVGLLLVSALSGVLGDRANPDLRAHPGNAAHPGSGATEPRRRPPLKDQRER
Sbjct: 1 MAGAVSLLGVVGLLLVSALSGVLGDRANPDLRAHPGNAAHPGSGATEPRRRPPLKDQRER 60
Query: 61 TRAGSLPLGALYTAAVAAFVLYKCLQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQT 120
TRAGSLPLGALYTAAVAAFVLYKCLQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQT
Sbjct: 61 TRAGSLPLGALYTAAVAAFVLYKCLQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQT 120
Query: 121 EQHLNNLMAQLDPLFERVTTLAGAQQELLNMKLWTIHELLQDSKPDKDMEASEPGEGSGG 180
EQHLNNLMAQLDPLFERVTTLAGAQQELLNMKLWTIHELLQDSKPDKDMEASEPGEGSGG
Sbjct: 121 EQHLNNLMAQLDPLFERVTTLAGAQQELLNMKLWTIHELLQDSKPDKDMEASEPGEGSGG 180
Query: 181 ESAGGGDKVSETGTFLISPHTEASRPLPEDFCLKEDEEEVGDSQAWEEPTNWSTETWNLA 240
ESAGGGDKVSETGTFLISPHTEASRPLPEDFCLKEDEEEVGDSQAWEEPTNWSTETWNLA
Sbjct: 181 ESAGGGDKVSETGTFLISPHTEASRPLPEDFCLKEDEEEVGDSQAWEEPTNWSTETWNLA 240
Query: 241 TSWEVGRGLRRRCSQAVAKGPSHSLGWEGGTTAEGRLKQSLFS 283
TSWEVGRGLRRRCSQAVAKGPSHSLGWEGGTTAEGRLKQSLFS
Sbjct: 241 TSWEVGRGLRRRCSQAVAKGPSHSLGWEGGTTAEGRLKQSLFS 283
>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
sapiens]
Length = 603
Score = 36.6 bits (83), Expect = 0.026
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 94 LHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNL---MAQLDPLFERVTTLAGAQQEL-- 148
L K++ + E++L + ++L + E+ L L + L+ L + +Q++
Sbjct: 326 LLNRGQKERLREQEERLQEQQERLREREKRLQQLAEPQSDLEELKHENKSALQLEQQVKE 385
Query: 149 LNMKLWTIHELLQDSKPDKDMEASEPGEGSGGESAGGGDKVSE 191
L KL + E L + +K+ EA+ P G+GGES+G D + E
Sbjct: 386 LQEKLGQVMETLTSA--EKEPEAAVPASGTGGESSGLMDLLEE 426
>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
sapiens]
Length = 603
Score = 36.6 bits (83), Expect = 0.026
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 94 LHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNL---MAQLDPLFERVTTLAGAQQEL-- 148
L K++ + E++L + ++L + E+ L L + L+ L + +Q++
Sbjct: 326 LLNRGQKERLREQEERLQEQQERLREREKRLQQLAEPQSDLEELKHENKSALQLEQQVKE 385
Query: 149 LNMKLWTIHELLQDSKPDKDMEASEPGEGSGGESAGGGDKVSE 191
L KL + E L + +K+ EA+ P G+GGES+G D + E
Sbjct: 386 LQEKLGQVMETLTSA--EKEPEAAVPASGTGGESSGLMDLLEE 426
>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
sapiens]
Length = 314
Score = 36.6 bits (83), Expect = 0.026
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 94 LHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNL---MAQLDPLFERVTTLAGAQQEL-- 148
L K++ + E++L + ++L + E+ L L + L+ L + +Q++
Sbjct: 38 LLNRGQKERLREQEERLQEQQERLREQEKRLQQLAEPQSDLEELKHENKSALQLEQQVKE 97
Query: 149 LNMKLWTIHELLQDSKPDKDMEASEPGEGSGGESAGGGDKVSE 191
L KL + E L + +K+ EA+ P G+GGES+G D + E
Sbjct: 98 LQEKLGQVTETLTSA--EKEPEAAVPASGTGGESSGLMDLLEE 138
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 36.6 bits (83), Expect = 0.026
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 85 LQGKDETAVLHEEASKQQPLQ--SEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLA 142
L ++ A+L E A + S L +L QQL ++ L +L +QL+ + +V + +
Sbjct: 2776 LLNRERDALLSETAFSMNSTEENSLSHLEKLNQQLLSKDEQLLHLSSQLEDSYNQVQSFS 2835
Query: 143 GAQQELLNMK--LWTIHELLQDSKPDKDMEASEP 174
A L N + LW E + S+ K A++P
Sbjct: 2836 KAMASLQNERDHLWNELEKFRKSEEGKQRSAAQP 2869
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 35.4 bits (80), Expect = 0.057
