Search of human proteins with 25777680

Search of human proteins with 25777680

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25777680 Ras association domain family 1 isoform B [Homo
sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25777684 Ras association domain family 1 isoform D [Homo sapi...   378   e-105
gi|25777682 Ras association domain family 1 isoform C [Homo sapi...   378   e-105
gi|20149588 Ras association domain family 1 isoform A [Homo sapi...   378   e-105
gi|25777680 Ras association domain family 1 isoform B [Homo sapi...   378   e-105
gi|32996735 Ras association (RalGDS/AF-6) domain family 5 isofor...   211   4e-55
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor...   211   4e-55
gi|30039698 Ras association (RalGDS/AF-6) domain family member 3...   150   5e-37
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor...   117   5e-27
gi|23510360 Ras association domain family 4 [Homo sapiens]             62   3e-10
gi|25777677 Ras association domain family 2 [Homo sapiens]             62   4e-10
gi|7661964 Ras association domain family 2 [Homo sapiens]              62   4e-10
gi|41393610 Ras association (RalGDS/AF-6) domain family 6 isofor...    59   2e-09
gi|29789443 Ras association (RalGDS/AF-6) domain family 6 isofor...    59   2e-09
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    35   0.038
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    33   0.11 
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora...    33   0.11 
gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens]                     31   0.73 
gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens]                     31   0.73 
gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens]                     31   0.73 
gi|191252814 RIMS binding protein 3B [Homo sapiens]                    30   1.2  
gi|191252806 RIMS binding protein 3C [Homo sapiens]                    30   1.2  
gi|153792195 DKFZP434H0735 protein [Homo sapiens]                      30   1.2  
gi|33342268 hypothetical protein LOC91300 [Homo sapiens]               30   1.2  
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s...    29   2.8  
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]              29   2.8  
gi|148612805 pigeon homolog [Homo sapiens]                             28   3.6  
gi|154354979 myosin X [Homo sapiens]                                   28   4.7  
gi|157057545 sorting nexin 18 isoform a [Homo sapiens]                 27   8.0  
gi|13540513 oxysterol binding protein 2 isoform a [Homo sapiens]       27   8.0  
gi|22095331 hypothetical protein LOC23065 [Homo sapiens]               27   8.0  

>gi|25777684 Ras association domain family 1 isoform D [Homo
           sapiens]
          Length = 344

 Score =  378 bits (970), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60
           MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV
Sbjct: 156 MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 215

Query: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 120
           KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL
Sbjct: 216 KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 275

Query: 121 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 180
           AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ
Sbjct: 276 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 335

Query: 181 EALHACPLG 189
           EALHACPLG
Sbjct: 336 EALHACPLG 344


>gi|25777682 Ras association domain family 1 isoform C [Homo
           sapiens]
          Length = 270

 Score =  378 bits (970), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60
           MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV
Sbjct: 82  MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 141

Query: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 120
           KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL
Sbjct: 142 KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 201

Query: 121 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 180
           AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ
Sbjct: 202 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 261

Query: 181 EALHACPLG 189
           EALHACPLG
Sbjct: 262 EALHACPLG 270


>gi|20149588 Ras association domain family 1 isoform A [Homo
           sapiens]
          Length = 340

 Score =  378 bits (970), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60
           MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV
Sbjct: 152 MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 211

Query: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 120
           KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL
Sbjct: 212 KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 271

Query: 121 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 180
           AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ
Sbjct: 272 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 331

Query: 181 EALHACPLG 189
           EALHACPLG
Sbjct: 332 EALHACPLG 340


>gi|25777680 Ras association domain family 1 isoform B [Homo
           sapiens]
          Length = 189

 Score =  378 bits (970), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60
           MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV
Sbjct: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60

Query: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 120
           KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL
Sbjct: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 120

Query: 121 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 180
           AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ
Sbjct: 121 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 180

Query: 181 EALHACPLG 189
           EALHACPLG
Sbjct: 181 EALHACPLG 189


>gi|32996735 Ras association (RalGDS/AF-6) domain family 5 isoform C
           [Homo sapiens]
          Length = 265

 Score =  211 bits (536), Expect = 4e-55
 Identities = 103/183 (56%), Positives = 139/183 (75%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60
           M L++DG+YTGFIKV LKL RPV+VP+  +P S+ DA +      +  +RTSFYLP DA+
Sbjct: 75  MKLSEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSFYLPLDAI 134

