Search of human proteins with 27894287

Search of human proteins with 27894287

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27894287 PHD finger protein 7 isoform 2 [Homo sapiens]
         (342 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27894287 PHD finger protein 7 isoform 2 [Homo sapiens]             744   0.0  
gi|21361543 PHD finger protein 7 isoform 1 [Homo sapiens]             725   0.0  
gi|33620749 G2/M-phase specific E3 ubiquitin ligase [Homo sapiens]    207   1e-53
gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens]              65   1e-10
gi|28557677 PHD finger protein 6 isoform 1 [Homo sapiens]              64   2e-10
gi|62865858 PHD finger protein 6 isoform 1 [Homo sapiens]              64   2e-10
gi|94681069 PHD finger protein 11 isoform b [Homo sapiens]             58   1e-08
gi|94681065 PHD finger protein 11 isoform a [Homo sapiens]             58   1e-08
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    51   2e-06
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    50   2e-06
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    44   2e-04
gi|51173722 bromodomain and PHD finger-containing protein 1 isof...    43   5e-04
gi|51173720 bromodomain and PHD finger-containing protein 1 isof...    43   5e-04
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi...    42   6e-04
gi|11321642 bromodomain containing protein 1 [Homo sapiens]            42   8e-04
gi|40807477 retinoic acid induced 1 [Homo sapiens]                     41   0.001
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    41   0.002
gi|19923609 PHD finger protein 17 short isoform [Homo sapiens]         39   0.005
gi|40556393 PHD finger protein 17 long isoform [Homo sapiens]          39   0.005
gi|37622343 zinc finger protein 266 [Homo sapiens]                     39   0.007
gi|37622349 zinc finger protein 266 [Homo sapiens]                     39   0.007
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    38   0.015
gi|117190334 PHD finger protein 16 [Homo sapiens]                      37   0.026
gi|7662006 PHD finger protein 16 [Homo sapiens]                        37   0.026
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]           37   0.026
gi|89111947 zinc finger protein 80 [Homo sapiens]                      37   0.033
gi|41281612 zinc finger protein 828 [Homo sapiens]                     36   0.044
gi|154800445 zinc finger protein 62 homolog [Homo sapiens]             36   0.057
gi|13129116 zinc finger protein 426 [Homo sapiens]                     36   0.057
gi|195927047 zinc finger protein 286 [Homo sapiens]                    35   0.074

>gi|27894287 PHD finger protein 7 isoform 2 [Homo sapiens]
          Length = 342

 Score =  744 bits (1921), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60
           MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF
Sbjct: 1   MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60

Query: 61  CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120
           CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH
Sbjct: 61  CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120

Query: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180
           LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC
Sbjct: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180

Query: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRRWCLILCATCGSH 240
           SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRRWCLILCATCGSH
Sbjct: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRRWCLILCATCGSH 240

Query: 241 GTHRDCSSLRSNSKKWECEECSPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENP 300
           GTHRDCSSLRSNSKKWECEECSPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENP
Sbjct: 241 GTHRDCSSLRSNSKKWECEECSPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENP 300

Query: 301 GLSWTDWPEPSLLEKPESSRGRRSYSWRSKGVRITNSCKKSK 342
           GLSWTDWPEPSLLEKPESSRGRRSYSWRSKGVRITNSCKKSK
Sbjct: 301 GLSWTDWPEPSLLEKPESSRGRRSYSWRSKGVRITNSCKKSK 342


>gi|21361543 PHD finger protein 7 isoform 1 [Homo sapiens]
          Length = 381

 Score =  725 bits (1871), Expect = 0.0
 Identities = 342/381 (89%), Positives = 342/381 (89%), Gaps = 39/381 (10%)

Query: 1   MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60
           MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF
Sbjct: 1   MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60

Query: 61  CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120
           CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH
Sbjct: 61  CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120

Query: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180
           LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC
Sbjct: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180

Query: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDR------------- 227
           SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDR             
Sbjct: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRDAAWELEPGAFSD 240

Query: 228 --------------------------RWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 261
                                     RWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC
Sbjct: 241 LYQRYQHCDAPICLYEQGRDSFEDEGRWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 300

Query: 262 SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG 321
           SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG
Sbjct: 301 SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG 360

Query: 322 RRSYSWRSKGVRITNSCKKSK 342
           RRSYSWRSKGVRITNSCKKSK
Sbjct: 361 RRSYSWRSKGVRITNSCKKSK 381


>gi|33620749 G2/M-phase specific E3 ubiquitin ligase [Homo sapiens]
          Length = 706

