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Search of human proteins with 254281345
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|254281345 RAB2B protein isoform 2 [Homo sapiens] 340 3e-94
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 340 3e-94
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 273 7e-74
gi|19923483 GTPase Rab14 [Homo sapiens] 184 4e-47
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 170 6e-43
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 166 1e-41
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 149 9e-37
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 147 4e-36
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 145 2e-35
gi|16933567 mel transforming oncogene [Homo sapiens] 144 4e-35
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 141 3e-34
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 141 3e-34
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 140 7e-34
gi|50234889 RAB43 protein [Homo sapiens] 139 1e-33
gi|39930371 RAB39, member RAS oncogene family [Homo sapiens] 139 1e-33
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 137 4e-33
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 137 4e-33
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 137 4e-33
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 137 6e-33
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] 135 1e-32
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 134 4e-32
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 133 6e-32
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 132 1e-31
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 132 2e-31
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 130 5e-31
gi|116812567 RAB25 [Homo sapiens] 129 2e-30
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 128 3e-30
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 125 1e-29
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 125 1e-29
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 125 2e-29
>gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
Length = 170
Score = 340 bits (873), Expect = 3e-94
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ
Sbjct: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE
Sbjct: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
Query: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 170
IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
Sbjct: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 170
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 340 bits (873), Expect = 3e-94
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ
Sbjct: 47 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 106
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE
Sbjct: 107 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 166
Query: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 170
IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
Sbjct: 167 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 273 bits (697), Expect = 7e-74
Identities = 137/172 (79%), Positives = 151/172 (87%), Gaps = 8/172 (4%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
M+ IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLT+WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
HS+SNMVIMLIGNKSDLESRR+VK+EEGEAFAREHGLIFMETSAKTA NVEEAFINTAKE
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYRKIQQGLFDVHNEANGIKIGPQQSI--STSVGPSASQRNSRDIGSNSGCC 170
IY KIQ+G+FD++NEANGIKIGPQ + +T G Q+ + GCC
Sbjct: 167 IYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQGGQQ------AGGGCC 212
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 184 bits (466), Expect = 4e-47
Identities = 90/169 (53%), Positives = 120/169 (71%), Gaps = 7/169 (4%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
++ + G++IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR
Sbjct: 52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
++ N VI+LIGNK+DLE++RDV EE + FA E+GL+F+E SAKT NVE+AF+ AK+
Sbjct: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
Query: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGC 169
IY+ IQ G D++ +G++ P P + S GC
Sbjct: 172 IYQNIQDGSLDLNAAESGVQHKPS-------APQGGRLTSEPQPQREGC 213
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 170 bits (430), Expect = 6e-43
Identities = 84/142 (59%), Positives = 107/142 (75%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
++N+ GK +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LT+WL DAR
Sbjct: 54 IINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM 113
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
+S N+VI+L GNK DL++ R+V E FA+E+ L+F+ETSA T NVEEAF+ A++
Sbjct: 114 LASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARK 173
Query: 121 IYRKIQQGLFDVHNEANGIKIG 142
I KI+ G D +GI+ G
Sbjct: 174 ILNKIESGELDPERMGSGIQYG 195
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 166 bits (419), Expect = 1e-41
