LOC100293249 22171

Name: LOC100293249	Sequence: fasta or formatted (333aa)		NCBI GI: 239754873
Description: PREDICTED: similar to hCG2040393		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 24 2 C cysteine 3.3 11 1 D aspartate 1.8 6 1 E glutamate 6.6 22 2 F phenylalanine 3.3 11 4 G glycine 12.6 42 2 H histidine 5.7 19 3 I isoleucine 0.9 3 1 K lysine 1.5 5 1 L leucine 6.3 21 2 M methionine 0.6 2 1 N asparagine 0.6 2 1 P proline 13.2 44 4 Q glutamine 4.8 16 2 R arginine 9.6 32 3 S serine 9.0 30 3 T threonine 7.2 24 2 V valine 3.3 11 1 W tryptophan 1.5 5 1 Y tyrosine 0.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2040393 LOC100291245 1.000 PREDICTED: hypothetical protein XP_002347031 LOC100287846 1.000 PREDICTED: hypothetical protein XP_002342883 PTCH1 0.096 patched isoform S PTCH1 0.096 patched isoform S PTCH1 0.096 patched isoform S PTCH1 0.096 patched isoform S PTCH1 0.096 patched isoform L' PTCH1 0.096 patched isoform M PTCH1 0.096 patched isoform L COL3A1 0.043 collagen type III alpha 1 preproprotein PRB4 0.043 proline-rich protein BstNI subfamily 4 precursor [Ho... PRB1 0.040 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB3 0.036 proline-rich protein BstNI subfamily 3 precursor [H... WIPF1 0.034 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.034 WAS/WASL interacting protein family, member 1 PRB2 0.034 proline-rich protein BstNI subfamily 2 COL1A1 0.033 alpha 1 type I collagen preproprotein COL2A1 0.033 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.033 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL17A1 0.033 alpha 1 type XVII collagen PRB1 0.033 proline-rich protein BstNI subfamily 1 isoform 3 pre... WASL 0.032 Wiskott-Aldrich syndrome gene-like protein PRB1 0.032 proline-rich protein BstNI subfamily 1 isoform 2 pre... COL27A1 0.032 collagen, type XXVII, alpha 1 SFPQ 0.032 splicing factor proline/glutamine rich (polypyrimidin... NACA 0.032 nascent polypeptide-associated complex alpha subuni... COL9A2 0.030 alpha 2 type IX collagen RERE 0.030 atrophin-1 like protein isoform b RERE 0.030 atrophin-1 like protein isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.