 Score =  207 bits (527), Expect = 1e-53
 Identities = 114/285 (40%), Positives = 147/285 (51%), Gaps = 45/285 (15%)

Query: 22  VTQRKP--SSGPVCWLCLREPGDPEKLGEFLQKD--NISVHYFCLILSSKLPQRGQSNRG 77
           + + KP  S    C  C +    P K GE   K+  N++VHY+CL++SS + QRG+   G
Sbjct: 1   MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKEEEG 60

Query: 78  FHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEY 137
            +GFL EDI+KE  RAS+  C VCKK GA+I C   +C R++H PCG +R C+ QF G +
Sbjct: 61  VYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNF 120

Query: 138 KSFCDKHRPTQNIQHGHVGEE-SCILCCEDLSQQSVENI-QSPCCSQAIYHRKCIQKYAH 195
            SFC  HRP Q I   +  E   C +C E +      NI +SPCC  A +HR C+Q  A 
Sbjct: 121 ASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAI 180

Query: 196 TSAKHFFKCPQCNNRKEFPQEMLRMGIHI------------------------------- 224
            +   FF+C  CNN   F +EMLRMGIHI                               
Sbjct: 181 NAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRC 240

Query: 225 --------PDRRWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 261
                   PD +W +  C  CGS GTH  CSSLRS  + WEC EC
Sbjct: 241 KEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQNWECLEC 285


>gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens]
          Length = 312

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 12/146 (8%)

Query: 22  VTQRK-PSSGPVCWLCLREPGDPEKLGEFLQKDN--ISVHYFCLILSSKLPQRGQSNRGF 78
           V Q+K P+    C  C  +    ++ G+ L  +N  ++ H+ C++ SS L      N   
Sbjct: 5   VEQKKGPTRQRKCGFC--KSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESL 62

Query: 79  HGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC-----GQERGCLSQF 133
            GF  ED++KE  R ++ +C +C   GA I C    C R +H  C      Q R   SQ 
Sbjct: 63  GGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQ- 121

Query: 134 FGEYKSFCDKHRPTQNIQHGHVGEES 159
            G Y  +C KH+ T +       EES
Sbjct: 122 -GIYMVYCRKHKKTAHNSEAADLEES 146


>gi|28557677 PHD finger protein 6 isoform 1 [Homo sapiens]
          Length = 365

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 12/134 (8%)

Query: 22  VTQRK-PSSGPVCWLCLREPGDPEKLGEFLQKDN--ISVHYFCLILSSKLPQRGQSNRGF 78
           V Q+K P+    C  C  +    ++ G+ L  +N  ++ H+ C++ SS L      N   
Sbjct: 5   VEQKKGPTRQRKCGFC--KSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESL 62

Query: 79  HGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC-----GQERGCLSQF 133
            GF  ED++KE  R ++ +C +C   GA I C    C R +H  C      Q R   SQ 
Sbjct: 63  GGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQ- 121

Query: 134 FGEYKSFCDKHRPT 147
            G Y  +C KH+ T
Sbjct: 122 -GIYMVYCRKHKKT 134



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)

Query: 16  SAKTRRVTQRKPS-SGPVCWLCLREPGDPEKLGEF--LQKDNISVHYFCLILSSKLPQRG 72
           S + R   +  PS + P C  C     + E  G+         + HY C++ SS   Q  
Sbjct: 194 SYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLT 253

Query: 73  QSNRG-FHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCG---QERG 128
            ++R  F  F  + + +E  R  R  C +C + GA I C+   C++ +H  CG   + + 
Sbjct: 254 TTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKY 313

Query: 129 CLSQFFGEYKSFCDKH 144
             +   G YK +C  H
Sbjct: 314 IENMSRGIYKLYCKNH 329


>gi|62865858 PHD finger protein 6 isoform 1 [Homo sapiens]
          Length = 365

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 12/134 (8%)

Query: 22  VTQRK-PSSGPVCWLCLREPGDPEKLGEFLQKDN--ISVHYFCLILSSKLPQRGQSNRGF 78
           V Q+K P+    C  C  +    ++ G+ L  +N  ++ H+ C++ SS L      N   
Sbjct: 5   VEQKKGPTRQRKCGFC--KSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESL 62

