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Search of human proteins with 25286703
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25286703 hypothetical protein LOC90231 [Homo sapiens]
(634 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25286703 hypothetical protein LOC90231 [Homo sapiens] 1281 0.0
gi|169209690 PREDICTED: hypothetical protein LOC728138, partial ... 444 e-124
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.005
gi|71040090 regulatory factor X, 5 [Homo sapiens] 37 0.073
gi|4557843 regulatory factor X, 5 [Homo sapiens] 37 0.073
gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens] 35 0.28
gi|239754590 PREDICTED: similar to hCG1779533 [Homo sapiens] 33 0.80
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 33 0.80
gi|8394456 toll-like receptor 9 isoform A precursor [Homo sapiens] 32 1.4
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re... 32 1.8
gi|21359951 RNA binding motif protein 42 [Homo sapiens] 32 2.3
gi|21630285 PDZ domain containing 3 [Homo sapiens] 32 2.3
gi|40548403 decapping enzyme Dcp1b [Homo sapiens] 31 3.0
gi|157502171 sorting nexin 19 [Homo sapiens] 31 4.0
gi|110431364 GLIS family zinc finger 2 [Homo sapiens] 31 4.0
gi|226498192 atonal homolog 8 [Homo sapiens] 30 5.2
gi|239754263 PREDICTED: hypothetical protein [Homo sapiens] 30 6.8
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 30 6.8
gi|239748801 PREDICTED: hypothetical protein [Homo sapiens] 30 6.8
gi|239742838 PREDICTED: hypothetical protein XP_002342658 [Homo ... 30 6.8
gi|239740892 PREDICTED: hypothetical protein [Homo sapiens] 30 6.8
gi|239740821 PREDICTED: hypothetical protein XP_002344064 [Homo ... 30 6.8
gi|239740718 PREDICTED: hypothetical protein [Homo sapiens] 30 6.8
gi|239740668 PREDICTED: hypothetical protein [Homo sapiens] 30 6.8
gi|239513934 PREDICTED: hypothetical protein [Homo sapiens] 30 6.8
gi|63999576 solute carrier family 22, member 17 isoform b [Homo ... 30 6.8
gi|21361834 solute carrier family 22, member 17 isoform a [Homo ... 30 6.8
gi|4505531 oxysterol binding protein [Homo sapiens] 30 6.8
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 30 6.8
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 30 8.9
>gi|25286703 hypothetical protein LOC90231 [Homo sapiens]
Length = 634
Score = 1281 bits (3315), Expect = 0.0
Identities = 634/634 (100%), Positives = 634/634 (100%)
Query: 1 MWLQQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAGGLHLLPWSRGEPGAA 60
MWLQQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAGGLHLLPWSRGEPGAA
Sbjct: 1 MWLQQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAGGLHLLPWSRGEPGAA 60
Query: 61 EPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAANRLWVTPGEREPAVAP 120
EPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAANRLWVTPGEREPAVAP
Sbjct: 61 EPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAANRLWVTPGEREPAVAP 120
Query: 121 DFVPFVQLRPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPGPVAAGPGPASVSGLAAG 180
DFVPFVQLRPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPGPVAAGPGPASVSGLAAG
Sbjct: 121 DFVPFVQLRPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPGPVAAGPGPASVSGLAAG 180
