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Search of human proteins with 26787993
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|26787993 stonin 1 [Homo sapiens]
(735 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|26787993 stonin 1 [Homo sapiens] 1513 0.0
gi|29553944 STON1-GTF2A1L protein [Homo sapiens] 1464 0.0
gi|21361863 stonin 2 [Homo sapiens] 406 e-113
gi|14210504 adaptor-related protein complex 1, mu 1 subunit isof... 73 8e-13
gi|194473724 adaptor-related protein complex 1, mu 1 subunit iso... 70 9e-12
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo... 63 9e-10
gi|68799814 adaptor-related protein complex 2, mu 1 subunit isof... 61 4e-09
gi|14917109 adaptor-related protein complex 2, mu 1 subunit isof... 61 4e-09
gi|54860079 nadrin isoform 1 [Homo sapiens] 45 2e-04
gi|54860105 nadrin isoform 2 [Homo sapiens] 45 2e-04
gi|223468617 family with sequence similarity 75, member C1 [Homo... 40 0.006
gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Hom... 40 0.006
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 39 0.023
gi|183396783 BCL-6 interacting corepressor isoform a [Homo sapiens] 37 0.050
gi|183396787 BCL-6 interacting corepressor isoform c [Homo sapiens] 37 0.050
gi|183396785 BCL-6 interacting corepressor isoform b [Homo sapiens] 37 0.050
gi|21071037 BCL-6 interacting corepressor isoform a [Homo sapiens] 37 0.050
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 37 0.066
gi|28559039 mediator complex subunit 1 [Homo sapiens] 37 0.066
gi|38787970 tensin like C1 domain containing phosphatase isoform... 37 0.066
gi|38787957 tensin like C1 domain containing phosphatase isoform... 37 0.066
gi|38787941 tensin like C1 domain containing phosphatase isoform... 37 0.066
gi|16418357 ankyrin repeat domain 40 [Homo sapiens] 37 0.066
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 37 0.086
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 36 0.15
gi|116292174 fidgetin-like 2 [Homo sapiens] 35 0.19
gi|29294655 melanoma antigen family C, 3 isoform 2 [Homo sapiens] 35 0.19
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 35 0.25
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 35 0.25
>gi|26787993 stonin 1 [Homo sapiens]
Length = 735
Score = 1513 bits (3918), Expect = 0.0
Identities = 735/735 (100%), Positives = 735/735 (100%)
Query: 1 MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSST 60
MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSST
Sbjct: 1 MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSST 60
Query: 61 PLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGE 120
PLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGE
Sbjct: 61 PLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGE 120
Query: 121 SSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQSDDLPQFQYFREDC 180
SSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQSDDLPQFQYFREDC
Sbjct: 121 SSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQSDDLPQFQYFREDC 180
Query: 181 AFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQKSLNKCSLNYICEKLEHLQSAE 240
AFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQKSLNKCSLNYICEKLEHLQSAE
Sbjct: 181 AFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQKSLNKCSLNYICEKLEHLQSAE 240
Query: 241 NQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGWSFMLRIPEKKNMMSSRQWGPIFLK 300
NQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGWSFMLRIPEKKNMMSSRQWGPIFLK
Sbjct: 241 NQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGWSFMLRIPEKKNMMSSRQWGPIFLK 300
Query: 301 VLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPKVENFSVAGKIHTVKIEHVSYTEKRKY 360
VLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPKVENFSVAGKIHTVKIEHVSYTEKRKY
Sbjct: 301 VLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPKVENFSVAGKIHTVKIEHVSYTEKRKY 360
Query: 361 HSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTTVEEELMKLPAVSKPKKNYEEQEISLEIV 420
HSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTTVEEELMKLPAVSKPKKNYEEQEISLEIV
Sbjct: 361 HSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTTVEEELMKLPAVSKPKKNYEEQEISLEIV 420
Query: 421 DNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDESYYEKDSEKKGI 480
DNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDESYYEKDSEKKGI
Sbjct: 421 DNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDESYYEKDSEKKGI 480
Query: 481 DILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAY 540
DILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAY
Sbjct: 481 DILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAY 540
Query: 541 VELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRR 600
VELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRR
Sbjct: 541 VELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRR 600
Query: 601 ACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSD 660
ACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSD
Sbjct: 601 ACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSD 660
Query: 661 QEIPSDWYPFATVQFSVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQVEIEKKWIK 720
QEIPSDWYPFATVQFSVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQVEIEKKWIK
Sbjct: 661 QEIPSDWYPFATVQFSVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQVEIEKKWIK 720
Query: 721 IDGEDPDKIGDCITQ 735
IDGEDPDKIGDCITQ
Sbjct: 721 IDGEDPDKIGDCITQ 735
>gi|29553944 STON1-GTF2A1L protein [Homo sapiens]
Length = 1182
Score = 1464 bits (3789), Expect = 0.0
Identities = 712/720 (98%), Positives = 716/720 (99%)
Query: 1 MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSST 60
MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSST
Sbjct: 1 MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSST 60
Query: 61 PLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGE 120
PLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGE
Sbjct: 61 PLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGE 120
Query: 121 SSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQSDDLPQFQYFREDC 180
SSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQSDDLPQFQYFREDC
Sbjct: 121 SSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQSDDLPQFQYFREDC 180
Query: 181 AFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQKSLNKCSLNYICEKLEHLQSAE 240
AFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQKSLNKCSLNYICEKLEHLQSAE
Sbjct: 181 AFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQKSLNKCSLNYICEKLEHLQSAE 240
Query: 241 NQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGWSFMLRIPEKKNMMSSRQWGPIFLK 300
NQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGWSFMLRIPEKKNMMSSRQWGPIFLK
Sbjct: 241 NQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGWSFMLRIPEKKNMMSSRQWGPIFLK 300
Query: 301 VLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPKVENFSVAGKIHTVKIEHVSYTEKRKY 360
VLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPKVENFSVAGKIHTVKIEHVSYTEKRKY
Sbjct: 301 VLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPKVENFSVAGKIHTVKIEHVSYTEKRKY 360
Query: 361 HSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTTVEEELMKLPAVSKPKKNYEEQEISLEIV 420
HSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTTVEEELMKLPAVSKPKKNYEEQEISLEIV
Sbjct: 361 HSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTTVEEELMKLPAVSKPKKNYEEQEISLEIV 420
Query: 421 DNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDESYYEKDSEKKGI 480
DNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDESYYEKDSEKKGI
Sbjct: 421 DNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDESYYEKDSEKKGI 480
Query: 481 DILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAY 540
DILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAY
Sbjct: 481 DILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAY 540
Query: 541 VELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRR 600
VELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRR
Sbjct: 541 VELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRR 600
Query: 601 ACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSD 660
ACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSD
Sbjct: 601 ACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSD 660
Query: 661 QEIPSDWYPFATVQFSVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQVEIEKKWIK 720
QEIPSDWYPFATVQFSVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQ ++ + I+
