Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 122114649

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122114649 zinc finger protein 3 isoform 1 [Homo sapiens]
         (131 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122114649 zinc finger protein 3 isoform 1 [Homo sapiens]           261   1e-70
gi|122114641 zinc finger protein 3 isoform 2 [Homo sapiens]           179   6e-46
gi|145701019 zinc finger protein 655 isoform b [Homo sapiens]          93   7e-20
gi|13129036 zinc finger protein 655 isoform b [Homo sapiens]           93   7e-20
gi|116089280 zinc finger protein 436 [Homo sapiens]                    76   7e-15
gi|20336724 zinc finger protein 333 [Homo sapiens]                     76   7e-15
gi|24308299 zinc finger protein 436 [Homo sapiens]                     76   7e-15
gi|11386193 zinc finger protein 197 isoform 1 [Homo sapiens]           76   9e-15
gi|72384335 zinc finger protein 311 [Homo sapiens]                     75   1e-14
gi|156627557 zinc finger protein 554 [Homo sapiens]                    75   2e-14
gi|157954634 zinc finger protein 34 [Homo sapiens]                     72   2e-13
gi|68800230 zinc finger protein 197 isoform 2 [Homo sapiens]           71   2e-13
gi|38045956 zinc finger protein 19 [Homo sapiens]                      71   3e-13
gi|89001105 zinc finger protein 571 [Homo sapiens]                     69   1e-12
gi|37693525 zinc finger protein 189 isoform 1 [Homo sapiens]           69   1e-12
gi|209954795 zinc finger protein 761 [Homo sapiens]                    68   2e-12
gi|210031219 zinc finger protein 845 [Homo sapiens]                    68   2e-12
gi|61676195 zinc finger protein 320 [Homo sapiens]                     68   2e-12
gi|37537689 zinc finger protein 354A [Homo sapiens]                    67   3e-12
gi|116875834 zinc finger protein 74 [Homo sapiens]                     67   4e-12
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]    67   4e-12
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]    67   4e-12
gi|153792259 zinc finger protein 778 [Homo sapiens]                    67   4e-12
gi|169213999 PREDICTED: similar to hCG1778601 isoform 1 [Homo sa...    67   5e-12
gi|169214410 PREDICTED: similar to hCG1778601 isoform 1 [Homo sa...    67   5e-12
gi|169213416 PREDICTED: hypothetical protein LOC388559 [Homo sap...    67   5e-12
gi|22748701 zinc finger protein 641 [Homo sapiens]                     67   5e-12
gi|8922744 zinc finger protein 701 [Homo sapiens]                      66   7e-12
gi|125490356 zinc finger protein 517 [Homo sapiens]                    66   7e-12
gi|149192841 zinc finger protein 527 [Homo sapiens]                    66   9e-12

>gi|122114649 zinc finger protein 3 isoform 1 [Homo sapiens]
          Length = 131

 Score =  261 bits (667), Expect = 1e-70
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYF 60
           METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYF
Sbjct: 1   METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYF 60

Query: 61  IRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCLTTQKVMLAWLTGTLSVAKGLCSS 120
           IRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCLTTQKVMLAWLTGTLSVAKGLCSS
Sbjct: 61  IRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCLTTQKVMLAWLTGTLSVAKGLCSS 120

Query: 121 ELASVEPPDTF 131
           ELASVEPPDTF
Sbjct: 121 ELASVEPPDTF 131


>gi|122114641 zinc finger protein 3 isoform 2 [Homo sapiens]
          Length = 446

 Score =  179 bits (454), Expect = 6e-46
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYF 60
          METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYF
Sbjct: 1  METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYF 60

Query: 61 IRKEWKRLEPAQRDLYRDVMLENYGNVFSLD 91
          IRKEWKRLEPAQRDLYRDVMLENYGNVFSLD
Sbjct: 61 IRKEWKRLEPAQRDLYRDVMLENYGNVFSLD 91


>gi|145701019 zinc finger protein 655 isoform b [Homo sapiens]
          Length = 181