Query: 181 SGRDCVLLQEDFLAHRGRPHVYLQRIQLNNPTERVAALQTVGPTAGPAPKAFTSTLEKVG 240
SGRDCVLLQEDFLAHRGRPHVYLQRIQLNNPTERVAALQTVGPTAGPAPKAFTSTLEKVG
Sbjct: 181 SGRDCVLLQEDFLAHRGRPHVYLQRIQLNNPTERVAALQTVGPTAGPAPKAFTSTLEKVG 240
Query: 241 DHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQVAPKTQLDETVLWVVHVSGPINPQVL 300
DHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQVAPKTQLDETVLWVVHVSGPINPQVL
Sbjct: 241 DHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQVAPKTQLDETVLWVVHVSGPINPQVL 300
Query: 301 KSKAAKELKALQDLARKEMLELLDMPAAELLQDHQLLWAQLFSPGVEMKKITDTHTPSGL 360
KSKAAKELKALQDLARKEMLELLDMPAAELLQDHQLLWAQLFSPGVEMKKITDTHTPSGL
Sbjct: 301 KSKAAKELKALQDLARKEMLELLDMPAAELLQDHQLLWAQLFSPGVEMKKITDTHTPSGL 360
Query: 361 TVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDHCFSGHATMHAENLWPGRLSSV 420
TVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDHCFSGHATMHAENLWPGRLSSV
Sbjct: 361 TVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDHCFSGHATMHAENLWPGRLSSV 420
Query: 421 QQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSFGGLQFTENHLQFQADPDVLHNS 480
QQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSFGGLQFTENHLQFQADPDVLHNS
Sbjct: 421 QQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSFGGLQFTENHLQFQADPDVLHNS 480
Query: 481 YALHGIRYKNDHINLAVLADAEGKPYLHVSVESRGQPVKIYACKAGCLDEPVELTSAPTG 540
YALHGIRYKNDHINLAVLADAEGKPYLHVSVESRGQPVKIYACKAGCLDEPVELTSAPTG
Sbjct: 481 YALHGIRYKNDHINLAVLADAEGKPYLHVSVESRGQPVKIYACKAGCLDEPVELTSAPTG 540
Query: 541 HTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAILAHDEHMAQQDPGLPFLFWFSVAS 600
HTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAILAHDEHMAQQDPGLPFLFWFSVAS
Sbjct: 541 HTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAILAHDEHMAQQDPGLPFLFWFSVAS 600
Query: 601 LITLFHLFLFKLIYNEYCGPGAKPLFRSKEDPSV 634
LITLFHLFLFKLIYNEYCGPGAKPLFRSKEDPSV
Sbjct: 601 LITLFHLFLFKLIYNEYCGPGAKPLFRSKEDPSV 634
>gi|169209690 PREDICTED: hypothetical protein LOC728138, partial
[Homo sapiens]
Length = 222
Score = 444 bits (1141), Expect = e-124
Identities = 216/222 (97%), Positives = 217/222 (97%)
Query: 413 WPGRLSSVQQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSFGGLQFTENHLQFQA 472
WPG LSSVQQILQLSDLWRLTLQK GCKGLVKVGAPGILQGMVLSFGGLQFTENHLQFQA
Sbjct: 1 WPGLLSSVQQILQLSDLWRLTLQKSGCKGLVKVGAPGILQGMVLSFGGLQFTENHLQFQA 60
Query: 473 DPDVLHNSYALHGIRYKNDHINLAVLADAEGKPYLHVSVESRGQPVKIYACKAGCLDEPV 532
DPDVL NSYALHGIRYKNDHINLAVLADAEGKPYLH SVESRGQPVKIYACKAGCLDEPV
Sbjct: 61 DPDVLQNSYALHGIRYKNDHINLAVLADAEGKPYLHESVESRGQPVKIYACKAGCLDEPV 120
Query: 533 ELTSAPTGHTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAILAHDEHMAQQDPGLPF 592
ELTSAPTGHTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAILAHDEHMAQQDPGLPF
Sbjct: 121 ELTSAPTGHTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAILAHDEHMAQQDPGLPF 180
Query: 593 LFWFSVASLITLFHLFLFKLIYNEYCGPGAKPLFRSKEDPSV 634
LFWFS+ASLITLFHLFLFKLIYNEYCGPGAKPL RSKEDPSV
Sbjct: 181 LFWFSLASLITLFHLFLFKLIYNEYCGPGAKPLCRSKEDPSV 222
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.4 bits (93), Expect = 0.005
Identities = 61/210 (29%), Positives = 70/210 (33%), Gaps = 35/210 (16%)