Sbjct: 661 QEIPSDWYPFATVQFSVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQPKLYRSVIE 720
>gi|21361863 stonin 2 [Homo sapiens]
Length = 905
Score = 406 bits (1044), Expect = e-113
Identities = 209/462 (45%), Positives = 306/462 (66%), Gaps = 10/462 (2%)
Query: 269 RSQPKSGWSFMLRIPEKKNMMSSRQWGPIFLKVLPGGILQMYYEQGLEKPFKEIQLDPYC 328
RSQP+ GW MLRIPEKKN+MSSR WGPIF+K+ G LQ+YYEQGLEKPF+E +L+
Sbjct: 421 RSQPRDGWPMMLRIPEKKNIMSSRHWGPIFVKLTDTGYLQLYYEQGLEKPFREFKLEICH 480
Query: 329 RLSEPKVENFSVAGKIHTVKIEHVSYTEKRKYHSKTEVVHEPDIEQMLKLGSTSYHDFLD 388
+SEP+++N+ G+IH+++I+ V+Y EK+KY K V H + EQ++KLG+T+Y DFL
Sbjct: 481 EISEPRLQNYDENGRIHSLRIDRVTYKEKKKYQPKPAVAHTAEREQVIKLGTTNYDDFLS 540
Query: 389 FLTTVEEELMKLPAVSKPKK----NYEEQEISLEIVDNFWGKVTK-EGKFVESAVITQIY 443
F+ V++ LM LP +S NY E+EI++++ D F G V+K + + ++ V+T+I+
Sbjct: 541 FIHAVQDRLMDLPVLSMDLSTVGLNYLEEEITVDVRDEFSGIVSKGDNQILQHHVLTRIH 600
Query: 444 CLCFVNGNLECFLTLNDLELPKRDESYYEKD----SEKKGIDILDYHFHKCVNVQEFEQS 499
L F++G EC L LND+ L K +E +D + K I + + FH CV+ F S
Sbjct: 601 ILSFLSGLAECRLGLNDI-LVKGNEIVLRQDIMPTTTTKWIKLHECRFHGCVDEDVFHNS 659
Query: 500 RIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAYVELQAFVNMASLAQRSSYA 559
R+I F PLDACRFELMRF+T++ LPF+L++ V GA VE+Q+++ M++ +
Sbjct: 660 RVILFNPLDACRFELMRFRTVFAEKTLPFTLRTATSVNGAEVEVQSWLRMSTGFSANRDP 719
Query: 560 GSLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRRACLGSLQELESEPVIQVTV 619
+ C+N+ I +PVPS+W+K ++ +KSLKAK+NR A GS SEPV++VT+
Sbjct: 720 LTQVPCENVMIRYPVPSEWVKNFRRESVLGEKSLKAKVNRGASFGSTSVSGSEPVMRVTL 779
Query: 620 GSAKYESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSDQEIPSDWYPFATVQFSVPD 679
G+AKYE A+ ++VW+I+RLPDKNS+ HPHC LELGSD+E+PS + V+FS+P
Sbjct: 780 GTAKYEHAFNSIVWRINRLPDKNSASGHPHCFFCHLELGSDREVPSRFANHVNVEFSMPT 839
Query: 680 TCASRTEVRSLGVESDVQPQKHVQQRACYNIQVEIEKKWIKI 721
T AS+ VRS+ VE +K V A Y+ QV + W+ +
Sbjct: 840 TSASKASVRSISVEDKTDVRKWVNYSAHYSYQVALGSIWLML 881
Score = 30.8 bits (68), Expect = 4.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 14/56 (25%)
Query: 3 STNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTS 58
+T+ +WV+F+++P FP +QG G + +LPGL P S S+S
Sbjct: 9 ATHQSEWVSFNEEPP---------FPAHSQG-----GTEEHLPGLSSSPDQSESSS 50
>gi|14210504 adaptor-related protein complex 1, mu 1 subunit isoform
2 [Homo sapiens]
Length = 423
Score = 73.2 bits (178), Expect = 8e-13
Identities = 67/283 (23%), Positives = 110/283 (38%), Gaps = 51/283 (18%)
Query: 410 YEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDES 469
Y + E+ L+++++ V+ G + S ++ I F++G E L LND L
Sbjct: 166 YRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGR 225
Query: 470 YYEKDSEKKGIDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFS 529
+ K +++ D FH+CV + FE R I F+P D FELM ++ N P
Sbjct: 226 -----GKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDG-EFELMSYR--LNTHVKPLI 277
Query: 530 LKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMNLQR 589
V+ + ++ ++ + S +R S A +N+ IH PVP+
Sbjct: 278 WIESVIEKHSHSRIEYMIKAKSQFKRRSTA------NNVEIHIPVPND------------ 319
Query: 590 QKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLDHPH 649
P + TVGS K+ +VW I P L H
Sbjct: 320 --------------------ADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAH 359
Query: 650 CLSYKLELGSDQEIPSDWYPFATVQFSVPDTCASRTEVRSLGV 692
L S + + P +V+F +P S +VR L +
Sbjct: 360 -----FGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKI 397
>gi|194473724 adaptor-related protein complex 1, mu 1 subunit
isoform 1 [Homo sapiens]
Length = 435
Score = 69.7 bits (169), Expect = 9e-12
Identities = 70/295 (23%), Positives = 112/295 (37%), Gaps = 63/295 (21%)
Query: 410 YEEQEISLEIVD--NFWGK----------VTKEGKFVESAVITQIYCLCFVNGNLECFLT 457
Y + E+ L++++ N GK V+ G + S ++ I F++G E L
Sbjct: 166 YRKNEVFLDVIESVNLLGKYPGVGWLGHTVSANGNVLRSEIVGSIKMRVFLSGMPELRLG 225
Query: 458 LNDLELPKRDESYYEKDSEKKGIDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRF 517
LND L + K +++ D FH+CV + FE R I F+P D FELM +
Sbjct: 226 LNDKVLFDNTGR-----GKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDG-EFELMSY 279
Query: 518 KTLYNGDNLPFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQ 577
+ N P V+ + ++ ++ + S +R S A +N+ IH PVP+
Sbjct: 280 R--LNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQFKRRSTA------NNVEIHIPVPND 331