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 96 EEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMKLWT 155
++ +Q L+ +++L QL QQL Q +Q L QL E GAQQ+ + ++L
Sbjct: 351 QQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQEVQL----ELTPVELGAQQQEVQLELTP 406
Query: 156 IHELLQDSKPDKDMEASEPGEGSGGESAGG 185
+ +P+ +E P G GG + G
Sbjct: 407 V-------QPELQLEL-VPAAGGGGAAVPG 428
Score = 29.3 bits (64), Expect = 4.1
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 88 KDETAVLHEEASKQQPLQSEQQLAQLTQQLAQT----EQHLNNLMAQLDPLFERVTTLAG 143
K E ++H++ Q EQQ Q Q+ QT EQ + QL + L
Sbjct: 147 KPELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQ 206
Query: 144 AQQELLNMKLWTIHELLQDSKPDKDME 170
Q++L +L E LQ + + E
Sbjct: 207 QQEQLQQQQLLQQQEQLQQQQFQQQQE 233
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 34.7 bits (78), Expect = 0.097
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 80 VLYKCLQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVT 139
VL + LQ E L E++ + Q ++++ LAQ Q+L +Q Q + + E+
Sbjct: 1782 VLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKAD 1841
Query: 140 TLAGAQQELLNMKLWTIHELLQDSK 164
L GA ++ +M L H LQD K
Sbjct: 1842 ALQGALEQ-AHMTLKERHGELQDHK 1865
>gi|205360981 resistance to inhibitors of cholinesterase 3 homolog
isoform a [Homo sapiens]
Length = 368
Score = 34.7 bits (78), Expect = 0.097
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 109 QLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMKLWTIHELLQDSK---- 164
+LAQL ++L +TE + L+ ++ P ER T+ Q++ L +L I ++++ K
Sbjct: 146 ELAQLQEKLKETEAAMEKLINRVGPNGERAQTVTSDQEKRLLHQLREITRVMKEGKFIDR 205
Query: 165 --PDKDMEAS---EPGEGSGGES---AGGGDKVSETGTFLISPHTEASRPLPEDFCLKED 216
P+K+ E + E EG E+ D + ++ + + E+ +
Sbjct: 206 FSPEKEAEEAPYMEDWEGYPEETYPIYDLSDCIKRRQETILVDYPDPKELSAEEIAERMG 265
Query: 217 --EEEVGDSQAWEE-PTNWSTETWNLATS 242
EEE D WE PT+ + N TS
Sbjct: 266 MIEEEESDHLGWESLPTDPRAQEDNSVTS 294
>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
Length = 508
Score = 34.3 bits (77), Expect = 0.13
Identities = 52/184 (28%), Positives = 74/184 (40%), Gaps = 31/184 (16%)
Query: 13 LLLVSALSGVLGDRANPDLRAHPGNAAHPGSGATEPRRRPPLKDQRERTRAGSLPLGALY 72
LLL + L +L +R N +LR + A R L+ + R G GA +
Sbjct: 61 LLLAAELGKMLLER-NEELRRQLETLS-----AQHLEREERLQQENHELRRGLAARGAEW 114
Query: 73 TAAVAAFVLYKCLQGKDET--AVLHEEASKQQPLQSE---------QQLAQLTQQLAQTE 121
A L+G E A L E+ S+QQ E +Q +L+QQLAQ
Sbjct: 115 EARAVE------LEGDVEALRAQLGEQRSEQQDSGRERARALSELSEQNLRLSQQLAQAS 168
Query: 122 QHLNNLMAQLDPLFE--RVTTLAGAQQELLNMKLWTIHELLQDSKPDKD------MEASE 173
Q L +LD L + LAGA+ L +++LQ + D + E E
Sbjct: 169 QTEQELQRELDALRGQCQAQALAGAELRTRLESLQGENQMLQSRRQDLEAQIRGLREEVE 228
Query: 174 PGEG 177
GEG
Sbjct: 229 KGEG 232
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 32.7 bits (73), Expect = 0.37
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 161 QDSKPDKDMEASEPGEGSGGESAGGGDKVSETGTFLISPHTEASRPLPEDFCLKEDEEEV 220
++ K +++ E E G G GE GGG + ET E E+ +K +E+
Sbjct: 230 EEEKEEEEEEGEEEGGGEEGEEGGGGGEGEET-----EEEEEEEEEEEEEEQIKAFQEK- 283
Query: 221 GDSQAWEEPTNWSTETWNL 239
+ W++PT +W L
Sbjct: 284 --QKRWQQPT--GVRSWRL 298
>gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo
sapiens]
Length = 258
Score = 32.3 bits (72), Expect = 0.48
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 29 PDLRAHPGNAAHPGSGATEPRRRPPLKDQRERTRAGS 65
P R PG AA PGS P PP DQ+ AGS
Sbjct: 97 PVARPEPGRAASPGSMVPGPPAPPPSGDQQPAPSAGS 133
>gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo
sapiens]
Length = 258
Score = 32.3 bits (72), Expect = 0.48
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 29 PDLRAHPGNAAHPGSGATEPRRRPPLKDQRERTRAGS 65
P R PG AA PGS P PP DQ+ AGS
Sbjct: 97 PVARPEPGRAASPGSMVPGPPAPPPSGDQQPAPSAGS 133
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 32.3 bits (72), Expect = 0.48
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 104 LQSEQQLAQ-LTQQLAQTEQH----LNNLMAQLDPLFERVTTLAGAQ-------QELLNM 151
LQS+ L Q L LA+TE L+ + AQ+ L E++ + Q+LL++
Sbjct: 379 LQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAETECQNTEYQQLLDI 438
Query: 152 KLWTIHELLQDSKPDKDMEASEPGEGSGGESAGGG 186
K+ +E+ Q + + E S G G GG S GGG
Sbjct: 439 KIRLENEI-QTYRSLLEGEGSSGGGGRGGGSFGGG 472
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 32.3 bits (72), Expect = 0.48
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 3 GAVSLLGVVGLLLVSALSGVLGDRANPDLRAHPGNAAHPGSGATEPRRRPPLKDQRERT 61
GAV G+ GL L+G+ GD+ P PG +P GAT P P +K +R T
Sbjct: 1057 GAVGSPGLPGLQGERGLTGLTGDKGEP---GPPGQPGYP--GATGPPGLPGIKGERGYT 1110
>gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 31.6 bits (70), Expect = 0.82
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 157 HELLQDSKPDKDMEASEPGEGSGGESAGGGDKVSETGTFLISPHTEASRPLPEDFCLKED 216
H+ L + D+ + S G E + SE G L + E + + +ED
Sbjct: 792 HKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDEVIDDQ---EED 848
Query: 217 EEEVGDSQAWEEP 229
EEE DS WE P
Sbjct: 849 EEETDDSDTWEPP 861
>gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 31.6 bits (70), Expect = 0.82
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 157 HELLQDSKPDKDMEASEPGEGSGGESAGGGDKVSETGTFLISPHTEASRPLPEDFCLKED 216
H+ L + D+ + S G E + SE G L + E + + +ED
Sbjct: 792 HKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDEVIDDQ---EED 848
Query: 217 EEEVGDSQAWEEP 229
EEE DS WE P
Sbjct: 849 EEETDDSDTWEPP 861
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 31.2 bits (69), Expect = 1.1
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 85 LQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGA 144
+Q + ++L E+ +QQ Q +QQ Q QQ Q +Q Q ++ A
Sbjct: 43 IQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAV 102
Query: 145 QQ 146
QQ
Sbjct: 103 QQ 104
>gi|4503489 ephrin-B3 precursor [Homo sapiens]
Length = 340
Score = 31.2 bits (69), Expect = 1.1
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 3 GAVSLLGVVGLLLVSALSGVLGDRANPDLRAHPGNAAHPGSG----ATEPRRRPP 53
GA+ LLGV+GL+ +L V + AN +A G +P G PR RPP
Sbjct: 14 GALLLLGVLGLVSGLSLEPVYWNSANKRFQAEGGYVLYPQIGDRLDLLCPRARPP 68
>gi|229577185 epidermal growth factor receptor pathway substrate 15
isoform B [Homo sapiens]
Length = 582
Score = 30.8 bits (68), Expect = 1.4
Identities = 15/54 (27%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 100 KQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMKL 153
+++ ++ ++L++L Q+ A+ E+ + + AQL+PL + L +QQE+ +M++
