Guide to the Human Genome
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Name: RASSF4 Sequence: fasta or formatted (321aa) NCBI GI: 23510360
Description:

Ras association domain family 4

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         15           1
 C cysteine            2.2          7           1
 D aspartate           3.1         10           2
 E glutamate          10.3         33           4
 F phenylalanine       3.1         10           1
 G glycine             4.7         15           1
 H histidine           3.4         11           1
 I isoleucine          5.6         18           2
 K lysine              6.2         20           1
 L leucine            10.6         34           3
 M methionine          3.1         10           1
 N asparagine          2.8          9           1
 P proline             6.5         21           1
 Q glutamine           5.0         16           1
 R arginine            7.5         24           2
 S serine              8.4         27           2
 T threonine           5.0         16           2
 V valine              5.0         16           1
 W tryptophan          0.6          2           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras association domain family 4 
RASSF2                0.523   Ras association domain family 2 
RASSF2                0.523   Ras association domain family 2 
RASSF6                0.275   Ras association (RalGDS/AF-6) domain family 6 isofor...
RASSF6                0.275   Ras association (RalGDS/AF-6) domain family 6 isofor...
RASSF3                0.063   Ras association (RalGDS/AF-6) domain family member 3...
RASSF1                0.059   Ras association domain family 1 isoform D 
RASSF1                0.059   Ras association domain family 1 isoform C 
RASSF1                0.059   Ras association domain family 1 isoform A 
RASSF1                0.059   Ras association domain family 1 isoform B 
RASSF5                0.058   Ras association (RalGDS/AF-6) domain family 5 isofor...
RASSF5                0.058   Ras association (RalGDS/AF-6) domain family 5 isofor...
MLLT4                 0.021   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.021   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.021   myeloid/lymphoid or mixed-lineage leukemia (trithora...
RASSF5                0.019   Ras association (RalGDS/AF-6) domain family 5 isofor...
DCAF10                0.016   WD repeat domain 32 
SRRM1                 0.014   serine/arginine repetitive matrix 1 
TXNDC9                0.013   thioredoxin domain containing 9 
GYG2                  0.011   glycogenin 2 isoform a 
GYG2                  0.011   glycogenin 2 isoform b 
PALM2-AKAP2           0.011   PALM2-AKAP2 protein isoform 1 
ZNF777                0.011   zinc finger protein 777 
ZNF469                0.011   zinc finger protein 469 
MZF1                  0.011   zinc finger protein 42 isoform 2 
MZF1                  0.011   zinc finger protein 42 isoform 1 
ZSCAN5C               0.010   PREDICTED: zinc finger and SCAN domain containing 5...
ZSCAN5C               0.010   PREDICTED: zinc finger and SCAN domain containing 5...
ZSCAN5C               0.010   PREDICTED: zinc finger and SCAN domain containing 5...
SHANK2                0.010   SH3 and multiple ankyrin repeat domains 2 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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