Search of human proteins with 27545315

Search of human proteins with 27545315

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27545315 translational activator of mitochondrially encoded
cytochrome c oxidase I [Homo sapiens]
         (297 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27545315 translational activator of mitochondrially encoded c...   597   e-171
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)...    34   0.14 
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]             34   0.14 
gi|19913396 smoothelin isoform b [Homo sapiens]                        34   0.14 
gi|19913394 smoothelin isoform c [Homo sapiens]                        34   0.14 
gi|58331144 proline rich region 18 [Homo sapiens]                      33   0.23 
gi|19913398 smoothelin isoform a [Homo sapiens]                        33   0.23 
gi|116235491 POU domain, class 5, transcription factor 1 isoform...    33   0.30 
gi|42560248 POU domain, class 5, transcription factor 1 isoform ...    33   0.30 
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ...    33   0.30 
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ...    33   0.30 
gi|24497589 aristaless related homeobox [Homo sapiens]                 32   0.67 
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa...    32   0.67 
gi|33286418 pyruvate kinase, muscle isoform M2 [Homo sapiens]          32   0.88 
gi|33286422 pyruvate kinase, muscle isoform M1 [Homo sapiens]          32   0.88 
gi|33286420 pyruvate kinase, muscle isoform M1 [Homo sapiens]          32   0.88 
gi|169218111 PREDICTED: similar to pyruvate kinase, muscle [Homo...    32   0.88 
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]          32   0.88 
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]          32   0.88 
gi|190194355 p90 autoantigen [Homo sapiens]                            31   1.1  
gi|87299628 biorientation of chromosomes in cell division 1-like...    31   1.1  
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    31   1.5  
gi|239757152 PREDICTED: hypothetical protein [Homo sapiens]            30   2.0  
gi|239754873 PREDICTED: similar to hCG2040393 [Homo sapiens]           30   2.0  
gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo ...    30   2.0  
gi|239749412 PREDICTED: hypothetical protein XP_002347031 [Homo ...    30   2.0  
gi|239743547 PREDICTED: hypothetical protein XP_002342883 [Homo ...    30   2.0  
gi|31982906 cingulin-like 1 [Homo sapiens]                             30   2.0  

>gi|27545315 translational activator of mitochondrially encoded
           cytochrome c oxidase I [Homo sapiens]
          Length = 297

 Score =  597 bits (1539), Expect = e-171
 Identities = 297/297 (100%), Positives = 297/297 (100%)

Query: 1   MSAWAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGH 60
           MSAWAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGH
Sbjct: 1   MSAWAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGH 60

Query: 61  NKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKS 120
           NKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKS
Sbjct: 61  NKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKS 120

Query: 121 TIETALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAVGAR 180
           TIETALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAVGAR
Sbjct: 121 TIETALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAVGAR 180

Query: 181 HSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLH 240
           HSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLH
Sbjct: 181 HSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLH 240

Query: 241 QVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNIE 297
           QVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNIE
Sbjct: 241 QVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNIE 297


>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
           [Homo sapiens]
          Length = 731

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 9/119 (7%)

Query: 117 MPKSTIETALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQA--DIRHILNK---N 171
           +P S++E   +  ++     + E  G G  S++ E    +SH C A  +++ IL +   N
Sbjct: 474 LPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSH-CDANTEMQQILTRVRQN 532

Query: 172 GGVMAVGARHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDE-EERNV 229
            G + V  + S D   ++ VEV D E++  +     E   E   +D +E+  E EE NV
Sbjct: 533 FGKINVVPQFSGD--DLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEESSSEPEEENV 589


>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 9/76 (11%)

Query: 9   LSRAAARCL--LARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLH--FTAAVPA---GHN 61
           LS+A  R L   AR  G+R   P  PRP  P P       G T     T+A P    G  
Sbjct: 127 LSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRG 186

Query: 62  KWSKVRHIKGPKDVER 77
              +  HI  PKD +R
Sbjct: 187 SAERTNHI--PKDKQR 200


>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 9/76 (11%)

Query: 9   LSRAAARCL--LARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLH--FTAAVPA---GHN 61
           LS+A  R L   AR  G+R   P  PRP  P P       G T     T+A P    G  
Sbjct: 127 LSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRG 186