 Score = 92.8 bits (229), Expect = 7e-20
 Identities = 52/99 (52%), Positives = 67/99 (67%), Gaps = 11/99 (11%)

Query: 1   METQADLVSQEPQALLDSALPS---------KVPAFSDKDSLGDEMLAAALLKAKSQELV 51
           +ETQ++ +S EPQ + D+ +           +VPA   + S GD+  AAALL A+ QE V
Sbjct: 20  LETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGSPGDQ--AAALLTARYQEFV 77

Query: 52  TFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
           TFEDVAV+  R+EW  L+P QRDLYR+VMLENYGNV SL
Sbjct: 78  TFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116


>gi|13129036 zinc finger protein 655 isoform b [Homo sapiens]
          Length = 181

 Score = 92.8 bits (229), Expect = 7e-20
 Identities = 52/99 (52%), Positives = 67/99 (67%), Gaps = 11/99 (11%)

Query: 1   METQADLVSQEPQALLDSALPS---------KVPAFSDKDSLGDEMLAAALLKAKSQELV 51
           +ETQ++ +S EPQ + D+ +           +VPA   + S GD+  AAALL A+ QE V
Sbjct: 20  LETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGSPGDQ--AAALLTARYQEFV 77

Query: 52  TFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
           TFEDVAV+  R+EW  L+P QRDLYR+VMLENYGNV SL
Sbjct: 78  TFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116


>gi|116089280 zinc finger protein 436 [Homo sapiens]
          Length = 470

 Score = 76.3 bits (186), Expect = 7e-15
 Identities = 37/55 (67%), Positives = 44/55 (80%)

Query: 38 LAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
          +AA LL A SQ  VTFED+A+Y  R+EW+ L+ AQRDLYRDVM ENYGNV SLD+
Sbjct: 1  MAATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDF 55


>gi|20336724 zinc finger protein 333 [Homo sapiens]
          Length = 665

 Score = 76.3 bits (186), Expect = 7e-15
 Identities = 40/81 (49%), Positives = 53/81 (65%)

Query: 10  QEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLE 69
           + P    DSA+P++ PA+  +D + +E +A  L  A SQE VTF DVAV F  +EW  L+
Sbjct: 162 RNPWVARDSAVPARDPAWLQEDKVEEEAMAPGLPTACSQEPVTFADVAVVFTPEEWVFLD 221

Query: 70  PAQRDLYRDVMLENYGNVFSL 90
             QR LYRDVMLENY N+ S+
Sbjct: 222 STQRSLYRDVMLENYRNLASV 242



 Score = 33.5 bits (75), Expect = 0.049
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 49 ELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLE 82
          E VTFEDVAV FI +EW  L+ A+R L +  ML+
Sbjct: 2  ESVTFEDVAVEFI-QEWALLDSARRSLCKYRMLD 34


>gi|24308299 zinc finger protein 436 [Homo sapiens]
          Length = 470

 Score = 76.3 bits (186), Expect = 7e-15
 Identities = 37/55 (67%), Positives = 44/55 (80%)

Query: 38 LAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
          +AA LL A SQ  VTFED+A+Y  R+EW+ L+ AQRDLYRDVM ENYGNV SLD+
Sbjct: 1  MAATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDF 55


>gi|11386193 zinc finger protein 197 isoform 1 [Homo sapiens]
          Length = 1029

 Score = 75.9 bits (185), Expect = 9e-15
 Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 6/90 (6%)

Query: 6   DLVS---QEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIR 62
           DLV+   Q+PQ   DS  P +  A S +++  ++++A  LL A+ QELV FE+V+V F  
Sbjct: 172 DLVAFNLQDPQH--DSPAP-EASALSQEENPRNQLMALMLLTAQPQELVMFEEVSVCFTS 228

Query: 63  KEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
           +EW  L P QR LY DVMLENYGNV SL+W
Sbjct: 229 EEWACLGPIQRALYWDVMLENYGNVTSLEW 258