Query: 79  HGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC-----GQERGCLSQF 133
            GF  ED++KE  R ++ +C +C   GA I C    C R +H  C      Q R   SQ 
Sbjct: 63  GGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQ- 121

Query: 134 FGEYKSFCDKHRPT 147
            G Y  +C KH+ T
Sbjct: 122 -GIYMVYCRKHKKT 134



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)

Query: 16  SAKTRRVTQRKPS-SGPVCWLCLREPGDPEKLGEF--LQKDNISVHYFCLILSSKLPQRG 72
           S + R   +  PS + P C  C     + E  G+         + HY C++ SS   Q  
Sbjct: 194 SYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLT 253

Query: 73  QSNRG-FHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCG---QERG 128
            ++R  F  F  + + +E  R  R  C +C + GA I C+   C++ +H  CG   + + 
Sbjct: 254 TTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKY 313

Query: 129 CLSQFFGEYKSFCDKH 144
             +   G YK +C  H
Sbjct: 314 IENMSRGIYKLYCKNH 329


>gi|94681069 PHD finger protein 11 isoform b [Homo sapiens]
          Length = 292

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 33  CWLCLREPGDPE-KLGEFLQKDNISVHYFCLILSSKLPQRGQSN--RGFHGFLPEDIKKE 89
           C LC   P D E  +  F Q +NI+ H  CL+ SS L +    +       F  E +KKE
Sbjct: 6   CALC---PKDVEYNVLYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKE 62

Query: 90  AARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQ---FFGEYKSFCDKH 144
             R  +  C  C K+GA + C    C +N+H  C ++   + Q     G YK  C +H
Sbjct: 63  IQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQH 120


>gi|94681065 PHD finger protein 11 isoform a [Homo sapiens]
          Length = 331

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 33  CWLCLREPGDPE-KLGEFLQKDNISVHYFCLILSSKLPQRGQSN--RGFHGFLPEDIKKE 89
           C LC   P D E  +  F Q +NI+ H  CL+ SS L +    +       F  E +KKE
Sbjct: 45  CALC---PKDVEYNVLYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKE 101

Query: 90  AARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQ---FFGEYKSFCDKH 144
             R  +  C  C K+GA + C    C +N+H  C ++   + Q     G YK  C +H
Sbjct: 102 IQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQH 159


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
           sapiens]
          Length = 4911

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 48/225 (21%), Positives = 82/225 (36%), Gaps = 41/225 (18%)

Query: 85  DIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKH 144
           ++ K     S + C  CK  GA I C +++C + +H PC    G   Q F      C +H
Sbjct: 272 NVDKAVVSGSTERCAFCKHLGATIKCCEEKCTQMYHYPCAAGAGTF-QDFSHIFLLCPEH 330

Query: 145 RPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTSAKHFFKC 204
                       + +C +C  D     ++      C Q  YH  C+        +  ++C
Sbjct: 331 --IDQAPERSKEDANCAVC--DSPGDLLDQFFCTTCGQH-YHGMCLDIAVTPLKRAGWQC 385

Query: 205 PQ---CNNRKEFPQEMLRMGIHIPDRRWCLILCATCGSHGTHRDC-----SSLRSNSKKW 256
           P+   C N K+  ++              +++C TC   G H  C      S+ +N  K 
Sbjct: 386 PECKVCQNCKQSGEDSK------------MLVCDTC-DKGYHTFCLQPVMKSVPTNGWKC 432

Query: 257 E----CEECSPAAATDY----------IPENSGDIPCCSSTFHPE 287
           +    C EC   +++ +            +     P C   +HPE
Sbjct: 433 KNCRICIECGTRSSSQWHHNCLICDNCYQQQDNLCPFCGKCYHPE 477



 Score = 37.4 bits (85), Expect = 0.020
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 98   CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRP 146
            C  C K GA   C + +C   +H  C  +  C+  FF +    C  H+P
Sbjct: 4462 CVFCHKTGATSGCHRFRCTNIYHFTCAIKAQCM--FFKDKTMLCPMHKP 4508


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
            sapiens]
          Length = 2715

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 11/114 (9%)

Query: 33   CWLCLRE-PGDPEKLGEFLQ-KDNISVHYFCLILSSKLPQRGQSNRGFHGFLPEDIKKEA 90
            C LCL+    D ++ G  L    N   H  C I S+++ +    +        +++    
Sbjct: 1581 CALCLKYGDADSKEAGRLLYIGQNEWTHVNCAIWSAEVFEENDGSL-------KNVHAAV 1633