Query: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 120
           K LH+ S T   EVI+ LL+KF+VVD+P+KFALF+R  + GQV  +KL   ++PL LRLL
Sbjct: 135 KQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLYLRLL 194

Query: 121 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 180
           AGP  + LSFVLKEN++GEV WDAFS+PEL NFL IL++EE++ ++Q+ +KY   RQK++
Sbjct: 195 AGPDTEVLSFVLKENETGEVEWDAFSIPELQNFLTILEKEEQDKIQQVQKKYDKFRQKLE 254

Query: 181 EAL 183
           EAL
Sbjct: 255 EAL 257


>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform A
           [Homo sapiens]
          Length = 418

 Score =  211 bits (536), Expect = 4e-55
 Identities = 103/183 (56%), Positives = 139/183 (75%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60
           M L++DG+YTGFIKV LKL RPV+VP+  +P S+ DA +      +  +RTSFYLP DA+
Sbjct: 228 MKLSEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSFYLPLDAI 287

Query: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLL 120
           K LH+ S T   EVI+ LL+KF+VVD+P+KFALF+R  + GQV  +KL   ++PL LRLL
Sbjct: 288 KQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLYLRLL 347

Query: 121 AGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQ 180
           AGP  + LSFVLKEN++GEV WDAFS+PEL NFL IL++EE++ ++Q+ +KY   RQK++
Sbjct: 348 AGPDTEVLSFVLKENETGEVEWDAFSIPELQNFLTILEKEEQDKIQQVQKKYDKFRQKLE 407

Query: 181 EAL 183
           EAL
Sbjct: 408 EAL 410


>gi|30039698 Ras association (RalGDS/AF-6) domain family member 3
           [Homo sapiens]
          Length = 238

 Score =  150 bits (380), Expect = 5e-37
 Identities = 87/185 (47%), Positives = 113/185 (61%), Gaps = 26/185 (14%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRP--VSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKD 58
           M+LN +G YTGFIKVQ++L +P   S  S K  PS                         
Sbjct: 71  MTLNSNGIYTGFIKVQMELCKPPQTSPNSGKLSPS----------------------SNG 108

Query: 59  AVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLR 118
            +  LH+ S     EVIEALL+KFLV + P KFAL++R  R  QVY  KL D E PL LR
Sbjct: 109 CMNTLHISSTNTVGEVIEALLKKFLVTESPAKFALYKRCHREDQVYACKLSDREHPLYLR 168

Query: 119 LLAGPSDKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQK 178
           L+AGP    LSFVL+E++ GE  W+AFS+PEL NFLRIL +EE+E L+ + ++Y+  RQK
Sbjct: 169 LVAGPRTDTLSFVLREHEIGE--WEAFSLPELQNFLRILDKEEDEQLQNLKRRYTAYRQK 226

Query: 179 IQEAL 183
           ++EAL
Sbjct: 227 LEEAL 231


>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform B
           [Homo sapiens]
          Length = 336

 Score =  117 bits (294), Expect = 5e-27
 Identities = 57/103 (55%), Positives = 76/103 (73%)

Query: 1   MSLNKDGSYTGFIKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGTSVRRRTSFYLPKDAV 60
           M L++DG+YTGFIKV LKL RPV+VP+  +P S+ DA +      +  +RTSFYLP DA+
Sbjct: 228 MKLSEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSFYLPLDAI 287

Query: 61  KHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQV 103
           K LH+ S T   EVI+ LL+KF+VVD+P+KFALF+R  + GQV
Sbjct: 288 KQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQV 330


>gi|23510360 Ras association domain family 4 [Homo sapiens]
          Length = 321

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)

Query: 39  RGPGRGTSVRR------------RTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVV 85
           R PG    +RR            +TS + P   +V ++ V S     +V+  LL KF V 
Sbjct: 154 RAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVE 213

Query: 86  DDPRKFALF---ERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSG---- 138
           D P +FAL+   E  ER       KL D E PL  R+L GP +K     L E D G    
Sbjct: 214 DGPSEFALYIVHESGER------TKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVP 267

Query: 139 --EVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCR----QKIQEALHA 185
                +  F MP L +F+  L+ EEE  + ++  K+   R    Q++++ + A
Sbjct: 268 HEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEA 320


>gi|25777677 Ras association domain family 2 [Homo sapiens]
          Length = 326