>gi|72384335 zinc finger protein 311 [Homo sapiens]
          Length = 666

 Score = 75.5 bits (184), Expect = 1e-14
 Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 1/82 (1%)

Query: 10  QEPQALLDSAL-PSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRL 68
           Q+ Q   +SAL P+  PAF+   S G+   A   L +++QE VTFEDVAV F  +EW+ L
Sbjct: 22  QDTQLPQESALLPAPYPAFTKDGSQGNLPQADITLMSQAQESVTFEDVAVNFTNREWQCL 81

Query: 69  EPAQRDLYRDVMLENYGNVFSL 90
             AQR LY+DVMLENYGN+ SL
Sbjct: 82  TYAQRHLYKDVMLENYGNMVSL 103


>gi|156627557 zinc finger protein 554 [Homo sapiens]
          Length = 538

 Score = 74.7 bits (182), Expect = 2e-14
 Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 7/81 (8%)

Query: 13 QALLDSALPSKVPA--FSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEP 70
          +A L +A PS  P   FS      +E +AA  L   SQELVTFEDV++ F ++EW+ LEP
Sbjct: 10 RARLPAAQPSACPGTCFSQ-----EERMAAGYLPRWSQELVTFEDVSMDFSQEEWELLEP 64

Query: 71 AQRDLYRDVMLENYGNVFSLD 91
          AQ++LYR+VMLENY NV SL+
Sbjct: 65 AQKNLYREVMLENYRNVVSLE 85


>gi|157954634 zinc finger protein 34 [Homo sapiens]
          Length = 560

 Score = 71.6 bits (174), Expect = 2e-13
 Identities = 36/55 (65%), Positives = 40/55 (72%)

Query: 36 EMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
          + +AA  L A  Q  VTFEDVAVY  R+EW RL PAQR LYRDVMLE YGN+ SL
Sbjct: 20 QAMAALFLSAPPQAEVTFEDVAVYLSREEWGRLGPAQRGLYRDVMLETYGNLVSL 74


>gi|68800230 zinc finger protein 197 isoform 2 [Homo sapiens]
          Length = 267

 Score = 71.2 bits (173), Expect = 2e-13
 Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 6/90 (6%)

Query: 6   DLVS---QEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIR 62
           DLV+   Q+PQ   DS  P +  A S +++  ++++A  LL A+ QELV FE+V+V F  
Sbjct: 172 DLVAFNLQDPQH--DSPAP-EASALSQEENPRNQLMALMLLTAQPQELVMFEEVSVCFTS 228

Query: 63  KEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
           +EW  L P QR LY DVMLENYGNV SL +
Sbjct: 229 EEWACLGPIQRALYWDVMLENYGNVTSLGY 258


>gi|38045956 zinc finger protein 19 [Homo sapiens]
          Length = 458

 Score = 70.9 bits (172), Expect = 3e-13
 Identities = 34/55 (61%), Positives = 43/55 (78%)

Query: 38 LAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
          +AA  LKA+ QE+VTFEDVAV+F + EW  L PAQR LYR VMLEN+GN+ +L +
Sbjct: 1  MAAMPLKAQYQEMVTFEDVAVHFTKTEWTGLSPAQRALYRSVMLENFGNLTALGY 55


>gi|89001105 zinc finger protein 571 [Homo sapiens]
          Length = 609

 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 32/49 (65%), Positives = 39/49 (79%)

Query: 50 LVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCLT 98
          LVTF DVA+ F ++EW+ L+PAQRDLYRDVMLENY N+ SLD    C+T
Sbjct: 5  LVTFRDVAIDFSQEEWECLDPAQRDLYRDVMLENYSNLISLDLESSCVT 53


>gi|37693525 zinc finger protein 189 isoform 1 [Homo sapiens]
          Length = 626

 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 30/46 (65%), Positives = 40/46 (86%)

Query: 46 KSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLD 91
          +S+ L+TFEDVAV+F ++EW  L+PAQR LY+DVM+ENYGN+ SLD
Sbjct: 9  ESKGLLTFEDVAVFFTQEEWDYLDPAQRSLYKDVMMENYGNLVSLD 54


