LOC388559 8934

Name: LOC388559	Sequence: fasta or formatted (700aa)		NCBI GI: 169213999
Description: PREDICTED: similar to hCG1778601 isoform 1		Referenced in: Kruppel-related Zinc Finger Proteins
Other entries for this name: alt mRNA [700aa] PREDICTED: hypothetical protein LOC388559 alt mRNA [700aa] PREDICTED: similar to hCG1778601 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 27 1 C cysteine 6.0 42 2 D aspartate 3.3 23 1 E glutamate 7.3 51 2 F phenylalanine 4.4 31 2 G glycine 5.9 41 1 H histidine 8.7 61 2 I isoleucine 3.9 27 2 K lysine 11.7 82 2 L leucine 6.0 42 2 M methionine 0.7 5 1 N asparagine 4.4 31 2 P proline 3.1 22 1 Q glutamine 4.9 34 2 R arginine 6.0 42 2 S serine 6.1 43 2 T threonine 5.1 36 1 V valine 4.3 30 1 W tryptophan 0.3 2 1 Y tyrosine 4.0 28 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1778601 isoform 1 LOC388559 1.000 PREDICTED: similar to hCG1778601 isoform 1 LOC388559 1.000 PREDICTED: hypothetical protein LOC388559 ZNF845 0.687 zinc finger protein 845 ZNF808 0.652 zinc finger protein 808 ZNF761 0.649 zinc finger protein 761 ZNF600 0.636 zinc finger protein 600 ZNF28 0.631 zinc finger protein 28 ZNF611 0.613 zinc finger protein 611 isoform a ZNF611 0.613 zinc finger protein 611 isoform a ZNF611 0.613 zinc finger protein 611 isoform a ZNF813 0.579 zinc finger protein 813 ZNF816A 0.575 zinc finger protein 816A ZNF611 0.570 zinc finger protein 611 isoform b ZNF665 0.537 zinc finger protein 665 ZNF616 0.524 zinc finger protein 616 ZNF836 0.524 zinc finger protein 836 ZNF578 0.520 zinc finger protein 578 ZNF160 0.514 zinc finger protein 160 ZNF160 0.514 zinc finger protein 160 ZNF160 0.514 zinc finger protein 160 ZNF347 0.511 zinc finger protein 347 ZNF860 0.501 zinc finger protein 860 ZNF765 0.488 zinc finger protein 765 ZNF841 0.476 zinc finger protein 841 ZNF534 0.474 zinc finger protein 534 isoform 1 ZNF468 0.473 zinc finger protein ZNF468 isoform 2 ZNF534 0.473 zinc finger protein 534 isoform 2 ZNF420 0.467 zinc finger protein 420 ZNF701 0.457 zinc finger protein 701 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.