Query: 578 WIKALWTMNLQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDR 637
P + TVGS K+ +VW I
Sbjct: 332 --------------------------------ADSPKFKTTVGSVKWVPENSEIVWSIKS 359
Query: 638 LPDKNSSLDHPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCASRTEVRSLGV 692
P L H L S + + P +V+F +P S +VR L +
Sbjct: 360 FPGGKEYLMRAH-----FGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKI 409
>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
sapiens]
Length = 423
Score = 63.2 bits (152), Expect = 9e-10
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 57/286 (19%)
Query: 410 YEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLND---LELPKR 466
Y++ E+ ++++++ V G + S ++ I F++G E L LND EL R
Sbjct: 166 YKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGR 225
Query: 467 DESYYEKDSEKKGIDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNL 526
S+ K +++ D FH+CV + F+ R I F+P D FELM ++ +
Sbjct: 226 --------SKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDG-DFELMSYR--LSTQVK 274
Query: 527 PFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMN 586
P V+ + ++ ++ V ++ S A + + I PVPS
Sbjct: 275 PLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVA------NGVEISVPVPSD--------- 319
Query: 587 LQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLD 646
P + +VGSAKY V+W I P L
Sbjct: 320 -----------------------ADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLM 356
Query: 647 HPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCASRTEVRSLGV 692
H L S ++ + P V+F +P S +VR + +
Sbjct: 357 RAH-----FGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKI 397
>gi|68799814 adaptor-related protein complex 2, mu 1 subunit isoform
b [Homo sapiens]
Length = 433
Score = 60.8 bits (146), Expect = 4e-09
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 51/273 (18%)
Query: 410 YEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLND-LELPKRDE 468
Y E+ L+++++ ++ +G+ + + V ++ +++G EC +ND + + K+ +
Sbjct: 166 YRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGK 225
Query: 469 SYYEKDSE--KKGIDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNL 526
++ S+ K+ I I D FH+CV + +F+ R I F+P D FELMR++T L
Sbjct: 226 GTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDG-EFELMRYRTT-KDIIL 283
Query: 527 PFSLKSVVVVQG-AYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTM 585
PF + +V G +E++ + +S++ SL + I + P P L T
Sbjct: 284 PFRVIPLVREVGRTKLEVKVVI-------KSNFKPSLLA-QKIEVRIPTP------LNTS 329
Query: 586 NLQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSL 645
+Q + G AKY+++ A+VWKI R+ S
Sbjct: 330 GVQ--------------------------VICMKGKAKYKASENAIVWKIKRMAGMKESQ 363
Query: 646 DHPHCLSYKLELGSDQEIPSDWYPFATVQFSVP 678
+S ++EL + P ++ F VP
Sbjct: 364 -----ISAEIELLPTNDKKKWARPPISMNFEVP 391
>gi|14917109 adaptor-related protein complex 2, mu 1 subunit isoform
a [Homo sapiens]
Length = 435
Score = 60.8 bits (146), Expect = 4e-09
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 51/273 (18%)
Query: 410 YEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLND-LELPKRDE 468
Y E+ L+++++ ++ +G+ + + V ++ +++G EC +ND + + K+ +
Sbjct: 168 YRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGK 227
Query: 469 SYYEKDSE--KKGIDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNL 526
++ S+ K+ I I D FH+CV + +F+ R I F+P D FELMR++T L
Sbjct: 228 GTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDG-EFELMRYRTT-KDIIL 285
Query: 527 PFSLKSVVVVQG-AYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTM 585
PF + +V G +E++ + +S++ SL + I + P P L T
Sbjct: 286 PFRVIPLVREVGRTKLEVKVVI-------KSNFKPSLLA-QKIEVRIPTP------LNTS 331
Query: 586 NLQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSL 645
+Q + G AKY+++ A+VWKI R+ S
Sbjct: 332 GVQ--------------------------VICMKGKAKYKASENAIVWKIKRMAGMKESQ 365
Query: 646 DHPHCLSYKLELGSDQEIPSDWYPFATVQFSVP 678
+S ++EL + P ++ F VP
Sbjct: 366 -----ISAEIELLPTNDKKKWARPPISMNFEVP 393
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 45.4 bits (106), Expect = 2e-04
Identities = 43/132 (32%), Positives = 53/132 (40%), Gaps = 22/132 (16%)
Query: 53 GSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDS 112