Sbjct: 130 EEELAKAREELSRLQQETAELEESVESGKAQLEPLQQH---LQDSQQEISSMQM 180
>gi|4503593 epidermal growth factor receptor pathway substrate 15
isoform A [Homo sapiens]
Length = 896
Score = 30.8 bits (68), Expect = 1.4
Identities = 15/54 (27%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 100 KQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMKL 153
+++ ++ ++L++L Q+ A+ E+ + + AQL+PL + L +QQE+ +M++
Sbjct: 444 EEELAKAREELSRLQQETAELEESVESGKAQLEPLQQH---LQDSQQEISSMQM 494
>gi|47578099 selenoprotein N, 1 isoform 1 precursor [Homo sapiens]
Length = 590
Score = 30.8 bits (68), Expect = 1.4
Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 32 RAHPGNAAHPGSGATEPRRRPPLKDQRERTRAGSLPLGALYTAAVAAFVLYKCLQGKDET 91
RA PG P G P +PP +R R R+ +L LGAL AA AA V + +
Sbjct: 3 RARPGQRGPPSPG---PAAQPPAPPRR-RARSLAL-LGALLAAAAAAAVRVCARHAEAQA 57
Query: 92 AVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNM 151
A E A K + L T+ + + P+ E++T Q +
Sbjct: 58 AARQELALKTLGTDGLFLFSSL-----DTDGDMYISPEEFKPIAEKLTGSCSVTQTGVQ- 111
Query: 152 KLWTIHELLQDSKP 165
W H LQ P
Sbjct: 112 --WCSHSSLQPQLP 123
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 30.8 bits (68), Expect = 1.4
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 91 TAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQE 147
T + EEAS Q L +L+ L + LAQ + LN L+AQL+ E + L G Q++
Sbjct: 725 TKLRAEEASLQDSLS---KLSALNESLAQDKLDLNRLVAQLE---EEKSALQGRQRQ 775
>gi|219689123 pleckstrin homology domain containing, family A member
5 isoform 2 [Homo sapiens]
Length = 1105
Score = 30.8 bits (68), Expect = 1.4
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 90 ETAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHL-----------NNLMAQLDPLFERV 138
+T VL + + L + ++L++ T +L + + N + QLD L E
Sbjct: 619 QTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDHLGEVQ 678
Query: 139 TTLAGAQQELLNMKLWTIHEL---LQDSKPDKDMEASEP 174
T AG Q+ + +LW I ++ L K + M S+P
Sbjct: 679 TESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGMIGSKP 717
>gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo
sapiens]
Length = 754
Score = 30.4 bits (67), Expect = 1.8
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 11/134 (8%)
Query: 80 VLYKCLQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVT 139
+L + +Q +E A + + +Q + L QQL LN +AQL L + V
Sbjct: 618 ILSEKIQQLEEGAAISIVSGQQS--HTYDDLLHKNQQLTMQVACLNQELAQLKKLEKTVA 675
Query: 140 TLAGAQQELLNMKLWTIHELLQDSK--PDKDMEASEPGEGSGGESAGGGDKVS------- 190
L +Q+ L+ + + +L ++ K K + E G G S G +S
Sbjct: 676 ILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSSSPVAH 735
Query: 191 ETGTFLISPHTEAS 204
ETG +LI +A+
Sbjct: 736 ETGQYLIQSVLDAA 749
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 30.4 bits (67), Expect = 1.8
Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 30/150 (20%)
Query: 104 LQSEQQLAQLTQQLAQTEQHLNNLMAQLDP-LFERVTTLAGAQQELLNMKLWTIHE---- 158
L+ ++L ++ L T Q L N+ L P L+ R+ + EL +W +
Sbjct: 460 LKDMERLKEMLATLLITRQFLQNVREVLQPHLYRRL-----GRGELGLRAVWELARALLG 514
Query: 159 LLQDSKPDKDMEASEPGEGSGGESAGGGDKVSETGTFLISPHTEAS-------------- 204
LL +P + EG GG S GGG + G EA+
Sbjct: 515 LLSLRRPAPRRLEPQADEGGGGGSGGGGRRCLSGGCGAPEEEEEAALVERRRAGEGGEEG 574