Query: 38 SGARRAAGGLHLLPWSRGEPGAAEPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGF 97
SG+ A G + G PGAA A G + G P P VPA A
Sbjct: 64 SGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 98 LAL----DVAANRLWVTPGEREPAVAPDFVPFVQLRPLSALAEAGEAVLLLREGLLRRVR 153
L + +A P A P+ P +P AG A L R G
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKP------AGPAALAARAG------ 171
Query: 154 CLQLGSPGPGPVAAGPGPASVSGLAAGSGRDCVLLQEDFLA---HRGRPHVYLQR----- 205
PGPGP GPGP G AG G L L H P V L
Sbjct: 172 ------PGPGP-GPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAA 224
Query: 206 -IQLNNPTERVAALQT---VGPTAGPAPKA 231
+ L P +QT VG A PAP A
Sbjct: 225 LLPLPKPAAPGTVIQTPPFVGAAAPPAPAA 254
Score = 30.8 bits (68), Expect = 4.0
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 40/182 (21%)
Query: 158 GSPGPGPVAAGPGPASVSGLAAGSGRDCVLLQEDFLAHRGRPHVYLQRIQLNNPTERVAA 217
G PGPG AA P P G+ A S + V + P Q + + P AA
Sbjct: 327 GQPGPGAAAAAPAP----GVKAESPKRVV---------QAAPPA-AQTLAASGPAS-TAA 371
Query: 218 LQTVGPT---AGPAPKAFTSTLEKVGDHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQ 274
+GPT A P+P A +P TPTGL A + ++R
Sbjct: 372 SMVIGPTMQGALPSPAAVPPP---------------APGTPTGLPKGAAGAVTQSLSRTP 416
Query: 275 VAP----KTQLDETVLWVVHVSGPINPQVLKSKAAKELKALQDLARKEMLELLDMPAAEL 330
A + L TVL P NP +++ +L L R E +LL +P L
Sbjct: 417 TATTSGIRATLTPTVLAPRLPQPPQNPTNIQN---FQLPPGMVLVRSENGQLLMIPQQAL 473
Query: 331 LQ 332
Q
Sbjct: 474 AQ 475
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 36.6 bits (83), Expect = 0.073
Identities = 52/162 (32%), Positives = 61/162 (37%), Gaps = 22/162 (13%)
Query: 38 SGARRAAGGLHLLPWSRGEPGAAEPSACLEAATRAW---RGLRERGEVVPLGPG-----V 89
+G GG H P A+P LEA T A RG R++ V PG V
Sbjct: 268 NGLENPEGGAHKKP-----ERLAQPPKDLEARTGAGPLARGERKKSVVESSAPGANNLQV 322
Query: 90 PALVANGFLALDVAANRLWVTPGEREPAVAPDFVPF---VQLRPLSALAEAGEAVLLLRE 146
ALVA L L A L P +AP V PLS+ A A A + +
Sbjct: 323 NALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPIIN 382
Query: 147 GLLRRVRCLQLGSPGPGPVAAGPG----PASVSGLAAGSGRD 184
+L V L PGPGP A PG P G G D
Sbjct: 383 MILPTVPALP--GPGPGPGRAPPGGLTQPRGTENREVGIGGD 422
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 36.6 bits (83), Expect = 0.073
Identities = 52/162 (32%), Positives = 61/162 (37%), Gaps = 22/162 (13%)
Query: 38 SGARRAAGGLHLLPWSRGEPGAAEPSACLEAATRAW---RGLRERGEVVPLGPG-----V 89
+G GG H P A+P LEA T A RG R++ V PG V
Sbjct: 268 NGLENPEGGAHKKP-----ERLAQPPKDLEARTGAGPLARGERKKSVVESSAPGANNLQV 322
Query: 90 PALVANGFLALDVAANRLWVTPGEREPAVAPDFVPF---VQLRPLSALAEAGEAVLLLRE 146
ALVA L L A L P +AP V PLS+ A A A + +
Sbjct: 323 NALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPIIN 382
Query: 147 GLLRRVRCLQLGSPGPGPVAAGPG----PASVSGLAAGSGRD 184
+L V L PGPGP A PG P G G D
Sbjct: 383 MILPTVPALP--GPGPGPGRAPPGGLTQPRGTENREVGIGGD 422
>gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens]
Length = 753
Score = 34.7 bits (78), Expect = 0.28
Identities = 49/143 (34%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 55 GEPGAAEPSACLEAATRAWRGLR-ERGEVVPLGPGVPALVA-----NGFLALDVAANRLW 108
G PGA +A LEAA R G VV PG P LVA G + D A
Sbjct: 121 GAPGARNTAAVLEAAQELLRNRPISLGHVVVAPPGAPGLVAALHIVGGTPSPDPAG---L 177
Query: 109 VTPGER-----EPAVAPDFVPFVQLRPLSALAEAGEAVLLLREGLLRRVRCL-QLGSPGP 162