Identities = 83/142 (58%), Positives = 103/142 (72%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
+VN+ GK +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDART 108
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
+S N+V++L GNK DL+ R+V E FA+E+ L+F+ETSA T NVEEAF+ A+
Sbjct: 109 LASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCART 168
Query: 121 IYRKIQQGLFDVHNEANGIKIG 142
I KI G D +GI+ G
Sbjct: 169 ILNKIDSGELDPERMGSGIQYG 190
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 149 bits (377), Expect = 9e-37
Identities = 70/151 (46%), Positives = 108/151 (71%), Gaps = 2/151 (1%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+ +DGK+IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +H
Sbjct: 50 IELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEH 109
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+SS++ M++GNK D+ +R V +E GE A ++G+ F+ETSAK++ NVEEAF A++I
Sbjct: 110 ASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDI 169
Query: 122 YRKIQQGLFDVHNEANG--IKIGPQQSISTS 150
K+ + + D ++ G +KI +S TS
Sbjct: 170 MTKLNRKMNDSNSAGAGGPVKITENRSKKTS 200
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 147 bits (371), Expect = 4e-36
Identities = 71/126 (56%), Positives = 91/126 (72%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+ +DGK IK QIWDTAGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R H
Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDH 112
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+ SN+VIML+GNKSDL R V +E AFA ++ L F+ETSA + NVEEAF N EI
Sbjct: 113 ADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
Query: 122 YRKIQQ 127
YR + Q
Sbjct: 173 YRIVSQ 178
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 145 bits (365), Expect = 2e-35
Identities = 70/126 (55%), Positives = 90/126 (71%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+ +DGK IK QIWDTAGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R H
Sbjct: 53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDH 112
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+ SN+VIML+GNKSDL R V +E AFA ++GL F+ETSA + NVE AF EI
Sbjct: 113 ADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172
Query: 122 YRKIQQ 127
YR + Q
Sbjct: 173 YRIVSQ 178
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 144 bits (363), Expect = 4e-35
Identities = 69/151 (45%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+ +DGK+IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +H
Sbjct: 50 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEH 109
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S+++ M++GNK D+ +R V +E GE A ++G+ FMETSAK NVE AF A++I
Sbjct: 110 ASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
Query: 122 YRKIQQGL--FDVHNEANGIKIGPQQSISTS 150
K+ + L G+KI P Q +S
Sbjct: 170 KAKMDKKLEGNSPQGSNQGVKITPDQQKRSS 200
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 141 bits (355), Expect = 3e-34
Identities = 63/121 (52%), Positives = 93/121 (76%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
+V +DG ++KLQIWDTAGQE FRS+T +YYR A LL+YDIT + +F+++ +WL + +
Sbjct: 71 VVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHE 130
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
++ ++VIML+GNK+D+ S R ++ E+GE ARE+G+ F+ETSAKT NVE AF+ AKE
Sbjct: 131 YAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKE 190
Query: 121 I 121
+
Sbjct: 191 L 191
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 141 bits (355), Expect = 3e-34
Identities = 63/121 (52%), Positives = 93/121 (76%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
+V +DG ++KLQIWDTAGQE FRS+T +YYR A LL+YDIT + +F+++ +WL + +
Sbjct: 64 VVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHE 123
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
++ ++VIML+GNK+D+ S R ++ E+GE ARE+G+ F+ETSAKT NVE AF+ AKE
Sbjct: 124 YAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKE 183
Query: 121 I 121
+
Sbjct: 184 L 184
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 140 bits (352), Expect = 7e-34
Identities = 61/123 (49%), Positives = 98/123 (79%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V+I+GK+IKLQ+WDTAGQE F++IT +YYRGA G +LVYDIT ++F ++ +W++ +++
Sbjct: 50 VDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEN 109
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S+ + +L+GNK D+E++R V++E+ + AREHG+ F ETSAK++ NV+EAF + A++I
Sbjct: 110 ASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
Query: 122 YRK 124
K
Sbjct: 170 LLK 172
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 139 bits (350), Expect = 1e-33
Identities = 75/169 (44%), Positives = 103/169 (60%), Gaps = 19/169 (11%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+ I GK++KLQIWDTAGQE FR+IT+SYYR A GA+L YDIT+R +F + W+ED R++
Sbjct: 60 LEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKY 119
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKE 120
+ SN+V +LIGNKSDL R+V E ++ A + ++ +ETSAK + NVEEAF+ A E