Query: 62  KWSKVRHIKGPKDVER 77
              +  HI  PKD +R
Sbjct: 187 SAERTNHI--PKDKQR 200


>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 9/76 (11%)

Query: 9   LSRAAARCL--LARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLH--FTAAVPA---GHN 61
           LS+A  R L   AR  G+R   P  PRP  P P       G T     T+A P    G  
Sbjct: 127 LSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRG 186

Query: 62  KWSKVRHIKGPKDVER 77
              +  HI  PKD +R
Sbjct: 187 SAERTNHI--PKDKQR 200


>gi|19913396 smoothelin isoform b [Homo sapiens]
          Length = 915

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 9   LSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGHNKWSKVRH 68
           L  A A+CL A  PG    PP  P+ + PEP+     P         + +G  +    + 
Sbjct: 218 LEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQS 277

Query: 69  -IKGPKDVERSRI 80
             +GP D +R+ +
Sbjct: 278 PTRGPSDTKRADV 290


>gi|19913394 smoothelin isoform c [Homo sapiens]
          Length = 917

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 9   LSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGHNKWSKVRH 68
           L  A A+CL A  PG    PP  P+ + PEP+     P         + +G  +    + 
Sbjct: 218 LEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQS 277

Query: 69  -IKGPKDVERSRI 80
             +GP D +R+ +
Sbjct: 278 PTRGPSDTKRADV 290


>gi|58331144 proline rich region 18 [Homo sapiens]
          Length = 295

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 22/74 (29%)

Query: 2   SAWAAASLSRAAARCLLARGPGV-RAAPPRDPRPSH---------------PEPRGCGAA 45
           S+W +A+L R  AR    RGPG+ R  PP  P  S                P P G G +
Sbjct: 46  SSWPSATLKRPPAR----RGPGLDRTQPPAPPGVSPQALPSRARAPATCAPPRPAGSGHS 101

Query: 46  PGRTLHFTAAVPAG 59
           P RT +  AA  AG
Sbjct: 102 PARTTY--AATSAG 113


>gi|19913398 smoothelin isoform a [Homo sapiens]
          Length = 940

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 9   LSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGHNKWSKVRH 68
           L  A A+CL A  PG    PP  P+ + PEP+     P         + +G  +    + 
Sbjct: 218 LEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQS 277

Query: 69  -IKGPKDVERSRI 80
             +GP D +R+ +
Sbjct: 278 PHRGPSDTKRADV 290


>gi|116235491 POU domain, class 5, transcription factor 1 isoform 2
           [Homo sapiens]
          Length = 265

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 219 KETEDEEERNVFKFICDASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAH 278
           K  E+ +     + IC A +L Q RK+  +     V   LE   N  +Q  +P L+Q +H
Sbjct: 111 KWVEEADNNENLQEICKAETLVQARKRKRTSIENRVRGNLE---NLFLQCPKPTLQQISH 167

Query: 279 LIQALSNHEDVIHVY 293
           + Q L   +DV+ V+
Sbjct: 168 IAQQLGLEKDVVRVW 182


>gi|42560248 POU domain, class 5, transcription factor 1 isoform 1
           [Homo sapiens]
          Length = 360

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 219 KETEDEEERNVFKFICDASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAH 278
           K  E+ +     + IC A +L Q RK+  +     V   LE   N  +Q  +P L+Q +H
Sbjct: 206 KWVEEADNNENLQEICKAETLVQARKRKRTSIENRVRGNLE---NLFLQCPKPTLQQISH 262

Query: 279 LIQALSNHEDVIHVY 293
           + Q L   +DV+ V+
Sbjct: 263 IAQQLGLEKDVVRVW 277


>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
           sapiens]
          Length = 229

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 10/122 (8%)

Query: 2   SAWAAASLSRAAAR-CLLARG-PGVRAAPPRDPRPSHPE----PRGCGAAPGRTLHFTAA 55
           SA A  S +R+  R C   +G P   A+PP  PR S PE    PR    +  R    +A 
Sbjct: 21  SAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPR-SRPEGPGPPRPATPSARRPQGLSAG 79

Query: 56  VPAGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSK 115
           V AG  + S+   + GP+D   +R    L    R+     GP       L  +   C  +
Sbjct: 80  VSAGPAQRSRPLQLAGPRDRAPAR---ALHARTRMGRAARGPPAPSRGPLKRVTWTCAVR 136