VTP R EP P V PL L+EA +++ L LR R L LG P
Sbjct: 178 VTPRTRVSLGGEPPSEAQPQPEV---PLGGLSEAADSLRELLRLPLRYPRALTALGLAVP 234
Query: 163 -GPVAAGPGPASVSGLAAGSGRD 184
G + AGP + L R+
Sbjct: 235 RGVLLAGPPGVGKTQLVRAVARE 257
>gi|239754590 PREDICTED: similar to hCG1779533 [Homo sapiens]
Length = 248
Score = 33.1 bits (74), Expect = 0.80
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 129 RPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPGPVAAGPGPASV 174
RP +A ++A +A LL GL R C+ + SPGP + P P V
Sbjct: 142 RPQTASSQAFQAHLLPPNGLDRPSSCVTMASPGPAFASQRPSPNKV 187
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 33.1 bits (74), Expect = 0.80
Identities = 51/181 (28%), Positives = 69/181 (38%), Gaps = 22/181 (12%)
Query: 54 RGEPGAAEPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAANRLWVTP-G 112
RG PG ++ A++A G + G G+P V NG V R P G
Sbjct: 470 RGRPGRVAGASGRRGASQARGGTGRAPARLRRGRGMPGRVGNG-----VGEGRGASEPEG 524
Query: 113 EREPAVAPDF----VPFVQLRPLSALAE--AGEAVLLLREGLLRRVRCLQLGSPGPGPVA 166
E EP D F +L+ L LAE G + G+L R L + P
Sbjct: 525 EPEPRARADLEVLQAGFERLQSLPELAERLGGRCPGQVAHGVLARAGLL---AAAARPGL 581
Query: 167 AGPGPASVSGLAA---GSGRDCVLLQEDFLAHRGRPHVYLQRI-QLNNPTERVAALQTVG 222
AG G LAA G CV+ RG R+ ++ + +AAL T+G
Sbjct: 582 AGSGVQRALALAAAQLGGWTTCVVSPN---LRRGSRRAGNHRVREIEFGSALLAALNTLG 638
Query: 223 P 223
P
Sbjct: 639 P 639
>gi|8394456 toll-like receptor 9 isoform A precursor [Homo sapiens]
Length = 1032
Score = 32.3 bits (72), Expect = 1.4
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 24/124 (19%)
Query: 345 GVEMKKITDTHTPSGLTVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDHCFSGH 404
G ++K +T+ P+G + +SC+ ++P + ++ E L S +
Sbjct: 686 GNQLKALTNGSLPAGTRLRRL---DVSCNSISFVAPGFFSKAKELRELNL-------SAN 735
Query: 405 ATMHAENLWPGRLSSVQQILQLSD--------------LWRLTLQKRGCKGLVKVGAPGI 450
A ++ W G L+S QIL +S L + G VK G+PG
Sbjct: 736 ALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQ 795
Query: 451 LQGM 454
LQG+
Sbjct: 796 LQGL 799
>gi|38569493 potassium voltage-gated channel, subfamily H
(eag-related), member 3 [Homo sapiens]
Length = 1083
Score = 32.0 bits (71), Expect = 1.8
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 133 ALAEAGEAVLLLREGLLRRVRCLQL----GSPGPGPVAAGPGP--ASVSGL 177
A+ E E VL +REGL + +QL GP P A+G GP AS SGL
Sbjct: 884 AVTELSEQVLQMREGLQSLRQAVQLVLAPHREGPCPRASGEGPCPASTSGL 934
>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
Length = 480
Score = 31.6 bits (70), Expect = 2.3
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 113 EREPAVAPDFVPFVQLRPLSAL--AEAGEAVLLLREGLLRRVRCLQLGSPGP----GPVA 166
+R P + P FVP V R SAL A AG + LR V G PGP P+A
Sbjct: 152 QRAPILRPAFVPHVLQRADSALSSAAAGPRPMALRPPHQALVGPPLPGPPGPPMMLPPMA 211
Query: 167 AGPGP 171
PGP
Sbjct: 212 RAPGP 216
>gi|21630285 PDZ domain containing 3 [Homo sapiens]
Length = 491
Score = 31.6 bits (70), Expect = 2.3
Identities = 40/144 (27%), Positives = 57/144 (39%), Gaps = 18/144 (12%)
Query: 85 LGPGVPALVAN--------GFLALDVAANRLWV---TPGEREPAVAPDFVPFVQLRPLSA 133
LGPGV + + GF W+ T G E A P P +L ++
Sbjct: 149 LGPGVRPRLCHIVKDEGGFGFSVTHGNQGPFWLVLSTGGAAERAGVP---PGARLLEVNG 205