Query: 205 ------RPLPEDFCLKEDEEEVGDSQAWEE 228
+ ED +EDEEE D + EE
Sbjct: 575 DGPPGGKEEDEDDEEEEDEEEEEDEEEGEE 604
>gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens]
Length = 376
Score = 30.4 bits (67), Expect = 1.8
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 6/160 (3%)
Query: 31 LRAHPGNAAHPGSGATEPRRRPPLKDQRERTRAGSLPLGALYTAAVAAFVLYKCLQGKDE 90
L P +AA +G P P + +G LP K L+ K +
Sbjct: 20 LSGQPASAAGAPAGQALPLMVPAQRGASPEAASGGLPQARKRQRLTHLSPEEKALRRKLK 79
Query: 91 TAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLN 150
V + A ++ + ++++L QQ+ E+ L+ + L E+ L QEL
Sbjct: 80 NRVAAQTARDRK----KARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQEL-- 133
Query: 151 MKLWTIHELLQDSKPDKDMEASEPGEGSGGESAGGGDKVS 190
+ + L+ + + + P GS +AG G V+
Sbjct: 134 RQRLGMDALVAEEEAEAKGNEVRPVAGSAESAAGAGPVVT 173
>gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo
sapiens]
Length = 633
Score = 30.4 bits (67), Expect = 1.8
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 11/134 (8%)
Query: 80 VLYKCLQGKDETAVLHEEASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVT 139
+L + +Q +E A + + +Q + L QQL LN +AQL L + V
Sbjct: 497 ILSEKIQQLEEGAAISIVSGQQS--HTYDDLLHKNQQLTMQVACLNQELAQLKKLEKTVA 554
Query: 140 TLAGAQQELLNMKLWTIHELLQDSK--PDKDMEASEPGEGSGGESAGGGDKVS------- 190
L +Q+ L+ + + +L ++ K K + E G G S G +S
Sbjct: 555 ILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSSSPVAH 614
Query: 191 ETGTFLISPHTEAS 204
ETG +LI +A+
Sbjct: 615 ETGQYLIQSVLDAA 628
>gi|47578101 selenoprotein N, 1 isoform 2 precursor [Homo sapiens]
Length = 556
Score = 30.4 bits (67), Expect = 1.8
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 32 RAHPGNAAHPGSGATEPRRRPPLKDQRERTRAGSLPLGALYTAAVAAFVLYKCLQGKDET 91
RA PG P G P +PP +R R R+ +L LGAL AA AA V + +
Sbjct: 3 RARPGQRGPPSPG---PAAQPPAPPRR-RARSLAL-LGALLAAAAAAAVRVCARHAEAQA 57
Query: 92 AVLHEEASK 100
A E A K
Sbjct: 58 AARQELALK 66
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 30.4 bits (67), Expect = 1.8
Identities = 13/56 (23%), Positives = 34/56 (60%)
Query: 97 EASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMK 152
E + + ++E++L + +++++ E +MA+++ L +RV + G +EL+ M+
Sbjct: 338 EETNRSLRKAEEELQDIKEKISKGEYGNAGIMAEVEELRKRVLDMEGKDEELIKME 393
>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
sapiens]
Length = 893
Score = 30.4 bits (67), Expect = 1.8
Identities = 13/56 (23%), Positives = 34/56 (60%)
Query: 97 EASKQQPLQSEQQLAQLTQQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMK 152
E + + ++E++L + +++++ E +MA+++ L +RV + G +EL+ M+
Sbjct: 98 EETNRSLRKAEEELQDIKEKISKGEYGNAGIMAEVEELRKRVLDMEGKDEELIKME 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,268,294
Number of Sequences: 37866
Number of extensions: 611715
Number of successful extensions: 3863
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 3627
Number of HSP's gapped (non-prelim): 269
length of query: 283
length of database: 18,247,518
effective HSP length: 101
effective length of query: 182
effective length of database: 14,423,052
effective search space: 2624995464
effective search space used: 2624995464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.