Query: 116 HM 117
            +
Sbjct: 137 RL 138


>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
           sapiens]
          Length = 229

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 10/122 (8%)

Query: 2   SAWAAASLSRAAAR-CLLARG-PGVRAAPPRDPRPSHPE----PRGCGAAPGRTLHFTAA 55
           SA A  S +R+  R C   +G P   A+PP  PR S PE    PR    +  R    +A 
Sbjct: 21  SAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPR-SRPEGPGPPRPATPSARRPQGLSAG 79

Query: 56  VPAGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSK 115
           V AG  + S+   + GP+D   +R    L    R+     GP       L  +   C  +
Sbjct: 80  VSAGPAQRSRPLQLAGPRDRAPAR---ALHARTRMGRAARGPPAPSRGPLKRVTWTCAVR 136

Query: 116 HM 117
            +
Sbjct: 137 RL 138


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 11/83 (13%)

Query: 2   SAWAAASLSRAAARCLLARGPGVRAAPPRDP--RPSHPEPRGCGAAPGRTLHFTAAVPAG 59
           +A AAA+ + AAA      GP   A PP  P  RP    P G GAA        AA  A 
Sbjct: 101 AAAAAAAAAAAAAAATATAGPRGEAPPPPPPTARPGE-RPDGAGAA-------AAAAAAA 152

Query: 60  HNKWSKVRHIKGPK-DVERSRIF 81
              W  ++  + P+  + RS+ +
Sbjct: 153 AAAWDTLKISQAPQVSISRSKSY 175


>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
           sapiens]
          Length = 641

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 178 GARHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDAS 237
           G+     +K  I+  +E++  K     R LE  ++   +   E EDE+E+ + + +  + 
Sbjct: 405 GSEDGLKEKNEIIARLEEKTNKITAAMRQLEQRLQQAEKAQMEAEDEDEKYLQECLSKSD 464

Query: 238 SLH-QVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVI 290
           SL  Q+ +K   L        +E       Q  + DL++    +  L N    I
Sbjct: 465 SLQKQISQKEKQLVQLETDLKIE---KEWRQTLQEDLQKEKDALSHLRNETQQI 515


>gi|33286418 pyruvate kinase, muscle isoform M2 [Homo sapiens]
          Length = 531

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 20/126 (15%)

Query: 145 GSSLLIEALSNSSHKCQADIRHILNKN-GGVMAVGARHSFD---------KKGV--IVVE 192
           G++L I   +    KC  +I  +  KN   V+ VG++   D         +KG   +V E
Sbjct: 137 GATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTE 196

Query: 193 VEDR----EKKAVNLERA---LEMAIEAGAEDVKETEDEEERNVF-KFICDASSLHQVRK 244
           VE+      KK VNL  A   L    E   +D+K   +++   VF  FI  AS +H+VRK
Sbjct: 197 VENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRK 256

Query: 245 KLDSLG 250
            L   G
Sbjct: 257 VLGEKG 262


>gi|33286422 pyruvate kinase, muscle isoform M1 [Homo sapiens]
          Length = 531

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 20/126 (15%)

Query: 145 GSSLLIEALSNSSHKCQADIRHILNKN-GGVMAVGARHSFD---------KKGV--IVVE 192
           G++L I   +    KC  +I  +  KN   V+ VG++   D         +KG   +V E
Sbjct: 137 GATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTE 196

Query: 193 VEDR----EKKAVNLERA---LEMAIEAGAEDVKETEDEEERNVF-KFICDASSLHQVRK 244
           VE+      KK VNL  A   L    E   +D+K   +++   VF  FI  AS +H+VRK
Sbjct: 197 VENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRK 256

Query: 245 KLDSLG 250
            L   G
Sbjct: 257 VLGEKG 262


>gi|33286420 pyruvate kinase, muscle isoform M1 [Homo sapiens]
          Length = 531

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 20/126 (15%)

Query: 145 GSSLLIEALSNSSHKCQADIRHILNKN-GGVMAVGARHSFD---------KKGV--IVVE 192
           G++L I   +    KC  +I  +  KN   V+ VG++   D         +KG   +V E
Sbjct: 137 GATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTE 196

