Guide to the Human Genome
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Name: ZNF3 Sequence: fasta or formatted (131aa) NCBI GI: 122114649
Description:

zinc finger protein 3 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [446aa] zinc finger protein 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         13           3
 C cysteine            1.5          2           1
 D aspartate           7.6         10           1
 E glutamate           7.6         10           1
 F phenylalanine       3.8          5           1
 G glycine             3.1          4           1
 H histidine           0.8          1           1
 I isoleucine          1.5          2           1
 K lysine              6.1          8           1
 L leucine            14.5         19           2
 M methionine          3.1          4           1
 N asparagine          1.5          2           1
 P proline             4.6          6           2
 Q glutamine           4.6          6           1
 R arginine            3.1          4           1
 S serine              8.4         11           2
 T threonine           5.3          7           2
 V valine              8.4         11           1
 W tryptophan          2.3          3           1
 Y tyrosine            2.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 3 isoform 1 
ZNF3                  0.653   zinc finger protein 3 isoform 2 
ZNF655                0.288   zinc finger protein 655 isoform b 
ZNF655                0.288   zinc finger protein 655 isoform b 
ZNF436                0.216   zinc finger protein 436 
ZNF333                0.216   zinc finger protein 333 
ZNF436                0.216   zinc finger protein 436 
ZNF197                0.216   zinc finger protein 197 isoform 1 
ZNF311                0.212   zinc finger protein 311 
ZNF554                0.212   zinc finger protein 554 
ZNF34                 0.199   zinc finger protein 34 
ZNF197                0.195   zinc finger protein 197 isoform 2 
ZNF19                 0.195   zinc finger protein 19 
ZNF571                0.186   zinc finger protein 571 
ZNF189                0.186   zinc finger protein 189 isoform 1 
ZNF761                0.182   zinc finger protein 761 
ZNF845                0.182   zinc finger protein 845 
ZNF320                0.182   zinc finger protein 320 
ZNF354A               0.178   zinc finger protein 354A 
ZNF74                 0.178   zinc finger protein 74 
ZKSCAN5               0.178   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.178   zinc finger with KRAB and SCAN domains 5 
ZNF778                0.178   zinc finger protein 778 
LOC388559             0.178   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.178   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.178   PREDICTED: hypothetical protein LOC388559 
ZNF641                0.178   zinc finger protein 641 
ZNF701                0.174   zinc finger protein 701 
ZNF517                0.174   zinc finger protein 517 
ZNF527                0.174   zinc finger protein 527 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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