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 10/147 (6%)

Query: 44  GTSVRRRTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQ 102
           G     +TS + P   +V ++ + S     +V++ LL KF + +   +FAL+     H  
Sbjct: 173 GHFYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVV---HTS 229

Query: 103 VYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDS-GEVNWDA-----FSMPELHNFLRI 156
              +KL   + PL  R+L GP ++     L E D   EV +D      F MP L +F++ 
Sbjct: 230 GEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQK 289

Query: 157 LQREEEEHLRQILQKYSYCRQKIQEAL 183
           LQ EE+  ++++++KY+  R  I++ L
Sbjct: 290 LQEEEDREVKKLMRKYTVLRLMIRQRL 316


>gi|7661964 Ras association domain family 2 [Homo sapiens]
          Length = 326

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 10/147 (6%)

Query: 44  GTSVRRRTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAERHGQ 102
           G     +TS + P   +V ++ + S     +V++ LL KF + +   +FAL+     H  
Sbjct: 173 GHFYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVV---HTS 229

Query: 103 VYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDS-GEVNWDA-----FSMPELHNFLRI 156
              +KL   + PL  R+L GP ++     L E D   EV +D      F MP L +F++ 
Sbjct: 230 GEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQK 289

Query: 157 LQREEEEHLRQILQKYSYCRQKIQEAL 183
           LQ EE+  ++++++KY+  R  I++ L
Sbjct: 290 LQEEEDREVKKLMRKYTVLRLMIRQRL 316


>gi|41393610 Ras association (RalGDS/AF-6) domain family 6 isoform b
           [Homo sapiens]
          Length = 369

 Score = 58.9 bits (141), Expect = 2e-09
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 15/139 (10%)

Query: 44  GTSVRRRTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFAL---FERAER 99
           G      TS ++P  ++   + V S  R  EVI+ LL+KF + + P+ FAL   F   E+
Sbjct: 215 GHFYNHETSIFIPAFESETKVRVNSNMRTEEVIKQLLQKFKIENSPQDFALHIIFATGEQ 274

Query: 100 HGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSGEVNWDA-----FSMPELHNFL 154
                 R+L   + PL  RLL GPS+K     L + D+ E++ D      F    L + L
Sbjct: 275 ------RRLKKTDIPLLQRLLQGPSEKNARIFLMDKDAEEISSDVAQYINFHFSLLESIL 328

Query: 155 RILQREEEEHLRQILQKYS 173
           + L  EE+  +++I+ K++
Sbjct: 329 QRLNEEEKREIQRIVTKFN 347


>gi|29789443 Ras association (RalGDS/AF-6) domain family 6 isoform a
           [Homo sapiens]
          Length = 337

 Score = 58.9 bits (141), Expect = 2e-09
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 15/139 (10%)

Query: 44  GTSVRRRTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFAL---FERAER 99
           G      TS ++P  ++   + V S  R  EVI+ LL+KF + + P+ FAL   F   E+
Sbjct: 183 GHFYNHETSIFIPAFESETKVRVNSNMRTEEVIKQLLQKFKIENSPQDFALHIIFATGEQ 242

Query: 100 HGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSGEVNWDA-----FSMPELHNFL 154
                 R+L   + PL  RLL GPS+K     L + D+ E++ D      F    L + L
Sbjct: 243 ------RRLKKTDIPLLQRLLQGPSEKNARIFLMDKDAEEISSDVAQYINFHFSLLESIL 296

Query: 155 RILQREEEEHLRQILQKYS 173
           + L  EE+  +++I+ K++
Sbjct: 297 QRLNEEEKREIQRIVTKFN 315


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 4 isoform 2 [Homo
           sapiens]
          Length = 1651

 Score = 35.0 bits (79), Expect = 0.038
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 17/121 (14%)

Query: 59  AVKHLHVLSRTRAREVIEALLRKFL----VVDDPRKFALFERAERHGQVYLRKLLDDEQP 114
           A K + V S    ++VIE L  KF     ++  P K++L+E     G+   R+L  DE+P
Sbjct: 56  ATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSP-KYSLYE-VHVSGE---RRLDIDEKP 110

Query: 115 LRLRLLAGPSDKALSFVLK-ENDSGEVNWDAFSMPE-------LHNFLRILQREEEEHLR 166
           L ++L     D+   FVLK END+        + PE       + NF R L ++E++  +
Sbjct: 111 LVVQLNWNKDDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKK 170