>gi|209954795 zinc finger protein 761 [Homo sapiens]
          Length = 746

 Score = 68.2 bits (165), Expect = 2e-12
 Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 45  AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCLTTQKVML 104
           A SQ L+TF DVA+ F ++EWK L+PAQR LYRDVMLENY N+ SLD    C  T K  L
Sbjct: 2   AFSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKC--TMKEFL 59

Query: 105 AWLTGTLSV 113
           +   G   V
Sbjct: 60  STAQGNREV 68


>gi|210031219 zinc finger protein 845 [Homo sapiens]
          Length = 970

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 33/53 (62%), Positives = 40/53 (75%)

Query: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCL 97
          A SQ L+TF DVA+ F ++EWK L+PAQR LYRDVMLENY N+ SLD    C+
Sbjct: 2  ALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCM 54


>gi|61676195 zinc finger protein 320 [Homo sapiens]
          Length = 509

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 33/53 (62%), Positives = 40/53 (75%)

Query: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCL 97
          A SQ L+TF DVA+ F ++EWK L+PAQR LYRDVMLENY N+ SLD    C+
Sbjct: 2  ALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCM 54


>gi|37537689 zinc finger protein 354A [Homo sapiens]
          Length = 605

 Score = 67.4 bits (163), Expect = 3e-12
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 38 LAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
          +AA   +A+ Q  +TFEDVAV F R EW++L P+QR+LYRDVMLENY N+ SL
Sbjct: 1  MAAGQREARPQVSLTFEDVAVLFTRDEWRKLAPSQRNLYRDVMLENYRNLVSL 53


>gi|116875834 zinc finger protein 74 [Homo sapiens]
          Length = 644

 Score = 67.0 bits (162), Expect = 4e-12
 Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 4/85 (4%)

Query: 6  DLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEW 65
          ++ + EP+    +AL S+ PA S K++L D +    L +A+S+E V+F+DVAV F ++EW
Sbjct: 2  EIPAPEPEK---TALSSQDPALSLKENLED-ISGWGLPEARSKESVSFKDVAVDFTQEEW 57

Query: 66 KRLEPAQRDLYRDVMLENYGNVFSL 90
           +L+  QR LYRDVMLENY N+ +L
Sbjct: 58 GQLDSPQRALYRDVMLENYQNLLAL 82


>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
          Length = 839

 Score = 67.0 bits (162), Expect = 4e-12
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 7/96 (7%)

Query: 1   METQADLVSQEPQALLDSALPS-KVPAFSDKDSLGDEMLAAALLKAKSQELVTFE---DV 56
           ++TQ +   Q+P+ L ++ALP  +VP+   KDS   + L A+LL   SQ+LV  E   DV
Sbjct: 167 VDTQPEQAPQKPRLLEENALPVLQVPSLPLKDS---QELTASLLSTGSQKLVKIEEVADV 223

Query: 57  AVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
           AV FI +EW  L+ +Q+ LYRD   ENYG++ S+ +
Sbjct: 224 AVSFILEEWGHLDQSQKSLYRDDRKENYGSITSMGY 259


>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
          Length = 839

 Score = 67.0 bits (162), Expect = 4e-12
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 7/96 (7%)

Query: 1   METQADLVSQEPQALLDSALPS-KVPAFSDKDSLGDEMLAAALLKAKSQELVTFE---DV 56
           ++TQ +   Q+P+ L ++ALP  +VP+   KDS   + L A+LL   SQ+LV  E   DV
Sbjct: 167 VDTQPEQAPQKPRLLEENALPVLQVPSLPLKDS---QELTASLLSTGSQKLVKIEEVADV 223

Query: 57  AVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
           AV FI +EW  L+ +Q+ LYRD   ENYG++ S+ +
Sbjct: 224 AVSFILEEWGHLDQSQKSLYRDDRKENYGSITSMGY 259