Sbjct: 120 AGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATE 179
Query: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGC 169
+ + LF + P Q NS+DIG GC
Sbjct: 180 LIMRHGGPLF------------------SEKSPDHIQLNSKDIGEGWGC 210
>gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 139 bits (350), Expect = 1e-33
Identities = 68/138 (49%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Query: 6 GKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH-SSS 64
GK+IKLQ+WDTAGQE FRSITRSYYR + G LV+DIT R +F H+ WLE+A+ +
Sbjct: 59 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPF 118
Query: 65 NMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 124
+V +L+G+K DL S+R V REE E + + G+ ++ETSAK A NVEE+F ++IY
Sbjct: 119 RIVFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYEL 178
Query: 125 IQQGLFDVHNEANGIKIG 142
I++G + + G+K G
Sbjct: 179 IKKGEICIQDGWEGVKSG 196
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 137 bits (345), Expect = 4e-33
Identities = 60/123 (48%), Positives = 96/123 (78%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V+I+GK+IKLQ+WDTAGQE F++IT +YYRGA G +L YDIT ++F ++ +W++ ++
Sbjct: 174 VDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMEN 233
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S+ + +L+GNK D+E++R V++E+ + AREHG+ F ETSAK++ NV+EAF + A++I
Sbjct: 234 ASAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
Query: 122 YRK 124
K
Sbjct: 294 LLK 296
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 137 bits (345), Expect = 4e-33
Identities = 60/123 (48%), Positives = 96/123 (78%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V+I+GK+IKLQ+WDTAGQE F++IT +YYRGA G +L YDIT ++F ++ +W++ ++
Sbjct: 174 VDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMEN 233
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S+ + +L+GNK D+E++R V++E+ + AREHG+ F ETSAK++ NV+EAF + A++I
Sbjct: 234 ASAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
Query: 122 YRK 124
K
Sbjct: 294 LLK 296
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 137 bits (345), Expect = 4e-33
Identities = 60/123 (48%), Positives = 96/123 (78%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V+I+GK+IKLQ+WDTAGQE F++IT +YYRGA G +L YDIT ++F ++ +W++ ++
Sbjct: 174 VDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMEN 233
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S+ + +L+GNK D+E++R V++E+ + AREHG+ F ETSAK++ NV+EAF + A++I
Sbjct: 234 ASAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
Query: 122 YRK 124
K
Sbjct: 294 LLK 296
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 137 bits (344), Expect = 6e-33
Identities = 63/123 (51%), Positives = 90/123 (73%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V + GK+IKLQIWDTAGQE F +IT SYYRGA G +LVYDIT ++F +++ WL + +H
Sbjct: 51 VELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
++ ++ ML+GNK D++ +R V + +G AREHG+ F ETSAK N+E+AF+ A++I
Sbjct: 111 ANEDVERMLLGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
Query: 122 YRK 124
RK
Sbjct: 171 LRK 173
>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
Length = 213
Score = 135 bits (341), Expect = 1e-32
Identities = 64/138 (46%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Query: 6 GKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH-SSS 64
GK+IKLQIWDTAGQE FRSITR+YYR + G LL++DIT R +F ++ WLE+ + H
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 65 NMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 124
+V +L+G+K DL+++R V R E E A +G+ ++ETSA+ A NVE+AF + ++IY
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYEL 174
Query: 125 IQQGLFDVHNEANGIKIG 142
+++G + G+K G
Sbjct: 175 VKRGEITIQEGWEGVKSG 192
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 134 bits (337), Expect = 4e-32
Identities = 65/140 (46%), Positives = 97/140 (69%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+ +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++
Sbjct: 53 IELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRY 112
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S N+ +L+GNK DL +++ V + FA G+ F+ETSAK A NVE++F+ A EI
Sbjct: 113 ASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
Query: 122 YRKIQQGLFDVHNEANGIKI 141
+++ G E + +KI
Sbjct: 173 KKRMGPGATAGGAEKSNVKI 192
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 133 bits (335), Expect = 6e-32
Identities = 60/124 (48%), Positives = 92/124 (74%)
Query: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
++++DG ++KLQ+WDTAGQE FRS+T +YYR A LL+YD+T + +F+++ +WL + +
Sbjct: 105 VLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHE 164
Query: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
++ ++ +ML+GNK D R VKRE+GE A+E+GL FMETSAKT NV+ AF AKE
Sbjct: 165 YAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKE 224
Query: 121 IYRK 124
+ ++
Sbjct: 225 LKQR 228
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 132 bits (332), Expect = 1e-31