Query: 91   ARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKH 144
            AR  +  C +C K GA + C    CL NFH  C +   C+  F  + K FC KH
Sbjct: 1634 ARGRQMRCELCLKPGATVGCCLSSCLSNFHFMCARASYCI--FQDDKKVFCQKH 1685


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
            sapiens]
          Length = 3969

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 84   EDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDK 143
            +++     R  +  C  C+K GA + C    C  N+H  C + + C+  F  + K +C +
Sbjct: 1919 KNVHMAVIRGKQLRCEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCV--FLDDKKVYCQR 1976

Query: 144  HR 145
            HR
Sbjct: 1977 HR 1978



 Score = 32.7 bits (73), Expect = 0.48
 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 20/104 (19%)

Query: 153  GHVGEESCILCCEDLSQQSVENIQSP--------CCSQAIYHRKCIQKYAHTSAKHFFKC 204
            GHV    C +CCE   +  +E  + P        CC +  +   C ++  H + K   +C
Sbjct: 1441 GHVEFVYCQVCCEPFHKFCLEENERPLEDQLENWCCRRCKFCHVCGRQ--HQATKQLLEC 1498

Query: 205  PQCNNRKEFPQEMLRMGIHIPDRR------WCLILCATCGSHGT 242
             +C N   +  E L  G + P +       W    C  C S G+
Sbjct: 1499 NKCRN--SYHPECL--GPNYPTKPTKKKKVWICTKCVRCKSCGS 1538


>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
           2 [Homo sapiens]
          Length = 1214

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 28/139 (20%)

Query: 25  RKPSSGPVCWLCLREPGDPEKLGEFLQKDNIS-VHYFCLILSSKLPQRGQSNRGFHGFLP 83
           + PS    C LC      P K G F Q D+    H  C +    +P+   +N  F    P
Sbjct: 322 QSPSRAVDCALC------PNKGGAFKQTDDGRWAHVVCALW---IPEVCFANTVF--LEP 370

Query: 84  EDIKKEAARASRKI-CFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCL---------- 130
            D  +    A  K+ C++CK++G  A I C K  C   FH+ C Q+ G            
Sbjct: 371 IDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETG 430

Query: 131 ---SQFFGEYKSFCDKHRP 146
              + F     ++CD H P
Sbjct: 431 ANGTSFSVRKTAYCDIHTP 449


>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform
           1 [Homo sapiens]
          Length = 1220

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 28/139 (20%)

Query: 25  RKPSSGPVCWLCLREPGDPEKLGEFLQKDNIS-VHYFCLILSSKLPQRGQSNRGFHGFLP 83
           + PS    C LC      P K G F Q D+    H  C +    +P+   +N  F    P
Sbjct: 322 QSPSRAVDCALC------PNKGGAFKQTDDGRWAHVVCALW---IPEVCFANTVF--LEP 370

Query: 84  EDIKKEAARASRKI-CFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCL---------- 130
            D  +    A  K+ C++CK++G  A I C K  C   FH+ C Q+ G            
Sbjct: 371 IDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETG 430

Query: 131 ---SQFFGEYKSFCDKHRP 146
              + F     ++CD H P
Sbjct: 431 ANGTSFSVRKTAYCDIHTP 449


>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
           sapiens]
          Length = 1205

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 27/143 (18%)

Query: 27  PSSGPVCWLCLREPGDP-------EKLGEFLQ-KDNISVHYFCLILSSKLPQRGQSNRGF 78
           P    +C  CL+ P  P        K G F Q  D    H  C I    +P+   +N  F
Sbjct: 250 PEGQWLCRCCLQSPSRPVDCILCPNKGGAFKQTSDGHWAHVVCAIW---IPEVCFANTVF 306

Query: 79  HGFLPEDIKKEAARASRKICFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCLSQ---- 132
              + E I        +  C++CK+KG  AAI C K  C   FH+ C Q  G   +    
Sbjct: 307 LEPI-EGIDNIPPARWKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPM 365

Query: 133 ---------FFGEYKSFCDKHRP 146
                    F     ++C+ H P
Sbjct: 366 RETSLNGTIFTVRKTAYCEAHSP 388


>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
          Length = 1058

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 32/140 (22%)