Query: 167 Q 167
           +
Sbjct: 171 K 171


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 4 isoform 1 [Homo
           sapiens]
          Length = 1834

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 16/120 (13%)

Query: 59  AVKHLHVLSRTRAREVIEALLRKFL----VVDDPRKFALFERAERHGQVYLRKLLDDEQP 114
           A K + V S    ++VIE L  KF     ++  P K++L+E     G+   R+L  DE+P
Sbjct: 56  ATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSP-KYSLYE-VHVSGE---RRLDIDEKP 110

Query: 115 LRLRLLAGPSDKALSFVLK-ENDS----GEVNWDAFSMPE--LHNFLRILQREEEEHLRQ 167
           L ++L     D+   FVLK END+     + N       E  + NF R L ++E++  ++
Sbjct: 111 LVVQLNWNKDDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKK 170


>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 4 isoform 3 [Homo
           sapiens]
          Length = 1612

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 16/120 (13%)

Query: 59  AVKHLHVLSRTRAREVIEALLRKFL----VVDDPRKFALFERAERHGQVYLRKLLDDEQP 114
           A K + V S    ++VIE L  KF     ++  P K++L+E     G+   R+L  DE+P
Sbjct: 56  ATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSP-KYSLYE-VHVSGE---RRLDIDEKP 110

Query: 115 LRLRLLAGPSDKALSFVLK-ENDS----GEVNWDAFSMPE--LHNFLRILQREEEEHLRQ 167
           L ++L     D+   FVLK END+     + N       E  + NF R L ++E++  ++
Sbjct: 111 LVVQLNWNKDDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKK 170


>gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens]
          Length = 1137

 Score = 30.8 bits (68), Expect = 0.73
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 69  TRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKAL 128
           ++A E  + +  K+ V D  + F  F     HG VYL K L+   PLR +L      K L
Sbjct: 231 SKALESRDEVKTKWGVSDFIKAFIKF-----HGHVYLSKSLEKLSPLREKL--EEQFKRL 283

Query: 129 SFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEH 164
            F    N    V+    ++ +LH+ LR    E E+H
Sbjct: 284 LFQKAFNSQQLVHVTVINLFQLHH-LRDFSNETEQH 318


>gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens]
          Length = 1049

 Score = 30.8 bits (68), Expect = 0.73
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 69  TRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKAL 128
           ++A E  + +  K+ V D  + F  F     HG VYL K L+   PLR +L      K L
Sbjct: 189 SKALESRDEVKTKWGVSDFIKAFIKF-----HGHVYLSKSLEKLSPLREKL--EEQFKRL 241

Query: 129 SFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEH 164
            F    N    V+    ++ +LH+ LR    E E+H
Sbjct: 242 LFQKAFNSQQLVHVTVINLFQLHH-LRDFSNETEQH 276


>gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens]
          Length = 1091

 Score = 30.8 bits (68), Expect = 0.73
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 69  TRAREVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKAL 128
           ++A E  + +  K+ V D  + F  F     HG VYL K L+   PLR +L      K L
Sbjct: 231 SKALESRDEVKTKWGVSDFIKAFIKF-----HGHVYLSKSLEKLSPLREKL--EEQFKRL 283

Query: 129 SFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEH 164
            F    N    V+    ++ +LH+ LR    E E+H
Sbjct: 284 LFQKAFNSQQLVHVTVINLFQLHH-LRDFSNETEQH 318


>gi|191252814 RIMS binding protein 3B [Homo sapiens]
          Length = 1639

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 142 WDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALH 184
           W+A    EL      +QRE E  +RQ+L+     ++++Q+ LH
Sbjct: 80  WEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLH 122


>gi|191252806 RIMS binding protein 3C [Homo sapiens]
          Length = 1639

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 142 WDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALH 184
           W+A    EL      +QRE E  +RQ+L+     ++++Q+ LH
Sbjct: 80  WEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLH 122


>gi|153792195 DKFZP434H0735 protein [Homo sapiens]
          Length = 1639

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 142 WDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALH 184
           W+A    EL      +QRE E  +RQ+L+     ++++Q+ LH
Sbjct: 80  WEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLH 122


>gi|33342268 hypothetical protein LOC91300 [Homo sapiens]
          Length = 268

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 14/108 (12%)