Query: 134 LAEAGEAVLLLREGLLRRVRCLQLGSPGPGPVAAG---PGPASVSGLAAGSGRDCVLLQE 190
L ++G+ V LL G +C QLG P P+A G P L G LL+E
Sbjct: 206 LWQSGQQVTLLVAGPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFLLRE 265
Query: 191 DFLAHRGRPHVYLQRIQLNNPTER 214
+ GRP +L + P ++
Sbjct: 266 E-KGLDGRPGQFLWEVDPGLPAKK 288
>gi|40548403 decapping enzyme Dcp1b [Homo sapiens]
Length = 617
Score = 31.2 bits (69), Expect = 3.0
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 37/267 (13%)
Query: 39 GARRAAGGLHLLPWSRGEPGAA---EPSACLEAATRAWRGLRERGEVVPLGPG-----VP 90
G + A+ +L + PGAA +PS A++ A R V P+ PG P
Sbjct: 345 GVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSRAPTSVTPVAPGKGLAQPP 404
Query: 91 ALVANGFLALDVAANRLWVTPGEREPAVAPDFVPFVQLRPLSALAEAGEAVLLLREGLLR 150
NG L ++ RE + P Q P+S ++ G + ++ + LL+
Sbjct: 405 QAYFNGSLPPQTVGHQ----AHGREQSTLPR-----QTLPISG-SQTGSSGVISPQELLK 454
Query: 151 RVRCLQL-----GSPGPGPVAAGPGPASVSGLAAGSGRDCVLLQEDFLAHRGRPHVYLQR 205
+++ +Q S P A P V ++G+G+ E ++
Sbjct: 455 KLQIVQQEQQLHASNRPALAAKFP----VLAQSSGTGKPL----ESWINKTPNTEQQTPL 506
Query: 206 IQLNNPTERVAALQTVGPTAGPAPKAF---TSTLEKVGDHQFLLYSGRSPPTPTGLVHLV 262
Q+ +P +R+ A T P+ +P F TS K + L G+ PP + L
Sbjct: 507 FQVISP-QRIPA--TAAPSLLMSPMVFAQPTSVPPKERESGLLPVGGQEPPAAATSLLLP 563
Query: 263 VVAAKKLVNRLQVAPKTQLDETVLWVV 289
+ + + V K QL E +L+++
Sbjct: 564 IQSPEPSVITSSPLTKLQLQEALLYLI 590
>gi|157502171 sorting nexin 19 [Homo sapiens]
Length = 992
Score = 30.8 bits (68), Expect = 4.0
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 13 LLSSSWARRLLCLLGLLLLLL--WFGGSGARRAAGGLHL 49
LL + W LLCLL LL++L W G S A A+G LHL
Sbjct: 44 LLVNVW---LLCLLSALLVVLGGWLGSSLAGVASGRLHL 79
>gi|110431364 GLIS family zinc finger 2 [Homo sapiens]
Length = 524
Score = 30.8 bits (68), Expect = 4.0
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 19/91 (20%)
Query: 94 ANGFLALDVAANRLWVTPGEREPAVAPDFVPFVQLRPLSALAEAGEAVLLLREGLLRRVR 153
A+G L + P + P APD P+V +G +++ L
Sbjct: 316 AHGHFVSHEQQELLQLRPPPKPPLPAPDGGPYV----------SGAQIIIPNPAAL---- 361
Query: 154 CLQLGSPG-PG-PVAAGPGPASVSGLAAGSG 182
G PG PG P+ PGP +S LA G+G
Sbjct: 362 ---FGGPGLPGLPLPLAPGPLDLSALACGNG 389
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 30.4 bits (67), Expect = 5.2
Identities = 65/225 (28%), Positives = 77/225 (34%), Gaps = 52/225 (23%)
Query: 7 LKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAGGLHLLPWSRGEPGAAEPSACL 66
+K +P L W + L L L G ARRA G R + A EP A
Sbjct: 1 MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANG----YKTFRLDLEAPEPRA-- 54
Query: 67 EAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAANRLWVTPGEREPAVAPDFVPFV 126
AT R R + VP+ VP VA V T GER + AP
Sbjct: 55 -VATNGLRDRTHRLQPVPVPVPVPVPVAPA-----VPPRGGTDTAGERGGSRAP------ 102
Query: 127 QLRPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPGPVAAGPGPASVSGLAAGSGRDCV 186
E +A R RC LG+ GPG P P A G +
Sbjct: 103 ---------EVSDA----------RKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQ 143
Query: 187 LLQEDFLAHRGRPHVYLQRIQLNNPTERVAALQTVGPTAGPAPKA 231
+E L RP RI L P R A P+A PAP A
Sbjct: 144 PFREPGL----RP-----RILLCAPPARPA------PSAPPAPPA 173
>gi|239754263 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 30.0 bits (66), Expect = 6.8