>gi|153792259 zinc finger protein 778 [Homo sapiens]
          Length = 729

 Score = 67.0 bits (162), Expect = 4e-12
 Identities = 29/45 (64%), Positives = 38/45 (84%)

Query: 48 QELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDW 92
          Q+ VTF+DVAV F ++EW  L+P+QRDLYRDVMLENY N+ S++W
Sbjct: 39 QDAVTFDDVAVDFTQEEWTLLDPSQRDLYRDVMLENYENLASVEW 83


>gi|169213999 PREDICTED: similar to hCG1778601 isoform 1 [Homo
          sapiens]
          Length = 700

 Score = 66.6 bits (161), Expect = 5e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIH 94
          A  Q L+TF DVA+ F ++EWK L+PAQR LYRDVMLENY N+ SL+ IH
Sbjct: 2  ALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLEVIH 51


>gi|169214410 PREDICTED: similar to hCG1778601 isoform 1 [Homo
          sapiens]
          Length = 700

 Score = 66.6 bits (161), Expect = 5e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIH 94
          A  Q L+TF DVA+ F ++EWK L+PAQR LYRDVMLENY N+ SL+ IH
Sbjct: 2  ALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLEVIH 51


>gi|169213416 PREDICTED: hypothetical protein LOC388559 [Homo
          sapiens]
          Length = 700

 Score = 66.6 bits (161), Expect = 5e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIH 94
          A  Q L+TF DVA+ F ++EWK L+PAQR LYRDVMLENY N+ SL+ IH
Sbjct: 2  ALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLEVIH 51


>gi|22748701 zinc finger protein 641 [Homo sapiens]
          Length = 438

 Score = 66.6 bits (161), Expect = 5e-12
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 2/85 (2%)

Query: 8   VSQEPQALLDSALPSK-VPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWK 66
           + +EPQ+L + A  +  VPA   + + GD  +AAALL A SQ LVT +DV++ F ++EW+
Sbjct: 65  LEEEPQSLQEKAQSAPWVPAIPQEGNTGDWEMAAALLAAGSQGLVTIKDVSLCFSQEEWR 124

Query: 67  RLEPAQRDLYRD-VMLENYGNVFSL 90
            L+P+Q D Y + VM EN G V SL
Sbjct: 125 SLDPSQTDFYGEYVMQENCGIVVSL 149


>gi|8922744 zinc finger protein 701 [Homo sapiens]
          Length = 465

 Score = 66.2 bits (160), Expect = 7e-12
 Identities = 32/53 (60%), Positives = 39/53 (73%)

Query: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWIHVCL 97
          A  Q L+TF DVA+ F ++EWK L+PAQR LYRDVMLENY N+ SLD    C+
Sbjct: 2  ALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDTSSKCM 54


>gi|125490356 zinc finger protein 517 [Homo sapiens]
          Length = 492

 Score = 66.2 bits (160), Expect = 7e-12
 Identities = 34/56 (60%), Positives = 39/56 (69%)

Query: 38 LAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDWI 93
          +A AL     QE V FEDVAVYF R EW  L P Q+ LYRDVMLENYGN+ SL ++
Sbjct: 1  MAMALPMPGPQEAVVFEDVAVYFTRIEWSCLAPDQQALYRDVMLENYGNLASLGFL 56


>gi|149192841 zinc finger protein 527 [Homo sapiens]
          Length = 609

 Score = 65.9 bits (159), Expect = 9e-12
 Identities = 31/50 (62%), Positives = 40/50 (80%)

Query: 38 LAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNV 87
          +A  L KA SQ LVTF DVA+ F ++EW+ L+P+Q+DLYRDVMLENY N+
Sbjct: 1  MAVGLCKAMSQGLVTFRDVALDFSQEEWEWLKPSQKDLYRDVMLENYRNL 50


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,739,305
Number of Sequences: 37866
Number of extensions: 164277
Number of successful extensions: 1059
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 504
Number of HSP's gapped (non-prelim): 549
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press