Query: 193 VEDR----EKKAVNLERA---LEMAIEAGAEDVKETEDEEERNVF-KFICDASSLHQVRK 244
           VE+      KK VNL  A   L    E   +D+K   +++   VF  FI  AS +H+VRK
Sbjct: 197 VENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRK 256

Query: 245 KLDSLG 250
            L   G
Sbjct: 257 VLGEKG 262


>gi|169218111 PREDICTED: similar to pyruvate kinase, muscle [Homo
           sapiens]
          Length = 364

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 20/126 (15%)

Query: 145 GSSLLIEALSNSSHKCQADIRHILNKN-GGVMAVGARHSFD---------KKGV--IVVE 192
           G++L I   +    KC  +I  +  KN   V+ VG++   D         +KG   +V E
Sbjct: 137 GATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTE 196

Query: 193 VEDR----EKKAVNLERA---LEMAIEAGAEDVKETEDEEERNVF-KFICDASSLHQVRK 244
           VE+      KK VNL  A   L    E   +D+K   +++   VF  FI  AS +H+VRK
Sbjct: 197 VENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRK 256

Query: 245 KLDSLG 250
            L   G
Sbjct: 257 VLGEKG 262


>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
          Length = 1044

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 20/223 (8%)

Query: 17  LLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGHNKWSKVRHIKGPKDVE 76
           L A GPG R  P  D  P   +P        RT    A   AG N    +  +   +   
Sbjct: 401 LPAAGPGDRCLPTSDSSPEPQQP-----PEDRTQDVLAQDAAGDN----LEMMAPSRGSA 451

Query: 77  RSR-IFSKLCLNIRLAVKEGG----PNPEHNSNLANILEVCRSKHMPKSTIETALKM--- 128
           +SR    +L   ++L  KE      P   H    A   E   +  +    +E   K+   
Sbjct: 452 KSRGPLEELLHTLQLLEKEPDVLPRPRTHHRGRYAWASEEDDASSLTADNLEKFGKLSAF 511

Query: 129 -EKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNG-GVMAVGARHSFDKK 186
            E  +D  LL E +     S L E   +   +  +     + + G G + +G+  S    
Sbjct: 512 PEPPEDGTLLSEAKLQSIMSFLDEMEKSGQDQLDSQQEGWVPEAGPGPLELGSEVSTSVM 571

Query: 187 GVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNV 229
             + +EVE++++  + L+RAL    +  A  VKETE    R +
Sbjct: 572 R-LKLEVEEKKQAMLLLQRALAQQRDLTARRVKETEKALSRQL 613


>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
          Length = 1080

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 20/223 (8%)

Query: 17  LLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGHNKWSKVRHIKGPKDVE 76
           L A GPG R  P  D  P   +P        RT    A   AG N    +  +   +   
Sbjct: 401 LPAAGPGDRCLPTSDSSPEPQQP-----PEDRTQDVLAQDAAGDN----LEMMAPSRGSA 451

Query: 77  RSR-IFSKLCLNIRLAVKEGG----PNPEHNSNLANILEVCRSKHMPKSTIETALKM--- 128
           +SR    +L   ++L  KE      P   H    A   E   +  +    +E   K+   
Sbjct: 452 KSRGPLEELLHTLQLLEKEPDVLPRPRTHHRGRYAWASEEDDASSLTADNLEKFGKLSAF 511

Query: 129 -EKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNG-GVMAVGARHSFDKK 186
            E  +D  LL E +     S L E   +   +  +     + + G G + +G+  S    
Sbjct: 512 PEPPEDGTLLSEAKLQSIMSFLDEMEKSGQDQLDSQQEGWVPEAGPGPLELGSEVSTSVM 571

Query: 187 GVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNV 229
             + +EVE++++  + L+RAL    +  A  VKETE    R +
Sbjct: 572 R-LKLEVEEKKQAMLLLQRALAQQRDLTARRVKETEKALSRQL 613


>gi|190194355 p90 autoantigen [Homo sapiens]
          Length = 905

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 147 SLLIEALSNSSHKCQADIRHILNKNGGVMAVGARHSFDKKGV--IVVEVEDREKKAVNLE 204
           S+L++A    S + Q+DI H+   N  + +V   H    K    ++   E  EKK  +L+
Sbjct: 690 SVLLKAQQVESERAQSDIEHLFQHNRKLESVAEEHEILTKSYMELLQRNESTEKKNKDLQ 749