Identities = 40/109 (36%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Query: 37 GSGARRAAGGLHLLPWSRGEPGAAEPSACLEAATRAWRGLRERGEVVP---LGPGVPALV 93
G G R GGL P +RG GAA P+A A R RG R +P L P +P L
Sbjct: 121 GEGGRSPGGGLEPSPGARGAVGAA-PAA---ARHRKPRGRSRRAPQMPLRVLPPILPGLS 176
Query: 94 ----ANGFLALDVAANRLWVTPGEREPAVAPDF-VPFVQLRPLSALAEA 137
A G L L G + AV P VP ++ RP ALA A
Sbjct: 177 RAGGATGGRGLP-GRRGLPGRSGLQGAAVPPPVGVPSLRGRPWEALATA 224
>gi|239748801 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|239742838 PREDICTED: hypothetical protein XP_002342658 [Homo
sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|239740892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|239740821 PREDICTED: hypothetical protein XP_002344064 [Homo
sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|239740718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|239740668 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|239513934 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 154 CLQLGSPGPG---PVAAGPGPASVSG 176
C+ LG PGP P+A GPGP S G
Sbjct: 260 CMPLGPPGPPGGKPLAIGPGPRSPCG 285
>gi|63999576 solute carrier family 22, member 17 isoform b [Homo
sapiens]
Length = 520
Score = 30.0 bits (66), Expect = 6.8
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 170 GPASVSGLAAGSGRDCVLLQE--DFLAHRGRPHVYLQRIQLNNPTERV 215
GP V G AAGS + L+ FL VYL R++L +PT+R+
Sbjct: 139 GPCGVGGAAAGSSTGVMALRFLLGFLLAGVDLGVYLMRLELCDPTQRL 186
>gi|21361834 solute carrier family 22, member 17 isoform a [Homo
sapiens]
Length = 538
Score = 30.0 bits (66), Expect = 6.8
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 170 GPASVSGLAAGSGRDCVLLQE--DFLAHRGRPHVYLQRIQLNNPTERV 215
GP V G AAGS + L+ FL VYL R++L +PT+R+
Sbjct: 139 GPCGVGGAAAGSSTGVMALRFLLGFLLAGVDLGVYLMRLELCDPTQRL 186
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 30.0 bits (66), Expect = 6.8
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 158 GSPGPGP---VAAGPGPASVSGLAAGSG 182
G PGPG AAGP PA +G + GSG
Sbjct: 56 GGPGPGAGGVAAAGPAPAPPTGGSGGSG 83
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 30.0 bits (66), Expect = 6.8
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 159 SPGPGPVAAG-PGPASVSGLAAGS 181
SPGPGP+ A PGPA + G GS
Sbjct: 93 SPGPGPIPAPIPGPAQIPGPLPGS 116
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 29.6 bits (65), Expect = 8.9
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 149 LRRVRCL-QLGSPGPGPVAAGPGPASVSG---LAAGSGRDCVLLQEDFLAHRGRPHVYLQ 204
LR+ C + SP P P G G S S +A + R+C L+ L+ RG P
Sbjct: 348 LRKPPCFRESASPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSPRGPPTSEPP 407
Query: 205 RIQLNNP 211
+ N P
Sbjct: 408 PVPANKP 414
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,942,159
Number of Sequences: 37866
Number of extensions: 1425131
Number of successful extensions: 4936
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 4900
Number of HSP's gapped (non-prelim): 65
length of query: 634
length of database: 18,247,518
effective HSP length: 108
effective length of query: 526
effective length of database: 14,157,990
effective search space: 7447102740
effective search space used: 7447102740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.