G S+S T P + SP PP+ SP S PT+ PG P A + + P SSS S
Sbjct: 652 GGQSSSGTSQHPPSL----SPKPPTRSP-SPPTQHTGQPPGQPSAPSQLSAPRRYSSSLS 706
Query: 113 PLAISGGESSLLPTRPTCLSHA-----------LLPSDHSCTHP--TPKVGLPDEVNPQQ 159
P+ PT+ T L H LPS+H P TP P P
Sbjct: 707 PIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTP----PQTPTPPS 762
Query: 160 AESLGFQSDDLP 171
LG Q+ LP
Sbjct: 763 TPPLGKQNPSLP 774
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 45.4 bits (106), Expect = 2e-04
Identities = 43/132 (32%), Positives = 53/132 (40%), Gaps = 22/132 (16%)
Query: 53 GSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDS 112
G S+S T P + SP PP+ SP S PT+ PG P A + + P SSS S
Sbjct: 574 GGQSSSGTSQHPPSL----SPKPPTRSP-SPPTQHTGQPPGQPSAPSQLSAPRRYSSSLS 628
Query: 113 PLAISGGESSLLPTRPTCLSHA-----------LLPSDHSCTHP--TPKVGLPDEVNPQQ 159
P+ PT+ T L H LPS+H P TP P P
Sbjct: 629 PIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTP----PQTPTPPS 684
Query: 160 AESLGFQSDDLP 171
LG Q+ LP
Sbjct: 685 TPPLGKQNPSLP 696
>gi|223468617 family with sequence similarity 75, member C1 [Homo
sapiens]
Length = 1188
Score = 40.4 bits (93), Expect = 0.006
Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 30/150 (20%)
Query: 51 PSGSSSTSSTPL--SSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPES 108
P G+S +S P+ ++PIV SP P + P + PG P +
Sbjct: 143 PDGASRSSHEPMEDAAPIVSPLASPDPRTKHPQDLASTPPPG---------------PMT 187
Query: 109 SSDSPLAISGG-ESSLLPTRPTCLSHALLPSDH------SCTHPTPKVGLPDEVN----- 156
+S S L+ S E SLL RP+ AL P +C+ P PK P +
Sbjct: 188 TSVSSLSASQPPEPSLLLERPSPEPPALFPHPPHTPDPLACSPPPPKGFTPPPLRDSTLL 247
Query: 157 -PQQAESLGFQSDDLPQFQYFREDCAFSSP 185
P +S+ D +PQ RED A S P
Sbjct: 248 TPSHCDSVALPLDTVPQSLSPREDLAASVP 277
>gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Homo
sapiens]
Length = 453
Score = 40.4 bits (93), Expect = 0.006
Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 20/197 (10%)
Query: 401 PAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLND 460
P +S ++ E+ L++V+ + G ++ V +I F+ E + L
Sbjct: 173 PVLSSRSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLT- 231
Query: 461 LELPKRDESYYEKDSEKKG----IDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMR 516
E + SE +G I + + FH VN+ EFE RI++ P +MR
Sbjct: 232 -------EEFCVGKSELRGYGPGIRVDEVSFHSSVNLDEFESHRILRLQPPQG-ELTVMR 283
Query: 517 FKTLYN-GDNLPFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVP 575
++ + LPF L V LQ ++ + S A N+R+H P+P
Sbjct: 284 YQLSDDLPSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLLSKSQA------LNVRLHLPLP 337
Query: 576 SQWIKALWTMNLQRQKS 592
+ ++ QK+
Sbjct: 338 RGVVSLSQELSSPEQKA 354
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 38.5 bits (88), Expect = 0.023
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 44 LPGLREFPSGSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLY 103
L G + G+ + ST P+ +SPGPPS + PT P G P+
Sbjct: 811 LEGQKYCYRGTGAAVSTR-PGPLPTTQYSPGPPSGATALPPTSAAPSAQGSPQ------- 862
Query: 104 PIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAES 162
P +SS S + SGG + R +P + T P P + LP P ++ES
Sbjct: 863 --PSASSSSQFSTSGGPWA----RERRAGEEPVPGPMTPTQPPPPLSLP----PARSES 911
>gi|183396783 BCL-6 interacting corepressor isoform a [Homo sapiens]
Length = 1721
Score = 37.4 bits (85), Expect = 0.050
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 52 SGSSSTSSTPLSSPIVDFYFSP-GPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSS 110
S S+S+ S+P F + G P +S +P + F P IP +++ YP PE +
Sbjct: 609 SSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRS-PPIPYPRSYLPYPAPEGIA 667
Query: 111 DSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQ 166
SPL++ G+ + P + +L P H PK GLP + + E + +Q
Sbjct: 668 VSPLSLH-GKGPVYPHPVLLPNGSLFPG-----HLAPKPGLPYGLPTGRPEFVTYQ 717
>gi|183396787 BCL-6 interacting corepressor isoform c [Homo sapiens]
Length = 1755
Score = 37.4 bits (85), Expect = 0.050
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 52 SGSSSTSSTPLSSPIVDFYFSP-GPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSS 110
S S+S+ S+P F + G P +S +P + F P IP +++ YP PE +
Sbjct: 609 SSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRS-PPIPYPRSYLPYPAPEGIA 667
Query: 111 DSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQ 166