Query: 38  RRGPGRGTSVRRRTSFYLPKDAVKHLH-----VLSRTR-AREVIEA----LLRKFLVVDD 87
           RRGPGRG   RR    Y P++  + +      VL R+R   E +E     LLR F V   
Sbjct: 147 RRGPGRGEDRRREDPAYTPRECFQRISRRLRAVLKRSRIPMETLETWEERLLRFFSVSPQ 206

Query: 88  PRKFAL----FERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFV 131
               A+    FER   H       L+     L  +     S++ L F+
Sbjct: 207 AVYTAMLDNSFERLLLHAVCQYMDLISASADLEGKRQMKVSNRHLDFL 254


>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
           sapiens]
          Length = 3014

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 26  PSSKKPPSLQDARRGPG----RGTSVRRRTSFYLP 56
           PS   PP+L +AR GP     RGTS R    F +P
Sbjct: 214 PSPPLPPNLPEARAGPARRARRGTSGRGSLKFPMP 248


>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
          Length = 609

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 11/95 (11%)

Query: 13  IKVQLKLVRPVSVPSSKKPPSLQDARRGPGRGT-----------SVRRRTSFYLPKDAVK 61
           ++  L+  +P  VP + +P   Q       +GT            V      ++ +DAVK
Sbjct: 45  LRQSLRRRKPAYVPEASRPHQWQADEDAVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVK 104

Query: 62  HLHVLSRTRAREVIEALLRKFLVVDDPRKFALFER 96
            L  + R   + V+        VVDD  K  L ++
Sbjct: 105 KLKAMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQ 139


>gi|148612805 pigeon homolog [Homo sapiens]
          Length = 854

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 98  ERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSGEVNWDAFSMPEL-HNFLRI 156
           +R    Y+R +LD+   +   L A      L+ +L+E DS +       + EL  +FLR 
Sbjct: 562 KRRSAAYVRNILDNAVKVISNLEARNLGPRLTPLLQEEDSHQRLLMGLMVSELKDHFLRH 621

Query: 157 LQREEEEHLRQILQKY 172
           LQ  E++ + Q++  Y
Sbjct: 622 LQGVEKKKIEQMVLDY 637


>gi|154354979 myosin X [Homo sapiens]
          Length = 2058

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 67   SRTRAREVIEALLRKFLVVDDPRKFALFE 95
            S T A EV+E L+R   + D    FALFE
Sbjct: 1718 SHTTAGEVVEKLIRGLAMEDSRNMFALFE 1746


>gi|157057545 sorting nexin 18 isoform a [Homo sapiens]
          Length = 624

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 146 SMPELHNFLRILQREEEEHLRQILQK----YSYCRQKIQEALH 184
           ++ E+H+F +I  R+ +  ++  LQ+    +    QK++EALH
Sbjct: 577 TLAEIHHFHQIRVRDFKSQMQHFLQQQIIFFQKVTQKLEEALH 619


>gi|13540513 oxysterol binding protein 2 isoform a [Homo sapiens]
          Length = 916

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 124 SDKALSFVLKENDSGEVNWDAFSMPELHN--FLRILQREEEE--HLRQILQKYSYCRQKI 179
           +++A  F +  N       D   + E+H+  + R LQ E+E+  HL + +++ +     +
Sbjct: 354 NERATLFRITSNAMINACRDFLELAEIHSRKWQRALQYEQEQRVHLEETIEQLAKQHNSL 413

Query: 180 QEALHACP 187
           + A H+ P
Sbjct: 414 ERAFHSAP 421


>gi|22095331 hypothetical protein LOC23065 [Homo sapiens]
          Length = 993

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 83  LVVDDPRKFALFERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSGEVNW 142
           L++DD  K   F          LR+L +    +   L+     +   + L+++ + E++W
Sbjct: 641 LLIDDEYKVTAFPATRN----VLRQLHELAPSIFFYLVDAEQGRLCGYRLRKDLTTELSW 696

Query: 143 DAFSMPELHNFLRILQREEEEHL 165
           +    PE+   +++  +   EH+
Sbjct: 697 ELTIPPEVQRIVKVKGKRSSEHV 719


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,583,970
Number of Sequences: 37866
Number of extensions: 330058
Number of successful extensions: 1221
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1187
Number of HSP's gapped (non-prelim): 32
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.