Query: 34  WLCLR------EPGD----PEKLGEFLQKDNISV-HYFCLILSSKLPQRGQSNRGFHGFL 82
           WLC         P D    P K G F + D+    H  C +    +P+ G +N  F    
Sbjct: 256 WLCRHCLQSRARPADCVLCPNKGGAFKKTDDDRWGHVVCALW---IPEVGFANTVF--IE 310

Query: 83  PEDIKKEAARASRKI-CFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCL--------- 130
           P D  +    A  K+ C++CK+KG  A I C K  C   FH+ C Q+ G           
Sbjct: 311 PIDGVRNIPPARWKLTCYLCKQKGVGACIQCHKANCYTAFHVTCAQKAGLYMKMEPVKEL 370

Query: 131 ----SQFFGEYKSFCDKHRP 146
               + F     ++CD H P
Sbjct: 371 TGGGTTFSVRKTAYCDVHTP 390


>gi|40807477 retinoic acid induced 1 [Homo sapiens]
          Length = 1906

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 97   ICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSF-CDKHR 145
            +C  C++ GA I C    CL  +H PC  + GC+  F  E  S  C KH+
Sbjct: 1856 MCSSCQEAGATIGCCHKGCLHTYHYPCASDAGCI--FIEENFSLKCPKHK 1903


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
           sapiens]
          Length = 5537

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 47/215 (21%), Positives = 71/215 (33%), Gaps = 35/215 (16%)

Query: 98  CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGE 157
           C  C + GA+I C+   C R +H PC    G         +  C +H         ++ E
Sbjct: 172 CSHCTRLGASIPCRSPGCPRLYHFPCATASGSFLS-MKTLQLLCPEHSEGA----AYLEE 226

Query: 158 ESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTSAKHFFKCPQC---------- 207
             C +C  +   +  +      C    YH  C+        +  ++CP+C          
Sbjct: 227 ARCAVC--EGPGELCDLFFCTSCGHH-YHGACLDTALTARKRAGWQCPECKVCQACRKPG 283

Query: 208 NNRKEFPQEMLRMGIH----------IPDRRWCLILCATCGSHGTHRDCSSLRSNSKKWE 257
           N+ K    E    G H          +P   W    C  C + G     + L  NS+ +E
Sbjct: 284 NDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCRACGA--GSAELNPNSEWFE 341

Query: 258 ----CEECSPAAATDYIPENSGD-IPCCSSTFHPE 287
               C  C  A     I   +    P CS    PE
Sbjct: 342 NYSLCHRCHKAQGGQTIRSVAEQHTPVCSRFSPPE 376



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 176 QSPCCSQAIYHRKCIQKYAHTSAKHFFK--CPQCNNRKEFPQEMLRMGIHIPDRRWCLIL 233
           +SP C + +YH  C        +    +  CP+ +    + +E        P     L  
Sbjct: 185 RSPGCPR-LYHFPCATASGSFLSMKTLQLLCPEHSEGAAYLEEARCAVCEGPGELCDLFF 243

Query: 234 CATCGSHGTHRDCSSLRSNSKK---WECEECSPAAATDYIPENSGDIPC--CSSTFHPEE 288
           C +CG H  H  C      ++K   W+C EC    A      +S  + C  C   +H   
Sbjct: 244 CTSCGHH-YHGACLDTALTARKRAGWQCPECKVCQACRKPGNDSKMLVCETCDKGYHT-- 300

Query: 289 HFCRDNTLEENPGLSW 304
            FC    +EE P  SW
Sbjct: 301 -FCLKPPMEELPAHSW 315



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 98   CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHR 145
            C +C++ GA  +C + +C   +H  C     C+  FF +    C  H+
Sbjct: 5092 CSLCQRTGATSSCNRMRCPNVYHFACAIRAKCM--FFKDKTMLCPMHK 5137


>gi|19923609 PHD finger protein 17 short isoform [Homo sapiens]
          Length = 509

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 11/78 (14%)

Query: 97  ICFVCKKK-GAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKH----R 145
           +C +C +K GA+I C    C   FH+ C  +RG  +     E     +KS+C KH    +
Sbjct: 314 VCSLCNEKFGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRK 373

Query: 146 PTQNIQHGHVGEESCILC 163
           P +++  G   E     C
Sbjct: 374 PEESLGKGAAQENGAPEC 391


>gi|40556393 PHD finger protein 17 long isoform [Homo sapiens]
          Length = 842

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 11/78 (14%)