Identities = 69/147 (46%), Positives = 101/147 (68%), Gaps = 8/147 (5%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+++DG + KL IWDTAGQE FR++T SYYRGA G +LVYD+TRR+TF L +WL + +
Sbjct: 50 ISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETY 109
Query: 62 SSSNMVI-MLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
+ N ++ ML+GNK D E+ R+V R EG FAR+H ++F+E SAKT V+ AF +E
Sbjct: 110 CTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAF----EE 164
Query: 121 IYRKIQQ--GLFDVHNEANGIKIGPQQ 145
+ KI Q GL++ N+ G+K+ ++
Sbjct: 165 LVEKIIQTPGLWESENQNKGVKLSHRE 191
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 132 bits (331), Expect = 2e-31
Identities = 62/127 (48%), Positives = 92/127 (72%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
+ +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E++ ++ WL++ ++
Sbjct: 50 IELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRY 109
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S N+ +L+GNKSDL +++ V + FA G+ F+ETSAK A NVE+AF+ A EI
Sbjct: 110 ASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
Query: 122 YRKIQQG 128
+++ G
Sbjct: 170 KKRMGPG 176
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 130 bits (327), Expect = 5e-31
Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
++IDGK++K+Q+WDTAGQE FR+IT+SYYR A A++ YD+TRR TF + W+ + ++
Sbjct: 59 LDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKY 118
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKE 120
++N+VIMLIGNK DL +R V E+ A ++GL+ +ETSAK + N+EE F+ AKE
Sbjct: 119 GAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKE 178
Query: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPS 154
+ + L+ + NG+ + + + GPS
Sbjct: 179 LIARNSLHLYG-ESALNGLPL-DSSPVLMAQGPS 210
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 129 bits (323), Expect = 2e-30
Identities = 59/119 (49%), Positives = 84/119 (70%)
Query: 9 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVI 68
+K QIWDTAG E +R+IT +YYRGA GALLV+D+T+ +T+ + WL++ H+ + +V+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 69 MLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 127
ML+GNKSDL R+V EE FA +GL+F+ETSA + NVE AF KEI+ K+ +
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK 179
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 128 bits (321), Expect = 3e-30
Identities = 62/149 (41%), Positives = 97/149 (65%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V +D +K +IWDTAGQE + S+ YYRGA A++VYDIT +ETF +W+++ ++
Sbjct: 62 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQ 121
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S ++VI L GNK+DL ++R V+ EE +A+A ++ L+FMETSAKTA NV + F+ AK++
Sbjct: 122 ASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
Query: 122 YRKIQQGLFDVHNEANGIKIGPQQSISTS 150
+ Q L + G+ + Q + S
Sbjct: 182 PKSEPQNLGGAAGRSRGVDLHEQSQQNKS 210
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 125 bits (315), Expect = 1e-29
Identities = 62/149 (41%), Positives = 93/149 (62%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V +D +K +IWDTAGQE + S+ YYRGA A++VYDIT +TF +W+++ ++
Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQ 122
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S N+VI L GNK+DL S+R V+ +E +A+A ++ L+FMETSAKTA NV E F+ AK++
Sbjct: 123 ASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
Query: 122 YRKIQQGLFDVHNEANGIKIGPQQSISTS 150
+ Q G+ + S S
Sbjct: 183 PKNEPQNATGAPGRNRGVDLQENNPASRS 211
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 125 bits (315), Expect = 1e-29
Identities = 62/149 (41%), Positives = 93/149 (62%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V +D +K +IWDTAGQE + S+ YYRGA A++VYDIT +TF +W+++ ++
Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQ 122
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 121
+S N+VI L GNK+DL S+R V+ +E +A+A ++ L+FMETSAKTA NV E F+ AK++
Sbjct: 123 ASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
Query: 122 YRKIQQGLFDVHNEANGIKIGPQQSISTS 150
+ Q G+ + S S
Sbjct: 183 PKNEPQNATGAPGRNRGVDLQENNPASRS 211
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 125 bits (314), Expect = 2e-29
Identities = 62/153 (40%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 2 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 61
V + GK+I+LQIWDTAGQE F SIT +YYR A G +LVYDIT++ETF+ L W++ ++
Sbjct: 84 VELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKY 143
Query: 62 SSSNMVIMLIGNKSDLESRRDVKREEGEAFARE-HGLIFMETSAKTACNVEEAFINTAKE 120
+S + ++L+GNK D E+ R++ R++GE FA++ G+ F E SAK NV+E F+ +
Sbjct: 144 ASEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDD 203
Query: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGP 153
I +K+ + + + + P+ I + P
Sbjct: 204 ILKKMPLDILRNELSNSILSLQPEPEIPPELPP 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,425,272
Number of Sequences: 37866
Number of extensions: 189498
Number of successful extensions: 849
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 563
Number of HSP's gapped (non-prelim): 230
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.