SPL++ G+ + P + +L P H PK GLP + + E + +Q
Sbjct: 668 VSPLSLH-GKGPVYPHPVLLPNGSLFPG-----HLAPKPGLPYGLPTGRPEFVTYQ 717
>gi|183396785 BCL-6 interacting corepressor isoform b [Homo sapiens]
Length = 1703
Score = 37.4 bits (85), Expect = 0.050
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 52 SGSSSTSSTPLSSPIVDFYFSP-GPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSS 110
S S+S+ S+P F + G P +S +P + F P IP +++ YP PE +
Sbjct: 609 SSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRS-PPIPYPRSYLPYPAPEGIA 667
Query: 111 DSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQ 166
SPL++ G+ + P + +L P H PK GLP + + E + +Q
Sbjct: 668 VSPLSLH-GKGPVYPHPVLLPNGSLFPG-----HLAPKPGLPYGLPTGRPEFVTYQ 717
>gi|21071037 BCL-6 interacting corepressor isoform a [Homo sapiens]
Length = 1721
Score = 37.4 bits (85), Expect = 0.050
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 52 SGSSSTSSTPLSSPIVDFYFSP-GPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSS 110
S S+S+ S+P F + G P +S +P + F P IP +++ YP PE +
Sbjct: 609 SSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRS-PPIPYPRSYLPYPAPEGIA 667
Query: 111 DSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQ 166
SPL++ G+ + P + +L P H PK GLP + + E + +Q
Sbjct: 668 VSPLSLH-GKGPVYPHPVLLPNGSLFPG-----HLAPKPGLPYGLPTGRPEFVTYQ 717
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.0 bits (84), Expect = 0.066
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 23/119 (19%)
Query: 46 GLREFPSGSSSTSS--TPLSSPIVDFYFSPGPPSN--SPLSTPTKDFPGFPGIPKAGTHV 101
G E+P G+ S +PL++PI++ SP P +N P P P PG P
Sbjct: 955 GELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASP 1014
Query: 102 LYPIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSD---HSCTHPTPKVGLPDEVNP 157
+ P SPL L H+L+P + C+ P + +P ++P
Sbjct: 1015 ILMEPLPPQCSPL----------------LQHSLVPQNSPPSQCSPPALPLSVPSPLSP 1057
Score = 33.9 bits (76), Expect = 0.56
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 28 PLENQGVCRPNGLKLNLPGLREFPSGSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKD 87
P E + P P E P S +PLS P SP PP +SP+S P ++
Sbjct: 584 PPEESPMSPPPEASRLFPPFEESPL-SPPPEESPLSPPPEASRLSP-PPEDSPMSPPPEE 641
Query: 88 FPGFPGIPKAGTHVLYPIPESS------SDSPLAISGGESSLLPTRPTCLSHALLPSDHS 141
P P P+ L P+P S +SPL+ ES P P S P + S
Sbjct: 642 SPMSPP-PEVSR--LSPLPVVSRLSPPPEESPLSPPPEESPTSP--PPEASRLSPPPEDS 696
Query: 142 CTHPTPK 148
T P P+
Sbjct: 697 PTSPPPE 703
Score = 31.6 bits (70), Expect = 2.8
Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 22/150 (14%)
Query: 13 DDDPAVQSSQKSKNFPLENQGVCRPN------GLKLNLPGLREFPSGSSSTSSTPLSSPI 66
++ P + S PLE + P L+ L E S +PLS P
Sbjct: 499 EESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPP 558
Query: 67 VDFYFSPGP--------PSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISG 118
+ SP P P SP+S P ++ P P P + + P E SPL+
Sbjct: 559 EELPTSPPPEASRLSPPPEESPMSPPPEESPMSP--PPEASRLFPPFEE----SPLSPPP 612
Query: 119 GESSLLPTRPTCLSHALLPSDHSCTHPTPK 148
ES L P P S P + S P P+
Sbjct: 613 EESPLSP--PPEASRLSPPPEDSPMSPPPE 640
Score = 31.6 bits (70), Expect = 2.8
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Query: 58 SSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGF---PGIPKAGTHVLYPIPESSSDSPL 114
S TPL P F P N P S+P +PG P + + DSP
Sbjct: 1917 SRTPLQRP---FLQGGLPLGNLPSSSPMDSYPGLCQSPFLDSRERGGFFSPEPGEPDSPW 1973
Query: 115 AISGGESSLLPTRPT 129
SGG + PT PT
Sbjct: 1974 TGSGGTTPSTPTTPT 1988
Score = 30.4 bits (67), Expect = 6.1
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 51 PSGSSSTSSTP-LSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESS 109
P G + P L +P+ + PP SPLS P ++ P P P+A L P PE
Sbjct: 418 PLGKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPP-PEASR--LSPPPEEL 474
Query: 110 SDSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPK 148
SPL +L +RP S P + S P P+
Sbjct: 475 PASPL-----PEALHLSRPLEESPLSPPPEESPLSPPPE 508
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 37.0 bits (84), Expect = 0.066
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 17/134 (12%)
Query: 21 SQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSSTP-----------LSSPIVDF 69
S +SKN +Q +P + GL SGSSST P LS P +
Sbjct: 1140 SSQSKN---SSQSGGKPGSSPITKHGLS---SGSSSTKMKPQGKPSSLMNPSLSKPNISP 1193