Query: 205 ---RALEMAIEAGAEDVKETEDEEERNVFKFICDASSLHQVRKKL 246
               +L   IE   +  +  +++ E+++ + I       +V+ +L
Sbjct: 750 ITCDSLNKQIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQL 794


>gi|87299628 biorientation of chromosomes in cell division 1-like
            [Homo sapiens]
          Length = 3051

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 119  KSTIETALKM--EKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADI--RHILNKNGGV 174
            K  +ET LKM  +   DT ++   + P  S L +   ++ S+K  A++  R I N +G  
Sbjct: 2880 KYPVETTLKMKDDSKTDTGIVTVEQSPSSSKLKVMQ-TDESNKETANLQERSISNDDGEE 2938

Query: 175  MAVGARHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEE 226
              V +     +K    + V D + ++   ER  + ++    ED KE E +EE
Sbjct: 2939 KIVTSVRRRGRKPKRSLTVSD-DAESSEPERKRQKSVSDPVEDKKEQESDEE 2989


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 26   AAPPRDPRPSHPEPRGCGAAPGRTL 50
            A PP  PRP  P P  C A P R+L
Sbjct: 2379 AQPPLTPRPQPPPPESCCALPPRSL 2403


>gi|239757152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/45 (37%), Positives = 19/45 (42%)

Query: 4   WAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGR 48
           W    L  A       R  G+  +PPR  RPS P   GCG A  R
Sbjct: 139 WGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAGSR 183


>gi|239754873 PREDICTED: similar to hCG2040393 [Homo sapiens]
          Length = 333

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 11  RAAARCLLARGPGVRAAPPRDPRPSHP-----EPRGCGAAPGRTLHFTAAVPAGHNKWSK 65
           R   R    R PG  A   + P+PS P     EP   GA  G +LHF    P G      
Sbjct: 47  RGLCRSTGKRRPGHTAPRTQQPKPSGPSSHPREPPLPGAVTGGSLHFQEPPPLGAATAGS 106

Query: 66  VRHIKGPKDVERSR 79
               K P    R R
Sbjct: 107 RHRQKPPSPGSRHR 120


>gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo
           sapiens]
          Length = 235

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/45 (37%), Positives = 19/45 (42%)

Query: 4   WAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGR 48
           W    L  A       R  G+  +PPR  RPS P   GCG A  R
Sbjct: 139 WGRGCLELAGPGPPCGRLRGLGPSPPRAARPSVPAAAGCGWAGSR 183


>gi|239749412 PREDICTED: hypothetical protein XP_002347031 [Homo
           sapiens]
          Length = 333

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 11  RAAARCLLARGPGVRAAPPRDPRPSHP-----EPRGCGAAPGRTLHFTAAVPAGHNKWSK 65
           R   R    R PG  A   + P+PS P     EP   GA  G +LHF    P G      
Sbjct: 47  RGLCRSTGKRRPGHTAPRTQQPKPSGPSSHPREPPLPGAVTGGSLHFQEPPPLGAATAGS 106

Query: 66  VRHIKGPKDVERSR 79
               K P    R R
Sbjct: 107 RHRQKPPSPGSRHR 120


>gi|239743547 PREDICTED: hypothetical protein XP_002342883 [Homo
           sapiens]
          Length = 333

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 11  RAAARCLLARGPGVRAAPPRDPRPSHP-----EPRGCGAAPGRTLHFTAAVPAGHNKWSK 65
           R   R    R PG  A   + P+PS P     EP   GA  G +LHF    P G      
Sbjct: 47  RGLCRSTGKRRPGHTAPRTQQPKPSGPSSHPREPPLPGAVTGGSLHFQEPPPLGAATAGS 106

Query: 66  VRHIKGPKDVERSR 79
               K P    R R
Sbjct: 107 RHRQKPPSPGSRHR 120


>gi|31982906 cingulin-like 1 [Homo sapiens]
          Length = 1302

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 190 VVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLHQVRK 244
           +V     EK+AV+  RALE  +EA   ++ +T  E+++   K   ++    Q+R+
Sbjct: 880 LVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLKEESEQKEQLRR 934


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,773,239
Number of Sequences: 37866
Number of extensions: 644260
Number of successful extensions: 3524
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 3468
Number of HSP's gapped (non-prelim): 102
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.