Query: 97  ICFVCKKK-GAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKH----R 145
           +C +C +K GA+I C    C   FH+ C  +RG  +     E     +KS+C KH    +
Sbjct: 314 VCSLCNEKFGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRK 373

Query: 146 PTQNIQHGHVGEESCILC 163
           P +++  G   E     C
Sbjct: 374 PEESLGKGAAQENGAPEC 391


>gi|37622343 zinc finger protein 266 [Homo sapiens]
          Length = 549

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 180 CSQAIYHRKCIQKYAHT-SAKHFFKCPQCNNRKEFPQEM-LRMGIHIPDRRWCLILCATC 237
           C +A  H   +  +  T SAK  F C +C    +FP  + L M IH  ++ +    C  C
Sbjct: 441 CGKAFTHSSSLNNHMRTHSAKKPFTCMECGKAFKFPTCVNLHMRIHTGEKPY---KCKQC 497

Query: 238 GSHGTHRDCSSL----RSNSKKWECEECSPA 264
           G   ++ +   L     +  K +EC+EC  A
Sbjct: 498 GKSFSYSNSFQLHERTHTGEKPYECKECGKA 528


>gi|37622349 zinc finger protein 266 [Homo sapiens]
          Length = 549

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 180 CSQAIYHRKCIQKYAHT-SAKHFFKCPQCNNRKEFPQEM-LRMGIHIPDRRWCLILCATC 237
           C +A  H   +  +  T SAK  F C +C    +FP  + L M IH  ++ +    C  C
Sbjct: 441 CGKAFTHSSSLNNHMRTHSAKKPFTCMECGKAFKFPTCVNLHMRIHTGEKPY---KCKQC 497

Query: 238 GSHGTHRDCSSL----RSNSKKWECEECSPA 264
           G   ++ +   L     +  K +EC+EC  A
Sbjct: 498 GKSFSYSNSFQLHERTHTGEKPYECKECGKA 528


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
           [Homo sapiens]
          Length = 2073

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 25/105 (23%)

Query: 208 NNRKEFPQEMLRMGIHIPDRRWCLILCATCGSHGTH---RDCSSLRSNSK--KWECEECS 262
           +NR++ P+E+L               CA CGS G     + C  L +N K  +W+C EC 
Sbjct: 225 SNREKKPEELLS--------------CADCGSSGHPSCLKFCPELTTNVKALRWQCIECK 270

Query: 263 PAAATDYIPENSGDIPCCSST---FHPEEHFCRDNTLEENPGLSW 304
             +A      N+ ++  C S    FH E   C D  L   P   W
Sbjct: 271 TCSACRVQGRNADNMLFCDSCDRGFHME---CCDPPLSRMPKGMW 312


>gi|117190334 PHD finger protein 16 [Homo sapiens]
          Length = 823

 Score = 37.0 bits (84), Expect = 0.026
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 97  ICFVCK-KKGAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKHRPTQN 149
           +C +CK K GA I C    C+  FH+ C  E G  +     E     +KS+C KH  +QN
Sbjct: 311 VCNLCKLKTGACIQCSIKSCITAFHVTCAFEHGLEMKTILDEGDEVKFKSYCLKH--SQN 368

Query: 150 IQ 151
            Q
Sbjct: 369 RQ 370


>gi|7662006 PHD finger protein 16 [Homo sapiens]
          Length = 823

 Score = 37.0 bits (84), Expect = 0.026
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 97  ICFVCK-KKGAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKHRPTQN 149
           +C +CK K GA I C    C+  FH+ C  E G  +     E     +KS+C KH  +QN
Sbjct: 311 VCNLCKLKTGACIQCSIKSCITAFHVTCAFEHGLEMKTILDEGDEVKFKSYCLKH--SQN 368

Query: 150 IQ 151
            Q
Sbjct: 369 RQ 370


>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
          Length = 1960

 Score = 37.0 bits (84), Expect = 0.026
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 88   KEAARASRKI-CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRP 146
            +EA   +R++ C  C++ GA + C    C   +H PC  +  CL      +   C KH+P
Sbjct: 1876 QEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCAIDADCLLH-EENFSVRCPKHKP 1934


>gi|89111947 zinc finger protein 80 [Homo sapiens]
          Length = 273

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 145 RPTQNIQHGHV-GEESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTSAKHFFK 203
           +P + ++ G V    S +LC   +         S C     YH   IQ     + +  F 
Sbjct: 103 KPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFG 162