Query: 70 YFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGESSLLPTRPT 129
S P + L++P K PG P KA + + S + SG +SS
Sbjct: 1194 SHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSG 1253
Query: 130 CLSHALLPSDHSCT 143
LS PS +SCT
Sbjct: 1254 SLSQKTPPSSNSCT 1267
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 37.0 bits (84), Expect = 0.066
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 48 REFPSGSSST---SSTPL--SSPIVDFYFSPGPPSNSPLSTPTKDF-PG--FPGIPKAGT 99
R+ P +SS STPL SSP+ + + SP S PT+ PG P + +AGT
Sbjct: 771 RDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQRLSPGEALPPVSQAGT 830
Query: 100 HVLYPIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHS 141
+P S PLA S + P+ P+ P HS
Sbjct: 831 GKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHS 872
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 37.0 bits (84), Expect = 0.066
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 48 REFPSGSSST---SSTPL--SSPIVDFYFSPGPPSNSPLSTPTKDF-PG--FPGIPKAGT 99
R+ P +SS STPL SSP+ + + SP S PT+ PG P + +AGT
Sbjct: 895 RDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQRLSPGEALPPVSQAGT 954
Query: 100 HVLYPIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHS 141
+P S PLA S + P+ P+ P HS
Sbjct: 955 GKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHS 996
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 37.0 bits (84), Expect = 0.066
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 48 REFPSGSSST---SSTPL--SSPIVDFYFSPGPPSNSPLSTPTKDF-PG--FPGIPKAGT 99
R+ P +SS STPL SSP+ + + SP S PT+ PG P + +AGT
Sbjct: 905 RDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQRLSPGEALPPVSQAGT 964
Query: 100 HVLYPIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHS 141
+P S PLA S + P+ P+ P HS
Sbjct: 965 GKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHS 1006
>gi|16418357 ankyrin repeat domain 40 [Homo sapiens]
Length = 368
Score = 37.0 bits (84), Expect = 0.066
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 587 LQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLD 646
L QK + ++ A LG ++E++ V V S + + + W R +
Sbjct: 4 LLEQKEQQERLREAAALGDIREVQKLVESGVDVNSQNEVNGWTCLHWACKR--------N 55
Query: 647 HPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCASRTEVRS-LGVESD 695
H +SY L+ G+D+EI T + +P SR E+R +GVE +
Sbjct: 56 HGQVVSYLLKSGADKEI-------LTTKGEMPVQLTSRREIRKIMGVEEE 98
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 36.6 bits (83), Expect = 0.086
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 51 PSGSSSTSSTPLSSPIVDFYFSPGPP---SNSPLSTPTKDFPGFPGIPKAGTHVLYPIPE 107
P+G S + P P D +P PP S +P PT D G P +P G P+P
Sbjct: 565 PTGDSEATPVP---PTGDSETAPVPPTGDSGAPPVPPTGD-SGAPPVPPTGDSGAPPVPP 620
Query: 108 S-SSDSPLAISGGESSLLPTRPTCLSHA--LLPSDHSCTHPTPKVG 150
+ S +P G+S P PT S A + P+ S P P G
Sbjct: 621 TGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTG 666
Score = 32.0 bits (71), Expect = 2.1
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 10/106 (9%)
Query: 51 PSGSSSTSSTPLSSPIVDFYFSPGPP---SNSPLSTPTKDFPGFPGIPKAGTHVLYPIPE 107
P+G S P P D P PP S +P PT D G P +P G P+P
Sbjct: 598 PTGDSGAPPVP---PTGDSGAPPVPPTGDSGAPPVPPTGD-SGAPPVPPTGDSGAPPVPP 653
Query: 108 SS-SDSPLAISGGESSLLPTRPT--CLSHALLPSDHSCTHPTPKVG 150
+ S +P G+S P PT + P+ S P P G
Sbjct: 654 TGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTG 699
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 36.2 bits (82), Expect = 0.11
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 60 TPLSSPIVDFYFSPGP-----PSNSPL-STPTKDFPGFPGIPKAGTHVLYPIPESSSDSP 113
TP +P+V + GP P++SP+ + D P P P A + V P + +DSP
Sbjct: 122 TPADNPVVPVTSANGPVIPVTPADSPVFPVASADGPVVPVTP-ADSPVF---PVTPADSP 177
Query: 114 L-AISGGESSLLPTRPT-CLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGFQSDDLP 171
L ++ +S L P P + + P+D H TP G V P + + S D P
Sbjct: 178 LFPVTPADSPLFPVTPADSAAIPVTPADGPVVHVTPANGTVVPVTPADSPVVTVASTDSP 237
Score = 33.9 bits (76), Expect = 0.56
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 45 PGLREFPSGSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTK-DFPGFPGIPKAGTHVLY 103
P L P+ S + TP SPIV P P+N P+ T D P P IP G V
Sbjct: 536 PVLSVTPAESPAIPVTPADSPIV-----PVTPANGPVVPVTSADSPFVPVIPADGPVVPV 590
Query: 104 P------IPESSSDSP-LAISGGESSLLPTRP 128
+P + +DSP L+++ +S +P P
Sbjct: 591 TPADSPVVPVTPADSPVLSVTLADSPAVPVTP 622
Score = 32.0 bits (71), Expect = 2.1
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 22/96 (22%)
Query: 51 PSGSSSTSSTPLSSPIVDFYFSPGPPSN-SPLSTPTKDFPGFPGIPKAGTHVL------- 102
P+ S TP + P+V P PP+N S + + P P IP G VL
Sbjct: 2310 PADSPVVPVTPANIPVV-----PVPPANGSVVPVTSAGSPFVPIIPADGLVVLDSSTDVL 2364
Query: 103 ---------YPIPESSSDSPLAISGGESSLLPTRPT 129
P+P+ + D ++++ +S ++P PT
Sbjct: 2365 VVLVSPTDGIPVPDLADDPVVSVTTSDSPVIPVTPT 2400
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 35.8 bits (81), Expect = 0.15
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 52 SGSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSD 111
+ + S +S+PL+SP SP PPS S +S P P P A P+P +S++
Sbjct: 487 NSAGSGASSPLTSPS-----SPTPPSTSGISALPPPPP--PPPPPAA-----PLPPASTE 534
Query: 112 SPL-----AISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVG 150
+P A++G L + L +C H PK+G
Sbjct: 535 APAQLSSQAVNGMSRGALLSSIQNFQKGTLRKAKTCDHSAPKIG 578
>gi|116292174 fidgetin-like 2 [Homo sapiens]
Length = 653
Score = 35.4 bits (80), Expect = 0.19
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Query: 7 GKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSSTPLSSPI 66
G++ + +PA ++P + G CR NG + PG E SG PL
Sbjct: 276 GRYRKYAYEPAKAPVADGASYPAADNGECRGNGFRAKPPGAAEEASGKYG-GGVPLK--- 331
Query: 67 VDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGESSLLPT 126
G P P P + FP P+ G + +P S ++P + G L+ +
Sbjct: 332 -----VLGSPVYGPQLEPFEKFPERAPAPRGG----FAVP--SGETPKGVDPGALELVTS 380
Query: 127 R 127
+
Sbjct: 381 K 381
>gi|29294655 melanoma antigen family C, 3 isoform 2 [Homo sapiens]
Length = 346
Score = 35.4 bits (80), Expect = 0.19
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 50 FPSGSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESS 109
FPS SS +SS+PLSSP+ PS L P + +P AG + P+P+S
Sbjct: 51 FPSSSSLSSSSPLSSPL---------PSTLILGVPEDE-----DMPAAG---MPPLPQSP 93
Query: 110 SDSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQAESLGF---- 165
+ P G + P P S P D SC+ P L +E + ++ ++ +
Sbjct: 94 PEIP---PQGPPKISPQGPP-QSPPQSPLD-SCSSPLLWTRLDEESSSEEEDTATWHALP 148
Query: 166 QSDDLPQF 173
+S+ LP++
Sbjct: 149 ESESLPRY 156
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 35.0 bits (79), Expect = 0.25
Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 14/149 (9%)
Query: 37 PNGLKLNLPGLREFPSGS-SSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIP 95
PN + P L P S ST++TP+ S PGP + +TPT PG
Sbjct: 310 PNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAATPT---PGPTPRS 366
Query: 96 KAGTHVLY--------PIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTP 147
G+ + +P S+S S + S S+ L + L L P+ ++PTP
Sbjct: 367 TLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNSASLSSVFAGLPLPLPPTSQGLSNPTP 426
Query: 148 KVGLPDEVNPQQAESLGFQSDDLPQFQYF 176
+ P A LG S L + F
Sbjct: 427 VIA--GGSTPSVAGPLGVNSPLLSALKGF 453
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 35.0 bits (79), Expect = 0.25
Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 14/149 (9%)
Query: 37 PNGLKLNLPGLREFPSGS-SSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIP 95
PN + P L P S ST++TP+ S PGP + +TPT PG
Sbjct: 332 PNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAATPT---PGPTPRS 388
Query: 96 KAGTHVLY--------PIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTP 147
G+ + +P S+S S + S S+ L + L L P+ ++PTP
Sbjct: 389 TLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNSASLSSVFAGLPLPLPPTSQGLSNPTP 448
Query: 148 KVGLPDEVNPQQAESLGFQSDDLPQFQYF 176
+ P A LG S L + F
Sbjct: 449 VIA--GGSTPSVAGPLGVNSPLLSALKGF 475
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,309,674
Number of Sequences: 37866
Number of extensions: 1584306
Number of successful extensions: 5168
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 4976
Number of HSP's gapped (non-prelim): 291
length of query: 735
length of database: 18,247,518
effective HSP length: 110
effective length of query: 625
effective length of database: 14,082,258
effective search space: 8801411250
effective search space used: 8801411250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.