Query: 204 CPQCNNRKEFPQEMLR-MGIHIPDRRWCLILCATCGSHGTHRDC----SSLRSNSKKWEC 258
           C +C     +   + R M IH  ++      C+ CG   T+R      S   +  K +EC
Sbjct: 163 CKECGKTFYYNSSLTRHMKIHTGEKP---CKCSECGKTFTYRSVFFRHSMTHTAGKPYEC 219

Query: 259 EEC 261
           +EC
Sbjct: 220 KEC 222


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 14/115 (12%)

Query: 125 QERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESC-ILCCEDLSQQSV-------ENIQ 176
           Q R  L QF  E ++F  +    + ++ G  G+  C I CC  + + +V        N+ 
Sbjct: 678 QSRNVL-QFTEEKEAFISEEEIAKYMKRGK-GKYYCKICCCRAMKKGAVLHHLVNKHNVH 735

Query: 177 SP----CCSQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDR 227
           SP     C +A      ++ +     +   KCP+CN    FP+   +   H   R
Sbjct: 736 SPYKCTICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSR 790


>gi|154800445 zinc finger protein 62 homolog [Homo sapiens]
          Length = 840

 Score = 35.8 bits (81), Expect = 0.057
 Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 30/142 (21%)

Query: 143 KHRPTQNI---QHGHVGEESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTS-- 197
           K + T NI   Q G   E+S  L  + ++ Q++     P   +     K ++    TS  
Sbjct: 14  KAKSTANIKTEQEGEASEKSLHLSPQHITHQTM-----PIGQRGSEQGKRVENINGTSYP 68

Query: 198 --------AKHFFKCPQCNNRKEFPQEMLRMGI-HIPDRRWCLILCATCGSHGTHRDCSS 248
                    K   KC +C    ++   +++  I H  ++R+    C  CG  GT R  SS
Sbjct: 69  SLQQKTNAVKKLHKCDECGKSFKYNSRLVQHKIMHTGEKRY---ECDDCG--GTFRSSSS 123

Query: 249 LR------SNSKKWECEECSPA 264
           LR      +  K ++CEEC  A
Sbjct: 124 LRVHKRIHTGEKPYKCEECGKA 145


>gi|13129116 zinc finger protein 426 [Homo sapiens]
          Length = 554

 Score = 35.8 bits (81), Expect = 0.057
 Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 36/170 (21%)

Query: 138 KSFCDKHRPTQNIQHGHVGEES--CILCCEDLSQQS---------VENIQSPC--CSQAI 184
           KSF    R  Q+I+  H GE+   C+ C +  +  S          E     C  C +  
Sbjct: 371 KSFLTSSRLIQHIRT-HTGEKPFVCVECGKAFAVSSNLSGHLRTHTEEKACECKICGKVF 429

Query: 185 YHRKCIQKYAHT-SAKHFFKCPQCNNRKEFPQEM-LRMGIHIPDRRWCLILCATCGSHGT 242
            +  C+  +  T SA+  + C +C     +   + + M IH  ++ +    C  CG   +
Sbjct: 430 GYPSCLNNHMRTHSAQKPYTCKECGKAFNYSTHLKIHMRIHTGEKPY---ECKQCGKAFS 486

Query: 243 HRDCSSLRSNS----KKWECEECSPAAATDYIPENSGDIPCCSSTFHPEE 288
           H     +   +    K +EC+EC  A               CSS+F   E
Sbjct: 487 HSSSFQIHERTHTGEKPYECKECGKAFT-------------CSSSFRIHE 523


>gi|195927047 zinc finger protein 286 [Homo sapiens]
          Length = 521

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 180 CSQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQE---MLRMGIHIPDRRWCLILCAT 236
           C ++  HR  + K+  T  +  F+C +C  +K F +         IH+ +R +    C  
Sbjct: 276 CGKSFSHRANLTKHQRTHTRILFECSEC--KKTFTESSSLATHQRIHVGERPYECNECGK 333

Query: 237 CGSHGTHR-DCSSLRSNSKKWECEECSPA 264
             +  TH      + +  K +EC EC  A
Sbjct: 334 GFNRSTHLVQHQLIHTGVKPYECNECDKA 362


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,088,428
Number of Sequences: 37866
Number of extensions: 834152
Number of successful extensions: 3043
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 2635
Number of HSP's gapped (non-prelim): 660
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.